2025-09-06T20:28:43,446 Created temporary directory: /tmp/pip-build-tracker-qc0_e6_c 2025-09-06T20:28:43,447 Initialized build tracking at /tmp/pip-build-tracker-qc0_e6_c 2025-09-06T20:28:43,447 Created build tracker: /tmp/pip-build-tracker-qc0_e6_c 2025-09-06T20:28:43,447 Entered build tracker: /tmp/pip-build-tracker-qc0_e6_c 2025-09-06T20:28:43,447 Created temporary directory: /tmp/pip-wheel-czgl01at 2025-09-06T20:28:43,450 Created temporary directory: /tmp/pip-ephem-wheel-cache-rs7e8f02 2025-09-06T20:28:43,506 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-06T20:28:43,508 2 location(s) to search for versions of kssdutils: 2025-09-06T20:28:43,508 * https://pypi.org/simple/kssdutils/ 2025-09-06T20:28:43,508 * https://www.piwheels.org/simple/kssdutils/ 2025-09-06T20:28:43,508 Fetching project page and analyzing links: https://pypi.org/simple/kssdutils/ 2025-09-06T20:28:43,509 Getting page https://pypi.org/simple/kssdutils/ 2025-09-06T20:28:43,510 Found index url https://pypi.org/simple/ 2025-09-06T20:28:43,580 Fetched page https://pypi.org/simple/kssdutils/ as application/vnd.pypi.simple.v1+json 2025-09-06T20:28:43,582 Found link https://files.pythonhosted.org/packages/61/ef/1bdb91b53dbe31ea0be28ab2c2292994b6228b357a8d54b69ac642f81f01/kssdutils-1.0.0.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.0 2025-09-06T20:28:43,582 Found link https://files.pythonhosted.org/packages/6f/f6/cc67acf92ea770b5f6a8bd97d375432881861935beafe9ebd4031a73482c/kssdutils-1.0.1.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.1 2025-09-06T20:28:43,582 Found link https://files.pythonhosted.org/packages/57/17/dd41697db7220423d0ab77f9f035b9a347edc1edefc2c35d9890178cbe17/kssdutils-1.0.2.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.2 2025-09-06T20:28:43,582 Found link https://files.pythonhosted.org/packages/3e/92/7a94130bd54e0e3dd20c1a609aef2f24875b86e9d61752f63b500d3f86f5/kssdutils-1.0.3.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.3 2025-09-06T20:28:43,583 Found link https://files.pythonhosted.org/packages/42/01/15ec102f7ac6b4fc3158ba60de64598a005cefffc773fa69eecbd3c9b016/kssdutils-1.0.5.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.5 2025-09-06T20:28:43,583 Found link https://files.pythonhosted.org/packages/aa/08/08fa5f76478fd3dbe9534ad21332b5dc03826197935c2b696e189af49f0b/kssdutils-1.0.6.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.6 2025-09-06T20:28:43,583 Found link https://files.pythonhosted.org/packages/78/17/7776b7c3b149fedfb0fba98bce07fdf08cb53773dafa174f7fda9ce4df55/kssdutils-1.0.7.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.0.7 2025-09-06T20:28:43,583 Found link https://files.pythonhosted.org/packages/a7/50/138f2b5f98dcd2327609362e505af19857468da67dba88eaf6c8d8fdb83a/kssdutils-1.1.0.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.0 2025-09-06T20:28:43,583 Found link https://files.pythonhosted.org/packages/be/be/659d775f3dd37e727d782fa46b7b665e69a59c78312fa5fc1bad8640f980/kssdutils-1.1.2.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.2 2025-09-06T20:28:43,584 Found link https://files.pythonhosted.org/packages/d0/e9/badb25888a9e48aa82e2389e848aff81ae6affd17af96622974dc314ae52/kssdutils-1.1.3.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.3 2025-09-06T20:28:43,584 Found link https://files.pythonhosted.org/packages/b3/43/18e812a7529c356cfa20627f201f1956e4b8203e1db782861ad6e5900bf8/kssdutils-1.1.4.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.4 2025-09-06T20:28:43,584 Found link https://files.pythonhosted.org/packages/98/8c/0eb4850f10a9da51072d7be474ecffd0f808423f21838f543dc88db7ddd2/kssdutils-1.1.5.tar.gz (from https://pypi.org/simple/kssdutils/), version: 1.1.5 2025-09-06T20:28:43,584 Fetching project page and analyzing links: https://www.piwheels.org/simple/kssdutils/ 2025-09-06T20:28:43,585 Getting page https://www.piwheels.org/simple/kssdutils/ 2025-09-06T20:28:43,585 Found index url https://www.piwheels.org/simple/ 2025-09-06T20:28:43,667 Fetched page https://www.piwheels.org/simple/kssdutils/ as text/html 2025-09-06T20:28:43,675 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.5-cp311-cp311-linux_armv6l.whl#sha256=954571c31f45999b6eeb2cc007104d4a864f065c6aac3ff584a2e5d01fe7d22f (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,675 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.5-cp311-cp311-linux_armv7l.whl#sha256=954571c31f45999b6eeb2cc007104d4a864f065c6aac3ff584a2e5d01fe7d22f (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,675 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.4-cp311-cp311-linux_armv6l.whl#sha256=887ef39ec2c7cd34700ce800859855937714cdcebb02dcbd1c99aa7266df6c1b (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,675 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.4-cp311-cp311-linux_armv7l.whl#sha256=887ef39ec2c7cd34700ce800859855937714cdcebb02dcbd1c99aa7266df6c1b (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,676 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.3-cp311-cp311-linux_armv6l.whl#sha256=5584c66cba9b3b3dc5863d4eadba8674b765a709b4c7abc210ce12f9e49d68a3 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,676 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.3-cp311-cp311-linux_armv7l.whl#sha256=5584c66cba9b3b3dc5863d4eadba8674b765a709b4c7abc210ce12f9e49d68a3 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,676 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.2-cp311-cp311-linux_armv6l.whl#sha256=aae5676066e2d651e6883867221d727acb24b9ccd831cc4209fb7b18df10cfbb (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,676 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.2-cp311-cp311-linux_armv7l.whl#sha256=aae5676066e2d651e6883867221d727acb24b9ccd831cc4209fb7b18df10cfbb (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,676 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=0c8e77f57ec908176d8961c597a98abc9259dee9141399da1712be9b1d560bc8 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,676 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=0c8e77f57ec908176d8961c597a98abc9259dee9141399da1712be9b1d560bc8 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,676 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp311-cp311-linux_armv6l.whl#sha256=c45bd36d62b251ee659d4aeaaca8255ff10d29d84edaf2551a0fed903f1a5fe3 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,677 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp311-cp311-linux_armv7l.whl#sha256=c45bd36d62b251ee659d4aeaaca8255ff10d29d84edaf2551a0fed903f1a5fe3 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,677 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=fcc578373bf2b252b22da188e4ca939bebcc53786b1f302a901a5cf261df624e (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,677 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=fcc578373bf2b252b22da188e4ca939bebcc53786b1f302a901a5cf261df624e (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,677 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp311-cp311-linux_armv6l.whl#sha256=24cea74c37c72ec3f541e6eca026f6a906455d0e0160dc7d0f4526ab89a58125 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,677 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp311-cp311-linux_armv7l.whl#sha256=24cea74c37c72ec3f541e6eca026f6a906455d0e0160dc7d0f4526ab89a58125 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,677 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=bfe64af80d2aab63dccf6fb0418e3b806f4ee1b2fcff0eab77094040d2b6dca5 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,678 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=bfe64af80d2aab63dccf6fb0418e3b806f4ee1b2fcff0eab77094040d2b6dca5 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,678 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp311-cp311-linux_armv6l.whl#sha256=29ec8af3f080743643fee31ce978f3d65a6d90b950248e2ed6827316567aaa62 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,678 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp311-cp311-linux_armv7l.whl#sha256=29ec8af3f080743643fee31ce978f3d65a6d90b950248e2ed6827316567aaa62 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,678 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp39-cp39-linux_armv6l.whl#sha256=fb21de5c7d85619ac9cc1fafe3280f0130178032b169f1cf7ceac0cb6326d42e (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,678 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.5-cp39-cp39-linux_armv7l.whl#sha256=fb21de5c7d85619ac9cc1fafe3280f0130178032b169f1cf7ceac0cb6326d42e (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,678 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp311-cp311-linux_armv6l.whl#sha256=85c10f6c3223fb99e39dfddbef722fd2913bd5c63f089283ce23dae20c6a4a4d (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,678 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp311-cp311-linux_armv7l.whl#sha256=85c10f6c3223fb99e39dfddbef722fd2913bd5c63f089283ce23dae20c6a4a4d (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,679 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp39-cp39-linux_armv6l.whl#sha256=809195defd92c452797e9a87d99cfa8217c9ca4800c4a57d3e669846368160b1 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,679 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.2-cp39-cp39-linux_armv7l.whl#sha256=809195defd92c452797e9a87d99cfa8217c9ca4800c4a57d3e669846368160b1 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,679 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=88788d94e7e118cfdf4e2cb04c558d2032ffa4f9352b663efd1a76f098c9f31d (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,679 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=88788d94e7e118cfdf4e2cb04c558d2032ffa4f9352b663efd1a76f098c9f31d (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,679 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=29a695a62aae6fa18fcad3ae6bfc6bbe19f545f66740fde177ddbf23efa45d15 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,679 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=29a695a62aae6fa18fcad3ae6bfc6bbe19f545f66740fde177ddbf23efa45d15 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,680 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=e93f43f34a8ab412f6a0c97bc930a5c9c72997258d109e3f069a56b6270ff331 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,680 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=e93f43f34a8ab412f6a0c97bc930a5c9c72997258d109e3f069a56b6270ff331 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,680 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=0d9c0566cba326dbedbea1c1ea643cc81efe1b0b47b292f956e933d1a9fedb35 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,680 Skipping link: No binaries permitted for kssdutils: https://archive1.piwheels.org/simple/kssdutils/kssdutils-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=0d9c0566cba326dbedbea1c1ea643cc81efe1b0b47b292f956e933d1a9fedb35 (from https://www.piwheels.org/simple/kssdutils/) 2025-09-06T20:28:43,680 Skipping link: not a file: https://www.piwheels.org/simple/kssdutils/ 2025-09-06T20:28:43,680 Skipping link: not a file: https://pypi.org/simple/kssdutils/ 2025-09-06T20:28:43,706 Given no hashes to check 1 links for project 'kssdutils': discarding no candidates 2025-09-06T20:28:43,707 Collecting kssdutils==1.1.5 2025-09-06T20:28:43,709 Created temporary directory: /tmp/pip-unpack-wcp5n1i_ 2025-09-06T20:28:43,844 Downloading kssdutils-1.1.5.tar.gz (47 kB) 2025-09-06T20:28:43,903 Added kssdutils==1.1.5 from https://files.pythonhosted.org/packages/98/8c/0eb4850f10a9da51072d7be474ecffd0f808423f21838f543dc88db7ddd2/kssdutils-1.1.5.tar.gz to build tracker '/tmp/pip-build-tracker-qc0_e6_c' 2025-09-06T20:28:43,904 Running setup.py (path:/tmp/pip-wheel-czgl01at/kssdutils_9920ad85c0cf4ac08bf6804a27c86d25/setup.py) egg_info for package kssdutils 2025-09-06T20:28:43,904 Created temporary directory: /tmp/pip-pip-egg-info-zme9f4ey 2025-09-06T20:28:43,904 Preparing metadata (setup.py): started 2025-09-06T20:28:43,905 Running command python setup.py egg_info 2025-09-06T20:28:45,053 running egg_info 2025-09-06T20:28:45,126 creating /tmp/pip-pip-egg-info-zme9f4ey/kssdutils.egg-info 2025-09-06T20:28:45,127 writing /tmp/pip-pip-egg-info-zme9f4ey/kssdutils.egg-info/PKG-INFO 2025-09-06T20:28:45,128 writing dependency_links to /tmp/pip-pip-egg-info-zme9f4ey/kssdutils.egg-info/dependency_links.txt 2025-09-06T20:28:45,129 writing requirements to /tmp/pip-pip-egg-info-zme9f4ey/kssdutils.egg-info/requires.txt 2025-09-06T20:28:45,129 writing top-level names to /tmp/pip-pip-egg-info-zme9f4ey/kssdutils.egg-info/top_level.txt 2025-09-06T20:28:45,129 writing manifest file '/tmp/pip-pip-egg-info-zme9f4ey/kssdutils.egg-info/SOURCES.txt' 2025-09-06T20:28:45,419 reading manifest file '/tmp/pip-pip-egg-info-zme9f4ey/kssdutils.egg-info/SOURCES.txt' 2025-09-06T20:28:45,420 reading manifest template 'MANIFEST.in' 2025-09-06T20:28:45,424 writing manifest file '/tmp/pip-pip-egg-info-zme9f4ey/kssdutils.egg-info/SOURCES.txt' 2025-09-06T20:28:45,537 Preparing metadata (setup.py): finished with status 'done' 2025-09-06T20:28:45,542 Source in /tmp/pip-wheel-czgl01at/kssdutils_9920ad85c0cf4ac08bf6804a27c86d25 has version 1.1.5, which satisfies requirement kssdutils==1.1.5 from https://files.pythonhosted.org/packages/98/8c/0eb4850f10a9da51072d7be474ecffd0f808423f21838f543dc88db7ddd2/kssdutils-1.1.5.tar.gz 2025-09-06T20:28:45,542 Removed kssdutils==1.1.5 from https://files.pythonhosted.org/packages/98/8c/0eb4850f10a9da51072d7be474ecffd0f808423f21838f543dc88db7ddd2/kssdutils-1.1.5.tar.gz from build tracker '/tmp/pip-build-tracker-qc0_e6_c' 2025-09-06T20:28:45,546 Created temporary directory: /tmp/pip-unpack-yfxnbfes 2025-09-06T20:28:45,546 Created temporary directory: /tmp/pip-unpack-xc8ea770 2025-09-06T20:28:45,546 Building wheels for collected packages: kssdutils 2025-09-06T20:28:45,547 Created temporary directory: /tmp/pip-wheel-kk629rup 2025-09-06T20:28:45,548 DEPRECATION: Building 'kssdutils' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'kssdutils'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-06T20:28:45,549 Building wheel for kssdutils (setup.py): started 2025-09-06T20:28:45,550 Destination directory: /tmp/pip-wheel-kk629rup 2025-09-06T20:28:45,550 Running command python setup.py bdist_wheel 2025-09-06T20:28:46,627 running bdist_wheel 2025-09-06T20:28:46,989 running build 2025-09-06T20:28:46,990 running build_py 2025-09-06T20:28:47,066 creating build/lib.linux-armv7l-cpython-313 2025-09-06T20:28:47,067 copying kssdutils.py -> build/lib.linux-armv7l-cpython-313 2025-09-06T20:28:47,067 running egg_info 2025-09-06T20:28:47,143 writing kssdutils.egg-info/PKG-INFO 2025-09-06T20:28:47,144 writing dependency_links to kssdutils.egg-info/dependency_links.txt 2025-09-06T20:28:47,145 writing requirements to kssdutils.egg-info/requires.txt 2025-09-06T20:28:47,145 writing top-level names to kssdutils.egg-info/top_level.txt 2025-09-06T20:28:47,220 reading manifest file 'kssdutils.egg-info/SOURCES.txt' 2025-09-06T20:28:47,223 reading manifest template 'MANIFEST.in' 2025-09-06T20:28:47,227 writing manifest file 'kssdutils.egg-info/SOURCES.txt' 2025-09-06T20:28:47,227 running build_ext 2025-09-06T20:28:47,573 building 'kssdtool' extension 2025-09-06T20:28:47,575 creating build/temp.linux-armv7l-cpython-313 2025-09-06T20:28:47,576 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c co2mco.c -o build/temp.linux-armv7l-cpython-313/co2mco.o -fopenmp 2025-09-06T20:28:47,750 co2mco.c: In function ‘cdb_kmerf2kmerdb’: 2025-09-06T20:28:47,751 co2mco.c:109:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2025-09-06T20:28:47,751 109 | for (unsigned int i = 0; i < comp_num; i++) { 2025-09-06T20:28:47,751 | ^ 2025-09-06T20:28:47,754 co2mco.c: In function ‘co2unitllmco’: 2025-09-06T20:28:47,754 co2mco.c:191:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2025-09-06T20:28:47,755 191 | for (unsigned int i = 0; i < bin_sz; i++) { 2025-09-06T20:28:47,755 | ^ 2025-09-06T20:28:48,447 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_composite.c -o build/temp.linux-armv7l-cpython-313/command_composite.o -fopenmp 2025-09-06T20:28:48,830 command_composite.c: In function ‘get_species_abundance’: 2025-09-06T20:28:48,830 command_composite.c:32:72: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2025-09-06T20:28:48,831 32 | if (ref_dstat_fpath == NULL) fprintf(stderr, "cannot find %s under %s ", co_dstat, ref_dstat_fpath); 2025-09-06T20:28:48,831 | ^~ 2025-09-06T20:28:48,831 command_composite.c:34:72: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 2025-09-06T20:28:48,831 34 | if (qry_dstat_fpath == NULL) fprintf(stderr, "cannot find %s under %s ", co_dstat, qry_dstat_fpath); 2025-09-06T20:28:48,831 | ^~ 2025-09-06T20:28:48,832 command_composite.c:64:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:48,832 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2025-09-06T20:28:48,832 | ^ 2025-09-06T20:28:48,832 command_composite.c:64:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:48,832 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2025-09-06T20:28:48,833 | ^~~~~~~~~~ 2025-09-06T20:28:48,833 command_composite.c:64:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2025-09-06T20:28:48,833 64 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, skch_prefix, c); 2025-09-06T20:28:48,833 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:48,833 command_composite.c:70:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:48,834 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2025-09-06T20:28:48,834 | ^ 2025-09-06T20:28:48,834 command_composite.c:70:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:48,834 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2025-09-06T20:28:48,834 | ^~~~~~~~~~ 2025-09-06T20:28:48,834 command_composite.c:70:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2025-09-06T20:28:48,834 70 | sprintf(tmpfname, "%s/%s.%d", composite_opt->refdir, idx_prefix, c); 2025-09-06T20:28:48,835 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:48,835 command_composite.c:76:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:48,835 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2025-09-06T20:28:48,835 | ^ 2025-09-06T20:28:48,835 command_composite.c:76:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:48,835 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2025-09-06T20:28:48,836 | ^~~~~~~~~~ 2025-09-06T20:28:48,836 command_composite.c:76:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2025-09-06T20:28:48,836 76 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, skch_prefix, c); 2025-09-06T20:28:48,836 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:48,836 command_composite.c:82:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:48,836 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2025-09-06T20:28:48,837 | ^ 2025-09-06T20:28:48,837 command_composite.c:82:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:48,837 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2025-09-06T20:28:48,837 | ^~~~~~~~~~ 2025-09-06T20:28:48,837 command_composite.c:82:13: note: ‘sprintf’ output 4 or more bytes (assuming 269) into a destination of size 256 2025-09-06T20:28:48,837 82 | sprintf(tmpfname, "%s/%s.%d", composite_opt->qrydir, idx_prefix, c); 2025-09-06T20:28:48,838 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:48,838 command_composite.c:88:37: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:48,838 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2025-09-06T20:28:48,838 | ^ 2025-09-06T20:28:48,838 command_composite.c:88:31: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:48,838 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2025-09-06T20:28:48,839 | ^~~~~~~~~~~~ 2025-09-06T20:28:48,839 command_composite.c:88:13: note: ‘sprintf’ output 6 or more bytes (assuming 271) into a destination of size 256 2025-09-06T20:28:48,839 88 | sprintf(tmpfname, "%s/%s.%d.a", composite_opt->qrydir, skch_prefix, c); 2025-09-06T20:28:48,839 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:49,085 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_dist.c -o build/temp.linux-armv7l-cpython-313/command_dist.o -fopenmp 2025-09-06T20:28:49,314 command_dist.c: In function ‘mco_cbd_co_dist’: 2025-09-06T20:28:49,316 command_dist.c:677:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T20:28:49,316 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T20:28:49,316 | ~~^ 2025-09-06T20:28:49,316 | | 2025-09-06T20:28:49,316 | long unsigned int 2025-09-06T20:28:49,316 | %u 2025-09-06T20:28:49,316 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T20:28:49,316 | ~~~~~~~ 2025-09-06T20:28:49,316 | | 2025-09-06T20:28:49,317 | size_t {aka unsigned int} 2025-09-06T20:28:49,319 command_dist.c:677:92: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T20:28:49,319 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T20:28:49,319 | ~~^ 2025-09-06T20:28:49,319 | | 2025-09-06T20:28:49,319 | long unsigned int 2025-09-06T20:28:49,319 | %u 2025-09-06T20:28:49,319 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T20:28:49,319 679 | maplength, (size_t) b * unitsz_distf_mapped); 2025-09-06T20:28:49,319 | ~~~~~~~~~ 2025-09-06T20:28:49,319 | | 2025-09-06T20:28:49,320 | size_t {aka unsigned int} 2025-09-06T20:28:49,321 command_dist.c:677:97: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2025-09-06T20:28:49,322 677 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T20:28:49,322 | ~~^ 2025-09-06T20:28:49,322 | | 2025-09-06T20:28:49,322 | long unsigned int 2025-09-06T20:28:49,322 | %u 2025-09-06T20:28:49,322 678 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T20:28:49,322 679 | maplength, (size_t) b * unitsz_distf_mapped); 2025-09-06T20:28:49,322 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:49,322 | | 2025-09-06T20:28:49,322 | unsigned int 2025-09-06T20:28:49,326 command_dist.c:715:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-06T20:28:49,326 715 | for (int n = 0; n < fco_pos[k + 1] - fco_pos[k]; n++) { 2025-09-06T20:28:49,326 | ^ 2025-09-06T20:28:49,333 command_dist.c: In function ‘mco_cbdco_nobin_dist’: 2025-09-06T20:28:49,335 command_dist.c:863:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T20:28:49,335 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2025-09-06T20:28:49,335 | ~~^ ~~~~~~~ 2025-09-06T20:28:49,336 | | | 2025-09-06T20:28:49,336 | long unsigned int size_t {aka unsigned int} 2025-09-06T20:28:49,336 | %u 2025-09-06T20:28:49,339 command_dist.c:863:93: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T20:28:49,339 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2025-09-06T20:28:49,339 | ~~^ 2025-09-06T20:28:49,339 | | 2025-09-06T20:28:49,339 | long unsigned int 2025-09-06T20:28:49,339 | %u 2025-09-06T20:28:49,339 864 | mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, maplength, 2025-09-06T20:28:49,339 | ~~~~~~~~~ 2025-09-06T20:28:49,339 | | 2025-09-06T20:28:49,340 | size_t {aka unsigned int} 2025-09-06T20:28:49,342 command_dist.c:863:98: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2025-09-06T20:28:49,342 863 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%d\tbatch_qrynum=%d\t%lu\t%lu\n", disf_sz, 2025-09-06T20:28:49,342 | ~~^ 2025-09-06T20:28:49,342 | | 2025-09-06T20:28:49,342 | long unsigned int 2025-09-06T20:28:49,343 | %u 2025-09-06T20:28:49,343 864 | mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, maplength, 2025-09-06T20:28:49,343 865 | (size_t) b * unitsz_distf_mapped); 2025-09-06T20:28:49,343 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:49,343 | | 2025-09-06T20:28:49,343 | unsigned int 2025-09-06T20:28:49,346 command_dist.c:810:13: warning: unused variable ‘fco_pos’ [-Wunused-variable] 2025-09-06T20:28:49,346 810 | size_t *fco_pos = malloc(sizeof(size_t) * (co_dstat_readin.infile_num + 1)); 2025-09-06T20:28:49,346 | ^~~~~~~ 2025-09-06T20:28:49,347 command_dist.c:809:17: warning: unused variable ‘cbd_fcode_stat’ [-Wunused-variable] 2025-09-06T20:28:49,347 809 | struct stat cbd_fcode_stat; 2025-09-06T20:28:49,347 | ^~~~~~~~~~~~~~ 2025-09-06T20:28:49,348 command_dist.c:808:31: warning: unused variable ‘cbd_fcode_comp_index_fp’ [-Wunused-variable] 2025-09-06T20:28:49,348 808 | FILE *cbd_fcode_comp_fp, *cbd_fcode_comp_index_fp; 2025-09-06T20:28:49,349 | ^~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:49,350 command_dist.c:808:11: warning: unused variable ‘cbd_fcode_comp_fp’ [-Wunused-variable] 2025-09-06T20:28:49,350 808 | FILE *cbd_fcode_comp_fp, *cbd_fcode_comp_index_fp; 2025-09-06T20:28:49,350 | ^~~~~~~~~~~~~~~~~ 2025-09-06T20:28:49,359 command_dist.c: In function ‘mco_cbd_koc_compatible_dist’: 2025-09-06T20:28:49,362 command_dist.c:1018:27: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T20:28:49,362 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T20:28:49,362 | ~~^ 2025-09-06T20:28:49,362 | | 2025-09-06T20:28:49,362 | long unsigned int 2025-09-06T20:28:49,362 | %u 2025-09-06T20:28:49,362 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T20:28:49,362 | ~~~~~~~ 2025-09-06T20:28:49,362 | | 2025-09-06T20:28:49,363 | size_t {aka unsigned int} 2025-09-06T20:28:49,365 command_dist.c:1018:92: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T20:28:49,365 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T20:28:49,365 | ~~^ 2025-09-06T20:28:49,365 | | 2025-09-06T20:28:49,365 | long unsigned int 2025-09-06T20:28:49,365 | %u 2025-09-06T20:28:49,365 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T20:28:49,365 1020 | maplength, (size_t) b * unitsz_distf_mapped); 2025-09-06T20:28:49,365 | ~~~~~~~~~ 2025-09-06T20:28:49,365 | | 2025-09-06T20:28:49,366 | size_t {aka unsigned int} 2025-09-06T20:28:49,367 command_dist.c:1018:97: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘unsigned int’ [-Wformat=] 2025-09-06T20:28:49,368 1018 | printf("disf_sz=%lu\trefnum=%d\tqrynum=%d\tnum_mapping_distf=%dbnum_infile=%d\t\t%lu\t%lu\tflag1:Ok\n", 2025-09-06T20:28:49,368 | ~~^ 2025-09-06T20:28:49,368 | | 2025-09-06T20:28:49,368 | long unsigned int 2025-09-06T20:28:49,368 | %u 2025-09-06T20:28:49,368 1019 | disf_sz, mco_dstat_readin.infile_num, co_dstat_readin.infile_num, num_mapping_distf, bnum_infile, 2025-09-06T20:28:49,368 1020 | maplength, (size_t) b * unitsz_distf_mapped); 2025-09-06T20:28:49,368 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:49,368 | | 2025-09-06T20:28:49,368 | unsigned int 2025-09-06T20:28:49,373 command_dist.c: In function ‘mco_co_dist_core’: 2025-09-06T20:28:49,374 command_dist.c:1116:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘gidobj_t’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-06T20:28:49,374 1116 | for (int k = 1; k < unit_arrmco[ind][0] + 1; k++) { 2025-09-06T20:28:49,375 | ^ 2025-09-06T20:28:49,376 command_dist.c: In function ‘fname_dist_print’: 2025-09-06T20:28:49,377 command_dist.c:1163:25: warning: comparison of integer expressions of different signedness: ‘llong’ {aka ‘long long unsigned int’} and ‘__off64_t’ {aka ‘long long int’} [-Wsign-compare] 2025-09-06T20:28:49,377 1163 | for (llong i = 0; i < s.st_size / sizeof(ctx_obj_ct_t); i++) { 2025-09-06T20:28:49,377 | ^ 2025-09-06T20:28:49,382 command_dist.c: In function ‘koc_dist_print_nobin’: 2025-09-06T20:28:49,383 command_dist.c:1239:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T20:28:49,384 1239 | for (int rid = 0; rid < ref_num; rid++) 2025-09-06T20:28:49,384 | ^ 2025-09-06T20:28:49,386 command_dist.c:1245:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T20:28:49,386 1245 | for (int rid = 0; rid < ref_num; rid++) { 2025-09-06T20:28:49,386 | ^ 2025-09-06T20:28:49,392 command_dist.c: In function ‘dist_print_nobin’: 2025-09-06T20:28:49,393 command_dist.c:1335:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T20:28:49,393 1335 | if ((N_max > NREF) || (N_max > ref_num)) { 2025-09-06T20:28:49,393 | ^ 2025-09-06T20:28:49,396 command_dist.c:1356:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T20:28:49,396 1356 | for (int rid = 0; rid < ref_num; rid++) { 2025-09-06T20:28:49,397 | ^ 2025-09-06T20:28:49,399 command_dist.c:1382:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 2025-09-06T20:28:49,399 1382 | for (int rid = 0; rid < ref_num; rid++) 2025-09-06T20:28:49,399 | ^ 2025-09-06T20:28:49,787 command_dist.c: In function ‘run_stageI._omp_fn.1’: 2025-09-06T20:28:49,787 command_dist.c:403:21: warning: ‘com_abund_fp’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-06T20:28:49,787 403 | fwrite(tmp_mem, sizeof(unsigned short) * tmpkmerct, 1, com_abund_fp); 2025-09-06T20:28:49,788 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:49,788 command_dist.c:375:40: note: ‘com_abund_fp’ was declared here 2025-09-06T20:28:49,788 375 | FILE *com_cofp, *indexfp, *com_abund_fp; 2025-09-06T20:28:49,788 | ^~~~~~~~~~~~ 2025-09-06T20:28:50,591 command_dist.c: In function ‘get_dim_shuffle’: 2025-09-06T20:28:50,591 command_dist.c:267:36: warning: ‘%s’ directive writing up to 264 bytes into a region of size 256 [-Wformat-overflow=] 2025-09-06T20:28:50,591 267 | sprintf(shuf_infile_name, "%s.shuf", shuf_infile_name_prefix); 2025-09-06T20:28:50,592 | ^~ ~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:50,592 command_dist.c:267:9: note: ‘sprintf’ output between 6 and 270 bytes into a destination of size 256 2025-09-06T20:28:50,592 267 | sprintf(shuf_infile_name, "%s.shuf", shuf_infile_name_prefix); 2025-09-06T20:28:50,592 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,506 command_dist.c: In function ‘mco_cbd_co_dist’: 2025-09-06T20:28:51,507 command_dist.c:596:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:51,507 596 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T20:28:51,507 | ^~ ~~~~~~~~~ 2025-09-06T20:28:51,508 command_dist.c:596:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2025-09-06T20:28:51,508 596 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T20:28:51,508 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,509 command_dist.c:625:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:51,509 625 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T20:28:51,509 | ^~~~~~~~~~~~~~~ 2025-09-06T20:28:51,510 command_dist.c:625:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2025-09-06T20:28:51,510 625 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T20:28:51,510 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,512 command_dist.c:681:41: warning: ‘/mco.index.’ directive writing 11 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:51,512 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T20:28:51,512 | ^~~~~~~~~~~ 2025-09-06T20:28:51,513 command_dist.c:681:38: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:51,513 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T20:28:51,513 | ^~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,514 command_dist.c:681:13: note: ‘sprintf’ output between 13 and 278 bytes into a destination of size 256 2025-09-06T20:28:51,514 681 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T20:28:51,514 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,514 command_dist.c:682:35: warning: ‘/mco.’ directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:51,515 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T20:28:51,515 | ^~~~~ 2025-09-06T20:28:51,515 command_dist.c:682:32: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:51,515 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T20:28:51,516 | ^~~~~~~~~~~ 2025-09-06T20:28:51,516 command_dist.c:682:13: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2025-09-06T20:28:51,516 682 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T20:28:51,516 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,762 command_dist.c: In function ‘mco_cbdco_nobin_dist’: 2025-09-06T20:28:51,764 command_dist.c:763:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:51,764 763 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T20:28:51,764 | ^~ ~~~~~~~~~ 2025-09-06T20:28:51,765 command_dist.c:763:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2025-09-06T20:28:51,765 763 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T20:28:51,765 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,766 command_dist.c:790:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:51,766 790 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T20:28:51,766 | ^~~~~~~~~~~~~~~ 2025-09-06T20:28:51,767 command_dist.c:790:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2025-09-06T20:28:51,767 790 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T20:28:51,767 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,768 command_dist.c:823:23: warning: ‘/distance.out’ directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:51,768 823 | sprintf(distf, "%s/distance.out", distout_dir); 2025-09-06T20:28:51,768 | ^~~~~~~~~~~~~ 2025-09-06T20:28:51,769 command_dist.c:823:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2025-09-06T20:28:51,769 823 | sprintf(distf, "%s/distance.out", distout_dir); 2025-09-06T20:28:51,769 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,771 command_dist.c:849:39: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:51,771 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2025-09-06T20:28:51,771 | ^ 2025-09-06T20:28:51,772 command_dist.c:849:33: note: directive argument in the range [0, 536870912] 2025-09-06T20:28:51,772 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2025-09-06T20:28:51,772 | ^~~~~~~~~~ 2025-09-06T20:28:51,773 command_dist.c:849:8: note: ‘sprintf’ output 4 or more bytes (assuming 267) into a destination of size 256 2025-09-06T20:28:51,773 849 | sprintf(mco_index_fcode, "%s/%s.%d", refmco_dname, mco_idx_prefix, j); 2025-09-06T20:28:51,773 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:51,774 command_dist.c:851:34: warning: ‘.’ directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:51,774 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2025-09-06T20:28:51,774 | ^ 2025-09-06T20:28:51,775 command_dist.c:851:28: note: directive argument in the range [0, 536870912] 2025-09-06T20:28:51,775 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2025-09-06T20:28:51,775 | ^~~~~~~~~~ 2025-09-06T20:28:51,776 command_dist.c:851:9: note: ‘sprintf’ output 4 or more bytes (assuming 267) into a destination of size 256 2025-09-06T20:28:51,776 851 | sprintf(mco_fcode, "%s/%s.%d", refmco_dname, mco_gids_prefix, j); 2025-09-06T20:28:51,776 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,041 command_dist.c: In function ‘mco_cbd_koc_compatible_dist’: 2025-09-06T20:28:52,043 command_dist.c:927:37: warning: ‘%s’ directive writing 13 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:52,043 927 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T20:28:52,043 | ^~ ~~~~~~~~~ 2025-09-06T20:28:52,044 command_dist.c:927:5: note: ‘sprintf’ output between 15 and 270 bytes into a destination of size 256 2025-09-06T20:28:52,044 927 | sprintf(refmco_dstat_fpath, "%s/%s", refmco_dname, mco_dstat); 2025-09-06T20:28:52,044 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,046 command_dist.c:956:25: warning: ‘/sharedk_ct.dat’ directive writing 15 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:52,046 956 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T20:28:52,046 | ^~~~~~~~~~~~~~~ 2025-09-06T20:28:52,047 command_dist.c:956:5: note: ‘sprintf’ output between 16 and 271 bytes into a destination of size 256 2025-09-06T20:28:52,047 956 | sprintf(onedist, "%s/sharedk_ct.dat", distout_dir); 2025-09-06T20:28:52,047 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,048 command_dist.c:990:23: warning: ‘/distance.out’ directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:52,048 990 | sprintf(distf, "%s/distance.out", distout_dir); 2025-09-06T20:28:52,048 | ^~~~~~~~~~~~~ 2025-09-06T20:28:52,050 command_dist.c:990:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2025-09-06T20:28:52,050 990 | sprintf(distf, "%s/distance.out", distout_dir); 2025-09-06T20:28:52,050 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,052 command_dist.c:1022:41: warning: ‘/mco.index.’ directive writing 11 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:52,052 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T20:28:52,052 | ^~~~~~~~~~~ 2025-09-06T20:28:52,053 command_dist.c:1022:38: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:52,053 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T20:28:52,054 | ^~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,055 command_dist.c:1022:13: note: ‘sprintf’ output between 13 and 278 bytes into a destination of size 256 2025-09-06T20:28:52,055 1022 | sprintf(mco_index_fcode, "%s/mco.index.%d", refmco_dname, j); 2025-09-06T20:28:52,055 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,056 command_dist.c:1023:35: warning: ‘/mco.’ directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 2025-09-06T20:28:52,056 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T20:28:52,056 | ^~~~~ 2025-09-06T20:28:52,057 command_dist.c:1023:32: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:52,057 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T20:28:52,058 | ^~~~~~~~~~~ 2025-09-06T20:28:52,059 command_dist.c:1023:13: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2025-09-06T20:28:52,059 1023 | sprintf(mco_fcode, "%s/mco.%d", refmco_dname, j); 2025-09-06T20:28:52,059 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,335 command_dist.c: In function ‘combine_queries’: 2025-09-06T20:28:52,337 command_dist.c:1492:41: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:52,337 1492 | sprintf(one_kmerct_list_name, "%s/%s", co_dir, kmerct_list_fname); 2025-09-06T20:28:52,337 | ^ 2025-09-06T20:28:52,339 command_dist.c:1492:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T20:28:52,339 1492 | sprintf(one_kmerct_list_name, "%s/%s", co_dir, kmerct_list_fname); 2025-09-06T20:28:52,339 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,341 command_dist.c:1499:40: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:52,341 1499 | sprintf(one_infilename_name, "%s/%s", co_dir, fname_fname); 2025-09-06T20:28:52,341 | ^ 2025-09-06T20:28:52,343 command_dist.c:1499:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T20:28:52,343 1499 | sprintf(one_infilename_name, "%s/%s", co_dir, fname_fname); 2025-09-06T20:28:52,343 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,346 command_dist.c:1603:32: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:52,346 1603 | sprintf(one_stat_name, "%s/%s", co_dir, co_dstat); 2025-09-06T20:28:52,346 | ^~ ~~~~~~~~ 2025-09-06T20:28:52,348 command_dist.c:1603:5: note: ‘sprintf’ output between 14 and 269 bytes into a destination of size 256 2025-09-06T20:28:52,348 1603 | sprintf(one_stat_name, "%s/%s", co_dir, co_dstat); 2025-09-06T20:28:52,349 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:52,834 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_dist_wrapper.c -o build/temp.linux-armv7l-cpython-313/command_dist_wrapper.o -fopenmp 2025-09-06T20:28:53,011 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_set.c -o build/temp.linux-armv7l-cpython-313/command_set.o -fopenmp 2025-09-06T20:28:53,185 command_set.c: In function ‘sketch_operate’: 2025-09-06T20:28:53,186 command_set.c:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-06T20:28:53,186 178 | for(int n = 0; n < fco_pos[i+1] - fco_pos[i]; n++){ 2025-09-06T20:28:53,186 | ^ 2025-09-06T20:28:53,197 command_set.c: In function ‘combin_subset_pans’: 2025-09-06T20:28:53,198 command_set.c:457:10: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2025-09-06T20:28:53,198 457 | free(co_dstat_fpath); 2025-09-06T20:28:53,198 | ^~~~~~~~~~~~~~ 2025-09-06T20:28:53,198 In file included from kssdheaders/global_basic.h:159, 2025-09-06T20:28:53,198 from command_set.c:15: 2025-09-06T20:28:53,198 /usr/include/stdlib.h:687:25: note: expected ‘void *’ but argument is of type ‘const char *’ 2025-09-06T20:28:53,199 687 | extern void free (void *__ptr) __THROW; 2025-09-06T20:28:53,199 | ~~~~~~^~~~~ 2025-09-06T20:28:53,205 command_set.c: In function ‘grouping_genomes’: 2025-09-06T20:28:53,205 command_set.c:562:10: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2025-09-06T20:28:53,205 562 | free(co_dstat_fpath); 2025-09-06T20:28:53,205 | ^~~~~~~~~~~~~~ 2025-09-06T20:28:53,206 /usr/include/stdlib.h:687:25: note: expected ‘void *’ but argument is of type ‘const char *’ 2025-09-06T20:28:53,206 687 | extern void free (void *__ptr) __THROW; 2025-09-06T20:28:53,206 | ~~~~~~^~~~~ 2025-09-06T20:28:53,381 command_set.c: In function ‘sketch_union’: 2025-09-06T20:28:53,381 command_set.c:71:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:53,381 71 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:53,381 | ^ 2025-09-06T20:28:53,381 command_set.c:71:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T20:28:53,381 71 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:53,381 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,382 command_set.c:82:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,382 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T20:28:53,382 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:53,382 command_set.c:82:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,382 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T20:28:53,382 | ^~~~~~~~~~ 2025-09-06T20:28:53,382 command_set.c:82:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T20:28:53,382 82 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T20:28:53,382 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,382 command_set.c:92:29: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,383 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2025-09-06T20:28:53,383 | ^~ ~~~~~~~~~~ 2025-09-06T20:28:53,383 command_set.c:92:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,383 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2025-09-06T20:28:53,383 | ^~~~~~~~~~ 2025-09-06T20:28:53,383 command_set.c:92:9: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2025-09-06T20:28:53,383 92 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,pan_prefix,i); 2025-09-06T20:28:53,383 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,513 command_set.c: In function ‘sketch_operate’: 2025-09-06T20:28:53,513 command_set.c:153:29: warning: ‘%s’ directive writing 3 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,513 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2025-09-06T20:28:53,513 | ^~ ~~~~~~~~~~ 2025-09-06T20:28:53,513 command_set.c:153:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,513 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2025-09-06T20:28:53,513 | ^~~~~~~~~~ 2025-09-06T20:28:53,514 command_set.c:153:9: note: ‘sprintf’ output between 7 and 272 bytes into a destination of size 256 2025-09-06T20:28:53,514 153 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, pan_prefix, c); 2025-09-06T20:28:53,514 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,514 command_set.c:155:33: warning: ‘%s’ directive writing 8 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,514 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2025-09-06T20:28:53,514 | ^~ ~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,514 command_set.c:155:29: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,514 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2025-09-06T20:28:53,514 | ^~~~~~~~~~ 2025-09-06T20:28:53,514 command_set.c:155:13: note: ‘sprintf’ output between 12 and 277 bytes into a destination of size 256 2025-09-06T20:28:53,514 155 | sprintf(tmppath,"%s/%s.%d",set_opt.pansketchpath, uniq_pan_prefix, c); 2025-09-06T20:28:53,515 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,515 command_set.c:165:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,515 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T20:28:53,515 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:53,515 command_set.c:165:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,515 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T20:28:53,515 | ^~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,515 command_set.c:165:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T20:28:53,515 165 | sprintf(tmppath,"%s/%s.index.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T20:28:53,515 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,515 command_set.c:169:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,516 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T20:28:53,516 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:53,516 command_set.c:169:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,516 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T20:28:53,516 | ^~~~~~~~~~ 2025-09-06T20:28:53,516 command_set.c:169:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T20:28:53,516 169 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix, c); 2025-09-06T20:28:53,516 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,516 command_set.c:174:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,516 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T20:28:53,517 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:53,517 command_set.c:174:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,517 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T20:28:53,517 | ^~~~~~~~~~ 2025-09-06T20:28:53,517 command_set.c:174:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T20:28:53,517 174 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T20:28:53,517 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,517 command_set.c:187:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,517 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T20:28:53,517 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:53,517 command_set.c:187:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,517 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T20:28:53,518 | ^~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,518 command_set.c:187:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T20:28:53,518 187 | sprintf(tmppath,"%s/%s.index.%d",set_opt.outdir,skch_prefix, c); 2025-09-06T20:28:53,518 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,518 command_set.c:192:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:53,518 192 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:53,518 | ^ 2025-09-06T20:28:53,518 command_set.c:192:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T20:28:53,518 192 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:53,518 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,685 command_set.c: In function ‘uniq_sketch_union’: 2025-09-06T20:28:53,685 command_set.c:219:39: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:53,685 219 | sprintf(unionco,"%s.%d",uniq_pan_prefix,i); 2025-09-06T20:28:53,685 | ^ 2025-09-06T20:28:53,686 command_set.c:219:17: note: ‘sprintf’ output between 11 and 21 bytes into a destination of size 20 2025-09-06T20:28:53,686 219 | sprintf(unionco,"%s.%d",uniq_pan_prefix,i); 2025-09-06T20:28:53,686 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,686 command_set.c:234:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:53,686 234 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:53,686 | ^ 2025-09-06T20:28:53,686 command_set.c:234:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T20:28:53,686 234 | sprintf(outpath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:53,686 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,687 command_set.c:247:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,687 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T20:28:53,687 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:53,687 command_set.c:247:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,687 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T20:28:53,687 | ^~~~~~~~~~ 2025-09-06T20:28:53,687 command_set.c:247:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T20:28:53,687 247 | sprintf(outpath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,i); 2025-09-06T20:28:53,688 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,688 command_set.c:259:29: warning: ‘%s’ directive writing 8 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,688 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2025-09-06T20:28:53,688 | ^~ ~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,688 command_set.c:259:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:53,688 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2025-09-06T20:28:53,688 | ^~~~~~~~~~ 2025-09-06T20:28:53,689 command_set.c:259:9: note: ‘sprintf’ output between 12 and 277 bytes into a destination of size 256 2025-09-06T20:28:53,689 259 | sprintf(outpath,"%s/%s.%d",set_opt.outdir,uniq_pan_prefix,i); 2025-09-06T20:28:53,689 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,829 command_set.c: In function ‘combin_pans’: 2025-09-06T20:28:53,830 command_set.c:297:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,830 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:53,830 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:53,830 command_set.c:297:25: note: directive argument in the range [0, 1073741823] 2025-09-06T20:28:53,830 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:53,830 | ^~~~~~~~~~ 2025-09-06T20:28:53,830 command_set.c:297:9: note: ‘sprintf’ output between 10 and 274 bytes into a destination of size 256 2025-09-06T20:28:53,831 297 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:53,831 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,831 command_set.c:300:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:53,831 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:53,831 | ^~ ~~~~~~~~~~ 2025-09-06T20:28:53,831 command_set.c:300:25: note: directive argument in the range [0, 1073741823] 2025-09-06T20:28:53,831 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:53,832 | ^~~~~~~~~~ 2025-09-06T20:28:53,832 command_set.c:300:9: note: ‘sprintf’ output between 16 and 280 bytes into a destination of size 256 2025-09-06T20:28:53,832 300 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:53,832 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:53,833 command_set.c:342:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:53,833 342 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:53,833 | ^ 2025-09-06T20:28:53,833 command_set.c:342:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T20:28:53,833 342 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:53,833 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,050 command_set.c: In function ‘combin_subset_pans’: 2025-09-06T20:28:54,051 command_set.c:469:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:54,051 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T20:28:54,051 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:54,051 command_set.c:469:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:54,051 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T20:28:54,052 | ^~~~~~~~~~ 2025-09-06T20:28:54,052 command_set.c:469:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T20:28:54,052 469 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T20:28:54,052 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,053 command_set.c:475:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:54,053 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T20:28:54,053 | ^~ ~~~~~~~~~~ 2025-09-06T20:28:54,054 command_set.c:475:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:54,054 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T20:28:54,054 | ^~~~~~~~~~ 2025-09-06T20:28:54,054 command_set.c:475:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T20:28:54,054 475 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T20:28:54,054 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,055 command_set.c:481:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:54,055 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:54,055 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:54,056 command_set.c:481:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:54,056 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:54,056 | ^~~~~~~~~~ 2025-09-06T20:28:54,056 command_set.c:481:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T20:28:54,056 481 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:54,056 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,057 command_set.c:512:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:54,057 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:54,058 | ^~ ~~~~~~~~~~ 2025-09-06T20:28:54,058 command_set.c:512:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:54,058 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:54,058 | ^~~~~~~~~~ 2025-09-06T20:28:54,059 command_set.c:512:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T20:28:54,059 512 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:54,059 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,059 command_set.c:523:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:54,059 523 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:54,060 | ^ 2025-09-06T20:28:54,060 command_set.c:523:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T20:28:54,060 523 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:54,060 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,295 command_set.c: In function ‘grouping_genomes’: 2025-09-06T20:28:54,296 command_set.c:574:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:54,296 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T20:28:54,296 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:54,297 command_set.c:574:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:54,297 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T20:28:54,297 | ^~~~~~~~~~ 2025-09-06T20:28:54,297 command_set.c:574:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T20:28:54,298 574 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,skch_prefix,c); 2025-09-06T20:28:54,298 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,299 command_set.c:580:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:54,299 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T20:28:54,299 | ^~ ~~~~~~~~~~ 2025-09-06T20:28:54,299 command_set.c:580:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:54,299 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T20:28:54,299 | ^~~~~~~~~~ 2025-09-06T20:28:54,300 command_set.c:580:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T20:28:54,300 580 | sprintf(tmppath,"%s/%s.%d",set_opt.insketchpath,idx_prefix,c); 2025-09-06T20:28:54,300 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,301 command_set.c:612:29: warning: ‘%s’ directive writing 6 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:54,302 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:54,302 | ^~ ~~~~~~~~~~~ 2025-09-06T20:28:54,302 command_set.c:612:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:54,302 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:54,302 | ^~~~~~~~~~ 2025-09-06T20:28:54,303 command_set.c:612:9: note: ‘sprintf’ output between 10 and 275 bytes into a destination of size 256 2025-09-06T20:28:54,303 612 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,skch_prefix,c); 2025-09-06T20:28:54,303 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,304 command_set.c:634:29: warning: ‘%s’ directive writing 12 bytes into a region of size between 0 and 255 [-Wformat-overflow=] 2025-09-06T20:28:54,304 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:54,304 | ^~ ~~~~~~~~~~ 2025-09-06T20:28:54,305 command_set.c:634:25: note: directive argument in the range [-2147483641, 2147483646] 2025-09-06T20:28:54,305 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:54,305 | ^~~~~~~~~~ 2025-09-06T20:28:54,306 command_set.c:634:9: note: ‘sprintf’ output between 16 and 281 bytes into a destination of size 256 2025-09-06T20:28:54,306 634 | sprintf(tmppath,"%s/%s.%d",set_opt.outdir,idx_prefix,c); 2025-09-06T20:28:54,306 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,307 command_set.c:645:27: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 2025-09-06T20:28:54,307 645 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:54,307 | ^ 2025-09-06T20:28:54,308 command_set.c:645:5: note: ‘sprintf’ output 2 or more bytes (assuming 257) into a destination of size 256 2025-09-06T20:28:54,308 645 | sprintf(tmppath,"%s/%s",set_opt.outdir,co_dstat); 2025-09-06T20:28:54,308 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-06T20:28:54,588 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c command_shuffle.c -o build/temp.linux-armv7l-cpython-313/command_shuffle.o -fopenmp 2025-09-06T20:28:54,904 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ikssdheaders -I/usr/include/python3.13 -c global_basic.c -o build/temp.linux-armv7l-cpython-313/global_basic.o -fopenmp 2025-09-06T20:28:55,075 global_basic.c: In function ‘organize_infile_list’: 2025-09-06T20:28:55,075 global_basic.c:195:20: error: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 2025-09-06T20:28:55,075 195 | while (isspace(*buf)) buf++; 2025-09-06T20:28:55,075 | ^~~~~~~ 2025-09-06T20:28:55,075 global_basic.c:35:1: note: include ‘’ or provide a declaration of ‘isspace’ 2025-09-06T20:28:55,076 34 | #include 2025-09-06T20:28:55,076 +++ |+#include 2025-09-06T20:28:55,076 35 | 2025-09-06T20:28:55,076 global_basic.c:201:69: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T20:28:55,076 201 | "the input list: %s\n %dth line: %s has %lu characters exceed the maximal allowed length %d", 2025-09-06T20:28:55,076 | ~~^ 2025-09-06T20:28:55,076 | | 2025-09-06T20:28:55,076 | long unsigned int 2025-09-06T20:28:55,076 | %u 2025-09-06T20:28:55,077 202 | list_path, file_num, buf, strlen(buf), PATHLEN); 2025-09-06T20:28:55,077 | ~~~~~~~~~~~ 2025-09-06T20:28:55,077 | | 2025-09-06T20:28:55,077 | size_t {aka unsigned int} 2025-09-06T20:28:55,077 global_basic.c:233:69: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2025-09-06T20:28:55,078 233 | "the input list: %s\n %dth line: %s has %lu characters exceed the maximal allowed length %d", 2025-09-06T20:28:55,078 | ~~^ 2025-09-06T20:28:55,078 | | 2025-09-06T20:28:55,078 | long unsigned int 2025-09-06T20:28:55,078 | %u 2025-09-06T20:28:55,078 234 | list_path, file_num, buf, strlen(buf), PATHLEN); 2025-09-06T20:28:55,078 | ~~~~~~~~~~~ 2025-09-06T20:28:55,078 | | 2025-09-06T20:28:55,078 | size_t {aka unsigned int} 2025-09-06T20:28:55,097 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-06T20:28:55,245 ERROR: python setup.py bdist_wheel exited with 1 2025-09-06T20:28:55,256 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-06T20:28:55,256 exec(compile('"'"''"'"''"'"' 2025-09-06T20:28:55,256 # This is -- a caller that pip uses to run setup.py 2025-09-06T20:28:55,256 # 2025-09-06T20:28:55,256 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-06T20:28:55,256 # import from `distutils.core` to work with newer packaging standards. 2025-09-06T20:28:55,256 # - It provides a clear error message when setuptools is not installed. 2025-09-06T20:28:55,256 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-06T20:28:55,256 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-06T20:28:55,256 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-06T20:28:55,256 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-06T20:28:55,256 import os, sys, tokenize, traceback 2025-09-06T20:28:55,256 2025-09-06T20:28:55,256 try: 2025-09-06T20:28:55,256 import setuptools 2025-09-06T20:28:55,256 except ImportError: 2025-09-06T20:28:55,256 print( 2025-09-06T20:28:55,256 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-06T20:28:55,256 "the build environment with exception:", 2025-09-06T20:28:55,256 file=sys.stderr, 2025-09-06T20:28:55,256 ) 2025-09-06T20:28:55,256 traceback.print_exc() 2025-09-06T20:28:55,256 sys.exit(1) 2025-09-06T20:28:55,256 2025-09-06T20:28:55,256 __file__ = %r 2025-09-06T20:28:55,256 sys.argv[0] = __file__ 2025-09-06T20:28:55,256 2025-09-06T20:28:55,256 if os.path.exists(__file__): 2025-09-06T20:28:55,256 filename = __file__ 2025-09-06T20:28:55,256 with tokenize.open(__file__) as f: 2025-09-06T20:28:55,256 setup_py_code = f.read() 2025-09-06T20:28:55,256 else: 2025-09-06T20:28:55,256 filename = "" 2025-09-06T20:28:55,256 setup_py_code = "from setuptools import setup; setup()" 2025-09-06T20:28:55,256 2025-09-06T20:28:55,256 exec(compile(setup_py_code, filename, "exec")) 2025-09-06T20:28:55,256 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-czgl01at/kssdutils_9920ad85c0cf4ac08bf6804a27c86d25/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-kk629rup[/] 2025-09-06T20:28:55,256 [bold magenta]cwd[/]: /tmp/pip-wheel-czgl01at/kssdutils_9920ad85c0cf4ac08bf6804a27c86d25/ 2025-09-06T20:28:55,257 Building wheel for kssdutils (setup.py): finished with status 'error' 2025-09-06T20:28:55,257 ERROR: Failed building wheel for kssdutils 2025-09-06T20:28:55,258 Running setup.py clean for kssdutils 2025-09-06T20:28:55,259 Running command python setup.py clean 2025-09-06T20:28:56,439 running clean 2025-09-06T20:28:56,585 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-06T20:28:56,585 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-06T20:28:56,586 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-06T20:28:56,586 'build/scripts-3.13' does not exist -- can't clean it 2025-09-06T20:28:56,586 removing 'build' 2025-09-06T20:28:56,698 Failed to build kssdutils 2025-09-06T20:28:56,699 ERROR: Failed to build one or more wheels 2025-09-06T20:28:56,700 Exception information: 2025-09-06T20:28:56,700 Traceback (most recent call last): 2025-09-06T20:28:56,700 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-06T20:28:56,700 status = _inner_run() 2025-09-06T20:28:56,700 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-06T20:28:56,700 return self.run(options, args) 2025-09-06T20:28:56,700 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-06T20:28:56,700 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-06T20:28:56,700 return func(self, options, args) 2025-09-06T20:28:56,700 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-06T20:28:56,700 raise CommandError("Failed to build one or more wheels") 2025-09-06T20:28:56,700 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-06T20:28:56,705 Removed build tracker: '/tmp/pip-build-tracker-qc0_e6_c'