2025-09-08T00:50:31,407 Created temporary directory: /tmp/pip-build-tracker-kb_76kbx 2025-09-08T00:50:31,408 Initialized build tracking at /tmp/pip-build-tracker-kb_76kbx 2025-09-08T00:50:31,408 Created build tracker: /tmp/pip-build-tracker-kb_76kbx 2025-09-08T00:50:31,408 Entered build tracker: /tmp/pip-build-tracker-kb_76kbx 2025-09-08T00:50:31,408 Created temporary directory: /tmp/pip-wheel-8xrtwbvd 2025-09-08T00:50:31,412 Created temporary directory: /tmp/pip-ephem-wheel-cache-vcw579dt 2025-09-08T00:50:31,469 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T00:50:31,471 2 location(s) to search for versions of rnacounter: 2025-09-08T00:50:31,471 * https://pypi.org/simple/rnacounter/ 2025-09-08T00:50:31,471 * https://www.piwheels.org/simple/rnacounter/ 2025-09-08T00:50:31,471 Fetching project page and analyzing links: https://pypi.org/simple/rnacounter/ 2025-09-08T00:50:31,472 Getting page https://pypi.org/simple/rnacounter/ 2025-09-08T00:50:31,473 Found index url https://pypi.org/simple/ 2025-09-08T00:50:31,541 Fetched page https://pypi.org/simple/rnacounter/ as application/vnd.pypi.simple.v1+json 2025-09-08T00:50:31,543 Found link https://files.pythonhosted.org/packages/8f/49/762bb78c6a1215e30ccd9702444375015a50b14847266db0c2f11219e78f/rnacounter-1.1.2.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.1.2 2025-09-08T00:50:31,543 Found link https://files.pythonhosted.org/packages/04/c4/e2924af98cbf63c98cc5a9d210c3c54d959cf961fba4df5da3972afc84ae/rnacounter-1.1.3.1.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.1.3.1 2025-09-08T00:50:31,544 Found link https://files.pythonhosted.org/packages/39/70/41efc4ca6703ffdbdbab1dcd66976ed9a30c363b6f5ba417501e2dd9fb00/rnacounter-1.1.3.2.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.1.3.2 2025-09-08T00:50:31,544 Found link https://files.pythonhosted.org/packages/b1/1c/9f8deaa78b994019b9024043168567099fe010c79018373e2f6ed60ea646/rnacounter-1.1.3.7.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.1.3.7 2025-09-08T00:50:31,544 Found link https://files.pythonhosted.org/packages/14/a1/be9b12f40d130b182ed0d5d01b36f76e6089805a5c945d77941f5eb0928e/rnacounter-1.1.3.10.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.1.3.10 2025-09-08T00:50:31,544 Found link https://files.pythonhosted.org/packages/8a/5e/1b112fc6343bf52ace3a9afaa30eabaf4338afadabf1fb97454a7556b835/rnacounter-1.2.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.2 2025-09-08T00:50:31,544 Found link https://files.pythonhosted.org/packages/05/7d/42ecc29d98f52b77953a55da4836d36d534b317b4d66af971c9008804b61/rnacounter-1.2.1.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.2.1 2025-09-08T00:50:31,545 Found link https://files.pythonhosted.org/packages/dd/92/d53ee16c942fb78a312c03b22b0ddc08eb00ae4627f9125415a2c650b674/rnacounter-1.3.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.3 2025-09-08T00:50:31,545 Found link https://files.pythonhosted.org/packages/49/18/a50e0e2b164272f6d13f458b43d6851766cf121b5672de12078df2bb953a/rnacounter-1.3.1.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.3.1 2025-09-08T00:50:31,545 Found link https://files.pythonhosted.org/packages/ab/bf/54a012d6660528530b8404401bf494bda91947e38aae0d45ba4d721de6d4/rnacounter-1.4.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.4 2025-09-08T00:50:31,545 Found link https://files.pythonhosted.org/packages/84/c0/8f274da33c177f6a7c6d8632d9e99413c83e6ec688825677acace41cfdb1/rnacounter-1.4.1.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.4.1 2025-09-08T00:50:31,545 Found link https://files.pythonhosted.org/packages/45/3a/3cc530b864e9fbd87542c73df418d091aeaeb7b73863fb206e62494d988e/rnacounter-1.4.2.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.4.2 2025-09-08T00:50:31,546 Found link https://files.pythonhosted.org/packages/46/ee/29eed438b10276db92163dff3d25bcb91f3f9e99d9a629c35ddb97f27f4d/rnacounter-1.5.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.5 2025-09-08T00:50:31,546 Found link https://files.pythonhosted.org/packages/a2/ea/657e7b7aa7d777173695606509933b52d794b7dbb79501a87bfea2fb511f/rnacounter-1.5.2.tar.gz (from https://pypi.org/simple/rnacounter/), version: 1.5.2 2025-09-08T00:50:31,546 Fetching project page and analyzing links: https://www.piwheels.org/simple/rnacounter/ 2025-09-08T00:50:31,546 Getting page https://www.piwheels.org/simple/rnacounter/ 2025-09-08T00:50:31,547 Found index url https://www.piwheels.org/simple/ 2025-09-08T00:50:31,639 Fetched page https://www.piwheels.org/simple/rnacounter/ as text/html 2025-09-08T00:50:31,649 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.5.2-cp35-cp35m-linux_armv7l.whl#sha256=1720939a09d8fbca466729cc4db98be3526fe7a3283ce22ef5c5a21d204a6161 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,649 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.5.2-cp35-cp35m-linux_armv6l.whl#sha256=1720939a09d8fbca466729cc4db98be3526fe7a3283ce22ef5c5a21d204a6161 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,649 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.5.2-cp34-cp34m-linux_armv7l.whl#sha256=e384cbf3852a44dffbf3a6887901acb36b9b30bd5c7e1a3585b2fe39d868d67a (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,650 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.5.2-cp34-cp34m-linux_armv6l.whl#sha256=e384cbf3852a44dffbf3a6887901acb36b9b30bd5c7e1a3585b2fe39d868d67a (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,650 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.5-cp35-cp35m-linux_armv7l.whl#sha256=02c416ec8854b92c815224212889f47dbd376e9797f66a0fb19531508b6bc793 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,650 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.5-cp35-cp35m-linux_armv6l.whl#sha256=02c416ec8854b92c815224212889f47dbd376e9797f66a0fb19531508b6bc793 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,650 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.5-cp34-cp34m-linux_armv7l.whl#sha256=ee88d3438f69ffa3b1868868fce8191565f303aee8dd3ff0f34c3a62886a495c (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,650 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.5-cp34-cp34m-linux_armv6l.whl#sha256=ee88d3438f69ffa3b1868868fce8191565f303aee8dd3ff0f34c3a62886a495c (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,650 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4.2-cp34-cp34m-linux_armv7l.whl#sha256=078f497ded7b5492884f2136fa32e9948422bd185ba0345389b2b0d9fa7ab06e (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,650 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4.2-cp34-cp34m-linux_armv6l.whl#sha256=078f497ded7b5492884f2136fa32e9948422bd185ba0345389b2b0d9fa7ab06e (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,651 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4.2-cp35-cp35m-linux_armv6l.whl#sha256=8dffc574db1608136d619621a8809fb0e4d5d3f830e30f94cc2567f4b0a72c55 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,651 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4.2-cp35-cp35m-linux_armv7l.whl#sha256=8dffc574db1608136d619621a8809fb0e4d5d3f830e30f94cc2567f4b0a72c55 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,651 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4.1-cp35-cp35m-linux_armv7l.whl#sha256=35acff814eef7a87f368a8ed7c27f0be20add0cd4a9b4aa8ca756d84f216f218 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,651 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4.1-cp35-cp35m-linux_armv6l.whl#sha256=35acff814eef7a87f368a8ed7c27f0be20add0cd4a9b4aa8ca756d84f216f218 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,651 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4.1-cp34-cp34m-linux_armv7l.whl#sha256=627ec3e6dccdbc30b6697dd277204e300f58ecc971782b1231b09d84a4c1ef94 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,651 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4.1-cp34-cp34m-linux_armv6l.whl#sha256=627ec3e6dccdbc30b6697dd277204e300f58ecc971782b1231b09d84a4c1ef94 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,651 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4-cp34-cp34m-linux_armv7l.whl#sha256=9213623d552d14ff1971589aae10e5f886bcfb42045418cc5871a76607eb25b7 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,652 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4-cp34-cp34m-linux_armv6l.whl#sha256=9213623d552d14ff1971589aae10e5f886bcfb42045418cc5871a76607eb25b7 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,652 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4-cp35-cp35m-linux_armv6l.whl#sha256=14bd0bb3f4379d3d334abacfbbbf7ed43ad60736fa69f394c1eda0385dac9193 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,652 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.4-cp35-cp35m-linux_armv7l.whl#sha256=14bd0bb3f4379d3d334abacfbbbf7ed43ad60736fa69f394c1eda0385dac9193 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,652 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.3.1-cp35-cp35m-linux_armv6l.whl#sha256=a5e2657cda5fa5a9283a186329fadd8db71987a54d71f713970a85b732030278 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,652 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.3.1-cp35-cp35m-linux_armv7l.whl#sha256=a5e2657cda5fa5a9283a186329fadd8db71987a54d71f713970a85b732030278 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,652 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.3-cp35-cp35m-linux_armv6l.whl#sha256=b0a053ced5ce83115199785a117fc7820b20daffef5c19acafc83d0425aca0e1 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,652 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.3-cp35-cp35m-linux_armv7l.whl#sha256=b0a053ced5ce83115199785a117fc7820b20daffef5c19acafc83d0425aca0e1 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,652 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.3-cp34-cp34m-linux_armv7l.whl#sha256=7d3a7695b9d615f45d66d1d00f595ec7b65bbc53dc4ef98292fe909a75adf063 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,653 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.3-cp34-cp34m-linux_armv6l.whl#sha256=7d3a7695b9d615f45d66d1d00f595ec7b65bbc53dc4ef98292fe909a75adf063 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,653 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.2.1-cp35-cp35m-linux_armv7l.whl#sha256=b963649459fb2ab742b717d9b68c590d8ce6333d770e20648104b1e30b3ea97c (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,653 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.2.1-cp35-cp35m-linux_armv6l.whl#sha256=b963649459fb2ab742b717d9b68c590d8ce6333d770e20648104b1e30b3ea97c (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,653 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.2.1-cp34-cp34m-linux_armv7l.whl#sha256=2179418dc1805676ef1838a927c0bbcc2a131b63bd87636aecec3fa865b161d9 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,653 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.2.1-cp34-cp34m-linux_armv6l.whl#sha256=2179418dc1805676ef1838a927c0bbcc2a131b63bd87636aecec3fa865b161d9 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,653 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.2-cp34-cp34m-linux_armv7l.whl#sha256=8ed62342f5d7481f7393010ff34b0286db7f26ea914710a1f81e583b478bb68a (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,653 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.2-cp34-cp34m-linux_armv6l.whl#sha256=8ed62342f5d7481f7393010ff34b0286db7f26ea914710a1f81e583b478bb68a (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,654 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.2-cp35-cp35m-linux_armv7l.whl#sha256=6271c54eb4c54d72f9499294fc50f1644dbd248414d993f053106a876d2e9400 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,654 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.2-cp35-cp35m-linux_armv6l.whl#sha256=6271c54eb4c54d72f9499294fc50f1644dbd248414d993f053106a876d2e9400 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,654 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.10-cp34-cp34m-linux_armv7l.whl#sha256=c27c6c537f58aaa7ad6d853e9791f08485abe8fd219501a30647ef13d19a633a (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,654 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.10-cp34-cp34m-linux_armv6l.whl#sha256=c27c6c537f58aaa7ad6d853e9791f08485abe8fd219501a30647ef13d19a633a (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,654 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.10-cp35-cp35m-linux_armv6l.whl#sha256=12ff9adc93b2ababa50115ab33ec86eb3cbdca4c34609e86298499fc2909e1b2 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,654 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.10-cp35-cp35m-linux_armv7l.whl#sha256=12ff9adc93b2ababa50115ab33ec86eb3cbdca4c34609e86298499fc2909e1b2 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,654 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.7-cp35-cp35m-linux_armv7l.whl#sha256=8863095125d87f061f7651061bc503fbb2c1c613417b578294b555b7bcbdeeba (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,654 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.7-cp35-cp35m-linux_armv6l.whl#sha256=8863095125d87f061f7651061bc503fbb2c1c613417b578294b555b7bcbdeeba (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,655 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.7-cp34-cp34m-linux_armv7l.whl#sha256=368b4bcbb3bbab49c3600537626272135f936e694d4d17911afd7d83cdb31ee6 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,655 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.7-cp34-cp34m-linux_armv6l.whl#sha256=368b4bcbb3bbab49c3600537626272135f936e694d4d17911afd7d83cdb31ee6 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,655 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.2-cp34-cp34m-linux_armv7l.whl#sha256=fb039ca19afdc360ee5843812cf53fbca3ac952fe26a759e4c3700f3b460fc48 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,655 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.2-cp34-cp34m-linux_armv6l.whl#sha256=fb039ca19afdc360ee5843812cf53fbca3ac952fe26a759e4c3700f3b460fc48 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,655 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.2-cp35-cp35m-linux_armv7l.whl#sha256=51ed8c80ea67e82dc8bdaf5636d930011f8ce97bd9cc30432eedabb4dc8c9c95 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,655 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.2-cp35-cp35m-linux_armv6l.whl#sha256=51ed8c80ea67e82dc8bdaf5636d930011f8ce97bd9cc30432eedabb4dc8c9c95 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,655 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.1-cp35-cp35m-linux_armv7l.whl#sha256=534e0f91ccc8a7b74d0e8966764195b4b7e008408e132f2714d3790552ffae89 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,656 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.1-cp35-cp35m-linux_armv6l.whl#sha256=534e0f91ccc8a7b74d0e8966764195b4b7e008408e132f2714d3790552ffae89 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,656 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.1-cp34-cp34m-linux_armv7l.whl#sha256=699103109ceb69845e93941543cff532f3d26934d4a5ceb71af07f8f0c972407 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,656 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.3.1-cp34-cp34m-linux_armv6l.whl#sha256=699103109ceb69845e93941543cff532f3d26934d4a5ceb71af07f8f0c972407 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,656 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.2-cp34-cp34m-linux_armv7l.whl#sha256=e9936c67b8b3ee724e15ef197fef27eb2f5516ba9e9681ca399c5914b4fa01d9 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,656 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.2-cp34-cp34m-linux_armv6l.whl#sha256=e9936c67b8b3ee724e15ef197fef27eb2f5516ba9e9681ca399c5914b4fa01d9 (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,656 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.2-cp35-cp35m-linux_armv6l.whl#sha256=edb76e1344212be1373b20323904b92e0429f1b336a75b9b74a852152217fbab (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,656 Skipping link: No binaries permitted for rnacounter: https://archive1.piwheels.org/simple/rnacounter/rnacounter-1.1.2-cp35-cp35m-linux_armv7l.whl#sha256=edb76e1344212be1373b20323904b92e0429f1b336a75b9b74a852152217fbab (from https://www.piwheels.org/simple/rnacounter/) 2025-09-08T00:50:31,657 Skipping link: not a file: https://www.piwheels.org/simple/rnacounter/ 2025-09-08T00:50:31,657 Skipping link: not a file: https://pypi.org/simple/rnacounter/ 2025-09-08T00:50:31,680 Given no hashes to check 1 links for project 'rnacounter': discarding no candidates 2025-09-08T00:50:31,681 Collecting rnacounter==1.3 2025-09-08T00:50:31,682 Created temporary directory: /tmp/pip-unpack-bop52yl4 2025-09-08T00:50:32,036 Downloading rnacounter-1.3.tar.gz (186 kB) 2025-09-08T00:50:32,114 Added rnacounter==1.3 from https://files.pythonhosted.org/packages/dd/92/d53ee16c942fb78a312c03b22b0ddc08eb00ae4627f9125415a2c650b674/rnacounter-1.3.tar.gz to build tracker '/tmp/pip-build-tracker-kb_76kbx' 2025-09-08T00:50:32,115 Running setup.py (path:/tmp/pip-wheel-8xrtwbvd/rnacounter_5f5ab06c6eee428d95638a92da4df2b0/setup.py) egg_info for package rnacounter 2025-09-08T00:50:32,115 Created temporary directory: /tmp/pip-pip-egg-info-vckogr1b 2025-09-08T00:50:32,116 Preparing metadata (setup.py): started 2025-09-08T00:50:32,116 Running command python setup.py egg_info 2025-09-08T00:50:33,083 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T00:50:33,083 warnings.warn(msg) 2025-09-08T00:50:33,557 running egg_info 2025-09-08T00:50:33,631 creating /tmp/pip-pip-egg-info-vckogr1b/rnacounter.egg-info 2025-09-08T00:50:33,631 writing /tmp/pip-pip-egg-info-vckogr1b/rnacounter.egg-info/PKG-INFO 2025-09-08T00:50:33,633 writing dependency_links to /tmp/pip-pip-egg-info-vckogr1b/rnacounter.egg-info/dependency_links.txt 2025-09-08T00:50:33,633 writing requirements to /tmp/pip-pip-egg-info-vckogr1b/rnacounter.egg-info/requires.txt 2025-09-08T00:50:33,634 writing top-level names to /tmp/pip-pip-egg-info-vckogr1b/rnacounter.egg-info/top_level.txt 2025-09-08T00:50:33,634 writing manifest file '/tmp/pip-pip-egg-info-vckogr1b/rnacounter.egg-info/SOURCES.txt' 2025-09-08T00:50:34,005 reading manifest file '/tmp/pip-pip-egg-info-vckogr1b/rnacounter.egg-info/SOURCES.txt' 2025-09-08T00:50:34,006 reading manifest template 'MANIFEST.in' 2025-09-08T00:50:34,007 warning: no files found matching 'rnacounter/testfiles/*' 2025-09-08T00:50:34,010 writing manifest file '/tmp/pip-pip-egg-info-vckogr1b/rnacounter.egg-info/SOURCES.txt' 2025-09-08T00:50:34,147 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T00:50:34,152 Source in /tmp/pip-wheel-8xrtwbvd/rnacounter_5f5ab06c6eee428d95638a92da4df2b0 has version 1.3, which satisfies requirement rnacounter==1.3 from https://files.pythonhosted.org/packages/dd/92/d53ee16c942fb78a312c03b22b0ddc08eb00ae4627f9125415a2c650b674/rnacounter-1.3.tar.gz 2025-09-08T00:50:34,152 Removed rnacounter==1.3 from https://files.pythonhosted.org/packages/dd/92/d53ee16c942fb78a312c03b22b0ddc08eb00ae4627f9125415a2c650b674/rnacounter-1.3.tar.gz from build tracker '/tmp/pip-build-tracker-kb_76kbx' 2025-09-08T00:50:34,156 Created temporary directory: /tmp/pip-unpack-38je2bhx 2025-09-08T00:50:34,157 Created temporary directory: /tmp/pip-unpack-cij7pomk 2025-09-08T00:50:34,157 Building wheels for collected packages: rnacounter 2025-09-08T00:50:34,158 Created temporary directory: /tmp/pip-wheel-pmv1cibe 2025-09-08T00:50:34,158 DEPRECATION: Building 'rnacounter' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'rnacounter'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T00:50:34,160 Building wheel for rnacounter (setup.py): started 2025-09-08T00:50:34,161 Destination directory: /tmp/pip-wheel-pmv1cibe 2025-09-08T00:50:34,161 Running command python setup.py bdist_wheel 2025-09-08T00:50:35,059 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T00:50:35,060 warnings.warn(msg) 2025-09-08T00:50:35,453 running bdist_wheel 2025-09-08T00:50:35,822 running build 2025-09-08T00:50:35,822 running build_py 2025-09-08T00:50:35,900 creating build/lib.linux-armv7l-cpython-313/rnacounter 2025-09-08T00:50:35,901 copying rnacounter/setup.py -> build/lib.linux-armv7l-cpython-313/rnacounter 2025-09-08T00:50:35,901 copying rnacounter/main.py -> build/lib.linux-armv7l-cpython-313/rnacounter 2025-09-08T00:50:35,902 copying rnacounter/draft_nocython.py -> build/lib.linux-armv7l-cpython-313/rnacounter 2025-09-08T00:50:35,902 copying rnacounter/__init__.py -> build/lib.linux-armv7l-cpython-313/rnacounter 2025-09-08T00:50:35,903 running egg_info 2025-09-08T00:50:35,976 writing rnacounter.egg-info/PKG-INFO 2025-09-08T00:50:35,977 writing dependency_links to rnacounter.egg-info/dependency_links.txt 2025-09-08T00:50:35,978 writing requirements to rnacounter.egg-info/requires.txt 2025-09-08T00:50:35,978 writing top-level names to rnacounter.egg-info/top_level.txt 2025-09-08T00:50:36,055 reading manifest file 'rnacounter.egg-info/SOURCES.txt' 2025-09-08T00:50:36,056 reading manifest template 'MANIFEST.in' 2025-09-08T00:50:36,057 warning: no files found matching 'rnacounter/testfiles/*' 2025-09-08T00:50:36,061 writing manifest file 'rnacounter.egg-info/SOURCES.txt' 2025-09-08T00:50:36,062 copying rnacounter/rnacounter.c -> build/lib.linux-armv7l-cpython-313/rnacounter 2025-09-08T00:50:36,069 running build_ext 2025-09-08T00:50:36,401 building 'rnacounter/rnacounter' extension 2025-09-08T00:50:36,402 creating build/temp.linux-armv7l-cpython-313/rnacounter 2025-09-08T00:50:36,402 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c rnacounter/rnacounter.c -o build/temp.linux-armv7l-cpython-313/rnacounter/rnacounter.o 2025-09-08T00:50:36,841 rnacounter/rnacounter.c: In function ‘__Pyx_ListComp_Append’: 2025-09-08T00:50:36,842 rnacounter/rnacounter.c:1341:23: error: lvalue required as left operand of assignment 2025-09-08T00:50:36,842 1341 | Py_SIZE(list) = len+1; 2025-09-08T00:50:36,842 | ^ 2025-09-08T00:50:36,843 rnacounter/rnacounter.c: In function ‘__Pyx_PyList_Append’: 2025-09-08T00:50:36,844 rnacounter/rnacounter.c:1406:23: error: lvalue required as left operand of assignment 2025-09-08T00:50:36,844 1406 | Py_SIZE(list) = len+1; 2025-09-08T00:50:36,844 | ^ 2025-09-08T00:50:36,853 rnacounter/rnacounter.c: In function ‘__Pyx_PyList_Extend’: 2025-09-08T00:50:36,853 rnacounter/rnacounter.c:1463:22: error: implicit declaration of function ‘_PyList_Extend’; did you mean ‘PyList_Extend’? [-Wimplicit-function-declaration] 2025-09-08T00:50:36,854 1463 | PyObject* none = _PyList_Extend((PyListObject*)L, v); 2025-09-08T00:50:36,854 | ^~~~~~~~~~~~~~ 2025-09-08T00:50:36,854 | PyList_Extend 2025-09-08T00:50:36,854 rnacounter/rnacounter.c:1463:22: error: initialization of ‘PyObject *’ {aka ‘struct _object *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:36,914 rnacounter/rnacounter.c: In function ‘__pyx_pf_10rnacounter_10rnacounter_2parse_bed’: 2025-09-08T00:50:36,918 rnacounter/rnacounter.c:4163:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:36,918 4163 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T00:50:36,918 | ^~ 2025-09-08T00:50:36,918 In file included from /usr/include/python3.13/Python.h:76, 2025-09-08T00:50:36,919 from rnacounter/rnacounter.c:16: 2025-09-08T00:50:36,919 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T00:50:36,919 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T00:50:36,919 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:36,965 rnacounter/rnacounter.c: In function ‘__pyx_pf_10rnacounter_10rnacounter_4join’: 2025-09-08T00:50:36,970 rnacounter/rnacounter.c:5398:9: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:36,971 5398 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T00:50:36,971 | ^~ 2025-09-08T00:50:36,971 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T00:50:36,971 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T00:50:36,971 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:37,001 rnacounter/rnacounter.c: In function ‘__pyx_pf_10rnacounter_10rnacounter_13GenomicObject_2__and__’: 2025-09-08T00:50:37,008 rnacounter/rnacounter.c:6335:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:37,008 6335 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T00:50:37,008 | ^~ 2025-09-08T00:50:37,008 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T00:50:37,009 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T00:50:37,009 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:37,931 rnacounter/rnacounter.c: In function ‘__pyx_pf_10rnacounter_10rnacounter_16parse_args’: 2025-09-08T00:50:37,956 rnacounter/rnacounter.c:22301:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:37,956 22301 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T00:50:37,957 | ^~ 2025-09-08T00:50:37,957 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T00:50:37,957 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T00:50:37,957 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:37,984 rnacounter/rnacounter.c:22355:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:37,984 22355 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T00:50:37,984 | ^~ 2025-09-08T00:50:37,985 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T00:50:37,985 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T00:50:37,985 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:38,013 rnacounter/rnacounter.c:22450:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:38,013 22450 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T00:50:38,014 | ^~ 2025-09-08T00:50:38,014 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T00:50:38,014 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T00:50:38,014 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:38,041 rnacounter/rnacounter.c:22499:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:38,041 22499 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T00:50:38,041 | ^~ 2025-09-08T00:50:38,041 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T00:50:38,042 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T00:50:38,042 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:38,084 rnacounter/rnacounter.c:22635:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:38,084 22635 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T00:50:38,084 | ^~ 2025-09-08T00:50:38,084 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T00:50:38,084 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T00:50:38,084 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:38,196 rnacounter/rnacounter.c: In function ‘__pyx_pf_5numpy_7ndarray___getbuffer__’: 2025-09-08T00:50:38,235 rnacounter/rnacounter.c:23654:50: error: ‘NPY_C_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_C_CONTIGUOUS’? 2025-09-08T00:50:38,235 23654 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_C_CONTIGUOUS) != 0)) != 0); 2025-09-08T00:50:38,235 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,236 | PyBUF_C_CONTIGUOUS 2025-09-08T00:50:38,239 rnacounter/rnacounter.c:23654:50: note: each undeclared identifier is reported only once for each function it appears in 2025-09-08T00:50:38,299 rnacounter/rnacounter.c:23694:50: error: ‘NPY_F_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_F_CONTIGUOUS’? 2025-09-08T00:50:38,299 23694 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_F_CONTIGUOUS) != 0)) != 0); 2025-09-08T00:50:38,299 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,300 | PyBUF_F_CONTIGUOUS 2025-09-08T00:50:38,307 rnacounter/rnacounter.c: In function ‘__pyx_f_5numpy__util_dtypestring’: 2025-09-08T00:50:38,335 rnacounter/rnacounter.c:24700:29: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T00:50:38,336 24700 | if (unlikely(__pyx_v_descr->names == Py_None)) { 2025-09-08T00:50:38,336 | ^~ 2025-09-08T00:50:38,336 rnacounter/rnacounter.c:405:43: note: in definition of macro ‘unlikely’ 2025-09-08T00:50:38,336 405 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T00:50:38,336 | ^ 2025-09-08T00:50:38,368 rnacounter/rnacounter.c:24704:28: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T00:50:38,369 24704 | __pyx_t_1 = __pyx_v_descr->names; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; 2025-09-08T00:50:38,369 | ^~ 2025-09-08T00:50:38,404 rnacounter/rnacounter.c:24722:47: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T00:50:38,404 24722 | __pyx_t_3 = PyObject_GetItem(__pyx_v_descr->fields, __pyx_v_childname); if (unlikely(__pyx_t_3 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; 2025-09-08T00:50:38,404 | ^~ 2025-09-08T00:50:38,454 rnacounter/rnacounter.c:24903:79: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘elsize’ 2025-09-08T00:50:38,454 24903 | (__pyx_v_offset[__pyx_t_8]) = ((__pyx_v_offset[__pyx_t_8]) + __pyx_v_child->elsize); 2025-09-08T00:50:38,455 | ^~ 2025-09-08T00:50:38,503 rnacounter/rnacounter.c: In function ‘__pyx_tp_dealloc_10rnacounter_10rnacounter_GenomicObject’: 2025-09-08T00:50:38,532 rnacounter/rnacounter.c:25531:45: error: implicit declaration of function ‘_PyGC_FINALIZED’ [-Wimplicit-function-declaration] 2025-09-08T00:50:38,533 25531 | if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { 2025-09-08T00:50:38,533 | ^~~~~~~~~~~~~~~ 2025-09-08T00:50:38,635 rnacounter/rnacounter.c: In function ‘__Pyx_InitCachedConstants’: 2025-09-08T00:50:38,669 rnacounter/rnacounter.c:29253:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:38,669 29253 | __pyx_codeobj__69 = (PyObject*)__Pyx_PyCode_New(2, 0, 9, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__68, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_gtf, 66, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__69)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,669 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,670 In file included from /usr/include/python3.13/Python.h:101: 2025-09-08T00:50:38,670 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:38,670 213 | PyCode_New( 2025-09-08T00:50:38,670 | ^~~~~~~~~~ 2025-09-08T00:50:38,707 rnacounter/rnacounter.c:29253:243: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:38,707 29253 | __pyx_codeobj__69 = (PyObject*)__Pyx_PyCode_New(2, 0, 9, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__68, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_gtf, 66, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__69)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,707 | ^~ 2025-09-08T00:50:38,707 | | 2025-09-08T00:50:38,707 | int 2025-09-08T00:50:38,707 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:38,708 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:38,708 | ^~~~~ 2025-09-08T00:50:38,708 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:38,708 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:38,708 | ~~~~~~~~~~^ 2025-09-08T00:50:38,745 rnacounter/rnacounter.c:29253:247: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:38,745 29253 | __pyx_codeobj__69 = (PyObject*)__Pyx_PyCode_New(2, 0, 9, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__68, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_gtf, 66, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__69)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,745 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,746 | | 2025-09-08T00:50:38,746 | PyObject * {aka struct _object *} 2025-09-08T00:50:38,746 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:38,746 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:38,746 | ^~~~ 2025-09-08T00:50:38,746 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:38,746 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:38,746 | ~~~~^ 2025-09-08T00:50:38,783 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:38,783 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:38,783 | ^~~~~~~~~~ 2025-09-08T00:50:38,784 rnacounter/rnacounter.c:29253:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:38,784 29253 | __pyx_codeobj__69 = (PyObject*)__Pyx_PyCode_New(2, 0, 9, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__68, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_gtf, 66, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__69)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,784 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,784 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:38,784 213 | PyCode_New( 2025-09-08T00:50:38,784 | ^~~~~~~~~~ 2025-09-08T00:50:38,818 rnacounter/rnacounter.c:29265:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:38,818 29265 | __pyx_codeobj__71 = (PyObject*)__Pyx_PyCode_New(2, 0, 11, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__70, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_bed, 86, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__71)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,818 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,818 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:38,818 213 | PyCode_New( 2025-09-08T00:50:38,818 | ^~~~~~~~~~ 2025-09-08T00:50:38,855 rnacounter/rnacounter.c:29265:244: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:38,855 29265 | __pyx_codeobj__71 = (PyObject*)__Pyx_PyCode_New(2, 0, 11, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__70, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_bed, 86, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__71)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,856 | ^~ 2025-09-08T00:50:38,856 | | 2025-09-08T00:50:38,856 | int 2025-09-08T00:50:38,856 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:38,856 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:38,856 | ^~~~~ 2025-09-08T00:50:38,856 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:38,856 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:38,856 | ~~~~~~~~~~^ 2025-09-08T00:50:38,894 rnacounter/rnacounter.c:29265:248: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:38,894 29265 | __pyx_codeobj__71 = (PyObject*)__Pyx_PyCode_New(2, 0, 11, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__70, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_bed, 86, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__71)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,894 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,894 | | 2025-09-08T00:50:38,894 | PyObject * {aka struct _object *} 2025-09-08T00:50:38,894 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:38,894 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:38,894 | ^~~~ 2025-09-08T00:50:38,894 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:38,895 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:38,895 | ~~~~^ 2025-09-08T00:50:38,932 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:38,932 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:38,932 | ^~~~~~~~~~ 2025-09-08T00:50:38,932 rnacounter/rnacounter.c:29265:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:38,932 29265 | __pyx_codeobj__71 = (PyObject*)__Pyx_PyCode_New(2, 0, 11, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__70, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_bed, 86, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__71)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,932 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,932 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:38,932 213 | PyCode_New( 2025-09-08T00:50:38,932 | ^~~~~~~~~~ 2025-09-08T00:50:38,966 rnacounter/rnacounter.c:29277:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:38,966 29277 | __pyx_codeobj__73 = (PyObject*)__Pyx_PyCode_New(1, 0, 18, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__72, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_join, 111, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__73)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 111; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:38,966 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:38,967 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:38,967 213 | PyCode_New( 2025-09-08T00:50:38,967 | ^~~~~~~~~~ 2025-09-08T00:50:39,008 rnacounter/rnacounter.c:29277:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:39,008 29277 | __pyx_codeobj__73 = (PyObject*)__Pyx_PyCode_New(1, 0, 18, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__72, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_join, 111, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__73)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 111; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,008 | ^~~ 2025-09-08T00:50:39,009 | | 2025-09-08T00:50:39,009 | int 2025-09-08T00:50:39,009 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,009 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,009 | ^~~~~ 2025-09-08T00:50:39,009 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:39,009 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,009 | ~~~~~~~~~~^ 2025-09-08T00:50:39,045 rnacounter/rnacounter.c:29277:244: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:39,045 29277 | __pyx_codeobj__73 = (PyObject*)__Pyx_PyCode_New(1, 0, 18, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__72, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_join, 111, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__73)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 111; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,045 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,046 | | 2025-09-08T00:50:39,046 | PyObject * {aka struct _object *} 2025-09-08T00:50:39,046 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,046 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,046 | ^~~~ 2025-09-08T00:50:39,046 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:39,046 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,046 | ~~~~^ 2025-09-08T00:50:39,082 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:39,082 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,082 | ^~~~~~~~~~ 2025-09-08T00:50:39,082 rnacounter/rnacounter.c:29277:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,083 29277 | __pyx_codeobj__73 = (PyObject*)__Pyx_PyCode_New(1, 0, 18, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__72, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_join, 111, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__73)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 111; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,083 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,083 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,083 213 | PyCode_New( 2025-09-08T00:50:39,083 | ^~~~~~~~~~ 2025-09-08T00:50:39,116 rnacounter/rnacounter.c:29289:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:39,116 29289 | __pyx_codeobj__75 = (PyObject*)__Pyx_PyCode_New(4, 0, 55, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__74, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_process_chunk, 584, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__75)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 584; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,116 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,116 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,116 213 | PyCode_New( 2025-09-08T00:50:39,116 | ^~~~~~~~~~ 2025-09-08T00:50:39,153 rnacounter/rnacounter.c:29289:248: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:39,153 29289 | __pyx_codeobj__75 = (PyObject*)__Pyx_PyCode_New(4, 0, 55, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__74, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_process_chunk, 584, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__75)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 584; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,153 | ^~~ 2025-09-08T00:50:39,153 | | 2025-09-08T00:50:39,153 | int 2025-09-08T00:50:39,153 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,153 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,153 | ^~~~~ 2025-09-08T00:50:39,154 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:39,154 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,154 | ~~~~~~~~~~^ 2025-09-08T00:50:39,190 rnacounter/rnacounter.c:29289:253: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:39,190 29289 | __pyx_codeobj__75 = (PyObject*)__Pyx_PyCode_New(4, 0, 55, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__74, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_process_chunk, 584, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__75)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 584; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,190 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,190 | | 2025-09-08T00:50:39,190 | PyObject * {aka struct _object *} 2025-09-08T00:50:39,190 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,190 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,190 | ^~~~ 2025-09-08T00:50:39,191 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:39,191 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,191 | ~~~~^ 2025-09-08T00:50:39,227 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:39,227 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,227 | ^~~~~~~~~~ 2025-09-08T00:50:39,227 rnacounter/rnacounter.c:29289:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,227 29289 | __pyx_codeobj__75 = (PyObject*)__Pyx_PyCode_New(4, 0, 55, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__74, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_process_chunk, 584, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__75)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 584; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,227 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,227 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,227 213 | PyCode_New( 2025-09-08T00:50:39,227 | ^~~~~~~~~~ 2025-09-08T00:50:39,260 rnacounter/rnacounter.c:29301:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:39,260 29301 | __pyx_codeobj__77 = (PyObject*)__Pyx_PyCode_New(7, 0, 14, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__76, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_print_output, 719, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__77)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,260 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,260 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,260 213 | PyCode_New( 2025-09-08T00:50:39,261 | ^~~~~~~~~~ 2025-09-08T00:50:39,297 rnacounter/rnacounter.c:29301:247: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:39,297 29301 | __pyx_codeobj__77 = (PyObject*)__Pyx_PyCode_New(7, 0, 14, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__76, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_print_output, 719, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__77)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,297 | ^~~ 2025-09-08T00:50:39,297 | | 2025-09-08T00:50:39,297 | int 2025-09-08T00:50:39,297 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,298 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,298 | ^~~~~ 2025-09-08T00:50:39,298 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:39,298 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,298 | ~~~~~~~~~~^ 2025-09-08T00:50:39,334 rnacounter/rnacounter.c:29301:252: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:39,334 29301 | __pyx_codeobj__77 = (PyObject*)__Pyx_PyCode_New(7, 0, 14, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__76, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_print_output, 719, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__77)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,334 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,334 | | 2025-09-08T00:50:39,334 | PyObject * {aka struct _object *} 2025-09-08T00:50:39,334 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,335 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,335 | ^~~~ 2025-09-08T00:50:39,335 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:39,335 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,335 | ~~~~^ 2025-09-08T00:50:39,371 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:39,371 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,371 | ^~~~~~~~~~ 2025-09-08T00:50:39,371 rnacounter/rnacounter.c:29301:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,371 29301 | __pyx_codeobj__77 = (PyObject*)__Pyx_PyCode_New(7, 0, 14, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__76, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_print_output, 719, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__77)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,371 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,372 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,372 213 | PyCode_New( 2025-09-08T00:50:39,372 | ^~~~~~~~~~ 2025-09-08T00:50:39,404 rnacounter/rnacounter.c:29313:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:39,405 29313 | __pyx_codeobj__80 = (PyObject*)__Pyx_PyCode_New(3, 0, 20, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__79, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_rnacounter_main, 739, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__80)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 739; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,405 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,405 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,405 213 | PyCode_New( 2025-09-08T00:50:39,405 | ^~~~~~~~~~ 2025-09-08T00:50:39,441 rnacounter/rnacounter.c:29313:250: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:39,442 29313 | __pyx_codeobj__80 = (PyObject*)__Pyx_PyCode_New(3, 0, 20, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__79, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_rnacounter_main, 739, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__80)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 739; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,442 | ^~~ 2025-09-08T00:50:39,442 | | 2025-09-08T00:50:39,442 | int 2025-09-08T00:50:39,442 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,442 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,442 | ^~~~~ 2025-09-08T00:50:39,442 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:39,442 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,442 | ~~~~~~~~~~^ 2025-09-08T00:50:39,478 rnacounter/rnacounter.c:29313:255: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:39,479 29313 | __pyx_codeobj__80 = (PyObject*)__Pyx_PyCode_New(3, 0, 20, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__79, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_rnacounter_main, 739, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__80)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 739; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,479 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,479 | | 2025-09-08T00:50:39,479 | PyObject * {aka struct _object *} 2025-09-08T00:50:39,479 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,479 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,479 | ^~~~ 2025-09-08T00:50:39,479 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:39,479 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,479 | ~~~~^ 2025-09-08T00:50:39,515 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:39,515 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,516 | ^~~~~~~~~~ 2025-09-08T00:50:39,516 rnacounter/rnacounter.c:29313:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,516 29313 | __pyx_codeobj__80 = (PyObject*)__Pyx_PyCode_New(3, 0, 20, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__79, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_rnacounter_main, 739, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__80)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 739; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,516 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,516 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,516 213 | PyCode_New( 2025-09-08T00:50:39,516 | ^~~~~~~~~~ 2025-09-08T00:50:39,549 rnacounter/rnacounter.c:29322:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:39,549 29322 | __pyx_codeobj__81 = (PyObject*)__Pyx_PyCode_New(0, 0, 0, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_usage_string, 824, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__81)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 824; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,549 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,549 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,549 213 | PyCode_New( 2025-09-08T00:50:39,549 | ^~~~~~~~~~ 2025-09-08T00:50:39,586 rnacounter/rnacounter.c:29322:248: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:39,586 29322 | __pyx_codeobj__81 = (PyObject*)__Pyx_PyCode_New(0, 0, 0, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_usage_string, 824, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__81)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 824; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,586 | ^~~ 2025-09-08T00:50:39,586 | | 2025-09-08T00:50:39,586 | int 2025-09-08T00:50:39,586 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,586 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,586 | ^~~~~ 2025-09-08T00:50:39,586 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:39,587 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,587 | ~~~~~~~~~~^ 2025-09-08T00:50:39,623 rnacounter/rnacounter.c:29322:253: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:39,623 29322 | __pyx_codeobj__81 = (PyObject*)__Pyx_PyCode_New(0, 0, 0, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_usage_string, 824, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__81)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 824; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,623 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,623 | | 2025-09-08T00:50:39,623 | PyObject * {aka struct _object *} 2025-09-08T00:50:39,623 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,623 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,623 | ^~~~ 2025-09-08T00:50:39,623 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:39,624 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,624 | ~~~~^ 2025-09-08T00:50:39,660 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:39,660 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,660 | ^~~~~~~~~~ 2025-09-08T00:50:39,660 rnacounter/rnacounter.c:29322:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,660 29322 | __pyx_codeobj__81 = (PyObject*)__Pyx_PyCode_New(0, 0, 0, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_usage_string, 824, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__81)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 824; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,660 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,660 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,661 213 | PyCode_New( 2025-09-08T00:50:39,661 | ^~~~~~~~~~ 2025-09-08T00:50:39,693 rnacounter/rnacounter.c:29334:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:39,694 29334 | __pyx_codeobj__83 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__82, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_errmsg, 827, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__83)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,694 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,694 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,694 213 | PyCode_New( 2025-09-08T00:50:39,694 | ^~~~~~~~~~ 2025-09-08T00:50:39,730 rnacounter/rnacounter.c:29334:240: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:39,731 29334 | __pyx_codeobj__83 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__82, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_errmsg, 827, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__83)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,731 | ^~~ 2025-09-08T00:50:39,731 | | 2025-09-08T00:50:39,731 | int 2025-09-08T00:50:39,731 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,731 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,731 | ^~~~~ 2025-09-08T00:50:39,731 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:39,731 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,731 | ~~~~~~~~~~^ 2025-09-08T00:50:39,767 rnacounter/rnacounter.c:29334:245: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:39,768 29334 | __pyx_codeobj__83 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__82, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_errmsg, 827, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__83)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,768 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,768 | | 2025-09-08T00:50:39,768 | PyObject * {aka struct _object *} 2025-09-08T00:50:39,768 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,768 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,768 | ^~~~ 2025-09-08T00:50:39,768 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:39,768 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,768 | ~~~~^ 2025-09-08T00:50:39,804 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:39,805 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,805 | ^~~~~~~~~~ 2025-09-08T00:50:39,805 rnacounter/rnacounter.c:29334:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,805 29334 | __pyx_codeobj__83 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__82, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_errmsg, 827, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__83)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,805 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,805 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,805 213 | PyCode_New( 2025-09-08T00:50:39,805 | ^~~~~~~~~~ 2025-09-08T00:50:39,838 rnacounter/rnacounter.c:29346:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:39,838 29346 | __pyx_codeobj__85 = (PyObject*)__Pyx_PyCode_New(1, 0, 13, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__84, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_args, 831, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__85)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,838 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,838 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,838 213 | PyCode_New( 2025-09-08T00:50:39,839 | ^~~~~~~~~~ 2025-09-08T00:50:39,875 rnacounter/rnacounter.c:29346:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:39,875 29346 | __pyx_codeobj__85 = (PyObject*)__Pyx_PyCode_New(1, 0, 13, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__84, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_args, 831, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__85)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,875 | ^~~ 2025-09-08T00:50:39,875 | | 2025-09-08T00:50:39,875 | int 2025-09-08T00:50:39,875 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,876 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,876 | ^~~~~ 2025-09-08T00:50:39,876 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:39,876 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,876 | ~~~~~~~~~~^ 2025-09-08T00:50:39,912 rnacounter/rnacounter.c:29346:250: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:39,912 29346 | __pyx_codeobj__85 = (PyObject*)__Pyx_PyCode_New(1, 0, 13, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__84, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_args, 831, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__85)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,912 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,912 | | 2025-09-08T00:50:39,912 | PyObject * {aka struct _object *} 2025-09-08T00:50:39,913 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,913 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,913 | ^~~~ 2025-09-08T00:50:39,913 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:39,913 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:39,913 | ~~~~^ 2025-09-08T00:50:39,949 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:39,949 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:39,949 | ^~~~~~~~~~ 2025-09-08T00:50:39,949 rnacounter/rnacounter.c:29346:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:39,949 29346 | __pyx_codeobj__85 = (PyObject*)__Pyx_PyCode_New(1, 0, 13, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__84, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_Users_delafont_repos_rnacounter, __pyx_n_s_parse_args, 831, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__85)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T00:50:39,950 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:39,950 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:39,950 213 | PyCode_New( 2025-09-08T00:50:39,950 | ^~~~~~~~~~ 2025-09-08T00:50:39,953 rnacounter/rnacounter.c: In function ‘PyInit_rnacounter’: 2025-09-08T00:50:39,986 rnacounter/rnacounter.c:29450:53: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:39,986 29450 | __pyx_type_10rnacounter_10rnacounter_GenomicObject.tp_print = 0; 2025-09-08T00:50:39,986 | ^ 2025-09-08T00:50:40,020 rnacounter/rnacounter.c:29467:44: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,020 29467 | __pyx_type_10rnacounter_10rnacounter_Exon.tp_print = 0; 2025-09-08T00:50:40,020 | ^ 2025-09-08T00:50:40,054 rnacounter/rnacounter.c:29473:50: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,054 29473 | __pyx_type_10rnacounter_10rnacounter_Transcript.tp_print = 0; 2025-09-08T00:50:40,054 | ^ 2025-09-08T00:50:40,087 rnacounter/rnacounter.c:29478:44: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,088 29478 | __pyx_type_10rnacounter_10rnacounter_Gene.tp_print = 0; 2025-09-08T00:50:40,088 | ^ 2025-09-08T00:50:40,121 rnacounter/rnacounter.c:29482:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,121 29482 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct__parse_gtf.tp_print = 0; 2025-09-08T00:50:40,121 | ^ 2025-09-08T00:50:40,154 rnacounter/rnacounter.c:29485:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,155 29485 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_1_genexpr.tp_print = 0; 2025-09-08T00:50:40,155 | ^ 2025-09-08T00:50:40,188 rnacounter/rnacounter.c:29488:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,188 29488 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_2_genexpr.tp_print = 0; 2025-09-08T00:50:40,188 | ^ 2025-09-08T00:50:40,222 rnacounter/rnacounter.c:29491:65: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,222 29491 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_3_join.tp_print = 0; 2025-09-08T00:50:40,222 | ^ 2025-09-08T00:50:40,255 rnacounter/rnacounter.c:29494:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,255 29494 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_4_genexpr.tp_print = 0; 2025-09-08T00:50:40,255 | ^ 2025-09-08T00:50:40,289 rnacounter/rnacounter.c:29497:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,289 29497 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_5_genexpr.tp_print = 0; 2025-09-08T00:50:40,289 | ^ 2025-09-08T00:50:40,322 rnacounter/rnacounter.c:29500:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,323 29500 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_6_genexpr.tp_print = 0; 2025-09-08T00:50:40,323 | ^ 2025-09-08T00:50:40,356 rnacounter/rnacounter.c:29503:74: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,356 29503 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_7_process_chunk.tp_print = 0; 2025-09-08T00:50:40,356 | ^ 2025-09-08T00:50:40,390 rnacounter/rnacounter.c:29506:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,390 29506 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_8_genexpr.tp_print = 0; 2025-09-08T00:50:40,390 | ^ 2025-09-08T00:50:40,423 rnacounter/rnacounter.c:29509:68: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,423 29509 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_9_genexpr.tp_print = 0; 2025-09-08T00:50:40,423 | ^ 2025-09-08T00:50:40,457 rnacounter/rnacounter.c:29512:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,457 29512 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_10_genexpr.tp_print = 0; 2025-09-08T00:50:40,457 | ^ 2025-09-08T00:50:40,490 rnacounter/rnacounter.c:29515:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,491 29515 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_11_genexpr.tp_print = 0; 2025-09-08T00:50:40,491 | ^ 2025-09-08T00:50:40,524 rnacounter/rnacounter.c:29518:74: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,524 29518 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_12_print_output.tp_print = 0; 2025-09-08T00:50:40,524 | ^ 2025-09-08T00:50:40,558 rnacounter/rnacounter.c:29521:72: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,558 29521 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_13_parse_args.tp_print = 0; 2025-09-08T00:50:40,558 | ^ 2025-09-08T00:50:40,591 rnacounter/rnacounter.c:29524:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,591 29524 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_14_genexpr.tp_print = 0; 2025-09-08T00:50:40,592 | ^ 2025-09-08T00:50:40,625 rnacounter/rnacounter.c:29527:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,625 29527 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_15_genexpr.tp_print = 0; 2025-09-08T00:50:40,625 | ^ 2025-09-08T00:50:40,659 rnacounter/rnacounter.c:29530:69: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T00:50:40,659 29530 | __pyx_type_10rnacounter_10rnacounter___pyx_scope_struct_16_genexpr.tp_print = 0; 2025-09-08T00:50:40,659 | ^ 2025-09-08T00:50:40,714 rnacounter/rnacounter.c: In function ‘__Pyx_PyUnicode_Equals’: 2025-09-08T00:50:40,752 rnacounter/rnacounter.c:84:51: error: implicit declaration of function ‘_PyUnicode_Ready’; did you mean ‘PyUnicode_READY’? [-Wimplicit-function-declaration] 2025-09-08T00:50:40,753 84 | 0 : _PyUnicode_Ready((PyObject *)(op))) 2025-09-08T00:50:40,753 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:40,753 rnacounter/rnacounter.c:405:43: note: in definition of macro ‘unlikely’ 2025-09-08T00:50:40,753 405 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T00:50:40,753 | ^ 2025-09-08T00:50:40,753 rnacounter/rnacounter.c:30054:22: note: in expansion of macro ‘__Pyx_PyUnicode_READY’ 2025-09-08T00:50:40,753 30054 | if (unlikely(__Pyx_PyUnicode_READY(s1) < 0) || unlikely(__Pyx_PyUnicode_READY(s2) < 0)) 2025-09-08T00:50:40,753 | ^~~~~~~~~~~~~~~~~~~~~ 2025-09-08T00:50:40,802 rnacounter/rnacounter.c: In function ‘__Pyx_ErrRestore’: 2025-09-08T00:50:40,837 rnacounter/rnacounter.c:30146:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:40,837 30146 | tmp_type = tstate->curexc_type; 2025-09-08T00:50:40,837 | ^~ 2025-09-08T00:50:40,872 rnacounter/rnacounter.c:30147:23: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T00:50:40,872 30147 | tmp_value = tstate->curexc_value; 2025-09-08T00:50:40,872 | ^~ 2025-09-08T00:50:40,906 rnacounter/rnacounter.c:30148:20: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:40,906 30148 | tmp_tb = tstate->curexc_traceback; 2025-09-08T00:50:40,907 | ^~ 2025-09-08T00:50:40,941 rnacounter/rnacounter.c:30149:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:40,941 30149 | tstate->curexc_type = type; 2025-09-08T00:50:40,941 | ^~ 2025-09-08T00:50:40,976 rnacounter/rnacounter.c:30150:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T00:50:40,976 30150 | tstate->curexc_value = value; 2025-09-08T00:50:40,976 | ^~ 2025-09-08T00:50:41,011 rnacounter/rnacounter.c:30151:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:41,011 30151 | tstate->curexc_traceback = tb; 2025-09-08T00:50:41,011 | ^~ 2025-09-08T00:50:41,011 rnacounter/rnacounter.c: In function ‘__Pyx_ErrFetch’: 2025-09-08T00:50:41,046 rnacounter/rnacounter.c:30162:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:41,046 30162 | *type = tstate->curexc_type; 2025-09-08T00:50:41,046 | ^~ 2025-09-08T00:50:41,081 rnacounter/rnacounter.c:30163:20: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T00:50:41,081 30163 | *value = tstate->curexc_value; 2025-09-08T00:50:41,081 | ^~ 2025-09-08T00:50:41,115 rnacounter/rnacounter.c:30164:17: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:41,115 30164 | *tb = tstate->curexc_traceback; 2025-09-08T00:50:41,116 | ^~ 2025-09-08T00:50:41,150 rnacounter/rnacounter.c:30165:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:41,150 30165 | tstate->curexc_type = 0; 2025-09-08T00:50:41,150 | ^~ 2025-09-08T00:50:41,185 rnacounter/rnacounter.c:30166:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T00:50:41,185 30166 | tstate->curexc_value = 0; 2025-09-08T00:50:41,185 | ^~ 2025-09-08T00:50:41,220 rnacounter/rnacounter.c:30167:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:41,220 30167 | tstate->curexc_traceback = 0; 2025-09-08T00:50:41,220 | ^~ 2025-09-08T00:50:41,294 rnacounter/rnacounter.c: In function ‘__Pyx_ExceptionSave’: 2025-09-08T00:50:41,345 rnacounter/rnacounter.c:30364:21: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘exc_state’? 2025-09-08T00:50:41,345 30364 | *type = tstate->exc_type; 2025-09-08T00:50:41,345 | ^~~~~~~~ 2025-09-08T00:50:41,345 | exc_state 2025-09-08T00:50:41,379 rnacounter/rnacounter.c:30365:20: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’ 2025-09-08T00:50:41,379 30365 | *value = tstate->exc_value; 2025-09-08T00:50:41,379 | ^~ 2025-09-08T00:50:41,413 rnacounter/rnacounter.c:30366:17: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’ 2025-09-08T00:50:41,414 30366 | *tb = tstate->exc_traceback; 2025-09-08T00:50:41,414 | ^~ 2025-09-08T00:50:41,414 rnacounter/rnacounter.c: In function ‘__Pyx_ExceptionReset’: 2025-09-08T00:50:41,464 rnacounter/rnacounter.c:30378:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘exc_state’? 2025-09-08T00:50:41,464 30378 | tmp_type = tstate->exc_type; 2025-09-08T00:50:41,464 | ^~~~~~~~ 2025-09-08T00:50:41,464 | exc_state 2025-09-08T00:50:41,498 rnacounter/rnacounter.c:30379:23: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’ 2025-09-08T00:50:41,498 30379 | tmp_value = tstate->exc_value; 2025-09-08T00:50:41,498 | ^~ 2025-09-08T00:50:41,533 rnacounter/rnacounter.c:30380:20: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’ 2025-09-08T00:50:41,533 30380 | tmp_tb = tstate->exc_traceback; 2025-09-08T00:50:41,533 | ^~ 2025-09-08T00:50:41,582 rnacounter/rnacounter.c:30381:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘exc_state’? 2025-09-08T00:50:41,582 30381 | tstate->exc_type = type; 2025-09-08T00:50:41,582 | ^~~~~~~~ 2025-09-08T00:50:41,583 | exc_state 2025-09-08T00:50:41,617 rnacounter/rnacounter.c:30382:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’ 2025-09-08T00:50:41,617 30382 | tstate->exc_value = value; 2025-09-08T00:50:41,617 | ^~ 2025-09-08T00:50:41,651 rnacounter/rnacounter.c:30383:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’ 2025-09-08T00:50:41,651 30383 | tstate->exc_traceback = tb; 2025-09-08T00:50:41,651 | ^~ 2025-09-08T00:50:41,652 rnacounter/rnacounter.c: In function ‘__Pyx_GetException’: 2025-09-08T00:50:41,686 rnacounter/rnacounter.c:30397:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:41,687 30397 | local_type = tstate->curexc_type; 2025-09-08T00:50:41,687 | ^~ 2025-09-08T00:50:41,721 rnacounter/rnacounter.c:30398:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T00:50:41,721 30398 | local_value = tstate->curexc_value; 2025-09-08T00:50:41,721 | ^~ 2025-09-08T00:50:41,755 rnacounter/rnacounter.c:30399:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:41,755 30399 | local_tb = tstate->curexc_traceback; 2025-09-08T00:50:41,756 | ^~ 2025-09-08T00:50:41,790 rnacounter/rnacounter.c:30400:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:41,790 30400 | tstate->curexc_type = 0; 2025-09-08T00:50:41,790 | ^~ 2025-09-08T00:50:41,824 rnacounter/rnacounter.c:30401:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T00:50:41,824 30401 | tstate->curexc_value = 0; 2025-09-08T00:50:41,825 | ^~ 2025-09-08T00:50:41,859 rnacounter/rnacounter.c:30402:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:41,859 30402 | tstate->curexc_traceback = 0; 2025-09-08T00:50:41,859 | ^~ 2025-09-08T00:50:41,893 rnacounter/rnacounter.c:30408:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:41,894 30408 | if (unlikely(tstate->curexc_type)) 2025-09-08T00:50:41,894 | ^~ 2025-09-08T00:50:41,894 rnacounter/rnacounter.c:405:43: note: in definition of macro ‘unlikely’ 2025-09-08T00:50:41,894 405 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T00:50:41,894 | ^ 2025-09-08T00:50:41,956 rnacounter/rnacounter.c:30426:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘exc_state’? 2025-09-08T00:50:41,956 30426 | tmp_type = tstate->exc_type; 2025-09-08T00:50:41,956 | ^~~~~~~~ 2025-09-08T00:50:41,956 | exc_state 2025-09-08T00:50:41,990 rnacounter/rnacounter.c:30427:23: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’ 2025-09-08T00:50:41,990 30427 | tmp_value = tstate->exc_value; 2025-09-08T00:50:41,990 | ^~ 2025-09-08T00:50:42,025 rnacounter/rnacounter.c:30428:20: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’ 2025-09-08T00:50:42,025 30428 | tmp_tb = tstate->exc_traceback; 2025-09-08T00:50:42,025 | ^~ 2025-09-08T00:50:42,074 rnacounter/rnacounter.c:30429:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘exc_state’? 2025-09-08T00:50:42,075 30429 | tstate->exc_type = local_type; 2025-09-08T00:50:42,075 | ^~~~~~~~ 2025-09-08T00:50:42,075 | exc_state 2025-09-08T00:50:42,109 rnacounter/rnacounter.c:30430:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’ 2025-09-08T00:50:42,109 30430 | tstate->exc_value = local_value; 2025-09-08T00:50:42,109 | ^~ 2025-09-08T00:50:42,143 rnacounter/rnacounter.c:30431:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’ 2025-09-08T00:50:42,143 30431 | tstate->exc_traceback = local_tb; 2025-09-08T00:50:42,144 | ^~ 2025-09-08T00:50:42,171 rnacounter/rnacounter.c: In function ‘__Pyx_ParseOptionalKeywords’: 2025-09-08T00:50:42,221 rnacounter/rnacounter.c:30535:22: error: implicit declaration of function ‘PyUnicode_GET_SIZE’; did you mean ‘PyDict_GET_SIZE’? [-Wimplicit-function-declaration] 2025-09-08T00:50:42,221 30535 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2025-09-08T00:50:42,221 | ^~~~~~~~~~~~~~~~~~ 2025-09-08T00:50:42,221 | PyDict_GET_SIZE 2025-09-08T00:50:42,335 rnacounter/rnacounter.c: In function ‘__Pyx_Raise’: 2025-09-08T00:50:42,370 rnacounter/rnacounter.c:30761:34: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:42,370 30761 | PyObject* tmp_tb = tstate->curexc_traceback; 2025-09-08T00:50:42,370 | ^~ 2025-09-08T00:50:42,406 rnacounter/rnacounter.c:30764:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:42,406 30764 | tstate->curexc_traceback = tb; 2025-09-08T00:50:42,406 | ^~ 2025-09-08T00:50:42,463 rnacounter/rnacounter.c: In function ‘__Pyx_PyIter_Next2’: 2025-09-08T00:50:42,498 rnacounter/rnacounter.c:30809:31: error: ‘_PyObject_NextNotImplemented’ undeclared (first use in this function); did you mean ‘PyObject_HashNotImplemented’? 2025-09-08T00:50:42,498 30809 | if (unlikely(iternext == &_PyObject_NextNotImplemented)) 2025-09-08T00:50:42,499 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T00:50:42,499 rnacounter/rnacounter.c:405:43: note: in definition of macro ‘unlikely’ 2025-09-08T00:50:42,499 405 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T00:50:42,499 | ^ 2025-09-08T00:50:42,536 rnacounter/rnacounter.c: In function ‘__Pyx_IterFinish’: 2025-09-08T00:50:42,571 rnacounter/rnacounter.c:30973:32: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:42,572 30973 | PyObject* exc_type = tstate->curexc_type; 2025-09-08T00:50:42,572 | ^~ 2025-09-08T00:50:42,607 rnacounter/rnacounter.c:30977:31: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T00:50:42,607 30977 | exc_value = tstate->curexc_value; 2025-09-08T00:50:42,607 | ^~ 2025-09-08T00:50:42,643 rnacounter/rnacounter.c:30978:28: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:42,643 30978 | exc_tb = tstate->curexc_traceback; 2025-09-08T00:50:42,643 | ^~ 2025-09-08T00:50:42,679 rnacounter/rnacounter.c:30979:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T00:50:42,679 30979 | tstate->curexc_type = 0; 2025-09-08T00:50:42,679 | ^~ 2025-09-08T00:50:42,714 rnacounter/rnacounter.c:30980:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T00:50:42,714 30980 | tstate->curexc_value = 0; 2025-09-08T00:50:42,714 | ^~ 2025-09-08T00:50:42,750 rnacounter/rnacounter.c:30981:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T00:50:42,750 30981 | tstate->curexc_traceback = 0; 2025-09-08T00:50:42,750 | ^~ 2025-09-08T00:50:43,239 rnacounter/rnacounter.c: In function ‘__Pyx_CyFunction_Call’: 2025-09-08T00:50:43,293 rnacounter/rnacounter.c:32325:16: error: implicit declaration of function ‘PyCFunction_Call’; did you mean ‘PyCFunction_New’? [-Wimplicit-function-declaration] 2025-09-08T00:50:43,293 32325 | return PyCFunction_Call(func, arg, kw); 2025-09-08T00:50:43,293 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,293 | PyCFunction_New 2025-09-08T00:50:43,334 rnacounter/rnacounter.c:32325:16: error: returning ‘int’ from a function with return type ‘PyObject *’ {aka ‘struct _object *’} makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:43,334 32325 | return PyCFunction_Call(func, arg, kw); 2025-09-08T00:50:43,335 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,353 rnacounter/rnacounter.c: In function ‘__Pyx_CyFunction_init’: 2025-09-08T00:50:43,405 rnacounter/rnacounter.c:32390:41: error: ‘PyCFunction_Call’ undeclared (first use in this function); did you mean ‘PyCFunction_New’? 2025-09-08T00:50:43,405 32390 | __pyx_CyFunctionType_type.tp_call = PyCFunction_Call; 2025-09-08T00:50:43,405 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,406 | PyCFunction_New 2025-09-08T00:50:43,450 rnacounter/rnacounter.c: In function ‘__Pyx_CreateCodeObjectForTraceback’: 2025-09-08T00:50:43,487 rnacounter/rnacounter.c:32566:5: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T00:50:43,487 32566 | py_code = __Pyx_PyCode_New( 2025-09-08T00:50:43,488 | ^~~~~~~ 2025-09-08T00:50:43,488 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:43,488 213 | PyCode_New( 2025-09-08T00:50:43,488 | ^~~~~~~~~~ 2025-09-08T00:50:43,524 rnacounter/rnacounter.c:32580:9: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T00:50:43,525 32580 | py_line, 2025-09-08T00:50:43,525 | ^~~~~~~ 2025-09-08T00:50:43,525 | | 2025-09-08T00:50:43,525 | int 2025-09-08T00:50:43,525 rnacounter/rnacounter.c:70:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:43,525 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:43,525 | ^~~~~ 2025-09-08T00:50:43,525 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T00:50:43,525 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:43,525 | ~~~~~~~~~~^ 2025-09-08T00:50:43,566 rnacounter/rnacounter.c:32581:9: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:43,566 32581 | __pyx_empty_bytes /*PyObject *lnotab*/ 2025-09-08T00:50:43,566 | ^~~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,566 | | 2025-09-08T00:50:43,566 | PyObject * {aka struct _object *} 2025-09-08T00:50:43,566 rnacounter/rnacounter.c:70:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:43,566 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:43,566 | ^~~~ 2025-09-08T00:50:43,566 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T00:50:43,567 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T00:50:43,567 | ~~~~^ 2025-09-08T00:50:43,607 rnacounter/rnacounter.c:70:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T00:50:43,607 70 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T00:50:43,607 | ^~~~~~~~~~ 2025-09-08T00:50:43,607 rnacounter/rnacounter.c:32566:15: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T00:50:43,607 32566 | py_code = __Pyx_PyCode_New( 2025-09-08T00:50:43,607 | ^~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,607 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T00:50:43,608 213 | PyCode_New( 2025-09-08T00:50:43,608 | ^~~~~~~~~~ 2025-09-08T00:50:43,624 rnacounter/rnacounter.c: In function ‘__Pyx_AddTraceback’: 2025-09-08T00:50:43,661 rnacounter/rnacounter.c:32609:13: error: invalid use of incomplete typedef ‘PyFrameObject’ {aka ‘struct _frame’} 2025-09-08T00:50:43,661 32609 | py_frame->f_lineno = py_line; 2025-09-08T00:50:43,661 | ^~ 2025-09-08T00:50:43,663 rnacounter/rnacounter.c: In function ‘__Pyx_PyInt_As_int’: 2025-09-08T00:50:43,700 rnacounter/rnacounter.c:32730:27: error: too few arguments to function ‘_PyLong_AsByteArray’ 2025-09-08T00:50:43,700 32730 | int ret = _PyLong_AsByteArray((PyLongObject *)v, 2025-09-08T00:50:43,700 | ^~~~~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,700 In file included from /usr/include/python3.13/longobject.h:107, 2025-09-08T00:50:43,700 from /usr/include/python3.13/Python.h:81: 2025-09-08T00:50:43,701 /usr/include/python3.13/cpython/longobject.h:111:17: note: declared here 2025-09-08T00:50:43,701 111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v, 2025-09-08T00:50:43,701 | ^~~~~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,747 rnacounter/rnacounter.c: In function ‘__Pyx_PyInt_As_long’: 2025-09-08T00:50:43,783 rnacounter/rnacounter.c:33185:27: error: too few arguments to function ‘_PyLong_AsByteArray’ 2025-09-08T00:50:43,784 33185 | int ret = _PyLong_AsByteArray((PyLongObject *)v, 2025-09-08T00:50:43,784 | ^~~~~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,784 /usr/include/python3.13/cpython/longobject.h:111:17: note: declared here 2025-09-08T00:50:43,784 111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v, 2025-09-08T00:50:43,784 | ^~~~~~~~~~~~~~~~~~~ 2025-09-08T00:50:43,793 rnacounter/rnacounter.c: In function ‘__Pyx_ExceptionSwap’: 2025-09-08T00:50:43,848 rnacounter/rnacounter.c:33217:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘exc_state’? 2025-09-08T00:50:43,848 33217 | tmp_type = tstate->exc_type; 2025-09-08T00:50:43,848 | ^~~~~~~~ 2025-09-08T00:50:43,848 | exc_state 2025-09-08T00:50:43,886 rnacounter/rnacounter.c:33218:23: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’ 2025-09-08T00:50:43,887 33218 | tmp_value = tstate->exc_value; 2025-09-08T00:50:43,887 | ^~ 2025-09-08T00:50:43,925 rnacounter/rnacounter.c:33219:20: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’ 2025-09-08T00:50:43,925 33219 | tmp_tb = tstate->exc_traceback; 2025-09-08T00:50:43,925 | ^~ 2025-09-08T00:50:43,980 rnacounter/rnacounter.c:33220:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘exc_state’? 2025-09-08T00:50:43,980 33220 | tstate->exc_type = *type; 2025-09-08T00:50:43,980 | ^~~~~~~~ 2025-09-08T00:50:43,980 | exc_state 2025-09-08T00:50:44,018 rnacounter/rnacounter.c:33221:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’ 2025-09-08T00:50:44,018 33221 | tstate->exc_value = *value; 2025-09-08T00:50:44,018 | ^~ 2025-09-08T00:50:44,056 rnacounter/rnacounter.c:33222:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’ 2025-09-08T00:50:44,056 33222 | tstate->exc_traceback = *tb; 2025-09-08T00:50:44,056 | ^~ 2025-09-08T00:50:44,058 In file included from /usr/include/python3.13/Python.h:63: 2025-09-08T00:50:44,059 rnacounter/rnacounter.c: In function ‘__Pyx_Generator_SendEx’: 2025-09-08T00:50:44,138 rnacounter/rnacounter.c:33342:30: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘frame’ 2025-09-08T00:50:44,138 33342 | Py_XINCREF(tstate->frame); 2025-09-08T00:50:44,138 | ^~ 2025-09-08T00:50:44,138 /usr/include/python3.13/pyport.h:19:38: note: in definition of macro ‘_Py_CAST’ 2025-09-08T00:50:44,138 19 | #define _Py_CAST(type, expr) ((type)(expr)) 2025-09-08T00:50:44,138 | ^~~~ 2025-09-08T00:50:44,139 /usr/include/python3.13/object.h:1041:37: note: in expansion of macro ‘_PyObject_CAST’ 2025-09-08T00:50:44,139 1041 | # define Py_XINCREF(op) Py_XINCREF(_PyObject_CAST(op)) 2025-09-08T00:50:44,139 | ^~~~~~~~~~~~~~ 2025-09-08T00:50:44,139 rnacounter/rnacounter.c:33342:13: note: in expansion of macro ‘Py_XINCREF’ 2025-09-08T00:50:44,139 33342 | Py_XINCREF(tstate->frame); 2025-09-08T00:50:44,139 | ^~~~~~~~~~ 2025-09-08T00:50:44,175 rnacounter/rnacounter.c:33344:14: error: invalid use of incomplete typedef ‘PyFrameObject’ {aka ‘struct _frame’} 2025-09-08T00:50:44,175 33344 | f->f_back = tstate->frame; 2025-09-08T00:50:44,175 | ^~ 2025-09-08T00:50:44,216 rnacounter/rnacounter.c:33344:31: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘frame’ 2025-09-08T00:50:44,216 33344 | f->f_back = tstate->frame; 2025-09-08T00:50:44,217 | ^~ 2025-09-08T00:50:44,295 rnacounter/rnacounter.c:33363:23: error: invalid use of incomplete typedef ‘PyFrameObject’ {aka ‘struct _frame’} 2025-09-08T00:50:44,295 33363 | Py_CLEAR(f->f_back); 2025-09-08T00:50:44,295 | ^~ 2025-09-08T00:50:44,295 /usr/include/python3.13/pyport.h:558:39: note: in definition of macro ‘_Py_TYPEOF’ 2025-09-08T00:50:44,295 558 | # define _Py_TYPEOF(expr) __typeof__(expr) 2025-09-08T00:50:44,296 | ^~~~ 2025-09-08T00:50:44,296 rnacounter/rnacounter.c:33363:13: note: in expansion of macro ‘Py_CLEAR’ 2025-09-08T00:50:44,296 33363 | Py_CLEAR(f->f_back); 2025-09-08T00:50:44,296 | ^~~~~~~~ 2025-09-08T00:50:44,336 In file included from /usr/include/python3.13/Python.h:72: 2025-09-08T00:50:44,337 rnacounter/rnacounter.c:33363:23: error: invalid use of incomplete typedef ‘PyFrameObject’ {aka ‘struct _frame’} 2025-09-08T00:50:44,337 33363 | Py_CLEAR(f->f_back); 2025-09-08T00:50:44,337 | ^~ 2025-09-08T00:50:44,337 /usr/include/python3.13/object.h:1012:41: note: in definition of macro ‘Py_CLEAR’ 2025-09-08T00:50:44,337 1012 | _Py_TYPEOF(op)* _tmp_op_ptr = &(op); \ 2025-09-08T00:50:44,337 | ^~ 2025-09-08T00:50:44,419 rnacounter/rnacounter.c:33363:23: error: invalid use of incomplete typedef ‘PyFrameObject’ {aka ‘struct _frame’} 2025-09-08T00:50:44,419 33363 | Py_CLEAR(f->f_back); 2025-09-08T00:50:44,419 | ^~ 2025-09-08T00:50:44,419 /usr/include/python3.13/pyport.h:558:39: note: in definition of macro ‘_Py_TYPEOF’ 2025-09-08T00:50:44,419 558 | # define _Py_TYPEOF(expr) __typeof__(expr) 2025-09-08T00:50:44,419 | ^~~~ 2025-09-08T00:50:44,419 rnacounter/rnacounter.c:33363:13: note: in expansion of macro ‘Py_CLEAR’ 2025-09-08T00:50:44,420 33363 | Py_CLEAR(f->f_back); 2025-09-08T00:50:44,420 | ^~~~~~~~ 2025-09-08T00:50:44,460 /usr/include/python3.13/object.h:1014:25: warning: comparison between pointer and integer 2025-09-08T00:50:44,460 1014 | if (_tmp_old_op != NULL) { \ 2025-09-08T00:50:44,460 | ^~ 2025-09-08T00:50:44,461 rnacounter/rnacounter.c:33363:13: note: in expansion of macro ‘Py_CLEAR’ 2025-09-08T00:50:44,461 33363 | Py_CLEAR(f->f_back); 2025-09-08T00:50:44,461 | ^~~~~~~~ 2025-09-08T00:50:44,501 /usr/include/python3.13/object.h:1015:26: error: assignment to ‘int’ from ‘void *’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T00:50:44,502 1015 | *_tmp_op_ptr = _Py_NULL; \ 2025-09-08T00:50:44,502 | ^ 2025-09-08T00:50:44,502 rnacounter/rnacounter.c:33363:13: note: in expansion of macro ‘Py_CLEAR’ 2025-09-08T00:50:44,502 33363 | Py_CLEAR(f->f_back); 2025-09-08T00:50:44,502 | ^~~~~~~~ 2025-09-08T00:50:45,107 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-08T00:50:45,282 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T00:50:45,293 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T00:50:45,293 exec(compile('"'"''"'"''"'"' 2025-09-08T00:50:45,293 # This is -- a caller that pip uses to run setup.py 2025-09-08T00:50:45,293 # 2025-09-08T00:50:45,293 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T00:50:45,293 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T00:50:45,293 # - It provides a clear error message when setuptools is not installed. 2025-09-08T00:50:45,293 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T00:50:45,293 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T00:50:45,293 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T00:50:45,293 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T00:50:45,293 import os, sys, tokenize, traceback 2025-09-08T00:50:45,293 2025-09-08T00:50:45,293 try: 2025-09-08T00:50:45,293 import setuptools 2025-09-08T00:50:45,293 except ImportError: 2025-09-08T00:50:45,293 print( 2025-09-08T00:50:45,293 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T00:50:45,293 "the build environment with exception:", 2025-09-08T00:50:45,293 file=sys.stderr, 2025-09-08T00:50:45,293 ) 2025-09-08T00:50:45,293 traceback.print_exc() 2025-09-08T00:50:45,293 sys.exit(1) 2025-09-08T00:50:45,293 2025-09-08T00:50:45,293 __file__ = %r 2025-09-08T00:50:45,293 sys.argv[0] = __file__ 2025-09-08T00:50:45,293 2025-09-08T00:50:45,293 if os.path.exists(__file__): 2025-09-08T00:50:45,293 filename = __file__ 2025-09-08T00:50:45,293 with tokenize.open(__file__) as f: 2025-09-08T00:50:45,293 setup_py_code = f.read() 2025-09-08T00:50:45,293 else: 2025-09-08T00:50:45,293 filename = "" 2025-09-08T00:50:45,293 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T00:50:45,293 2025-09-08T00:50:45,293 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T00:50:45,293 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-8xrtwbvd/rnacounter_5f5ab06c6eee428d95638a92da4df2b0/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-pmv1cibe[/] 2025-09-08T00:50:45,293 [bold magenta]cwd[/]: /tmp/pip-wheel-8xrtwbvd/rnacounter_5f5ab06c6eee428d95638a92da4df2b0/ 2025-09-08T00:50:45,294 Building wheel for rnacounter (setup.py): finished with status 'error' 2025-09-08T00:50:45,294 ERROR: Failed building wheel for rnacounter 2025-09-08T00:50:45,295 Running setup.py clean for rnacounter 2025-09-08T00:50:45,296 Running command python setup.py clean 2025-09-08T00:50:46,191 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T00:50:46,191 warnings.warn(msg) 2025-09-08T00:50:46,655 running clean 2025-09-08T00:50:46,800 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T00:50:46,801 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T00:50:46,802 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T00:50:46,802 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T00:50:46,802 removing 'build' 2025-09-08T00:50:46,937 Failed to build rnacounter 2025-09-08T00:50:46,938 ERROR: Failed to build one or more wheels 2025-09-08T00:50:46,939 Exception information: 2025-09-08T00:50:46,939 Traceback (most recent call last): 2025-09-08T00:50:46,939 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T00:50:46,939 status = _inner_run() 2025-09-08T00:50:46,939 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T00:50:46,939 return self.run(options, args) 2025-09-08T00:50:46,939 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T00:50:46,939 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T00:50:46,939 return func(self, options, args) 2025-09-08T00:50:46,939 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T00:50:46,939 raise CommandError("Failed to build one or more wheels") 2025-09-08T00:50:46,939 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T00:50:46,943 Removed build tracker: '/tmp/pip-build-tracker-kb_76kbx'