2025-09-08T01:09:51,908 Created temporary directory: /tmp/pip-build-tracker-jbws5jr0 2025-09-08T01:09:51,909 Initialized build tracking at /tmp/pip-build-tracker-jbws5jr0 2025-09-08T01:09:51,909 Created build tracker: /tmp/pip-build-tracker-jbws5jr0 2025-09-08T01:09:51,909 Entered build tracker: /tmp/pip-build-tracker-jbws5jr0 2025-09-08T01:09:51,909 Created temporary directory: /tmp/pip-wheel-q575mewb 2025-09-08T01:09:51,912 Created temporary directory: /tmp/pip-ephem-wheel-cache-neljue7_ 2025-09-08T01:09:51,971 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T01:09:51,973 2 location(s) to search for versions of mozsci: 2025-09-08T01:09:51,973 * https://pypi.org/simple/mozsci/ 2025-09-08T01:09:51,973 * https://www.piwheels.org/simple/mozsci/ 2025-09-08T01:09:51,974 Fetching project page and analyzing links: https://pypi.org/simple/mozsci/ 2025-09-08T01:09:51,974 Getting page https://pypi.org/simple/mozsci/ 2025-09-08T01:09:51,975 Found index url https://pypi.org/simple/ 2025-09-08T01:09:52,044 Fetched page https://pypi.org/simple/mozsci/ as application/vnd.pypi.simple.v1+json 2025-09-08T01:09:52,045 Skipping link: No binaries permitted for mozsci: https://files.pythonhosted.org/packages/77/7a/e0f3c739bda4f12803eab4eb309819f5acd67eeabc4e83fc34a0a43c9640/mozsci-0.9.0-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/mozsci/) 2025-09-08T01:09:52,046 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/8e/de/a152197cc4478a2d10ad4616aa5b3cd02d325e953506d42b8dbba6c36fd0/mozsci-0.9.0-py2.7-macosx-10.10-intel.egg (from https://pypi.org/simple/mozsci/) 2025-09-08T01:09:52,046 Found link https://files.pythonhosted.org/packages/c3/8b/32a45f9d8d1f832060f657e2e640ca8295a753bbdf3d3b57ce33db89be4d/mozsci-0.9.0.tar.gz (from https://pypi.org/simple/mozsci/), version: 0.9.0 2025-09-08T01:09:52,046 Skipping link: No binaries permitted for mozsci: https://files.pythonhosted.org/packages/b4/d4/3198c09494925da462afc360c72430699a46cb9a080f4f8bc03241173119/mozsci-0.9.1-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/mozsci/) 2025-09-08T01:09:52,046 Found link https://files.pythonhosted.org/packages/f4/4a/d9934edbb5c51a11a65ade78a2d5a7268dd1bcc5439b214da62ff2b957b7/mozsci-0.9.1.tar.gz (from https://pypi.org/simple/mozsci/), version: 0.9.1 2025-09-08T01:09:52,046 Skipping link: No binaries permitted for mozsci: https://files.pythonhosted.org/packages/9a/86/5f29a929cb5acb95a5d74ad0d089100effa5c9d40c5287ea85c0418239d2/mozsci-0.9.2-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/mozsci/) 2025-09-08T01:09:52,046 Found link https://files.pythonhosted.org/packages/70/09/3d2ddb739aadeb93a04957f7e26c0405ff040020517e18181893e3c87628/mozsci-0.9.2.tar.gz (from https://pypi.org/simple/mozsci/), version: 0.9.2 2025-09-08T01:09:52,047 Fetching project page and analyzing links: https://www.piwheels.org/simple/mozsci/ 2025-09-08T01:09:52,047 Getting page https://www.piwheels.org/simple/mozsci/ 2025-09-08T01:09:52,048 Found index url https://www.piwheels.org/simple/ 2025-09-08T01:09:52,137 Fetched page https://www.piwheels.org/simple/mozsci/ as text/html 2025-09-08T01:09:52,141 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=8583aa821f81ec0b9c78605ee31c93afa1ef2bdf4884f05cbf88637f7a933fbc (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,142 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=8583aa821f81ec0b9c78605ee31c93afa1ef2bdf4884f05cbf88637f7a933fbc (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,142 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.2-cp35-cp35m-linux_armv6l.whl#sha256=6734f36ddcb85d718eee247ee751ed80c4db4ff012bce6ec5c8753285800ecf6 (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,142 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.2-cp35-cp35m-linux_armv7l.whl#sha256=6734f36ddcb85d718eee247ee751ed80c4db4ff012bce6ec5c8753285800ecf6 (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,142 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.2-cp34-cp34m-linux_armv7l.whl#sha256=2833bf5b737942054564ed478c25541c02c0f7cabdd815d8660f4f681b3d5f6d (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,142 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.2-cp34-cp34m-linux_armv6l.whl#sha256=2833bf5b737942054564ed478c25541c02c0f7cabdd815d8660f4f681b3d5f6d (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,142 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=19fc9dd7d3dce8d70eef5daa76e0673647ea2bcceecc21e565d56b8d0b81246c (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,142 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=19fc9dd7d3dce8d70eef5daa76e0673647ea2bcceecc21e565d56b8d0b81246c (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,143 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=e96f5dce460a1c26568a526948d76f697eea45a5ccc6f998ac6da2fcd18ff6eb (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,143 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=e96f5dce460a1c26568a526948d76f697eea45a5ccc6f998ac6da2fcd18ff6eb (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,143 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.1-cp35-cp35m-linux_armv7l.whl#sha256=cd17389e5a3fee7d24fad18d01e2f262b69f7fd1d882faa2ae065dade1b129a5 (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,143 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.1-cp35-cp35m-linux_armv6l.whl#sha256=cd17389e5a3fee7d24fad18d01e2f262b69f7fd1d882faa2ae065dade1b129a5 (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,143 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.1-cp34-cp34m-linux_armv7l.whl#sha256=a60498949802165e31c79b66b5fb3daa78bc752af87503567be6acb08e55facf (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,143 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.1-cp34-cp34m-linux_armv6l.whl#sha256=a60498949802165e31c79b66b5fb3daa78bc752af87503567be6acb08e55facf (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,143 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=01c802ce871152596c653828ecfaa107edc7e7316569d543e1a6d93bd2bdf868 (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,144 Skipping link: No binaries permitted for mozsci: https://archive1.piwheels.org/simple/mozsci/mozsci-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=01c802ce871152596c653828ecfaa107edc7e7316569d543e1a6d93bd2bdf868 (from https://www.piwheels.org/simple/mozsci/) 2025-09-08T01:09:52,144 Skipping link: not a file: https://www.piwheels.org/simple/mozsci/ 2025-09-08T01:09:52,144 Skipping link: not a file: https://pypi.org/simple/mozsci/ 2025-09-08T01:09:52,167 Given no hashes to check 1 links for project 'mozsci': discarding no candidates 2025-09-08T01:09:52,168 Collecting mozsci==0.9.1 2025-09-08T01:09:52,170 Created temporary directory: /tmp/pip-unpack-5wqntg6z 2025-09-08T01:09:52,307 Downloading mozsci-0.9.1.tar.gz (34 kB) 2025-09-08T01:09:52,352 Added mozsci==0.9.1 from https://files.pythonhosted.org/packages/f4/4a/d9934edbb5c51a11a65ade78a2d5a7268dd1bcc5439b214da62ff2b957b7/mozsci-0.9.1.tar.gz to build tracker '/tmp/pip-build-tracker-jbws5jr0' 2025-09-08T01:09:52,353 Running setup.py (path:/tmp/pip-wheel-q575mewb/mozsci_714f190a3efb464799e0e77e02fbec77/setup.py) egg_info for package mozsci 2025-09-08T01:09:52,353 Created temporary directory: /tmp/pip-pip-egg-info-j6bmw1ha 2025-09-08T01:09:52,353 Preparing metadata (setup.py): started 2025-09-08T01:09:52,354 Running command python setup.py egg_info 2025-09-08T01:09:53,648 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T01:09:53,648 !! 2025-09-08T01:09:53,649 ******************************************************************************** 2025-09-08T01:09:53,649 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T01:09:53,649 License :: OSI Approved :: MIT License 2025-09-08T01:09:53,649 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T01:09:53,649 ******************************************************************************** 2025-09-08T01:09:53,649 !! 2025-09-08T01:09:53,649 self._finalize_license_expression() 2025-09-08T01:09:53,722 running egg_info 2025-09-08T01:09:53,796 creating /tmp/pip-pip-egg-info-j6bmw1ha/mozsci.egg-info 2025-09-08T01:09:53,796 writing /tmp/pip-pip-egg-info-j6bmw1ha/mozsci.egg-info/PKG-INFO 2025-09-08T01:09:53,798 writing dependency_links to /tmp/pip-pip-egg-info-j6bmw1ha/mozsci.egg-info/dependency_links.txt 2025-09-08T01:09:53,798 writing requirements to /tmp/pip-pip-egg-info-j6bmw1ha/mozsci.egg-info/requires.txt 2025-09-08T01:09:53,799 writing top-level names to /tmp/pip-pip-egg-info-j6bmw1ha/mozsci.egg-info/top_level.txt 2025-09-08T01:09:53,799 writing manifest file '/tmp/pip-pip-egg-info-j6bmw1ha/mozsci.egg-info/SOURCES.txt' 2025-09-08T01:09:54,027 reading manifest file '/tmp/pip-pip-egg-info-j6bmw1ha/mozsci.egg-info/SOURCES.txt' 2025-09-08T01:09:54,028 reading manifest template 'MANIFEST.in' 2025-09-08T01:09:54,031 writing manifest file '/tmp/pip-pip-egg-info-j6bmw1ha/mozsci.egg-info/SOURCES.txt' 2025-09-08T01:09:54,167 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T01:09:54,172 Source in /tmp/pip-wheel-q575mewb/mozsci_714f190a3efb464799e0e77e02fbec77 has version 0.9.1, which satisfies requirement mozsci==0.9.1 from https://files.pythonhosted.org/packages/f4/4a/d9934edbb5c51a11a65ade78a2d5a7268dd1bcc5439b214da62ff2b957b7/mozsci-0.9.1.tar.gz 2025-09-08T01:09:54,172 Removed mozsci==0.9.1 from https://files.pythonhosted.org/packages/f4/4a/d9934edbb5c51a11a65ade78a2d5a7268dd1bcc5439b214da62ff2b957b7/mozsci-0.9.1.tar.gz from build tracker '/tmp/pip-build-tracker-jbws5jr0' 2025-09-08T01:09:54,177 Created temporary directory: /tmp/pip-unpack-6r5uss3p 2025-09-08T01:09:54,177 Created temporary directory: /tmp/pip-unpack-1vjki2c0 2025-09-08T01:09:54,177 Building wheels for collected packages: mozsci 2025-09-08T01:09:54,178 Created temporary directory: /tmp/pip-wheel-8ts174p8 2025-09-08T01:09:54,179 DEPRECATION: Building 'mozsci' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'mozsci'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T01:09:54,180 Building wheel for mozsci (setup.py): started 2025-09-08T01:09:54,180 Destination directory: /tmp/pip-wheel-8ts174p8 2025-09-08T01:09:54,181 Running command python setup.py bdist_wheel 2025-09-08T01:09:55,467 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T01:09:55,467 !! 2025-09-08T01:09:55,468 ******************************************************************************** 2025-09-08T01:09:55,468 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T01:09:55,468 License :: OSI Approved :: MIT License 2025-09-08T01:09:55,468 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T01:09:55,468 ******************************************************************************** 2025-09-08T01:09:55,468 !! 2025-09-08T01:09:55,468 self._finalize_license_expression() 2025-09-08T01:09:55,469 running bdist_wheel 2025-09-08T01:09:55,762 running build 2025-09-08T01:09:55,762 running build_py 2025-09-08T01:09:55,838 creating build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,839 copying mozsci/variables.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,839 copying mozsci/pca.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,840 copying mozsci/numpy_util.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,841 copying mozsci/map_train.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,841 copying mozsci/inputs.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,842 copying mozsci/histogram.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,842 copying mozsci/evaluation.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,843 copying mozsci/ems.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,843 copying mozsci/cross_validate.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,844 copying mozsci/__init__.py -> build/lib.linux-armv7l-cpython-313/mozsci 2025-09-08T01:09:55,844 creating build/lib.linux-armv7l-cpython-313/mozsci/models 2025-09-08T01:09:55,845 copying mozsci/models/logistic_regression.py -> build/lib.linux-armv7l-cpython-313/mozsci/models 2025-09-08T01:09:55,845 copying mozsci/models/linear_regression.py -> build/lib.linux-armv7l-cpython-313/mozsci/models 2025-09-08T01:09:55,846 copying mozsci/models/__init__.py -> build/lib.linux-armv7l-cpython-313/mozsci/models 2025-09-08T01:09:55,846 creating build/lib.linux-armv7l-cpython-313/mozsci/glm 2025-09-08T01:09:55,847 copying mozsci/glm/simplified_glm.py -> build/lib.linux-armv7l-cpython-313/mozsci/glm 2025-09-08T01:09:55,847 copying mozsci/glm/regularization.py -> build/lib.linux-armv7l-cpython-313/mozsci/glm 2025-09-08T01:09:55,848 copying mozsci/glm/prob_distributions.py -> build/lib.linux-armv7l-cpython-313/mozsci/glm 2025-09-08T01:09:55,848 copying mozsci/glm/__init__.py -> build/lib.linux-armv7l-cpython-313/mozsci/glm 2025-09-08T01:09:55,851 running build_ext 2025-09-08T01:09:56,269 Compiling mozsci/spearmanr_by_fast.pyx because it changed. 2025-09-08T01:09:56,269 [1/1] Cythonizing mozsci/spearmanr_by_fast.pyx 2025-09-08T01:09:57,676 Error compiling Cython file: 2025-09-08T01:09:57,676 ------------------------------------------------------------ 2025-09-08T01:09:57,676 ... 2025-09-08T01:09:57,676 # import both numpy and the Cython declarations for numpy 2025-09-08T01:09:57,676 import numpy as np 2025-09-08T01:09:57,676 cimport numpy as np 2025-09-08T01:09:57,677 # declare the interface to the C code 2025-09-08T01:09:57,677 cdef extern double c_spearman_for_python(double* a, double* b, np.int_t* byvar, int n) 2025-09-08T01:09:57,677 ^ 2025-09-08T01:09:57,677 ------------------------------------------------------------ 2025-09-08T01:09:57,677 mozsci/spearmanr_by_fast.pyx:9:63: 'int_t' is not a type identifier 2025-09-08T01:09:57,677 Error compiling Cython file: 2025-09-08T01:09:57,677 ------------------------------------------------------------ 2025-09-08T01:09:57,677 ... 2025-09-08T01:09:57,678 @cython.boundscheck(False) 2025-09-08T01:09:57,678 @cython.wraparound(False) 2025-09-08T01:09:57,678 def spearmanr_by(np.ndarray[double, ndim=1, mode="c"] a not None, 2025-09-08T01:09:57,678 np.ndarray[double, ndim=1, mode="c"] b not None, 2025-09-08T01:09:57,678 np.ndarray[np.int_t, ndim=1, mode="c"] byvar not None): 2025-09-08T01:09:57,678 ^ 2025-09-08T01:09:57,678 ------------------------------------------------------------ 2025-09-08T01:09:57,678 mozsci/spearmanr_by_fast.pyx:15:27: Invalid type. 2025-09-08T01:09:57,686 Traceback (most recent call last): 2025-09-08T01:09:57,693 File "", line 2, in 2025-09-08T01:09:57,693 exec(compile(''' 2025-09-08T01:09:57,694 ~~~~^^^^^^^^^^^^ 2025-09-08T01:09:57,694 # This is -- a caller that pip uses to run setup.py 2025-09-08T01:09:57,694 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:09:57,694 ...<32 lines>... 2025-09-08T01:09:57,694 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T01:09:57,694 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:09:57,694 ''' % ('/tmp/pip-wheel-q575mewb/mozsci_714f190a3efb464799e0e77e02fbec77/setup.py',), "", "exec")) 2025-09-08T01:09:57,694 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:09:57,694 File "", line 35, in 2025-09-08T01:09:57,695 File "/tmp/pip-wheel-q575mewb/mozsci_714f190a3efb464799e0e77e02fbec77/setup.py", line 42, in 2025-09-08T01:09:57,695 setup( 2025-09-08T01:09:57,695 ~~~~~^ 2025-09-08T01:09:57,695 name = 'mozsci', 2025-09-08T01:09:57,695 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:09:57,695 ...<23 lines>... 2025-09-08T01:09:57,695 ], 2025-09-08T01:09:57,695 ^^ 2025-09-08T01:09:57,695 ) 2025-09-08T01:09:57,696 ^ 2025-09-08T01:09:57,696 File "/usr/local/lib/python3.13/dist-packages/setuptools/__init__.py", line 115, in setup 2025-09-08T01:09:57,696 return distutils.core.setup(**attrs) 2025-09-08T01:09:57,696 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T01:09:57,696 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 186, in setup 2025-09-08T01:09:57,696 return run_commands(dist) 2025-09-08T01:09:57,696 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 202, in run_commands 2025-09-08T01:09:57,696 dist.run_commands() 2025-09-08T01:09:57,696 ~~~~~~~~~~~~~~~~~^^ 2025-09-08T01:09:57,696 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1002, in run_commands 2025-09-08T01:09:57,697 self.run_command(cmd) 2025-09-08T01:09:57,697 ~~~~~~~~~~~~~~~~^^^^^ 2025-09-08T01:09:57,697 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-08T01:09:57,697 super().run_command(command) 2025-09-08T01:09:57,697 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T01:09:57,697 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-08T01:09:57,698 cmd_obj.run() 2025-09-08T01:09:57,698 ~~~~~~~~~~~^^ 2025-09-08T01:09:57,698 File "/usr/local/lib/python3.13/dist-packages/setuptools/command/bdist_wheel.py", line 370, in run 2025-09-08T01:09:57,698 self.run_command("build") 2025-09-08T01:09:57,698 ~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T01:09:57,698 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command 2025-09-08T01:09:57,698 self.distribution.run_command(command) 2025-09-08T01:09:57,699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T01:09:57,699 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-08T01:09:57,699 super().run_command(command) 2025-09-08T01:09:57,699 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T01:09:57,699 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-08T01:09:57,699 cmd_obj.run() 2025-09-08T01:09:57,699 ~~~~~~~~~~~^^ 2025-09-08T01:09:57,699 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build.py", line 135, in run 2025-09-08T01:09:57,700 self.run_command(cmd_name) 2025-09-08T01:09:57,700 ~~~~~~~~~~~~~~~~^^^^^^^^^^ 2025-09-08T01:09:57,700 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command 2025-09-08T01:09:57,700 self.distribution.run_command(command) 2025-09-08T01:09:57,700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T01:09:57,700 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-08T01:09:57,700 super().run_command(command) 2025-09-08T01:09:57,700 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T01:09:57,701 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-08T01:09:57,701 cmd_obj.run() 2025-09-08T01:09:57,701 ~~~~~~~~~~~^^ 2025-09-08T01:09:57,701 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 368, in run 2025-09-08T01:09:57,701 self.build_extensions() 2025-09-08T01:09:57,701 ~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T01:09:57,701 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 484, in build_extensions 2025-09-08T01:09:57,701 self._build_extensions_serial() 2025-09-08T01:09:57,702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T01:09:57,702 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 510, in _build_extensions_serial 2025-09-08T01:09:57,702 self.build_extension(ext) 2025-09-08T01:09:57,702 ~~~~~~~~~~~~~~~~~~~~^^^^^ 2025-09-08T01:09:57,702 File "/usr/local/lib/python3.13/dist-packages/Cython/Distutils/build_ext.py", line 131, in build_extension 2025-09-08T01:09:57,702 new_ext = cythonize( 2025-09-08T01:09:57,702 ~~~~~~~~~^ 2025-09-08T01:09:57,702 ext,force=self.force, quiet=self.verbose == 0, **options 2025-09-08T01:09:57,703 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:09:57,703 )[0] 2025-09-08T01:09:57,703 ^ 2025-09-08T01:09:57,703 File "/usr/local/lib/python3.13/dist-packages/Cython/Build/Dependencies.py", line 1154, in cythonize 2025-09-08T01:09:57,703 cythonize_one(*args) 2025-09-08T01:09:57,703 ~~~~~~~~~~~~~^^^^^^^ 2025-09-08T01:09:57,703 File "/usr/local/lib/python3.13/dist-packages/Cython/Build/Dependencies.py", line 1298, in cythonize_one 2025-09-08T01:09:57,703 raise CompileError(None, pyx_file) 2025-09-08T01:09:57,704 Cython.Compiler.Errors.CompileError: mozsci/spearmanr_by_fast.pyx 2025-09-08T01:09:58,030 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T01:09:58,042 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T01:09:58,042 exec(compile('"'"''"'"''"'"' 2025-09-08T01:09:58,042 # This is -- a caller that pip uses to run setup.py 2025-09-08T01:09:58,042 # 2025-09-08T01:09:58,042 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T01:09:58,042 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T01:09:58,042 # - It provides a clear error message when setuptools is not installed. 2025-09-08T01:09:58,042 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T01:09:58,042 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T01:09:58,042 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T01:09:58,042 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T01:09:58,042 import os, sys, tokenize, traceback 2025-09-08T01:09:58,042 2025-09-08T01:09:58,042 try: 2025-09-08T01:09:58,042 import setuptools 2025-09-08T01:09:58,042 except ImportError: 2025-09-08T01:09:58,042 print( 2025-09-08T01:09:58,042 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T01:09:58,042 "the build environment with exception:", 2025-09-08T01:09:58,042 file=sys.stderr, 2025-09-08T01:09:58,042 ) 2025-09-08T01:09:58,042 traceback.print_exc() 2025-09-08T01:09:58,042 sys.exit(1) 2025-09-08T01:09:58,042 2025-09-08T01:09:58,042 __file__ = %r 2025-09-08T01:09:58,042 sys.argv[0] = __file__ 2025-09-08T01:09:58,042 2025-09-08T01:09:58,042 if os.path.exists(__file__): 2025-09-08T01:09:58,042 filename = __file__ 2025-09-08T01:09:58,042 with tokenize.open(__file__) as f: 2025-09-08T01:09:58,042 setup_py_code = f.read() 2025-09-08T01:09:58,042 else: 2025-09-08T01:09:58,042 filename = "" 2025-09-08T01:09:58,042 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T01:09:58,042 2025-09-08T01:09:58,042 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T01:09:58,042 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-q575mewb/mozsci_714f190a3efb464799e0e77e02fbec77/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-8ts174p8[/] 2025-09-08T01:09:58,043 [bold magenta]cwd[/]: /tmp/pip-wheel-q575mewb/mozsci_714f190a3efb464799e0e77e02fbec77/ 2025-09-08T01:09:58,043 Building wheel for mozsci (setup.py): finished with status 'error' 2025-09-08T01:09:58,044 ERROR: Failed building wheel for mozsci 2025-09-08T01:09:58,045 Running setup.py clean for mozsci 2025-09-08T01:09:58,046 Running command python setup.py clean 2025-09-08T01:09:59,327 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T01:09:59,328 !! 2025-09-08T01:09:59,328 ******************************************************************************** 2025-09-08T01:09:59,328 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T01:09:59,328 License :: OSI Approved :: MIT License 2025-09-08T01:09:59,328 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T01:09:59,328 ******************************************************************************** 2025-09-08T01:09:59,329 !! 2025-09-08T01:09:59,329 self._finalize_license_expression() 2025-09-08T01:09:59,403 running clean 2025-09-08T01:09:59,549 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T01:09:59,550 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T01:09:59,550 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T01:09:59,551 removing 'build' 2025-09-08T01:09:59,685 Failed to build mozsci 2025-09-08T01:09:59,686 ERROR: Failed to build one or more wheels 2025-09-08T01:09:59,687 Exception information: 2025-09-08T01:09:59,687 Traceback (most recent call last): 2025-09-08T01:09:59,687 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T01:09:59,687 status = _inner_run() 2025-09-08T01:09:59,687 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T01:09:59,687 return self.run(options, args) 2025-09-08T01:09:59,687 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T01:09:59,687 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T01:09:59,687 return func(self, options, args) 2025-09-08T01:09:59,687 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T01:09:59,687 raise CommandError("Failed to build one or more wheels") 2025-09-08T01:09:59,687 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T01:09:59,691 Removed build tracker: '/tmp/pip-build-tracker-jbws5jr0'