2025-09-07T22:26:39,065 Created temporary directory: /tmp/pip-build-tracker-86afh1l1 2025-09-07T22:26:39,065 Initialized build tracking at /tmp/pip-build-tracker-86afh1l1 2025-09-07T22:26:39,066 Created build tracker: /tmp/pip-build-tracker-86afh1l1 2025-09-07T22:26:39,066 Entered build tracker: /tmp/pip-build-tracker-86afh1l1 2025-09-07T22:26:39,066 Created temporary directory: /tmp/pip-wheel-dfjm7evk 2025-09-07T22:26:39,069 Created temporary directory: /tmp/pip-ephem-wheel-cache-z2hm_ttt 2025-09-07T22:26:39,124 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-07T22:26:39,127 2 location(s) to search for versions of pygp: 2025-09-07T22:26:39,127 * https://pypi.org/simple/pygp/ 2025-09-07T22:26:39,127 * https://www.piwheels.org/simple/pygp/ 2025-09-07T22:26:39,127 Fetching project page and analyzing links: https://pypi.org/simple/pygp/ 2025-09-07T22:26:39,127 Getting page https://pypi.org/simple/pygp/ 2025-09-07T22:26:39,128 Found index url https://pypi.org/simple/ 2025-09-07T22:26:39,341 Fetched page https://pypi.org/simple/pygp/ as application/vnd.pypi.simple.v1+json 2025-09-07T22:26:39,348 Found link https://files.pythonhosted.org/packages/14/d0/09717c0910c5511bfac1fe0e1b731bcbd73319426ab59276542b705dc19f/pygp-1.0.0.tar.gz (from https://pypi.org/simple/pygp/), version: 1.0.0 2025-09-07T22:26:39,349 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/de/3a/85bace59cb0ada4321fa669869b0b09b61968acaef126861d7b8f540c8f2/pygp-1.1.0a-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,349 Found link https://files.pythonhosted.org/packages/77/ce/3ecac1d99cac7769b214d30bfda717c530713f20bca3d0b4fd767743cbf4/pygp-1.1.0a.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.0a 2025-09-07T22:26:39,350 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b5/b5/68e3b31673193a00599f3bcea1a1113f9d1c3a109f5abb3b83192d0b19b0/pygp-1.1.02-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,350 Found link https://files.pythonhosted.org/packages/e4/aa/4f6a057639c081f3949d379c3529ed933861b21816bbc52d768cd8dd5dd4/pygp-1.1.02.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.02 2025-09-07T22:26:39,350 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/35/af/469b9cedcf36d87d6f43f5752001fe9ab75ec7d09f5b8a1deb4aa4e4fe99/pygp-1.1.03-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,351 Found link https://files.pythonhosted.org/packages/ff/e3/02a79e362f7492372d9b42577a33c29f9f6aaedcfc4491f27920feb79ba4/pygp-1.1.03.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.03 2025-09-07T22:26:39,351 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/69/10/76d0394004c6bd1330ce8d1848e36ca7b605a99dc07fcaebdfebfa32041c/pygp-1.1.04-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,352 Found link https://files.pythonhosted.org/packages/c8/16/67fd10420216d456ed3929c971ddae44d8ebb6ddf31fc3f69302ebac618a/pygp-1.1.04.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.04 2025-09-07T22:26:39,352 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9f/93/aeb291f72a1bda32a6e191ca26ae9ae630521abcf5b9f9fb94edf78939e6/pygp-1.1.05-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,353 Found link https://files.pythonhosted.org/packages/d8/85/5131e33bc836ea86fadb6bd526884d927805e500cd98a3a05d8e95d59135/pygp-1.1.05.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.05 2025-09-07T22:26:39,353 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b0/a5/671393e38247208d3df601c448cea676dacc6ac6fed8a46bc1f6fec272d7/pygp-1.1.06-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,353 Found link https://files.pythonhosted.org/packages/e5/ac/805908ba89a2ae11054523965c79aaa29d8f99f97115188e7b2c79479e6f/pygp-1.1.06.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.06 2025-09-07T22:26:39,354 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/b2/97/047a74fd566aebdf2db81556dc823676decb7f074b90f46bfac7742bb094/pygp-1.1.07-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,354 Found link https://files.pythonhosted.org/packages/37/19/298ab7f15a5c1f90f8c3cf3d086e67dfd959bbd297c98cb744ca5eddc814/pygp-1.1.07.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.07 2025-09-07T22:26:39,354 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/5d/f4/a7a157f642e3e71c1140b9e7230946e9298ff1825466b141f0d166234fa5/pygp-1.1.08-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,354 Found link https://files.pythonhosted.org/packages/9b/04/c47b312d9bdf6a916d02b90ae0c3f58037482ddf9fa97e89eb670e7da9bf/pygp-1.1.08.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.08 2025-09-07T22:26:39,354 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e0/69/7fc4e19b772eede94681aebbf54b869e0e944c743bb8ba40e5b5bbfa4150/pygp-1.1.09-py2.7.egg (from https://pypi.org/simple/pygp/) 2025-09-07T22:26:39,355 Found link https://files.pythonhosted.org/packages/ce/7d/7647fdf5de3c1a2f6f05561b21bfa1e1e41e6419770f02a08609e7bc6a73/pygp-1.1.09.linux-x86_64.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.09.linux-x86_64 2025-09-07T22:26:39,355 Found link https://files.pythonhosted.org/packages/0d/60/f64afc3fe982758c6d329d859aab8182d44460022b9447df490241617e46/pygp-1.1.09.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.09 2025-09-07T22:26:39,355 Found link https://files.pythonhosted.org/packages/3f/4b/064b791c85534ac363ef2fad95f074b5902a693ad3d2539a2566ccd1cc07/pygp-1.1.10.linux-x86_64.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.10.linux-x86_64 2025-09-07T22:26:39,355 Found link https://files.pythonhosted.org/packages/6f/91/bf1be1c116f7cb79c4140565aa5bbaa9e6c4699bf032d5502d90db2e5dc4/pygp-1.1.10.tar.gz (from https://pypi.org/simple/pygp/), version: 1.1.10 2025-09-07T22:26:39,356 Fetching project page and analyzing links: https://www.piwheels.org/simple/pygp/ 2025-09-07T22:26:39,356 Getting page https://www.piwheels.org/simple/pygp/ 2025-09-07T22:26:39,357 Found index url https://www.piwheels.org/simple/ 2025-09-07T22:26:39,470 Fetched page https://www.piwheels.org/simple/pygp/ as text/html 2025-09-07T22:26:39,473 Skipping link: No binaries permitted for pygp: https://archive1.piwheels.org/simple/pygp/pygp-1.1.10-py3-none-any.whl#sha256=62a5c55c730e55e8edb4073625f6bc54ab4712845338958bc0c886899bdd73b3 (from https://www.piwheels.org/simple/pygp/) 2025-09-07T22:26:39,473 Skipping link: No binaries permitted for pygp: https://archive1.piwheels.org/simple/pygp/pygp-1.1.9-py3-none-any.whl#sha256=06f309b31d2146c619e716653e9e8e421e872556bbbf71bcf865aa1a4863379c (from https://www.piwheels.org/simple/pygp/) 2025-09-07T22:26:39,473 Skipping link: No binaries permitted for pygp: https://archive1.piwheels.org/simple/pygp/pygp-1.1.8-py3-none-any.whl#sha256=e801845cb793c31f85b31d95e269d7098282677e8ab990c1e6b10616d881cf7a (from https://www.piwheels.org/simple/pygp/) 2025-09-07T22:26:39,474 Skipping link: No binaries permitted for pygp: https://archive1.piwheels.org/simple/pygp/pygp-1.1.7-py3-none-any.whl#sha256=3738d70d8de3367851f127b779857015752252e16009c994d400b640b1cc5d2d (from https://www.piwheels.org/simple/pygp/) 2025-09-07T22:26:39,474 Skipping link: No binaries permitted for pygp: https://archive1.piwheels.org/simple/pygp/pygp-1.1.6-py3-none-any.whl#sha256=50dc2800e6e86a96a4986e212526abe39b1dc8095a055b065c8563f2dc1e504f (from https://www.piwheels.org/simple/pygp/) 2025-09-07T22:26:39,474 Skipping link: No binaries permitted for pygp: https://archive1.piwheels.org/simple/pygp/pygp-1.1.2-py3-none-any.whl#sha256=e0b8b4c84d1a6c4d6131b680d1b3989b1c24f6c605cc135f1f3f12bff6ffc6c9 (from https://www.piwheels.org/simple/pygp/) 2025-09-07T22:26:39,474 Skipping link: No binaries permitted for pygp: https://archive1.piwheels.org/simple/pygp/pygp-1.1.0a0-py3-none-any.whl#sha256=f20a752a391d10ace9440f32926acb18e82a4aca3fbc5cd3ac17308d30804b4d (from https://www.piwheels.org/simple/pygp/) 2025-09-07T22:26:39,474 Skipping link: No binaries permitted for pygp: https://archive1.piwheels.org/simple/pygp/pygp-1.0.0-py3-none-any.whl#sha256=8f0cae6136c783cae81c8cccc41d0e8de0780f127c4937ca1647157df531d04a (from https://www.piwheels.org/simple/pygp/) 2025-09-07T22:26:39,475 Skipping link: not a file: https://www.piwheels.org/simple/pygp/ 2025-09-07T22:26:39,475 Skipping link: not a file: https://pypi.org/simple/pygp/ 2025-09-07T22:26:39,505 Given no hashes to check 1 links for project 'pygp': discarding no candidates 2025-09-07T22:26:39,506 Collecting pygp==1.1.03 2025-09-07T22:26:39,507 Created temporary directory: /tmp/pip-unpack-630i8daa 2025-09-07T22:26:39,754 Downloading pygp-1.1.03.tar.gz (75 kB) 2025-09-07T22:26:39,824 Added pygp==1.1.03 from https://files.pythonhosted.org/packages/ff/e3/02a79e362f7492372d9b42577a33c29f9f6aaedcfc4491f27920feb79ba4/pygp-1.1.03.tar.gz to build tracker '/tmp/pip-build-tracker-86afh1l1' 2025-09-07T22:26:39,825 Running setup.py (path:/tmp/pip-wheel-dfjm7evk/pygp_b1977eb94da44a2f82ec097d79de1439/setup.py) egg_info for package pygp 2025-09-07T22:26:39,826 Created temporary directory: /tmp/pip-pip-egg-info-pylbsozt 2025-09-07T22:26:39,826 Preparing metadata (setup.py): started 2025-09-07T22:26:39,827 Running command python setup.py egg_info 2025-09-07T22:26:40,893 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '1.1.03' to '1.1.3' 2025-09-07T22:26:40,893 self.metadata.version = self._normalize_version(self.metadata.version) 2025-09-07T22:26:40,968 running egg_info 2025-09-07T22:26:41,041 creating /tmp/pip-pip-egg-info-pylbsozt/pygp.egg-info 2025-09-07T22:26:41,042 writing /tmp/pip-pip-egg-info-pylbsozt/pygp.egg-info/PKG-INFO 2025-09-07T22:26:41,043 /usr/local/lib/python3.13/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. 2025-09-07T22:26:41,043 !! 2025-09-07T22:26:41,043 ******************************************************************************** 2025-09-07T22:26:41,043 newlines are not allowed in `summary` and will break in the future 2025-09-07T22:26:41,043 ******************************************************************************** 2025-09-07T22:26:41,044 !! 2025-09-07T22:26:41,044 write_field('Summary', single_line(summary)) 2025-09-07T22:26:41,044 writing dependency_links to /tmp/pip-pip-egg-info-pylbsozt/pygp.egg-info/dependency_links.txt 2025-09-07T22:26:41,044 writing requirements to /tmp/pip-pip-egg-info-pylbsozt/pygp.egg-info/requires.txt 2025-09-07T22:26:41,044 writing top-level names to /tmp/pip-pip-egg-info-pylbsozt/pygp.egg-info/top_level.txt 2025-09-07T22:26:41,045 writing manifest file '/tmp/pip-pip-egg-info-pylbsozt/pygp.egg-info/SOURCES.txt' 2025-09-07T22:26:41,274 reading manifest file '/tmp/pip-pip-egg-info-pylbsozt/pygp.egg-info/SOURCES.txt' 2025-09-07T22:26:41,275 reading manifest template 'MANIFEST.in' 2025-09-07T22:26:41,276 warning: no files found matching 'html/*.html' under directory 'pygp/doc' 2025-09-07T22:26:41,276 warning: no files found matching 'html/_static/*' under directory 'pygp/doc' 2025-09-07T22:26:41,277 warning: no files found matching 'html/_sources/*' under directory 'pygp/doc' 2025-09-07T22:26:41,277 warning: no files found matching 'html/_images/*' under directory 'pygp/doc' 2025-09-07T22:26:41,280 writing manifest file '/tmp/pip-pip-egg-info-pylbsozt/pygp.egg-info/SOURCES.txt' 2025-09-07T22:26:41,393 Preparing metadata (setup.py): finished with status 'done' 2025-09-07T22:26:41,397 Source in /tmp/pip-wheel-dfjm7evk/pygp_b1977eb94da44a2f82ec097d79de1439 has version 1.1.3, which satisfies requirement pygp==1.1.03 from https://files.pythonhosted.org/packages/ff/e3/02a79e362f7492372d9b42577a33c29f9f6aaedcfc4491f27920feb79ba4/pygp-1.1.03.tar.gz 2025-09-07T22:26:41,398 Removed pygp==1.1.03 from https://files.pythonhosted.org/packages/ff/e3/02a79e362f7492372d9b42577a33c29f9f6aaedcfc4491f27920feb79ba4/pygp-1.1.03.tar.gz from build tracker '/tmp/pip-build-tracker-86afh1l1' 2025-09-07T22:26:41,401 Created temporary directory: /tmp/pip-unpack-pbd_8vbo 2025-09-07T22:26:41,401 Created temporary directory: /tmp/pip-unpack-3qovfjo1 2025-09-07T22:26:41,402 Building wheels for collected packages: pygp 2025-09-07T22:26:41,403 Created temporary directory: /tmp/pip-wheel-v37cqymd 2025-09-07T22:26:41,403 DEPRECATION: Building 'pygp' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'pygp'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-07T22:26:41,405 Building wheel for pygp (setup.py): started 2025-09-07T22:26:41,406 Destination directory: /tmp/pip-wheel-v37cqymd 2025-09-07T22:26:41,406 Running command python setup.py bdist_wheel 2025-09-07T22:26:42,484 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '1.1.03' to '1.1.3' 2025-09-07T22:26:42,485 self.metadata.version = self._normalize_version(self.metadata.version) 2025-09-07T22:26:42,488 running bdist_wheel 2025-09-07T22:26:42,855 running build 2025-09-07T22:26:42,855 running build_py 2025-09-07T22:26:42,931 creating build/lib/pygp 2025-09-07T22:26:42,932 copying pygp/__init__.py -> build/lib/pygp 2025-09-07T22:26:42,933 creating build/lib/pygp/covar 2025-09-07T22:26:42,933 copying pygp/covar/fixed.py -> build/lib/pygp/covar 2025-09-07T22:26:42,934 copying pygp/covar/__init__.py -> build/lib/pygp/covar 2025-09-07T22:26:42,934 copying pygp/covar/bias.py -> build/lib/pygp/covar 2025-09-07T22:26:42,935 copying pygp/covar/dist.py -> build/lib/pygp/covar 2025-09-07T22:26:42,935 copying pygp/covar/breakpoint.py -> build/lib/pygp/covar 2025-09-07T22:26:42,936 copying pygp/covar/combinators.py -> build/lib/pygp/covar 2025-09-07T22:26:42,936 copying pygp/covar/gradcheck.py -> build/lib/pygp/covar 2025-09-07T22:26:42,937 copying pygp/covar/se.py -> build/lib/pygp/covar 2025-09-07T22:26:42,938 copying pygp/covar/noise.py -> build/lib/pygp/covar 2025-09-07T22:26:42,938 copying pygp/covar/delta.py -> build/lib/pygp/covar 2025-09-07T22:26:42,939 copying pygp/covar/covar_base.py -> build/lib/pygp/covar 2025-09-07T22:26:42,939 copying pygp/covar/linear.py -> build/lib/pygp/covar 2025-09-07T22:26:42,940 creating build/lib/pygp/gp 2025-09-07T22:26:42,940 copying pygp/gp/shared_latent_bayesian_gplvm.py -> build/lib/pygp/gp 2025-09-07T22:26:42,941 copying pygp/gp/bayesian_gplvm.py -> build/lib/pygp/gp 2025-09-07T22:26:42,942 copying pygp/gp/gp_base.py -> build/lib/pygp/gp 2025-09-07T22:26:42,942 copying pygp/gp/gplvm.py -> build/lib/pygp/gp 2025-09-07T22:26:42,943 copying pygp/gp/__init__.py -> build/lib/pygp/gp 2025-09-07T22:26:42,943 copying pygp/gp/warped_gp.py -> build/lib/pygp/gp 2025-09-07T22:26:42,944 copying pygp/gp/kronecker_gplvm.py -> build/lib/pygp/gp 2025-09-07T22:26:42,944 copying pygp/gp/composite.py -> build/lib/pygp/gp 2025-09-07T22:26:42,945 copying pygp/gp/gpcEP.py -> build/lib/pygp/gp 2025-09-07T22:26:42,945 copying pygp/gp/gprEP.py -> build/lib/pygp/gp 2025-09-07T22:26:42,946 copying pygp/gp/var_gp.py -> build/lib/pygp/gp 2025-09-07T22:26:42,946 creating build/lib/pygp/likelihood 2025-09-07T22:26:42,947 copying pygp/likelihood/__init__.py -> build/lib/pygp/likelihood 2025-09-07T22:26:42,947 copying pygp/likelihood/likelihood_base.py -> build/lib/pygp/likelihood 2025-09-07T22:26:42,948 copying pygp/likelihood/EP.py -> build/lib/pygp/likelihood 2025-09-07T22:26:42,949 creating build/lib/pygp/linalg 2025-09-07T22:26:42,949 copying pygp/linalg/linalg_matrix.py -> build/lib/pygp/linalg 2025-09-07T22:26:42,949 copying pygp/linalg/__init__.py -> build/lib/pygp/linalg 2025-09-07T22:26:42,950 creating build/lib/pygp/optimize 2025-09-07T22:26:42,950 copying pygp/optimize/__init__.py -> build/lib/pygp/optimize 2025-09-07T22:26:42,951 copying pygp/optimize/optimize_base.py -> build/lib/pygp/optimize 2025-09-07T22:26:42,952 creating build/lib/pygp/plot 2025-09-07T22:26:42,952 copying pygp/plot/__init__.py -> build/lib/pygp/plot 2025-09-07T22:26:42,952 copying pygp/plot/gpr_plot.py -> build/lib/pygp/plot 2025-09-07T22:26:42,953 creating build/lib/pygp/priors 2025-09-07T22:26:42,953 copying pygp/priors/__init__.py -> build/lib/pygp/priors 2025-09-07T22:26:42,954 copying pygp/priors/lnpriors.py -> build/lib/pygp/priors 2025-09-07T22:26:42,955 creating build/lib/pygp/demo 2025-09-07T22:26:42,955 copying pygp/demo/__init__.py -> build/lib/pygp/demo 2025-09-07T22:26:42,955 copying pygp/demo/demo_warped.py -> build/lib/pygp/demo 2025-09-07T22:26:42,956 copying pygp/demo/demo_gpr_shiftx.py -> build/lib/pygp/demo 2025-09-07T22:26:42,956 copying pygp/demo/demo_gpr.py -> build/lib/pygp/demo 2025-09-07T22:26:42,957 copying pygp/demo/demo_bayesian_gplvm.py -> build/lib/pygp/demo 2025-09-07T22:26:42,957 copying pygp/demo/demo_gplvm.py -> build/lib/pygp/demo 2025-09-07T22:26:42,958 creating build/lib/pygp/util 2025-09-07T22:26:42,958 copying pygp/util/__init__.py -> build/lib/pygp/util 2025-09-07T22:26:42,959 copying pygp/util/pca.py -> build/lib/pygp/util 2025-09-07T22:26:42,959 running egg_info 2025-09-07T22:26:43,036 writing pygp.egg-info/PKG-INFO 2025-09-07T22:26:43,037 /usr/local/lib/python3.13/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. 2025-09-07T22:26:43,037 !! 2025-09-07T22:26:43,037 ******************************************************************************** 2025-09-07T22:26:43,037 newlines are not allowed in `summary` and will break in the future 2025-09-07T22:26:43,038 ******************************************************************************** 2025-09-07T22:26:43,038 !! 2025-09-07T22:26:43,038 write_field('Summary', single_line(summary)) 2025-09-07T22:26:43,038 writing dependency_links to pygp.egg-info/dependency_links.txt 2025-09-07T22:26:43,038 writing requirements to pygp.egg-info/requires.txt 2025-09-07T22:26:43,039 writing top-level names to pygp.egg-info/top_level.txt 2025-09-07T22:26:43,120 reading manifest file 'pygp.egg-info/SOURCES.txt' 2025-09-07T22:26:43,124 reading manifest template 'MANIFEST.in' 2025-09-07T22:26:43,125 warning: no files found matching 'html/*.html' under directory 'pygp/doc' 2025-09-07T22:26:43,125 warning: no files found matching 'html/_static/*' under directory 'pygp/doc' 2025-09-07T22:26:43,125 warning: no files found matching 'html/_sources/*' under directory 'pygp/doc' 2025-09-07T22:26:43,125 warning: no files found matching 'html/_images/*' under directory 'pygp/doc' 2025-09-07T22:26:43,129 writing manifest file 'pygp.egg-info/SOURCES.txt' 2025-09-07T22:26:43,133 copying pygp/LICENSE.txt -> build/lib/pygp 2025-09-07T22:26:43,210 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-07T22:26:43,210 !! 2025-09-07T22:26:43,211 ******************************************************************************** 2025-09-07T22:26:43,211 Please avoid running ``setup.py`` directly. 2025-09-07T22:26:43,211 Instead, use pypa/build, pypa/installer or other 2025-09-07T22:26:43,211 standards-based tools. 2025-09-07T22:26:43,211 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-07T22:26:43,211 or your builds will no longer be supported. 2025-09-07T22:26:43,211 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-07T22:26:43,211 ******************************************************************************** 2025-09-07T22:26:43,212 !! 2025-09-07T22:26:43,212 self.initialize_options() 2025-09-07T22:26:43,283 installing to build/bdist.linux-armv7l/wheel 2025-09-07T22:26:43,283 running install 2025-09-07T22:26:43,306 running install_lib 2025-09-07T22:26:43,379 creating build/bdist.linux-armv7l/wheel 2025-09-07T22:26:43,380 creating build/bdist.linux-armv7l/wheel/pygp 2025-09-07T22:26:43,380 copying build/lib/pygp/LICENSE.txt -> build/bdist.linux-armv7l/wheel/./pygp 2025-09-07T22:26:43,380 creating build/bdist.linux-armv7l/wheel/pygp/util 2025-09-07T22:26:43,381 copying build/lib/pygp/util/pca.py -> build/bdist.linux-armv7l/wheel/./pygp/util 2025-09-07T22:26:43,381 copying build/lib/pygp/util/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/util 2025-09-07T22:26:43,382 creating build/bdist.linux-armv7l/wheel/pygp/demo 2025-09-07T22:26:43,382 copying build/lib/pygp/demo/demo_gplvm.py -> build/bdist.linux-armv7l/wheel/./pygp/demo 2025-09-07T22:26:43,382 copying build/lib/pygp/demo/demo_bayesian_gplvm.py -> build/bdist.linux-armv7l/wheel/./pygp/demo 2025-09-07T22:26:43,383 copying build/lib/pygp/demo/demo_gpr.py -> build/bdist.linux-armv7l/wheel/./pygp/demo 2025-09-07T22:26:43,383 copying build/lib/pygp/demo/demo_gpr_shiftx.py -> build/bdist.linux-armv7l/wheel/./pygp/demo 2025-09-07T22:26:43,384 copying build/lib/pygp/demo/demo_warped.py -> build/bdist.linux-armv7l/wheel/./pygp/demo 2025-09-07T22:26:43,384 copying build/lib/pygp/demo/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/demo 2025-09-07T22:26:43,384 creating build/bdist.linux-armv7l/wheel/pygp/priors 2025-09-07T22:26:43,385 copying build/lib/pygp/priors/lnpriors.py -> build/bdist.linux-armv7l/wheel/./pygp/priors 2025-09-07T22:26:43,385 copying build/lib/pygp/priors/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/priors 2025-09-07T22:26:43,386 creating build/bdist.linux-armv7l/wheel/pygp/plot 2025-09-07T22:26:43,386 copying build/lib/pygp/plot/gpr_plot.py -> build/bdist.linux-armv7l/wheel/./pygp/plot 2025-09-07T22:26:43,386 copying build/lib/pygp/plot/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/plot 2025-09-07T22:26:43,387 creating build/bdist.linux-armv7l/wheel/pygp/optimize 2025-09-07T22:26:43,387 copying build/lib/pygp/optimize/optimize_base.py -> build/bdist.linux-armv7l/wheel/./pygp/optimize 2025-09-07T22:26:43,387 copying build/lib/pygp/optimize/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/optimize 2025-09-07T22:26:43,388 creating build/bdist.linux-armv7l/wheel/pygp/linalg 2025-09-07T22:26:43,388 copying build/lib/pygp/linalg/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/linalg 2025-09-07T22:26:43,389 copying build/lib/pygp/linalg/linalg_matrix.py -> build/bdist.linux-armv7l/wheel/./pygp/linalg 2025-09-07T22:26:43,389 creating build/bdist.linux-armv7l/wheel/pygp/likelihood 2025-09-07T22:26:43,389 copying build/lib/pygp/likelihood/EP.py -> build/bdist.linux-armv7l/wheel/./pygp/likelihood 2025-09-07T22:26:43,390 copying build/lib/pygp/likelihood/likelihood_base.py -> build/bdist.linux-armv7l/wheel/./pygp/likelihood 2025-09-07T22:26:43,390 copying build/lib/pygp/likelihood/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/likelihood 2025-09-07T22:26:43,391 creating build/bdist.linux-armv7l/wheel/pygp/gp 2025-09-07T22:26:43,391 copying build/lib/pygp/gp/var_gp.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,391 copying build/lib/pygp/gp/gprEP.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,392 copying build/lib/pygp/gp/gpcEP.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,392 copying build/lib/pygp/gp/composite.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,393 copying build/lib/pygp/gp/kronecker_gplvm.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,393 copying build/lib/pygp/gp/warped_gp.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,393 copying build/lib/pygp/gp/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,394 copying build/lib/pygp/gp/gplvm.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,394 copying build/lib/pygp/gp/gp_base.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,395 copying build/lib/pygp/gp/bayesian_gplvm.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,395 copying build/lib/pygp/gp/shared_latent_bayesian_gplvm.py -> build/bdist.linux-armv7l/wheel/./pygp/gp 2025-09-07T22:26:43,396 creating build/bdist.linux-armv7l/wheel/pygp/covar 2025-09-07T22:26:43,396 copying build/lib/pygp/covar/linear.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,396 copying build/lib/pygp/covar/covar_base.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,397 copying build/lib/pygp/covar/delta.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,397 copying build/lib/pygp/covar/noise.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,397 copying build/lib/pygp/covar/se.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,398 copying build/lib/pygp/covar/gradcheck.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,398 copying build/lib/pygp/covar/combinators.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,399 copying build/lib/pygp/covar/breakpoint.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,399 copying build/lib/pygp/covar/dist.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,400 copying build/lib/pygp/covar/bias.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,400 copying build/lib/pygp/covar/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,400 copying build/lib/pygp/covar/fixed.py -> build/bdist.linux-armv7l/wheel/./pygp/covar 2025-09-07T22:26:43,401 copying build/lib/pygp/__init__.py -> build/bdist.linux-armv7l/wheel/./pygp 2025-09-07T22:26:43,401 running install_data 2025-09-07T22:26:43,473 creating build/bdist.linux-armv7l/wheel/pygp-1.1.3.data/data 2025-09-07T22:26:43,474 copying README.txt -> build/bdist.linux-armv7l/wheel/pygp-1.1.3.data/data/. 2025-09-07T22:26:43,474 error: can't copy 'LICENSE.txt': doesn't exist or not a regular file 2025-09-07T22:26:43,588 ERROR: python setup.py bdist_wheel exited with 1 2025-09-07T22:26:43,601 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-07T22:26:43,601 exec(compile('"'"''"'"''"'"' 2025-09-07T22:26:43,601 # This is -- a caller that pip uses to run setup.py 2025-09-07T22:26:43,601 # 2025-09-07T22:26:43,601 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-07T22:26:43,601 # import from `distutils.core` to work with newer packaging standards. 2025-09-07T22:26:43,601 # - It provides a clear error message when setuptools is not installed. 2025-09-07T22:26:43,601 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-07T22:26:43,601 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-07T22:26:43,601 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-07T22:26:43,601 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-07T22:26:43,601 import os, sys, tokenize, traceback 2025-09-07T22:26:43,601 2025-09-07T22:26:43,601 try: 2025-09-07T22:26:43,601 import setuptools 2025-09-07T22:26:43,601 except ImportError: 2025-09-07T22:26:43,601 print( 2025-09-07T22:26:43,601 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-07T22:26:43,601 "the build environment with exception:", 2025-09-07T22:26:43,601 file=sys.stderr, 2025-09-07T22:26:43,601 ) 2025-09-07T22:26:43,601 traceback.print_exc() 2025-09-07T22:26:43,601 sys.exit(1) 2025-09-07T22:26:43,601 2025-09-07T22:26:43,601 __file__ = %r 2025-09-07T22:26:43,601 sys.argv[0] = __file__ 2025-09-07T22:26:43,601 2025-09-07T22:26:43,601 if os.path.exists(__file__): 2025-09-07T22:26:43,601 filename = __file__ 2025-09-07T22:26:43,601 with tokenize.open(__file__) as f: 2025-09-07T22:26:43,601 setup_py_code = f.read() 2025-09-07T22:26:43,601 else: 2025-09-07T22:26:43,601 filename = "" 2025-09-07T22:26:43,601 setup_py_code = "from setuptools import setup; setup()" 2025-09-07T22:26:43,601 2025-09-07T22:26:43,601 exec(compile(setup_py_code, filename, "exec")) 2025-09-07T22:26:43,601 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-dfjm7evk/pygp_b1977eb94da44a2f82ec097d79de1439/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-v37cqymd[/] 2025-09-07T22:26:43,601 [bold magenta]cwd[/]: /tmp/pip-wheel-dfjm7evk/pygp_b1977eb94da44a2f82ec097d79de1439/ 2025-09-07T22:26:43,601 Building wheel for pygp (setup.py): finished with status 'error' 2025-09-07T22:26:43,602 ERROR: Failed building wheel for pygp 2025-09-07T22:26:43,603 Running setup.py clean for pygp 2025-09-07T22:26:43,604 Running command python setup.py clean 2025-09-07T22:26:44,672 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '1.1.03' to '1.1.3' 2025-09-07T22:26:44,672 self.metadata.version = self._normalize_version(self.metadata.version) 2025-09-07T22:26:44,749 running clean 2025-09-07T22:26:44,893 removing 'build/lib' (and everything under it) 2025-09-07T22:26:44,896 removing 'build/bdist.linux-armv7l' (and everything under it) 2025-09-07T22:26:44,898 'build/scripts-3.13' does not exist -- can't clean it 2025-09-07T22:26:44,898 removing 'build' 2025-09-07T22:26:45,010 Failed to build pygp 2025-09-07T22:26:45,010 ERROR: Failed to build one or more wheels 2025-09-07T22:26:45,011 Exception information: 2025-09-07T22:26:45,011 Traceback (most recent call last): 2025-09-07T22:26:45,011 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-07T22:26:45,011 status = _inner_run() 2025-09-07T22:26:45,011 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-07T22:26:45,011 return self.run(options, args) 2025-09-07T22:26:45,011 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-07T22:26:45,011 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-07T22:26:45,011 return func(self, options, args) 2025-09-07T22:26:45,011 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-07T22:26:45,011 raise CommandError("Failed to build one or more wheels") 2025-09-07T22:26:45,011 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-07T22:26:45,015 Removed build tracker: '/tmp/pip-build-tracker-86afh1l1'