2025-09-05T12:55:59,957 Created temporary directory: /tmp/pip-build-tracker-n_bcjow0 2025-09-05T12:55:59,958 Initialized build tracking at /tmp/pip-build-tracker-n_bcjow0 2025-09-05T12:55:59,958 Created build tracker: /tmp/pip-build-tracker-n_bcjow0 2025-09-05T12:55:59,958 Entered build tracker: /tmp/pip-build-tracker-n_bcjow0 2025-09-05T12:55:59,958 Created temporary directory: /tmp/pip-wheel-zli9wewr 2025-09-05T12:55:59,962 Created temporary directory: /tmp/pip-ephem-wheel-cache-fct0nwn0 2025-09-05T12:56:00,019 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-05T12:56:00,021 2 location(s) to search for versions of forgi: 2025-09-05T12:56:00,021 * https://pypi.org/simple/forgi/ 2025-09-05T12:56:00,021 * https://www.piwheels.org/simple/forgi/ 2025-09-05T12:56:00,021 Fetching project page and analyzing links: https://pypi.org/simple/forgi/ 2025-09-05T12:56:00,022 Getting page https://pypi.org/simple/forgi/ 2025-09-05T12:56:00,023 Found index url https://pypi.org/simple/ 2025-09-05T12:56:00,093 Fetched page https://pypi.org/simple/forgi/ as application/vnd.pypi.simple.v1+json 2025-09-05T12:56:00,096 Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/66/40/1e40afc410037da78b10b08eb1f681c3c4d4514abf774f93f255b9746b90/forgi-0.1.linux-x86_64.exe (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,096 Found link https://files.pythonhosted.org/packages/e7/1a/d38508a857d7ac4c4e75464529fa9834bbaf96078e62d6b93e831c86c0bb/forgi-0.1.tar.gz (from https://pypi.org/simple/forgi/), version: 0.1 2025-09-05T12:56:00,097 Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/26/0f/024735a6e6d3077c5bfb5cfc2c398a66d293e4a6192ee88357edbeb66f09/forgi-0.20.linux-x86_64.exe (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,097 Found link https://files.pythonhosted.org/packages/f8/47/5b68cdb14c10ff946b7b53d130dbf644cdcb8663aee0f4a7a467094fa8e9/forgi-0.20.tar.gz (from https://pypi.org/simple/forgi/), version: 0.20 2025-09-05T12:56:00,097 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/e4/70/94d2e42b6a8f96fd38e57fe1d3cc05335ac2e7e3b6599223701321356e0e/forgi-1.0-py2.py3-none-any.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,097 Found link https://files.pythonhosted.org/packages/16/4e/a9b9cb9341a045b4febd75549314df78b7a09e801bdb835b10576b938b9d/forgi-1.0.tar.gz (from https://pypi.org/simple/forgi/), version: 1.0 2025-09-05T12:56:00,097 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/86/f7/812cba6327ac40a33d986b7d698a6d2193e64e7dfcd570abc6b4f86aede5/forgi-1.1-py2.py3-none-any.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,097 Found link https://files.pythonhosted.org/packages/61/29/273df63c66c18e8909aff10f66e9406f598f656659894405b1ad10b20654/forgi-1.1.tar.gz (from https://pypi.org/simple/forgi/), version: 1.1 2025-09-05T12:56:00,098 Found link https://files.pythonhosted.org/packages/69/94/583f97307ee7c68d8b3844c2171dd13d79aa64d38a4f05e7847bd7d98e28/forgi-2.0.1.tar.gz (from https://pypi.org/simple/forgi/), version: 2.0.1 2025-09-05T12:56:00,098 Found link https://files.pythonhosted.org/packages/ea/95/2fdfc3636ce7957d2581ef9813cd49af123afd718c4bcb41486dadd5babc/forgi-2.0.2.tar.gz (from https://pypi.org/simple/forgi/), version: 2.0.2 2025-09-05T12:56:00,098 Found link https://files.pythonhosted.org/packages/61/6d/54b072d5cb0acb992b981772e33d7f7a0dca1f4e7bbc1e5c799fa0eb380d/forgi-2.1.1.tar.gz (from https://pypi.org/simple/forgi/), version: 2.1.1 2025-09-05T12:56:00,098 Found link https://files.pythonhosted.org/packages/bb/50/206944d64095dd07960398f5d350a00c96e7f29689c64ae559292ba7cd20/forgi-2.1.2.tar.gz (from https://pypi.org/simple/forgi/), version: 2.1.2 2025-09-05T12:56:00,098 Found link https://files.pythonhosted.org/packages/cd/d8/31485b259d48619ff38ea6aa48ac2e5a04bd069a41846f2bc5b6b3d8b740/forgi-2.2.0.tar.gz (from https://pypi.org/simple/forgi/), version: 2.2.0 2025-09-05T12:56:00,099 Found link https://files.pythonhosted.org/packages/6b/6c/0767b9c276049346a1d6cc262d0adc99cda5a9eef64b590840677adf08ad/forgi-2.2.1.tar.gz (from https://pypi.org/simple/forgi/), version: 2.2.1 2025-09-05T12:56:00,099 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/41/96/74f23211eae17a7c2bd9b5683a4affa73e0197de09f081786c44839a3b86/forgi-2.2.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,099 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/c0/1f/80dfe394416cb3001586ef7f89203ea3e89ff4ecd27025927efeb6e52185/forgi-2.2.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,099 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/64/9e/ff9b8e397f4422341d493659e4fd298e257869eba6f42ef30b640f565c04/forgi-2.2.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,099 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/4d/87/785b11d57bf235cf35de5eae23b455a5281de184d08265a256a0c375bf39/forgi-2.2.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,099 Found link https://files.pythonhosted.org/packages/15/04/70c9e02d6c1cdd4a645f890411cc9cc346945d3fd4297c51185a883e042e/forgi-2.2.2.tar.gz (from https://pypi.org/simple/forgi/), version: 2.2.2 2025-09-05T12:56:00,100 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/d4/52/d6db1b63fa768fff0e8391993b1268b785f9937a6d3b5af76fdf3bfcf2db/forgi-2.2.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,100 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/9f/36/87d4606643d588a1a472e16b8365a20c4cfa83857b321b98e809d4597319/forgi-2.2.3-cp311-cp311-manylinux_2_24_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,100 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/af/70/dea14557281b0a9427b9c6dd145bff00df18eeeb980634b6f14525326bff/forgi-2.2.3-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,100 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/c0/45/2c9cd672e2622ddba2323562db375783bb28dee1d9510ab70743d0308012/forgi-2.2.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,100 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/15/01/129655179fece949a98d94db022177c52af1a53d8db3a38d1beeb4009a94/forgi-2.2.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,100 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/1b/a1/d5082a78a51b95d3ce654c21b6e14101ab1b7dcb583ce63a56502918959a/forgi-2.2.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,100 Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/77/d5/086e3c8d5be2b8478bc84090c7a7b5adfd0900f5ce7a4be0cbe6ca5eebea/forgi-2.2.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/) 2025-09-05T12:56:00,100 Found link https://files.pythonhosted.org/packages/52/6b/743f2dd63c17845cfac90ad996932c4da691c0a600b07b0937301b2933cb/forgi-2.2.3.tar.gz (from https://pypi.org/simple/forgi/), version: 2.2.3 2025-09-05T12:56:00,101 Fetching project page and analyzing links: https://www.piwheels.org/simple/forgi/ 2025-09-05T12:56:00,101 Getting page https://www.piwheels.org/simple/forgi/ 2025-09-05T12:56:00,102 Found index url https://www.piwheels.org/simple/ 2025-09-05T12:56:00,197 Fetched page https://www.piwheels.org/simple/forgi/ as text/html 2025-09-05T12:56:00,204 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.3-cp311-cp311-linux_armv6l.whl#sha256=b027f5e7b0f7b46db75366c151b91416ed29ef1f6190489eb63d081d71ff6a67 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,204 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.3-cp311-cp311-linux_armv7l.whl#sha256=b027f5e7b0f7b46db75366c151b91416ed29ef1f6190489eb63d081d71ff6a67 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,204 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.3-cp37-cp37m-linux_armv6l.whl#sha256=8468ee2dcd344b3bb6315e4406433334f1cd884c2787504fc8bbfc63c4ed6cf6 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,204 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.3-cp37-cp37m-linux_armv7l.whl#sha256=8468ee2dcd344b3bb6315e4406433334f1cd884c2787504fc8bbfc63c4ed6cf6 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,205 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.3-cp39-cp39-linux_armv6l.whl#sha256=16d857958089fdb4da47c7bcbdb6468c0ed18945fc6e9005e3e2a62cb2b0cda3 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,205 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.3-cp39-cp39-linux_armv7l.whl#sha256=16d857958089fdb4da47c7bcbdb6468c0ed18945fc6e9005e3e2a62cb2b0cda3 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,205 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.2-cp39-cp39-linux_armv6l.whl#sha256=5d0330ff6aa2005e316c859df18383e5edc15ef2a55219d65fbd44614699955f (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,205 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.2-cp39-cp39-linux_armv7l.whl#sha256=5d0330ff6aa2005e316c859df18383e5edc15ef2a55219d65fbd44614699955f (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,205 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.2-cp37-cp37m-linux_armv6l.whl#sha256=4fd5cad6f7136b0688788fb72048f1db223ca322d71fd82290526b5e24638e90 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,205 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.2-cp37-cp37m-linux_armv7l.whl#sha256=4fd5cad6f7136b0688788fb72048f1db223ca322d71fd82290526b5e24638e90 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,205 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.1-cp37-cp37m-linux_armv6l.whl#sha256=e18b86582585f10c731579fb798ccdd9c07b446511f4285502befb39c9e03ab1 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,205 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.1-cp37-cp37m-linux_armv7l.whl#sha256=e18b86582585f10c731579fb798ccdd9c07b446511f4285502befb39c9e03ab1 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,206 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.0-cp37-cp37m-linux_armv6l.whl#sha256=ccd711cccc31d4e49f3d8d88cc5459d7c6c496890a1e651df48a024e1a9675ae (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,206 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.2.0-cp37-cp37m-linux_armv7l.whl#sha256=ccd711cccc31d4e49f3d8d88cc5459d7c6c496890a1e651df48a024e1a9675ae (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,206 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.1.2-cp35-cp35m-linux_armv6l.whl#sha256=c2780f924bfbbbf78b23f481945f17f1232cf043138502c8a7242dd9c04310ba (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,206 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.1.2-cp35-cp35m-linux_armv7l.whl#sha256=c2780f924bfbbbf78b23f481945f17f1232cf043138502c8a7242dd9c04310ba (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,206 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.1.2-cp37-cp37m-linux_armv6l.whl#sha256=09ed6e7a446e5f1d34b68e7af188265e09b6bd4d51dc84c7d0d190a08966fb79 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,206 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.1.2-cp37-cp37m-linux_armv7l.whl#sha256=09ed6e7a446e5f1d34b68e7af188265e09b6bd4d51dc84c7d0d190a08966fb79 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,206 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.1.2-cp39-cp39-linux_armv6l.whl#sha256=4d8967854ad1577550cea92b6474561726648c605f63ab598218f7ee1c21b1ee (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,206 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.1.2-cp39-cp39-linux_armv7l.whl#sha256=4d8967854ad1577550cea92b6474561726648c605f63ab598218f7ee1c21b1ee (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,207 Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp313-cp313-linux_armv6l.whl#sha256=bc49e7c03c0b590875d66e0f274ed0244251dc63dac3e335a9b8108322cb8c8d (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,207 Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp313-cp313-linux_armv7l.whl#sha256=bc49e7c03c0b590875d66e0f274ed0244251dc63dac3e335a9b8108322cb8c8d (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,207 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.2-cp39-cp39-linux_armv6l.whl#sha256=d547df152ca5cc919761e6a071515f4e97830ffae817158ec9fa1399382d1761 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,207 Skipping link: No binaries permitted for forgi: 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https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,207 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.2-cp37-cp37m-linux_armv6l.whl#sha256=f26a2514fd959f03f692bd823ce87ed95de9f2769ddb5386a39afb945d7c7b17 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.2-cp37-cp37m-linux_armv7l.whl#sha256=f26a2514fd959f03f692bd823ce87ed95de9f2769ddb5386a39afb945d7c7b17 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=e96b8376cebbb6f9a9b49d8d88a027e58f790aada95f37814c7cf8fab8f7a606 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=e96b8376cebbb6f9a9b49d8d88a027e58f790aada95f37814c7cf8fab8f7a606 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.1-cp35-cp35m-linux_armv6l.whl#sha256=261b20a637cc9b006dcb9866174c2d3c4cfa0f0375bd1aa38950c8ccd867dcdd (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.1-cp35-cp35m-linux_armv7l.whl#sha256=261b20a637cc9b006dcb9866174c2d3c4cfa0f0375bd1aa38950c8ccd867dcdd (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.1-cp37-cp37m-linux_armv6l.whl#sha256=5917ef47b38ba9bd489d8299f12812ea7a17d8f10783e0fe4c4f184a2bae3018 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-2.0.1-cp37-cp37m-linux_armv7l.whl#sha256=5917ef47b38ba9bd489d8299f12812ea7a17d8f10783e0fe4c4f184a2bae3018 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-1.1-py2.py3-none-any.whl#sha256=a13ed8456dad061d5c5f05609847f58aa713a49993e7923dceadb036dfb92f54 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,208 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-1.0-py2.py3-none-any.whl#sha256=d5f6c5bad4475c9a6820816e07d9c2bea6ee364c9f45ea6214cc55e18513e381 (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,209 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-0.20-py3-none-any.whl#sha256=fe868f38af84d0ed687e6344436930f427f9d154975e10cac9d5ff634a40d16a (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,209 Skipping link: No binaries permitted for forgi: https://archive1.piwheels.org/simple/forgi/forgi-0.1-py3-none-any.whl#sha256=74cf37eb8412b8c4a6cc74b32257f5257d71148ad9051c4d9227b689036c1adf (from https://www.piwheels.org/simple/forgi/) 2025-09-05T12:56:00,209 Skipping link: not a file: https://www.piwheels.org/simple/forgi/ 2025-09-05T12:56:00,209 Skipping link: not a file: https://pypi.org/simple/forgi/ 2025-09-05T12:56:00,234 Given no hashes to check 1 links for project 'forgi': discarding no candidates 2025-09-05T12:56:00,235 Collecting forgi==2.2.1 2025-09-05T12:56:00,237 Created temporary directory: /tmp/pip-unpack-esqcyzlq 2025-09-05T12:56:00,393 Downloading forgi-2.2.1.tar.gz (26.7 MB) 2025-09-05T12:56:06,251 Added forgi==2.2.1 from https://files.pythonhosted.org/packages/6b/6c/0767b9c276049346a1d6cc262d0adc99cda5a9eef64b590840677adf08ad/forgi-2.2.1.tar.gz to build tracker '/tmp/pip-build-tracker-n_bcjow0' 2025-09-05T12:56:06,252 Running setup.py (path:/tmp/pip-wheel-zli9wewr/forgi_df09790f1ee04447ad7ba2a0e68f22de/setup.py) egg_info for package forgi 2025-09-05T12:56:06,253 Created temporary directory: /tmp/pip-pip-egg-info-ncrbcloj 2025-09-05T12:56:06,253 Preparing metadata (setup.py): started 2025-09-05T12:56:06,254 Running command python setup.py egg_info 2025-09-05T12:56:06,982 fatal: not a git repository (or any parent up to mount point /) 2025-09-05T12:56:06,982 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-05T12:56:07,108 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-05T12:56:07,108 !! 2025-09-05T12:56:07,108 ******************************************************************************** 2025-09-05T12:56:07,108 Requirements should be satisfied by a PEP 517 installer. 2025-09-05T12:56:07,108 If you are using pip, you can try `pip install --use-pep517`. 2025-09-05T12:56:07,108 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-05T12:56:07,109 or your builds will no longer be supported. 2025-09-05T12:56:07,109 ******************************************************************************** 2025-09-05T12:56:07,109 !! 2025-09-05T12:56:07,109 dist.fetch_build_eggs(dist.setup_requires) 2025-09-05T12:56:07,479 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-05T12:56:07,479 !! 2025-09-05T12:56:07,480 ******************************************************************************** 2025-09-05T12:56:07,480 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-05T12:56:07,480 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-09-05T12:56:07,480 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-05T12:56:07,480 ******************************************************************************** 2025-09-05T12:56:07,480 !! 2025-09-05T12:56:07,480 self._finalize_license_expression() 2025-09-05T12:56:07,556 INFO:root:running egg_info 2025-09-05T12:56:07,631 INFO:root:creating /tmp/pip-pip-egg-info-ncrbcloj/forgi.egg-info 2025-09-05T12:56:07,631 INFO:root:writing /tmp/pip-pip-egg-info-ncrbcloj/forgi.egg-info/PKG-INFO 2025-09-05T12:56:07,638 INFO:root:writing dependency_links to /tmp/pip-pip-egg-info-ncrbcloj/forgi.egg-info/dependency_links.txt 2025-09-05T12:56:07,642 INFO:root:writing requirements to /tmp/pip-pip-egg-info-ncrbcloj/forgi.egg-info/requires.txt 2025-09-05T12:56:07,642 INFO:root:writing top-level names to /tmp/pip-pip-egg-info-ncrbcloj/forgi.egg-info/top_level.txt 2025-09-05T12:56:07,643 INFO:root:writing manifest file '/tmp/pip-pip-egg-info-ncrbcloj/forgi.egg-info/SOURCES.txt' 2025-09-05T12:56:07,883 INFO:root:reading manifest file '/tmp/pip-pip-egg-info-ncrbcloj/forgi.egg-info/SOURCES.txt' 2025-09-05T12:56:07,884 INFO:root:reading manifest template 'MANIFEST.in' 2025-09-05T12:56:07,895 INFO:root:adding license file 'LICENSE' 2025-09-05T12:56:07,896 INFO:root:adding license file 'CREDITS' 2025-09-05T12:56:07,902 INFO:root:writing manifest file '/tmp/pip-pip-egg-info-ncrbcloj/forgi.egg-info/SOURCES.txt' 2025-09-05T12:56:08,019 Preparing metadata (setup.py): finished with status 'done' 2025-09-05T12:56:08,024 Source in /tmp/pip-wheel-zli9wewr/forgi_df09790f1ee04447ad7ba2a0e68f22de has version 2.2.1, which satisfies requirement forgi==2.2.1 from https://files.pythonhosted.org/packages/6b/6c/0767b9c276049346a1d6cc262d0adc99cda5a9eef64b590840677adf08ad/forgi-2.2.1.tar.gz 2025-09-05T12:56:08,024 Removed forgi==2.2.1 from https://files.pythonhosted.org/packages/6b/6c/0767b9c276049346a1d6cc262d0adc99cda5a9eef64b590840677adf08ad/forgi-2.2.1.tar.gz from build tracker '/tmp/pip-build-tracker-n_bcjow0' 2025-09-05T12:56:08,039 Created temporary directory: /tmp/pip-unpack-t73wypc4 2025-09-05T12:56:08,039 Created temporary directory: /tmp/pip-unpack-yi1wv8jz 2025-09-05T12:56:08,039 Building wheels for collected packages: forgi 2025-09-05T12:56:08,041 Created temporary directory: /tmp/pip-wheel-gh64mvlj 2025-09-05T12:56:08,041 DEPRECATION: Building 'forgi' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'forgi'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-05T12:56:08,042 Building wheel for forgi (setup.py): started 2025-09-05T12:56:08,043 Destination directory: /tmp/pip-wheel-gh64mvlj 2025-09-05T12:56:08,043 Running command python setup.py bdist_wheel 2025-09-05T12:56:08,764 fatal: not a git repository (or any parent up to mount point /) 2025-09-05T12:56:08,765 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-05T12:56:08,883 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-05T12:56:08,883 !! 2025-09-05T12:56:08,884 ******************************************************************************** 2025-09-05T12:56:08,884 Requirements should be satisfied by a PEP 517 installer. 2025-09-05T12:56:08,884 If you are using pip, you can try `pip install --use-pep517`. 2025-09-05T12:56:08,884 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-05T12:56:08,884 or your builds will no longer be supported. 2025-09-05T12:56:08,884 ******************************************************************************** 2025-09-05T12:56:08,884 !! 2025-09-05T12:56:08,885 dist.fetch_build_eggs(dist.setup_requires) 2025-09-05T12:56:09,250 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-05T12:56:09,250 !! 2025-09-05T12:56:09,251 ******************************************************************************** 2025-09-05T12:56:09,251 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-05T12:56:09,251 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-09-05T12:56:09,251 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-05T12:56:09,251 ******************************************************************************** 2025-09-05T12:56:09,251 !! 2025-09-05T12:56:09,251 self._finalize_license_expression() 2025-09-05T12:56:09,251 INFO:root:running bdist_wheel 2025-09-05T12:56:09,551 INFO:root:running build 2025-09-05T12:56:09,551 INFO:root:running build_py 2025-09-05T12:56:09,553 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi 2025-09-05T12:56:09,553 INFO:root:copying forgi/whitelist.py -> build/lib.linux-armv7l-cpython-313/forgi 2025-09-05T12:56:09,554 INFO:root:copying forgi/config.py -> build/lib.linux-armv7l-cpython-313/forgi 2025-09-05T12:56:09,554 INFO:root:copying forgi/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi 2025-09-05T12:56:09,555 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,555 INFO:root:copying forgi/graph/transform_graphs.py -> build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,556 INFO:root:copying forgi/graph/sequence.py -> build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,556 INFO:root:copying forgi/graph/residue.py -> build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,557 INFO:root:copying forgi/graph/bulge_graph.py -> build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,558 INFO:root:copying forgi/graph/_graph_construction.py -> build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,559 INFO:root:copying forgi/graph/_cofold.py -> build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,559 INFO:root:copying forgi/graph/_basegraph.py -> build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,560 INFO:root:copying forgi/graph/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/graph 2025-09-05T12:56:09,560 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/threedee 2025-09-05T12:56:09,560 INFO:root:copying forgi/threedee/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee 2025-09-05T12:56:09,561 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,562 INFO:root:copying forgi/threedee/model/transform_cg.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,562 INFO:root:copying forgi/threedee/model/stats.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,563 INFO:root:copying forgi/threedee/model/similarity.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,563 INFO:root:copying forgi/threedee/model/linecloud.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,564 INFO:root:copying forgi/threedee/model/descriptors.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,564 INFO:root:copying forgi/threedee/model/coarse_grain.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,565 INFO:root:copying forgi/threedee/model/_ensemble2.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,566 INFO:root:copying forgi/threedee/model/_ensemble.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,566 INFO:root:copying forgi/threedee/model/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/model 2025-09-05T12:56:09,567 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,567 INFO:root:copying forgi/utilities/stuff.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,568 INFO:root:copying forgi/utilities/observedDict.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,569 INFO:root:copying forgi/utilities/numbered_dotbracket.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,569 INFO:root:copying forgi/utilities/graph.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,570 INFO:root:copying forgi/utilities/exceptions.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,570 INFO:root:copying forgi/utilities/debug.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,570 INFO:root:copying forgi/utilities/containers.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,571 INFO:root:copying forgi/utilities/commandline_utils.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,571 INFO:root:copying forgi/utilities/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/utilities 2025-09-05T12:56:09,572 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,573 INFO:root:copying forgi/threedee/utilities/virtual_residues.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,573 INFO:root:copying forgi/threedee/utilities/vector.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,574 INFO:root:copying forgi/threedee/utilities/pdb.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,574 INFO:root:copying forgi/threedee/utilities/my_math.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,575 INFO:root:copying forgi/threedee/utilities/modified_res_lookup.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,576 INFO:root:copying forgi/threedee/utilities/modified_res.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,576 INFO:root:copying forgi/threedee/utilities/mcannotate.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,577 INFO:root:copying forgi/threedee/utilities/graph_pdb.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,578 INFO:root:copying forgi/threedee/utilities/average_stem_vres_atom_positions.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,578 INFO:root:copying forgi/threedee/utilities/_dssr.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,579 INFO:root:copying forgi/threedee/utilities/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/utilities 2025-09-05T12:56:09,580 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/threedee/classification 2025-09-05T12:56:09,580 INFO:root:copying forgi/threedee/classification/contact.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/classification 2025-09-05T12:56:09,580 INFO:root:copying forgi/threedee/classification/aminor.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/classification 2025-09-05T12:56:09,581 INFO:root:copying forgi/threedee/classification/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/classification 2025-09-05T12:56:09,582 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/threedee/classification/_training 2025-09-05T12:56:09,582 INFO:root:copying forgi/threedee/classification/_training/train_aminor.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/classification/_training 2025-09-05T12:56:09,582 INFO:root:copying forgi/threedee/classification/_training/aminor_training.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/classification/_training 2025-09-05T12:56:09,583 INFO:root:copying forgi/threedee/classification/_training/_parse_utils.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/classification/_training 2025-09-05T12:56:09,584 INFO:root:copying forgi/threedee/classification/_training/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/classification/_training 2025-09-05T12:56:09,584 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,585 INFO:root:copying forgi/_k2n_standalone/rna2d.py -> build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,585 INFO:root:copying forgi/_k2n_standalone/output.py -> build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,586 INFO:root:copying forgi/_k2n_standalone/knotted2nested.py -> build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,586 INFO:root:copying forgi/_k2n_standalone/knots.py -> build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,587 INFO:root:copying forgi/_k2n_standalone/dict2d.py -> build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,588 INFO:root:copying forgi/_k2n_standalone/ct_simple.py -> build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,588 INFO:root:copying forgi/_k2n_standalone/bpseq.py -> build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,589 INFO:root:copying forgi/_k2n_standalone/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/_k2n_standalone 2025-09-05T12:56:09,589 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/threedee/visual 2025-09-05T12:56:09,590 INFO:root:copying forgi/threedee/visual/pymol.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/visual 2025-09-05T12:56:09,590 INFO:root:copying forgi/threedee/visual/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/threedee/visual 2025-09-05T12:56:09,591 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/visual 2025-09-05T12:56:09,591 INFO:root:copying forgi/visual/mplotlib.py -> build/lib.linux-armv7l-cpython-313/forgi/visual 2025-09-05T12:56:09,592 INFO:root:copying forgi/visual/fornac.py -> build/lib.linux-armv7l-cpython-313/forgi/visual 2025-09-05T12:56:09,592 INFO:root:copying forgi/visual/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/visual 2025-09-05T12:56:09,593 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/projection 2025-09-05T12:56:09,593 INFO:root:copying forgi/projection/projection2d.py -> build/lib.linux-armv7l-cpython-313/forgi/projection 2025-09-05T12:56:09,594 INFO:root:copying forgi/projection/hausdorff.py -> build/lib.linux-armv7l-cpython-313/forgi/projection 2025-09-05T12:56:09,594 INFO:root:copying forgi/projection/__init__.py -> build/lib.linux-armv7l-cpython-313/forgi/projection 2025-09-05T12:56:09,603 INFO:root:creating build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,603 INFO:root:copying forgi/threedee/data/ideal_1_9_10_18.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,604 INFO:root:copying forgi/threedee/data/ideal_1_9_10_18.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,604 INFO:root:copying forgi/threedee/data/ideal_1_8_9_16.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,605 INFO:root:copying forgi/threedee/data/ideal_1_8_9_16.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,605 INFO:root:copying forgi/threedee/data/ideal_1_7_8_14.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,606 INFO:root:copying forgi/threedee/data/ideal_1_7_8_14.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,606 INFO:root:copying forgi/threedee/data/ideal_1_6_7_12.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,607 INFO:root:copying forgi/threedee/data/ideal_1_6_7_12.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,608 INFO:root:copying forgi/threedee/data/ideal_1_5_6_10.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,608 INFO:root:copying forgi/threedee/data/ideal_1_5_6_10.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,609 INFO:root:copying forgi/threedee/data/ideal_1_4_5_8.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,609 INFO:root:copying forgi/threedee/data/ideal_1_4_5_8.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,610 INFO:root:copying forgi/threedee/data/ideal_1_40_41_80.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,610 INFO:root:copying forgi/threedee/data/ideal_1_40_41_80.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,611 INFO:root:copying forgi/threedee/data/ideal_1_3_4_6.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,612 INFO:root:copying forgi/threedee/data/ideal_1_3_4_6.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,613 INFO:root:copying forgi/threedee/data/ideal_1_39_40_78.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,613 INFO:root:copying forgi/threedee/data/ideal_1_39_40_78.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,614 INFO:root:copying forgi/threedee/data/ideal_1_38_39_76.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,615 INFO:root:copying forgi/threedee/data/ideal_1_38_39_76.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,616 INFO:root:copying forgi/threedee/data/ideal_1_37_38_74.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,616 INFO:root:copying forgi/threedee/data/ideal_1_37_38_74.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,617 INFO:root:copying forgi/threedee/data/ideal_1_36_37_72.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,618 INFO:root:copying forgi/threedee/data/ideal_1_36_37_72.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,619 INFO:root:copying forgi/threedee/data/ideal_1_35_36_70.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,620 INFO:root:copying forgi/threedee/data/ideal_1_35_36_70.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,621 INFO:root:copying forgi/threedee/data/ideal_1_34_35_68.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,621 INFO:root:copying forgi/threedee/data/ideal_1_34_35_68.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,622 INFO:root:copying forgi/threedee/data/ideal_1_33_34_66.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,623 INFO:root:copying forgi/threedee/data/ideal_1_33_34_66.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,624 INFO:root:copying forgi/threedee/data/ideal_1_32_33_64.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,624 INFO:root:copying forgi/threedee/data/ideal_1_32_33_64.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,625 INFO:root:copying forgi/threedee/data/ideal_1_31_32_62.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,626 INFO:root:copying forgi/threedee/data/ideal_1_31_32_62.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,627 INFO:root:copying forgi/threedee/data/ideal_1_30_31_60.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,627 INFO:root:copying forgi/threedee/data/ideal_1_30_31_60.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,628 INFO:root:copying forgi/threedee/data/ideal_1_2_3_4.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,629 INFO:root:copying forgi/threedee/data/ideal_1_2_3_4.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,629 INFO:root:copying forgi/threedee/data/ideal_1_29_30_58.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,630 INFO:root:copying forgi/threedee/data/ideal_1_29_30_58.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,631 INFO:root:copying forgi/threedee/data/ideal_1_28_29_56.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,631 INFO:root:copying forgi/threedee/data/ideal_1_28_29_56.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,632 INFO:root:copying forgi/threedee/data/ideal_1_27_28_54.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,633 INFO:root:copying forgi/threedee/data/ideal_1_27_28_54.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,634 INFO:root:copying forgi/threedee/data/ideal_1_26_27_52.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,634 INFO:root:copying forgi/threedee/data/ideal_1_26_27_52.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,635 INFO:root:copying forgi/threedee/data/ideal_1_25_26_50.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,636 INFO:root:copying forgi/threedee/data/ideal_1_25_26_50.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,637 INFO:root:copying forgi/threedee/data/ideal_1_24_25_48.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,637 INFO:root:copying forgi/threedee/data/ideal_1_24_25_48.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,638 INFO:root:copying forgi/threedee/data/ideal_1_23_24_46.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,639 INFO:root:copying forgi/threedee/data/ideal_1_23_24_46.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,640 INFO:root:copying forgi/threedee/data/ideal_1_22_23_44.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,640 INFO:root:copying forgi/threedee/data/ideal_1_22_23_44.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,641 INFO:root:copying forgi/threedee/data/ideal_1_21_22_42.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,641 INFO:root:copying forgi/threedee/data/ideal_1_21_22_42.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,642 INFO:root:copying forgi/threedee/data/ideal_1_20_21_40.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,643 INFO:root:copying forgi/threedee/data/ideal_1_20_21_40.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,644 INFO:root:copying forgi/threedee/data/ideal_1_1_2_2.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,644 INFO:root:copying forgi/threedee/data/ideal_1_1_2_2.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,645 INFO:root:copying forgi/threedee/data/ideal_1_19_20_38.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,645 INFO:root:copying forgi/threedee/data/ideal_1_19_20_38.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,646 INFO:root:copying forgi/threedee/data/ideal_1_18_19_36.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,646 INFO:root:copying forgi/threedee/data/ideal_1_18_19_36.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,647 INFO:root:copying forgi/threedee/data/ideal_1_17_18_34.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,648 INFO:root:copying forgi/threedee/data/ideal_1_17_18_34.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,649 INFO:root:copying forgi/threedee/data/ideal_1_16_17_32.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,649 INFO:root:copying forgi/threedee/data/ideal_1_16_17_32.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,650 INFO:root:copying forgi/threedee/data/ideal_1_15_16_30.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,650 INFO:root:copying forgi/threedee/data/ideal_1_15_16_30.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,651 INFO:root:copying forgi/threedee/data/ideal_1_14_15_28.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,652 INFO:root:copying forgi/threedee/data/ideal_1_14_15_28.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,652 INFO:root:copying forgi/threedee/data/ideal_1_13_14_26.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,653 INFO:root:copying forgi/threedee/data/ideal_1_13_14_26.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,653 INFO:root:copying forgi/threedee/data/ideal_1_12_13_24.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,654 INFO:root:copying forgi/threedee/data/ideal_1_12_13_24.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,655 INFO:root:copying forgi/threedee/data/ideal_1_11_12_22.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,655 INFO:root:copying forgi/threedee/data/ideal_1_11_12_22.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,656 INFO:root:copying forgi/threedee/data/ideal_1_10_11_20.spqr.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,656 INFO:root:copying forgi/threedee/data/ideal_1_10_11_20.pdb -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,657 INFO:root:copying forgi/threedee/data/average_atom_positions.json -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:09,921 INFO:root:copying forgi/threedee/data/aminor_geometries.csv -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:10,005 INFO:root:copying forgi/threedee/data/aminor_params.json -> build/lib.linux-armv7l-cpython-313/forgi/threedee/data 2025-09-05T12:56:10,009 INFO:root:running build_ext 2025-09-05T12:56:10,562 Compiling forgi/threedee/utilities/cytvec.pyx because it changed. 2025-09-05T12:56:10,562 [1/1] Cythonizing forgi/threedee/utilities/cytvec.pyx 2025-09-05T12:56:13,968 INFO:root:building 'forgi.threedee.utilities.cytvec' extension 2025-09-05T12:56:13,969 error: unknown file type '.pxd' (from 'forgi/threedee/utilities/broken_ml_core_py.pxd') 2025-09-05T12:56:14,509 ERROR: python setup.py bdist_wheel exited with 1 2025-09-05T12:56:14,523 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-05T12:56:14,523 exec(compile('"'"''"'"''"'"' 2025-09-05T12:56:14,523 # This is -- a caller that pip uses to run setup.py 2025-09-05T12:56:14,523 # 2025-09-05T12:56:14,523 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-05T12:56:14,523 # import from `distutils.core` to work with newer packaging standards. 2025-09-05T12:56:14,523 # - It provides a clear error message when setuptools is not installed. 2025-09-05T12:56:14,523 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-05T12:56:14,523 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-05T12:56:14,523 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-05T12:56:14,523 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-05T12:56:14,523 import os, sys, tokenize, traceback 2025-09-05T12:56:14,523 2025-09-05T12:56:14,523 try: 2025-09-05T12:56:14,523 import setuptools 2025-09-05T12:56:14,523 except ImportError: 2025-09-05T12:56:14,523 print( 2025-09-05T12:56:14,523 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-05T12:56:14,523 "the build environment with exception:", 2025-09-05T12:56:14,523 file=sys.stderr, 2025-09-05T12:56:14,523 ) 2025-09-05T12:56:14,523 traceback.print_exc() 2025-09-05T12:56:14,523 sys.exit(1) 2025-09-05T12:56:14,523 2025-09-05T12:56:14,523 __file__ = %r 2025-09-05T12:56:14,523 sys.argv[0] = __file__ 2025-09-05T12:56:14,523 2025-09-05T12:56:14,523 if os.path.exists(__file__): 2025-09-05T12:56:14,523 filename = __file__ 2025-09-05T12:56:14,523 with tokenize.open(__file__) as f: 2025-09-05T12:56:14,523 setup_py_code = f.read() 2025-09-05T12:56:14,523 else: 2025-09-05T12:56:14,523 filename = "" 2025-09-05T12:56:14,523 setup_py_code = "from setuptools import setup; setup()" 2025-09-05T12:56:14,523 2025-09-05T12:56:14,523 exec(compile(setup_py_code, filename, "exec")) 2025-09-05T12:56:14,523 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-zli9wewr/forgi_df09790f1ee04447ad7ba2a0e68f22de/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-gh64mvlj[/] 2025-09-05T12:56:14,523 [bold magenta]cwd[/]: /tmp/pip-wheel-zli9wewr/forgi_df09790f1ee04447ad7ba2a0e68f22de/ 2025-09-05T12:56:14,523 Building wheel for forgi (setup.py): finished with status 'error' 2025-09-05T12:56:14,524 ERROR: Failed building wheel for forgi 2025-09-05T12:56:14,525 Running setup.py clean for forgi 2025-09-05T12:56:14,526 Running command python setup.py clean 2025-09-05T12:56:15,231 fatal: not a git repository (or any parent up to mount point /) 2025-09-05T12:56:15,231 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-05T12:56:15,349 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-05T12:56:15,349 !! 2025-09-05T12:56:15,350 ******************************************************************************** 2025-09-05T12:56:15,350 Requirements should be satisfied by a PEP 517 installer. 2025-09-05T12:56:15,350 If you are using pip, you can try `pip install --use-pep517`. 2025-09-05T12:56:15,350 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-05T12:56:15,350 or your builds will no longer be supported. 2025-09-05T12:56:15,350 ******************************************************************************** 2025-09-05T12:56:15,350 !! 2025-09-05T12:56:15,351 dist.fetch_build_eggs(dist.setup_requires) 2025-09-05T12:56:15,707 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-05T12:56:15,707 !! 2025-09-05T12:56:15,708 ******************************************************************************** 2025-09-05T12:56:15,708 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-05T12:56:15,708 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-09-05T12:56:15,708 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-05T12:56:15,708 ******************************************************************************** 2025-09-05T12:56:15,708 !! 2025-09-05T12:56:15,708 self._finalize_license_expression() 2025-09-05T12:56:15,783 INFO:root:running clean 2025-09-05T12:56:15,927 INFO:root:removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-05T12:56:15,963 WARNING:root:'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-05T12:56:15,963 WARNING:root:'build/scripts-3.13' does not exist -- can't clean it 2025-09-05T12:56:15,963 INFO:root:removing 'build' 2025-09-05T12:56:16,081 Failed to build forgi 2025-09-05T12:56:16,082 ERROR: Failed to build one or more wheels 2025-09-05T12:56:16,083 Exception information: 2025-09-05T12:56:16,083 Traceback (most recent call last): 2025-09-05T12:56:16,083 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-05T12:56:16,083 status = _inner_run() 2025-09-05T12:56:16,083 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-05T12:56:16,083 return self.run(options, args) 2025-09-05T12:56:16,083 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-05T12:56:16,083 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-05T12:56:16,083 return func(self, options, args) 2025-09-05T12:56:16,083 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-05T12:56:16,083 raise CommandError("Failed to build one or more wheels") 2025-09-05T12:56:16,083 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-05T12:56:16,087 Removed build tracker: '/tmp/pip-build-tracker-n_bcjow0'