2025-09-06T05:32:35,862 Created temporary directory: /tmp/pip-build-tracker-ti2pa0au 2025-09-06T05:32:35,862 Initialized build tracking at /tmp/pip-build-tracker-ti2pa0au 2025-09-06T05:32:35,862 Created build tracker: /tmp/pip-build-tracker-ti2pa0au 2025-09-06T05:32:35,862 Entered build tracker: /tmp/pip-build-tracker-ti2pa0au 2025-09-06T05:32:35,863 Created temporary directory: /tmp/pip-wheel-6e81lctv 2025-09-06T05:32:35,866 Created temporary directory: /tmp/pip-ephem-wheel-cache-7_j3kiyt 2025-09-06T05:32:35,929 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-06T05:32:35,932 2 location(s) to search for versions of kssdutils: 2025-09-06T05:32:35,932 * https://pypi.org/simple/kssdutils/ 2025-09-06T05:32:35,932 * https://www.piwheels.org/simple/kssdutils/ 2025-09-06T05:32:35,932 Fetching project page and analyzing links: https://pypi.org/simple/kssdutils/ 2025-09-06T05:32:35,932 Getting page https://pypi.org/simple/kssdutils/ 2025-09-06T05:32:35,933 Found index url https://pypi.org/simple/ 2025-09-06T05:32:36,003 Fetched page https://pypi.org/simple/kssdutils/ as application/vnd.pypi.simple.v1+json 2025-09-06T05:32:36,005 Found link https://files.pythonhosted.org/packages/61/ef/1bdb91b53dbe31ea0be28ab2c2292994b6228b357a8d54b69ac642f81f01/kssdutils-1.0.0.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.0 2025-09-06T05:32:36,005 Found link https://files.pythonhosted.org/packages/6f/f6/cc67acf92ea770b5f6a8bd97d375432881861935beafe9ebd4031a73482c/kssdutils-1.0.1.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.1 2025-09-06T05:32:36,006 Found link https://files.pythonhosted.org/packages/57/17/dd41697db7220423d0ab77f9f035b9a347edc1edefc2c35d9890178cbe17/kssdutils-1.0.2.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.2 2025-09-06T05:32:36,006 Found link https://files.pythonhosted.org/packages/3e/92/7a94130bd54e0e3dd20c1a609aef2f24875b86e9d61752f63b500d3f86f5/kssdutils-1.0.3.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.3 2025-09-06T05:32:36,006 Found link https://files.pythonhosted.org/packages/42/01/15ec102f7ac6b4fc3158ba60de64598a005cefffc773fa69eecbd3c9b016/kssdutils-1.0.5.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.5 2025-09-06T05:32:36,006 Found link https://files.pythonhosted.org/packages/aa/08/08fa5f76478fd3dbe9534ad21332b5dc03826197935c2b696e189af49f0b/kssdutils-1.0.6.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.6 2025-09-06T05:32:36,006 Found link https://files.pythonhosted.org/packages/78/17/7776b7c3b149fedfb0fba98bce07fdf08cb53773dafa174f7fda9ce4df55/kssdutils-1.0.7.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.7 2025-09-06T05:32:36,007 Found link https://files.pythonhosted.org/packages/a7/50/138f2b5f98dcd2327609362e505af19857468da67dba88eaf6c8d8fdb83a/kssdutils-1.1.0.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.0 2025-09-06T05:32:36,007 Found link https://files.pythonhosted.org/packages/be/be/659d775f3dd37e727d782fa46b7b665e69a59c78312fa5fc1bad8640f980/kssdutils-1.1.2.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.2 2025-09-06T05:32:36,007 Found link https://files.pythonhosted.org/packages/d0/e9/badb25888a9e48aa82e2389e848aff81ae6affd17af96622974dc314ae52/kssdutils-1.1.3.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.3 2025-09-06T05:32:36,007 Found link https://files.pythonhosted.org/packages/b3/43/18e812a7529c356cfa20627f201f1956e4b8203e1db782861ad6e5900bf8/kssdutils-1.1.4.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.4 2025-09-06T05:32:36,007 Found link https://files.pythonhosted.org/packages/98/8c/0eb4850f10a9da51072d7be474ecffd0f808423f21838f543dc88db7ddd2/kssdutils-1.1.5.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.5 2025-09-06T05:32:36,008 Fetching project page and analyzing links: https://www.piwheels.org/simple/kssdutils/ 2025-09-06T05:32:36,008 Getting page https://www.piwheels.org/simple/kssdutils/ 2025-09-06T05:32:36,009 Found index url https://www.piwheels.org/simple/ 2025-09-06T05:32:36,112 Fetched page https://www.piwheels.org/simple/kssdutils/ as text/html 2025-09-06T05:32:36,118 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.5-cp311-cp311-linux_armv6l.whl#sha256=954571c31f45999b6eeb2cc007104d4a864f065c6aac3ff584a2e5d01fe7d22f (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,118 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.5-cp311-cp311-linux_armv7l.whl#sha256=954571c31f45999b6eeb2cc007104d4a864f065c6aac3ff584a2e5d01fe7d22f (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,118 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.4-cp311-cp311-linux_armv6l.whl#sha256=887ef39ec2c7cd34700ce800859855937714cdcebb02dcbd1c99aa7266df6c1b (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,118 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.4-cp311-cp311-linux_armv7l.whl#sha256=887ef39ec2c7cd34700ce800859855937714cdcebb02dcbd1c99aa7266df6c1b (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,118 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.3-cp311-cp311-linux_armv6l.whl#sha256=5584c66cba9b3b3dc5863d4eadba8674b765a709b4c7abc210ce12f9e49d68a3 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,118 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.3-cp311-cp311-linux_armv7l.whl#sha256=5584c66cba9b3b3dc5863d4eadba8674b765a709b4c7abc210ce12f9e49d68a3 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,118 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.2-cp311-cp311-linux_armv6l.whl#sha256=aae5676066e2d651e6883867221d727acb24b9ccd831cc4209fb7b18df10cfbb (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,118 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.2-cp311-cp311-linux_armv7l.whl#sha256=aae5676066e2d651e6883867221d727acb24b9ccd831cc4209fb7b18df10cfbb (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,119 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=0c8e77f57ec908176d8961c597a98abc9259dee9141399da1712be9b1d560bc8 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,119 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=0c8e77f57ec908176d8961c597a98abc9259dee9141399da1712be9b1d560bc8 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,119 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp311-cp311-linux_armv6l.whl#sha256=c45bd36d62b251ee659d4aeaaca8255ff10d29d84edaf2551a0fed903f1a5fe3 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,119 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp311-cp311-linux_armv7l.whl#sha256=c45bd36d62b251ee659d4aeaaca8255ff10d29d84edaf2551a0fed903f1a5fe3 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,119 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=fcc578373bf2b252b22da188e4ca939bebcc53786b1f302a901a5cf261df624e (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,119 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=fcc578373bf2b252b22da188e4ca939bebcc53786b1f302a901a5cf261df624e (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,119 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp311-cp311-linux_armv6l.whl#sha256=24cea74c37c72ec3f541e6eca026f6a906455d0e0160dc7d0f4526ab89a58125 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,119 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp311-cp311-linux_armv7l.whl#sha256=24cea74c37c72ec3f541e6eca026f6a906455d0e0160dc7d0f4526ab89a58125 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,120 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=bfe64af80d2aab63dccf6fb0418e3b806f4ee1b2fcff0eab77094040d2b6dca5 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,120 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=bfe64af80d2aab63dccf6fb0418e3b806f4ee1b2fcff0eab77094040d2b6dca5 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,120 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp311-cp311-linux_armv6l.whl#sha256=29ec8af3f080743643fee31ce978f3d65a6d90b950248e2ed6827316567aaa62 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,120 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp311-cp311-linux_armv7l.whl#sha256=29ec8af3f080743643fee31ce978f3d65a6d90b950248e2ed6827316567aaa62 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,120 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp39-cp39-linux_armv6l.whl#sha256=fb21de5c7d85619ac9cc1fafe3280f0130178032b169f1cf7ceac0cb6326d42e (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,120 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp39-cp39-linux_armv7l.whl#sha256=fb21de5c7d85619ac9cc1fafe3280f0130178032b169f1cf7ceac0cb6326d42e (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,120 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp311-cp311-linux_armv6l.whl#sha256=85c10f6c3223fb99e39dfddbef722fd2913bd5c63f089283ce23dae20c6a4a4d (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,121 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp311-cp311-linux_armv7l.whl#sha256=85c10f6c3223fb99e39dfddbef722fd2913bd5c63f089283ce23dae20c6a4a4d (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,121 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp39-cp39-linux_armv6l.whl#sha256=809195defd92c452797e9a87d99cfa8217c9ca4800c4a57d3e669846368160b1 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,121 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp39-cp39-linux_armv7l.whl#sha256=809195defd92c452797e9a87d99cfa8217c9ca4800c4a57d3e669846368160b1 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,121 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=88788d94e7e118cfdf4e2cb04c558d2032ffa4f9352b663efd1a76f098c9f31d (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,121 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=88788d94e7e118cfdf4e2cb04c558d2032ffa4f9352b663efd1a76f098c9f31d (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,121 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=29a695a62aae6fa18fcad3ae6bfc6bbe19f545f66740fde177ddbf23efa45d15 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,121 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=29a695a62aae6fa18fcad3ae6bfc6bbe19f545f66740fde177ddbf23efa45d15 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,121 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=e93f43f34a8ab412f6a0c97bc930a5c9c72997258d109e3f069a56b6270ff331 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,122 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=e93f43f34a8ab412f6a0c97bc930a5c9c72997258d109e3f069a56b6270ff331 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,122 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=0d9c0566cba326dbedbea1c1ea643cc81efe1b0b47b292f956e933d1a9fedb35 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,122 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=0d9c0566cba326dbedbea1c1ea643cc81efe1b0b47b292f956e933d1a9fedb35 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T05:32:36,122 Skipping link: not a file: https://www.piwheels.org/simple/kssdutils/ 2025-09-06T05:32:36,122 Skipping link: not a file: https://pypi.org/simple/kssdutils/ 2025-09-06T05:32:36,149 Given no hashes to check 1 links for project 'kssdutils': discarding no candidates 2025-09-06T05:32:36,150 Collecting kssdutils==1.0.2 2025-09-06T05:32:36,151 Created temporary directory: /tmp/pip-unpack-e5zrpun7 2025-09-06T05:32:36,290 Downloading kssdutils-1.0.2.tar.gz (44 kB) 2025-09-06T05:32:36,337 Added kssdutils==1.0.2 from https://files.pythonhosted.org/packages/57/17/dd41697db7220423d0ab77f9f035b9a347edc1edefc2c35d9890178cbe17/kssdutils-1.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-ti2pa0au' 2025-09-06T05:32:36,339 Running setup.py (path:/tmp/pip-wheel-6e81lctv/kssdutils_f1499dc45dbc4068b42e97afb656df87/setup.py) egg_info for package kssdutils 2025-09-06T05:32:36,339 Created temporary directory: /tmp/pip-pip-egg-info-ns8d14p7 2025-09-06T05:32:36,339 Preparing metadata (setup.py): started 2025-09-06T05:32:36,340 Running command python setup.py egg_info 2025-09-06T05:32:37,563 running egg_info 2025-09-06T05:32:37,639 creating /tmp/pip-pip-egg-info-ns8d14p7/kssdutils.egg-info 2025-09-06T05:32:37,639 writing /tmp/pip-pip-egg-info-ns8d14p7/kssdutils.egg-info/PKG-INFO 2025-09-06T05:32:37,640 writing dependency_links to /tmp/pip-pip-egg-info-ns8d14p7/kssdutils.egg-info/dependency_links.txt 2025-09-06T05:32:37,641 writing top-level names to /tmp/pip-pip-egg-info-ns8d14p7/kssdutils.egg-info/top_level.txt 2025-09-06T05:32:37,641 writing manifest file '/tmp/pip-pip-egg-info-ns8d14p7/kssdutils.egg-info/SOURCES.txt' 2025-09-06T05:32:37,933 reading manifest file '/tmp/pip-pip-egg-info-ns8d14p7/kssdutils.egg-info/SOURCES.txt' 2025-09-06T05:32:37,934 reading manifest template 'MANIFEST.in' 2025-09-06T05:32:37,935 warning: no files found matching '*.h' under directory 'njheaders' 2025-09-06T05:32:37,936 warning: no files found matching '*.h' under directory 'dnjheaders' 2025-09-06T05:32:37,938 writing manifest file '/tmp/pip-pip-egg-info-ns8d14p7/kssdutils.egg-info/SOURCES.txt' 2025-09-06T05:32:38,050 Preparing metadata (setup.py): finished with status 'done' 2025-09-06T05:32:38,054 Source in /tmp/pip-wheel-6e81lctv/kssdutils_f1499dc45dbc4068b42e97afb656df87 has version 1.0.2, which satisfies requirement kssdutils==1.0.2 from https://files.pythonhosted.org/packages/57/17/dd41697db7220423d0ab77f9f035b9a347edc1edefc2c35d9890178cbe17/kssdutils-1.0.2.tar.gz 2025-09-06T05:32:38,055 Removed kssdutils==1.0.2 from https://files.pythonhosted.org/packages/57/17/dd41697db7220423d0ab77f9f035b9a347edc1edefc2c35d9890178cbe17/kssdutils-1.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-ti2pa0au' 2025-09-06T05:32:38,057 Created temporary directory: /tmp/pip-unpack-10oir4gp 2025-09-06T05:32:38,058 Created temporary directory: /tmp/pip-unpack-cdnx7s0u 2025-09-06T05:32:38,058 Building wheels for collected packages: kssdutils 2025-09-06T05:32:38,059 Created temporary directory: /tmp/pip-wheel-t7p0l5xa 2025-09-06T05:32:38,059 DEPRECATION: Building 'kssdutils' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'kssdutils'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-06T05:32:38,061 Building wheel for kssdutils (setup.py): started 2025-09-06T05:32:38,061 Destination directory: /tmp/pip-wheel-t7p0l5xa 2025-09-06T05:32:38,061 Running command python setup.py bdist_wheel 2025-09-06T05:32:39,113 running bdist_wheel 2025-09-06T05:32:39,476 running build 2025-09-06T05:32:39,476 running build_py 2025-09-06T05:32:39,550 creating build/lib.linux-armv7l-cpython-313 2025-09-06T05:32:39,550 copying kssdutils.py -> build/lib.linux-armv7l-cpython-313 2025-09-06T05:32:39,551 running egg_info 2025-09-06T05:32:39,621 writing kssdutils.egg-info/PKG-INFO 2025-09-06T05:32:39,622 writing dependency_links to kssdutils.egg-info/dependency_links.txt 2025-09-06T05:32:39,623 writing top-level names to kssdutils.egg-info/top_level.txt 2025-09-06T05:32:39,698 reading manifest file 'kssdutils.egg-info/SOURCES.txt' 2025-09-06T05:32:39,701 reading manifest template 'MANIFEST.in' 2025-09-06T05:32:39,702 warning: no files found matching '*.h' under directory 'njheaders' 2025-09-06T05:32:39,703 warning: no files found matching '*.h' under directory 'dnjheaders' 2025-09-06T05:32:39,706 writing manifest file 'kssdutils.egg-info/SOURCES.txt' 2025-09-06T05:32:39,706 running build_ext 2025-09-06T05:32:40,040 building 'kssd' extension 2025-09-06T05:32:40,042 creating build/temp.linux-armv7l-cpython-313 2025-09-06T05:32:40,044 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c co2mco.c -o build/temp.linux-armv7l-cpython-313/co2mco.o -fopenmp 2025-09-06T05:32:40,207 co2mco.c: In function ‘cdb_kmerf2kmerdb’: 2025-09-06T05:32:40,208 co2mco.c:109:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2025-09-06T05:32:40,208 109 | for (unsigned int i = 0; i < comp_num; i++) { 2025-09-06T05:32:40,208 | ^ 2025-09-06T05:32:40,211 co2mco.c: In function ‘co2unitllmco’: 2025-09-06T05:32:40,211 co2mco.c:191:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2025-09-06T05:32:40,211 191 | for (unsigned int i = 0; i < bin_sz; i++) { 2025-09-06T05:32:40,211 | ^ 2025-09-06T05:32:40,889 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_composite.c -o build/temp.linux-armv7l-cpython-313/command_composite.o -fopenmp 2025-09-06T05:32:41,267 command_composite.c: In function ‘get_species_abundance’: 2025-09-06T05:32:41,268 command_composite.c:32:72: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2025-09-06T05:32:41,268 32 | if (ref_dstat_fpath == NULL) fprintf(stderr, "cannot find %s under %s ", co_dstat, ref_dstat_fpath); 2025-09-06T05:32:41,268 | ^~ 2025-09-06T05:32:41,268 command_composite.c:34:72: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2025-09-06T05:32:41,268 34 | if (qry_dstat_fpath == NULL) fprintf(stderr, "cannot find %s under %s ", co_dstat, qry_dstat_fpath); 2025-09-06T05:32:41,268 | ^~ 2025-09-06T05:32:41,268 command_composite.c:64:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:41,268 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2025-09-06T05:32:41,268 | ^ 2025-09-06T05:32:41,269 command_composite.c:64:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:41,269 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2025-09-06T05:32:41,269 | ^~~~~~~~~~ 2025-09-06T05:32:41,269 command_composite.c:64:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2025-09-06T05:32:41,269 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2025-09-06T05:32:41,269 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,269 command_composite.c:70:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:41,269 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2025-09-06T05:32:41,269 | ^ 2025-09-06T05:32:41,269 command_composite.c:70:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:41,270 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2025-09-06T05:32:41,270 | ^~~~~~~~~~ 2025-09-06T05:32:41,270 command_composite.c:70:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2025-09-06T05:32:41,270 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2025-09-06T05:32:41,270 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,270 command_composite.c:76:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:41,270 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2025-09-06T05:32:41,270 | ^ 2025-09-06T05:32:41,270 command_composite.c:76:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:41,270 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2025-09-06T05:32:41,271 | ^~~~~~~~~~ 2025-09-06T05:32:41,271 command_composite.c:76:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2025-09-06T05:32:41,271 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2025-09-06T05:32:41,271 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,271 command_composite.c:82:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:41,271 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2025-09-06T05:32:41,271 | ^ 2025-09-06T05:32:41,271 command_composite.c:82:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:41,271 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2025-09-06T05:32:41,271 | ^~~~~~~~~~ 2025-09-06T05:32:41,272 command_composite.c:82:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2025-09-06T05:32:41,272 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2025-09-06T05:32:41,272 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,272 command_composite.c:88:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:41,272 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2025-09-06T05:32:41,272 | ^ 2025-09-06T05:32:41,272 command_composite.c:88:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:41,272 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2025-09-06T05:32:41,272 | ^~~~~~~~~~~~ 2025-09-06T05:32:41,273 command_composite.c:88:13: note: ‘sprintf’ output 6 or more bytes (assuming 271) into a destination of size 256 2025-09-06T05:32:41,273 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2025-09-06T05:32:41,273 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,515 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_dist.c -o build/temp.linux-armv7l-cpython-313/command_dist.o -fopenmp 2025-09-06T05:32:41,733 command_dist.c: In function ‘mco_cbd_co_dist’: 2025-09-06T05:32:41,735 command_dist.c:677:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T05:32:41,735 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T05:32:41,735 | ~~^ 2025-09-06T05:32:41,735 | | 2025-09-06T05:32:41,735 | long unsigned int 2025-09-06T05:32:41,735 | %u 2025-09-06T05:32:41,735 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T05:32:41,735 | ~~~~~~~ 2025-09-06T05:32:41,735 | | 2025-09-06T05:32:41,736 | size_t {aka unsigned int} 2025-09-06T05:32:41,737 command_dist.c:677:92: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T05:32:41,737 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T05:32:41,737 | ~~^ 2025-09-06T05:32:41,737 | | 2025-09-06T05:32:41,737 | long unsigned int 2025-09-06T05:32:41,737 | %u 2025-09-06T05:32:41,737 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T05:32:41,737 679 | maplength, (size_t) b * unitsz_distf_mapped); 2025-09-06T05:32:41,737 | ~~~~~~~~~ 2025-09-06T05:32:41,737 | | 2025-09-06T05:32:41,737 | size_t {aka unsigned int} 2025-09-06T05:32:41,738 command_dist.c:677:97: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2025-09-06T05:32:41,739 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T05:32:41,739 | ~~^ 2025-09-06T05:32:41,739 | | 2025-09-06T05:32:41,739 | long unsigned int 2025-09-06T05:32:41,739 | %u 2025-09-06T05:32:41,739 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T05:32:41,739 679 | maplength, (size_t) b * unitsz_distf_mapped); 2025-09-06T05:32:41,739 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,739 | | 2025-09-06T05:32:41,739 | unsigned int 2025-09-06T05:32:41,742 command_dist.c:715:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-06T05:32:41,742 715 | for (int n = 0; n < fco_pos[k + 1] - fco_pos[k]; n++) { 2025-09-06T05:32:41,742 | ^ 2025-09-06T05:32:41,749 command_dist.c: In function ‘mco_cbdco_nobin_dist’: 2025-09-06T05:32:41,751 command_dist.c:863:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T05:32:41,751 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2025-09-06T05:32:41,751 | ~~^ ~~~~~~~ 2025-09-06T05:32:41,751 | | | 2025-09-06T05:32:41,751 | long unsigned int size_t {aka unsigned int} 2025-09-06T05:32:41,752 | %u 2025-09-06T05:32:41,753 command_dist.c:863:93: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T05:32:41,754 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2025-09-06T05:32:41,754 | ~~^ 2025-09-06T05:32:41,754 | | 2025-09-06T05:32:41,754 | long unsigned int 2025-09-06T05:32:41,754 | %u 2025-09-06T05:32:41,754 864 | mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, maplength, 2025-09-06T05:32:41,754 | ~~~~~~~~~ 2025-09-06T05:32:41,754 | | 2025-09-06T05:32:41,754 | size_t {aka unsigned int} 2025-09-06T05:32:41,756 command_dist.c:863:98: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2025-09-06T05:32:41,756 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2025-09-06T05:32:41,756 | ~~^ 2025-09-06T05:32:41,756 | | 2025-09-06T05:32:41,756 | long unsigned int 2025-09-06T05:32:41,756 | %u 2025-09-06T05:32:41,757 864 | mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, maplength, 2025-09-06T05:32:41,757 865 | (size_t) b * unitsz_distf_mapped); 2025-09-06T05:32:41,757 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,757 | | 2025-09-06T05:32:41,757 | unsigned int 2025-09-06T05:32:41,759 command_dist.c:810:13: warning: unused variable ‘fco_pos’ [-Wunused-variable] 2025-09-06T05:32:41,759 810 | size_t *fco_pos = malloc(sizeof(size_t) * (co_dstat_readin.infile_num + 1)); 2025-09-06T05:32:41,759 | ^~~~~~~ 2025-09-06T05:32:41,760 command_dist.c:809:17: warning: unused variable ‘cbd_fcode_stat’ [-Wunused-variable] 2025-09-06T05:32:41,760 809 | struct stat cbd_fcode_stat; 2025-09-06T05:32:41,760 | ^~~~~~~~~~~~~~ 2025-09-06T05:32:41,761 command_dist.c:808:31: warning: unused variable ‘cbd_fcode_comp_index_fp’ [-Wunused-variable] 2025-09-06T05:32:41,761 808 | FILE *cbd_fcode_comp_fp, *cbd_fcode_comp_index_fp; 2025-09-06T05:32:41,761 | ^~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,762 command_dist.c:808:11: warning: unused variable ‘cbd_fcode_comp_fp’ [-Wunused-variable] 2025-09-06T05:32:41,762 808 | FILE *cbd_fcode_comp_fp, *cbd_fcode_comp_index_fp; 2025-09-06T05:32:41,762 | ^~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,769 command_dist.c: In function ‘mco_cbd_koc_compatible_dist’: 2025-09-06T05:32:41,771 command_dist.c:1018:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T05:32:41,771 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T05:32:41,771 | ~~^ 2025-09-06T05:32:41,771 | | 2025-09-06T05:32:41,771 | long unsigned int 2025-09-06T05:32:41,771 | %u 2025-09-06T05:32:41,772 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T05:32:41,772 | ~~~~~~~ 2025-09-06T05:32:41,772 | | 2025-09-06T05:32:41,772 | size_t {aka unsigned int} 2025-09-06T05:32:41,774 command_dist.c:1018:92: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T05:32:41,774 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T05:32:41,774 | ~~^ 2025-09-06T05:32:41,774 | | 2025-09-06T05:32:41,774 | long unsigned int 2025-09-06T05:32:41,774 | %u 2025-09-06T05:32:41,775 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T05:32:41,775 1020 | maplength, (size_t) b * unitsz_distf_mapped); 2025-09-06T05:32:41,775 | ~~~~~~~~~ 2025-09-06T05:32:41,775 | | 2025-09-06T05:32:41,775 | size_t {aka unsigned int} 2025-09-06T05:32:41,777 command_dist.c:1018:97: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2025-09-06T05:32:41,777 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T05:32:41,777 | ~~^ 2025-09-06T05:32:41,777 | | 2025-09-06T05:32:41,777 | long unsigned int 2025-09-06T05:32:41,777 | %u 2025-09-06T05:32:41,777 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T05:32:41,777 1020 | maplength, (size_t) b * unitsz_distf_mapped); 2025-09-06T05:32:41,778 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:41,778 | | 2025-09-06T05:32:41,778 | unsigned int 2025-09-06T05:32:41,782 command_dist.c: In function ‘mco_co_dist_core’: 2025-09-06T05:32:41,784 command_dist.c:1116:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘gidobj_t’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-06T05:32:41,784 1116 | for (int k = 1; k < unit_arrmco[ind][0] + 1; k++) { 2025-09-06T05:32:41,784 | ^ 2025-09-06T05:32:41,785 command_dist.c: In function ‘fname_dist_print’: 2025-09-06T05:32:41,786 command_dist.c:1163:25: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘__off64_t’ {aka ‘long long int’} [-Wsign-compare] 2025-09-06T05:32:41,786 1163 | for (llong i = 0; i < s.st_size / sizeof(ctx_obj_ct_t); i++) { 2025-09-06T05:32:41,787 | ^ 2025-09-06T05:32:41,791 command_dist.c: In function ‘koc_dist_print_nobin’: 2025-09-06T05:32:41,793 command_dist.c:1239:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T05:32:41,793 1239 | for (int rid = 0; rid < ref_num; rid++) 2025-09-06T05:32:41,793 | ^ 2025-09-06T05:32:41,795 command_dist.c:1245:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T05:32:41,795 1245 | for (int rid = 0; rid < ref_num; rid++) { 2025-09-06T05:32:41,796 | ^ 2025-09-06T05:32:41,801 command_dist.c: In function ‘dist_print_nobin’: 2025-09-06T05:32:41,803 command_dist.c:1335:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T05:32:41,803 1335 | if ((N_max > NREF) || (N_max > ref_num)) { 2025-09-06T05:32:41,803 | ^ 2025-09-06T05:32:41,806 command_dist.c:1356:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T05:32:41,806 1356 | for (int rid = 0; rid < ref_num; rid++) { 2025-09-06T05:32:41,806 | ^ 2025-09-06T05:32:41,808 command_dist.c:1382:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T05:32:41,808 1382 | for (int rid = 0; rid < ref_num; rid++) 2025-09-06T05:32:41,808 | ^ 2025-09-06T05:32:42,197 command_dist.c: In function ‘run_stageI._omp_fn.1’: 2025-09-06T05:32:42,197 command_dist.c:403:21: warning: ‘com_abund_fp’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-06T05:32:42,197 403 | fwrite(tmp_mem, sizeof(unsigned short) * tmpkmerct, 1, com_abund_fp); 2025-09-06T05:32:42,198 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:42,198 command_dist.c:375:40: note: ‘com_abund_fp’ was declared here 2025-09-06T05:32:42,198 375 | FILE *com_cofp, *indexfp, *com_abund_fp; 2025-09-06T05:32:42,198 | ^~~~~~~~~~~~ 2025-09-06T05:32:43,002 command_dist.c: In function ‘get_dim_shuffle’: 2025-09-06T05:32:43,003 command_dist.c:267:36: warning: ‘%s’ directive writing up to 264 bytes into a region of size 256 [-Wformat-overflow=] 2025-09-06T05:32:43,003 267 | sprintf(shuf_infile_name, "%s.shuf", shuf_infile_name_prefix); 2025-09-06T05:32:43,003 | ^~ ~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:43,003 command_dist.c:267:9: note: ‘sprintf’ output between 6 and 270 bytes into a destination of size 256 2025-09-06T05:32:43,003 267 | sprintf(shuf_infile_name, "%s.shuf", shuf_infile_name_prefix); 2025-09-06T05:32:43,003 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:43,919 command_dist.c: In function ‘mco_cbd_co_dist’: 2025-09-06T05:32:43,920 command_dist.c:596:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:43,920 596 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T05:32:43,921 | ^~ ~~~~~~~~~ 2025-09-06T05:32:43,921 command_dist.c:596:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2025-09-06T05:32:43,921 596 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T05:32:43,921 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:43,922 command_dist.c:625:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:43,922 625 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T05:32:43,922 | ^~~~~~~~~~~~~~~ 2025-09-06T05:32:43,923 command_dist.c:625:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2025-09-06T05:32:43,923 625 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T05:32:43,923 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:43,925 command_dist.c:681:41: warning: ‘/mco.index.’ directive writing 11 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:43,925 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T05:32:43,925 | ^~~~~~~~~~~ 2025-09-06T05:32:43,926 command_dist.c:681:38: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:43,926 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T05:32:43,926 | ^~~~~~~~~~~~~~~~~ 2025-09-06T05:32:43,927 command_dist.c:681:13: note: ‘sprintf’ output between 13 and 278 bytes into a destination of size 256 2025-09-06T05:32:43,927 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T05:32:43,927 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:43,928 command_dist.c:682:35: warning: ‘/mco.’ directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:43,928 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T05:32:43,928 | ^~~~~ 2025-09-06T05:32:43,929 command_dist.c:682:32: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:43,929 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T05:32:43,929 | ^~~~~~~~~~~ 2025-09-06T05:32:43,929 command_dist.c:682:13: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2025-09-06T05:32:43,930 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T05:32:43,930 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,177 command_dist.c: In function ‘mco_cbdco_nobin_dist’: 2025-09-06T05:32:44,178 command_dist.c:763:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:44,178 763 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T05:32:44,178 | ^~ ~~~~~~~~~ 2025-09-06T05:32:44,179 command_dist.c:763:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2025-09-06T05:32:44,179 763 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T05:32:44,179 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,180 command_dist.c:790:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:44,180 790 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T05:32:44,180 | ^~~~~~~~~~~~~~~ 2025-09-06T05:32:44,181 command_dist.c:790:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2025-09-06T05:32:44,181 790 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T05:32:44,181 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,182 command_dist.c:823:23: warning: ‘/distance.out’ directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:44,183 823 | sprintf(distf, "%s/distance.out", distout_dir); 2025-09-06T05:32:44,183 | ^~~~~~~~~~~~~ 2025-09-06T05:32:44,183 command_dist.c:823:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2025-09-06T05:32:44,184 823 | sprintf(distf, "%s/distance.out", distout_dir); 2025-09-06T05:32:44,184 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,185 command_dist.c:849:39: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:44,185 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2025-09-06T05:32:44,185 | ^ 2025-09-06T05:32:44,186 command_dist.c:849:33: note: directive argument in the range [0, 536870912] 2025-09-06T05:32:44,186 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2025-09-06T05:32:44,186 | ^~~~~~~~~~ 2025-09-06T05:32:44,187 command_dist.c:849:8: note: ‘sprintf’ output 4 or more bytes (assuming 267) into a destination of size 256 2025-09-06T05:32:44,187 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2025-09-06T05:32:44,187 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,188 command_dist.c:851:34: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:44,188 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2025-09-06T05:32:44,189 | ^ 2025-09-06T05:32:44,189 command_dist.c:851:28: note: directive argument in the range [0, 536870912] 2025-09-06T05:32:44,190 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2025-09-06T05:32:44,190 | ^~~~~~~~~~ 2025-09-06T05:32:44,191 command_dist.c:851:9: note: ‘sprintf’ output 4 or more bytes (assuming 267) into a destination of size 256 2025-09-06T05:32:44,191 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2025-09-06T05:32:44,191 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,456 command_dist.c: In function ‘mco_cbd_koc_compatible_dist’: 2025-09-06T05:32:44,458 command_dist.c:927:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:44,458 927 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T05:32:44,458 | ^~ ~~~~~~~~~ 2025-09-06T05:32:44,459 command_dist.c:927:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2025-09-06T05:32:44,459 927 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T05:32:44,460 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,461 command_dist.c:956:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:44,461 956 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T05:32:44,461 | ^~~~~~~~~~~~~~~ 2025-09-06T05:32:44,462 command_dist.c:956:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2025-09-06T05:32:44,462 956 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T05:32:44,462 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,463 command_dist.c:990:23: warning: ‘/distance.out’ directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:44,464 990 | sprintf(distf, "%s/distance.out", distout_dir); 2025-09-06T05:32:44,464 | ^~~~~~~~~~~~~ 2025-09-06T05:32:44,465 command_dist.c:990:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2025-09-06T05:32:44,465 990 | sprintf(distf, "%s/distance.out", distout_dir); 2025-09-06T05:32:44,465 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,467 command_dist.c:1022:41: warning: ‘/mco.index.’ directive writing 11 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:44,467 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T05:32:44,467 | ^~~~~~~~~~~ 2025-09-06T05:32:44,469 command_dist.c:1022:38: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:44,469 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T05:32:44,469 | ^~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,470 command_dist.c:1022:13: note: ‘sprintf’ output between 13 and 278 bytes into a destination of size 256 2025-09-06T05:32:44,470 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T05:32:44,470 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,471 command_dist.c:1023:35: warning: ‘/mco.’ directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T05:32:44,471 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T05:32:44,472 | ^~~~~ 2025-09-06T05:32:44,473 command_dist.c:1023:32: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:44,473 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T05:32:44,473 | ^~~~~~~~~~~ 2025-09-06T05:32:44,474 command_dist.c:1023:13: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2025-09-06T05:32:44,474 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T05:32:44,474 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,750 command_dist.c: In function ‘combine_queries’: 2025-09-06T05:32:44,752 command_dist.c:1492:41: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:44,752 1492 | sprintf(one_kmerct_list_name, "%s/%s", co_dir, kmerct_list_fname); 2025-09-06T05:32:44,752 | ^ 2025-09-06T05:32:44,753 command_dist.c:1492:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T05:32:44,754 1492 | sprintf(one_kmerct_list_name, "%s/%s", co_dir, kmerct_list_fname); 2025-09-06T05:32:44,754 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,755 command_dist.c:1499:40: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:44,756 1499 | sprintf(one_infilename_name, "%s/%s", co_dir, fname_fname); 2025-09-06T05:32:44,756 | ^ 2025-09-06T05:32:44,757 command_dist.c:1499:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T05:32:44,758 1499 | sprintf(one_infilename_name, "%s/%s", co_dir, fname_fname); 2025-09-06T05:32:44,758 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:44,761 command_dist.c:1603:32: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:44,761 1603 | sprintf(one_stat_name, "%s/%s", co_dir, co_dstat); 2025-09-06T05:32:44,761 | ^~ ~~~~~~~~ 2025-09-06T05:32:44,763 command_dist.c:1603:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2025-09-06T05:32:44,763 1603 | sprintf(one_stat_name, "%s/%s", co_dir, co_dstat); 2025-09-06T05:32:44,763 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,251 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_dist_wrapper.c -o build/temp.linux-armv7l-cpython-313/command_dist_wrapper.o -fopenmp 2025-09-06T05:32:45,423 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_set.c -o build/temp.linux-armv7l-cpython-313/command_set.o -fopenmp 2025-09-06T05:32:45,593 command_set.c: In function ‘sketch_operate’: 2025-09-06T05:32:45,593 command_set.c:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-06T05:32:45,593 178 | for(int n = 0; n < fco_pos[i+1] - fco_pos[i]; n++){ 2025-09-06T05:32:45,593 | ^ 2025-09-06T05:32:45,605 command_set.c: In function ‘combin_subset_pans’: 2025-09-06T05:32:45,606 command_set.c:457:10: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2025-09-06T05:32:45,606 457 | free(co_dstat_fpath); 2025-09-06T05:32:45,606 | ^~~~~~~~~~~~~~ 2025-09-06T05:32:45,607 In file included from kssdheaders/global_basic.h:159, 2025-09-06T05:32:45,607 from command_set.c:15: 2025-09-06T05:32:45,607 /usr/include/stdlib.h:687:25: note: expected ‘void *’ but argument is of type ‘const char *’ 2025-09-06T05:32:45,607 687 | extern void free (void *__ptr) __THROW; 2025-09-06T05:32:45,607 | ~~~~~~^~~~~ 2025-09-06T05:32:45,613 command_set.c: In function ‘grouping_genomes’: 2025-09-06T05:32:45,614 command_set.c:562:10: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2025-09-06T05:32:45,614 562 | free(co_dstat_fpath); 2025-09-06T05:32:45,614 | ^~~~~~~~~~~~~~ 2025-09-06T05:32:45,614 /usr/include/stdlib.h:687:25: note: expected ‘void *’ but argument is of type ‘const char *’ 2025-09-06T05:32:45,614 687 | extern void free (void *__ptr) __THROW; 2025-09-06T05:32:45,614 | ~~~~~~^~~~~ 2025-09-06T05:32:45,789 command_set.c: In function ‘sketch_union’: 2025-09-06T05:32:45,789 command_set.c:71:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:45,789 71 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:45,789 | ^ 2025-09-06T05:32:45,790 command_set.c:71:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T05:32:45,790 71 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:45,790 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,790 command_set.c:82:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:45,790 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T05:32:45,790 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:45,790 command_set.c:82:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:45,790 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T05:32:45,790 | ^~~~~~~~~~ 2025-09-06T05:32:45,791 command_set.c:82:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T05:32:45,791 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T05:32:45,791 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,791 command_set.c:92:29: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:45,791 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2025-09-06T05:32:45,791 | ^~ ~~~~~~~~~~ 2025-09-06T05:32:45,791 command_set.c:92:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:45,791 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2025-09-06T05:32:45,791 | ^~~~~~~~~~ 2025-09-06T05:32:45,792 command_set.c:92:9: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2025-09-06T05:32:45,792 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2025-09-06T05:32:45,792 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,921 command_set.c: In function ‘sketch_operate’: 2025-09-06T05:32:45,921 command_set.c:153:29: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:45,921 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2025-09-06T05:32:45,921 | ^~ ~~~~~~~~~~ 2025-09-06T05:32:45,921 command_set.c:153:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:45,921 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2025-09-06T05:32:45,921 | ^~~~~~~~~~ 2025-09-06T05:32:45,922 command_set.c:153:9: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2025-09-06T05:32:45,922 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2025-09-06T05:32:45,922 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,922 command_set.c:155:33: warning: ‘%s’ directive writing 8 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:45,922 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2025-09-06T05:32:45,922 | ^~ ~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,922 command_set.c:155:29: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:45,922 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2025-09-06T05:32:45,922 | ^~~~~~~~~~ 2025-09-06T05:32:45,922 command_set.c:155:13: note: ‘sprintf’ output between 12 and 277 bytes into a destination of size 256 2025-09-06T05:32:45,922 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2025-09-06T05:32:45,923 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,923 command_set.c:165:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:45,923 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T05:32:45,923 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:45,923 command_set.c:165:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:45,923 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T05:32:45,923 | ^~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,923 command_set.c:165:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T05:32:45,923 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T05:32:45,923 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,923 command_set.c:169:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:45,924 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T05:32:45,924 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:45,924 command_set.c:169:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:45,924 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T05:32:45,924 | ^~~~~~~~~~ 2025-09-06T05:32:45,924 command_set.c:169:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T05:32:45,924 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T05:32:45,924 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,924 command_set.c:174:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:45,924 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T05:32:45,924 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:45,925 command_set.c:174:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:45,925 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T05:32:45,925 | ^~~~~~~~~~ 2025-09-06T05:32:45,925 command_set.c:174:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T05:32:45,925 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T05:32:45,925 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,925 command_set.c:187:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:45,925 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T05:32:45,925 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:45,925 command_set.c:187:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:45,925 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T05:32:45,926 | ^~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,926 command_set.c:187:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T05:32:45,926 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T05:32:45,926 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:45,926 command_set.c:192:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:45,926 192 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:45,926 | ^ 2025-09-06T05:32:45,926 command_set.c:192:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T05:32:45,926 192 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:45,926 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,093 command_set.c: In function ‘uniq_sketch_union’: 2025-09-06T05:32:46,093 command_set.c:219:39: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:46,093 219 | sprintf(unionco,"%s.%d",uniq_pan_prefix,i); 2025-09-06T05:32:46,093 | ^ 2025-09-06T05:32:46,093 command_set.c:219:17: note: ‘sprintf’ output between 11 and 21 bytes into a destination of size 20 2025-09-06T05:32:46,094 219 | sprintf(unionco,"%s.%d",uniq_pan_prefix,i); 2025-09-06T05:32:46,094 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,094 command_set.c:234:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:46,094 234 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:46,094 | ^ 2025-09-06T05:32:46,094 command_set.c:234:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T05:32:46,094 234 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:46,094 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,095 command_set.c:247:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,095 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T05:32:46,095 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:46,095 command_set.c:247:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,095 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T05:32:46,095 | ^~~~~~~~~~ 2025-09-06T05:32:46,095 command_set.c:247:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T05:32:46,095 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T05:32:46,096 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,096 command_set.c:259:29: warning: ‘%s’ directive writing 8 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,096 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2025-09-06T05:32:46,096 | ^~ ~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,096 command_set.c:259:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,096 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2025-09-06T05:32:46,096 | ^~~~~~~~~~ 2025-09-06T05:32:46,097 command_set.c:259:9: note: ‘sprintf’ output between 12 and 277 bytes into a destination of size 256 2025-09-06T05:32:46,097 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2025-09-06T05:32:46,097 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,237 command_set.c: In function ‘combin_pans’: 2025-09-06T05:32:46,237 command_set.c:297:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,237 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,238 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:46,238 command_set.c:297:25: note: directive argument in the range [0, 1073741823] 2025-09-06T05:32:46,238 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,238 | ^~~~~~~~~~ 2025-09-06T05:32:46,238 command_set.c:297:9: note: ‘sprintf’ output between 10 and 274 bytes into a destination of size 256 2025-09-06T05:32:46,238 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,238 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,239 command_set.c:300:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,239 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,239 | ^~ ~~~~~~~~~~ 2025-09-06T05:32:46,239 command_set.c:300:25: note: directive argument in the range [0, 1073741823] 2025-09-06T05:32:46,239 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,239 | ^~~~~~~~~~ 2025-09-06T05:32:46,239 command_set.c:300:9: note: ‘sprintf’ output between 16 and 280 bytes into a destination of size 256 2025-09-06T05:32:46,240 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,240 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,240 command_set.c:342:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:46,241 342 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:46,241 | ^ 2025-09-06T05:32:46,241 command_set.c:342:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T05:32:46,241 342 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:46,241 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,457 command_set.c: In function ‘combin_subset_pans’: 2025-09-06T05:32:46,458 command_set.c:469:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,458 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T05:32:46,458 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:46,459 command_set.c:469:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,459 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T05:32:46,459 | ^~~~~~~~~~ 2025-09-06T05:32:46,459 command_set.c:469:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T05:32:46,459 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T05:32:46,460 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,460 command_set.c:475:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,460 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T05:32:46,460 | ^~ ~~~~~~~~~~ 2025-09-06T05:32:46,461 command_set.c:475:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,461 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T05:32:46,461 | ^~~~~~~~~~ 2025-09-06T05:32:46,461 command_set.c:475:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T05:32:46,462 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T05:32:46,462 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,462 command_set.c:481:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,462 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,463 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:46,463 command_set.c:481:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,463 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,463 | ^~~~~~~~~~ 2025-09-06T05:32:46,463 command_set.c:481:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T05:32:46,464 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,464 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,465 command_set.c:512:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,465 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,465 | ^~ ~~~~~~~~~~ 2025-09-06T05:32:46,465 command_set.c:512:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,465 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,465 | ^~~~~~~~~~ 2025-09-06T05:32:46,466 command_set.c:512:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T05:32:46,466 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,466 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,467 command_set.c:523:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:46,467 523 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:46,467 | ^ 2025-09-06T05:32:46,467 command_set.c:523:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T05:32:46,467 523 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:46,468 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,703 command_set.c: In function ‘grouping_genomes’: 2025-09-06T05:32:46,704 command_set.c:574:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,704 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T05:32:46,704 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:46,705 command_set.c:574:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,705 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T05:32:46,705 | ^~~~~~~~~~ 2025-09-06T05:32:46,705 command_set.c:574:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T05:32:46,705 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T05:32:46,705 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,706 command_set.c:580:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,706 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T05:32:46,707 | ^~ ~~~~~~~~~~ 2025-09-06T05:32:46,707 command_set.c:580:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,707 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T05:32:46,707 | ^~~~~~~~~~ 2025-09-06T05:32:46,708 command_set.c:580:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T05:32:46,708 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T05:32:46,708 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,709 command_set.c:612:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,709 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,709 | ^~ ~~~~~~~~~~~ 2025-09-06T05:32:46,710 command_set.c:612:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,710 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,710 | ^~~~~~~~~~ 2025-09-06T05:32:46,711 command_set.c:612:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T05:32:46,711 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T05:32:46,711 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,712 command_set.c:634:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T05:32:46,712 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,712 | ^~ ~~~~~~~~~~ 2025-09-06T05:32:46,713 command_set.c:634:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T05:32:46,713 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,713 | ^~~~~~~~~~ 2025-09-06T05:32:46,714 command_set.c:634:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T05:32:46,714 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T05:32:46,714 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,715 command_set.c:645:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T05:32:46,715 645 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:46,715 | ^ 2025-09-06T05:32:46,715 command_set.c:645:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T05:32:46,716 645 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T05:32:46,716 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T05:32:46,994 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_shuffle.c -o build/temp.linux-armv7l-cpython-313/command_shuffle.o -fopenmp 2025-09-06T05:32:47,302 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c global_basic.c -o build/temp.linux-armv7l-cpython-313/global_basic.o -fopenmp 2025-09-06T05:32:47,475 global_basic.c: In function ‘organize_infile_list’: 2025-09-06T05:32:47,475 global_basic.c:195:20: error: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 2025-09-06T05:32:47,475 195 | while (isspace(*buf)) buf++; 2025-09-06T05:32:47,475 | ^~~~~~~ 2025-09-06T05:32:47,476 global_basic.c:35:1: note: include ‘’ or provide a declaration of ‘isspace’ 2025-09-06T05:32:47,476 34 | #include 2025-09-06T05:32:47,476 +++ |+#include 2025-09-06T05:32:47,476 35 | 2025-09-06T05:32:47,477 global_basic.c:201:69: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T05:32:47,477 201 | "the input list: %s\n %dth line: %s has %lu characters exceed the maximal allowed length %d", 2025-09-06T05:32:47,477 | ~~^ 2025-09-06T05:32:47,477 | | 2025-09-06T05:32:47,477 | long unsigned int 2025-09-06T05:32:47,477 | %u 2025-09-06T05:32:47,477 202 | list_path, file_num, buf, strlen(buf), PATHLEN); 2025-09-06T05:32:47,477 | ~~~~~~~~~~~ 2025-09-06T05:32:47,477 | | 2025-09-06T05:32:47,478 | size_t {aka unsigned int} 2025-09-06T05:32:47,479 global_basic.c:233:69: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T05:32:47,480 233 | "the input list: %s\n %dth line: %s has %lu characters exceed the maximal allowed length %d", 2025-09-06T05:32:47,480 | ~~^ 2025-09-06T05:32:47,480 | | 2025-09-06T05:32:47,480 | long unsigned int 2025-09-06T05:32:47,480 | %u 2025-09-06T05:32:47,480 234 | list_path, file_num, buf, strlen(buf), PATHLEN); 2025-09-06T05:32:47,480 | ~~~~~~~~~~~ 2025-09-06T05:32:47,480 | | 2025-09-06T05:32:47,480 | size_t {aka unsigned int} 2025-09-06T05:32:47,510 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-06T05:32:47,652 ERROR: python setup.py bdist_wheel exited with 1 2025-09-06T05:32:47,664 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-06T05:32:47,664 exec(compile('"'"''"'"''"'"' 2025-09-06T05:32:47,664 # This is -- a caller that pip uses to run setup.py 2025-09-06T05:32:47,664 # 2025-09-06T05:32:47,664 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-06T05:32:47,664 # import from `distutils.core` to work with newer packaging standards. 2025-09-06T05:32:47,664 # - It provides a clear error message when setuptools is not installed. 2025-09-06T05:32:47,664 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-06T05:32:47,664 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-06T05:32:47,664 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-06T05:32:47,664 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-06T05:32:47,664 import os, sys, tokenize, traceback 2025-09-06T05:32:47,664 2025-09-06T05:32:47,664 try: 2025-09-06T05:32:47,664 import setuptools 2025-09-06T05:32:47,664 except ImportError: 2025-09-06T05:32:47,664 print( 2025-09-06T05:32:47,664 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-06T05:32:47,664 "the build environment with exception:", 2025-09-06T05:32:47,664 file=sys.stderr, 2025-09-06T05:32:47,664 ) 2025-09-06T05:32:47,664 traceback.print_exc() 2025-09-06T05:32:47,664 sys.exit(1) 2025-09-06T05:32:47,664 2025-09-06T05:32:47,664 __file__ = %r 2025-09-06T05:32:47,664 sys.argv[0] = __file__ 2025-09-06T05:32:47,664 2025-09-06T05:32:47,664 if os.path.exists(__file__): 2025-09-06T05:32:47,664 filename = __file__ 2025-09-06T05:32:47,664 with tokenize.open(__file__) as f: 2025-09-06T05:32:47,664 setup_py_code = f.read() 2025-09-06T05:32:47,664 else: 2025-09-06T05:32:47,664 filename = "" 2025-09-06T05:32:47,664 setup_py_code = "from setuptools import setup; setup()" 2025-09-06T05:32:47,664 2025-09-06T05:32:47,664 exec(compile(setup_py_code, filename, "exec")) 2025-09-06T05:32:47,664 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-6e81lctv/kssdutils_f1499dc45dbc4068b42e97afb656df87/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-t7p0l5xa[/] 2025-09-06T05:32:47,664 [bold magenta]cwd[/]: /tmp/pip-wheel-6e81lctv/kssdutils_f1499dc45dbc4068b42e97afb656df87/ 2025-09-06T05:32:47,664 Building wheel for kssdutils (setup.py): finished with status 'error' 2025-09-06T05:32:47,665 ERROR: Failed building wheel for kssdutils 2025-09-06T05:32:47,666 Running setup.py clean for kssdutils 2025-09-06T05:32:47,666 Running command python setup.py clean 2025-09-06T05:32:48,834 running clean 2025-09-06T05:32:48,978 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-06T05:32:48,978 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-06T05:32:48,979 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-06T05:32:48,979 'build/scripts-3.13' does not exist -- can't clean it 2025-09-06T05:32:48,979 removing 'build' 2025-09-06T05:32:49,089 Failed to build kssdutils 2025-09-06T05:32:49,090 ERROR: Failed to build one or more wheels 2025-09-06T05:32:49,091 Exception information: 2025-09-06T05:32:49,091 Traceback (most recent call last): 2025-09-06T05:32:49,091 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-06T05:32:49,091 status = _inner_run() 2025-09-06T05:32:49,091 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-06T05:32:49,091 return self.run(options, args) 2025-09-06T05:32:49,091 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-06T05:32:49,091 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-06T05:32:49,091 return func(self, options, args) 2025-09-06T05:32:49,091 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-06T05:32:49,091 raise CommandError("Failed to build one or more wheels") 2025-09-06T05:32:49,091 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-06T05:32:49,096 Removed build tracker: '/tmp/pip-build-tracker-ti2pa0au'