2025-09-08T01:29:01,385 Created temporary directory: /tmp/pip-build-tracker-2orrjpa5 2025-09-08T01:29:01,385 Initialized build tracking at /tmp/pip-build-tracker-2orrjpa5 2025-09-08T01:29:01,386 Created build tracker: /tmp/pip-build-tracker-2orrjpa5 2025-09-08T01:29:01,386 Entered build tracker: /tmp/pip-build-tracker-2orrjpa5 2025-09-08T01:29:01,386 Created temporary directory: /tmp/pip-wheel-7ut1skf6 2025-09-08T01:29:01,389 Created temporary directory: /tmp/pip-ephem-wheel-cache-jewbiysu 2025-09-08T01:29:01,449 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T01:29:01,451 2 location(s) to search for versions of cyvcf: 2025-09-08T01:29:01,451 * https://pypi.org/simple/cyvcf/ 2025-09-08T01:29:01,451 * https://www.piwheels.org/simple/cyvcf/ 2025-09-08T01:29:01,452 Fetching project page and analyzing links: https://pypi.org/simple/cyvcf/ 2025-09-08T01:29:01,452 Getting page https://pypi.org/simple/cyvcf/ 2025-09-08T01:29:01,453 Found index url https://pypi.org/simple/ 2025-09-08T01:29:01,522 Fetched page https://pypi.org/simple/cyvcf/ as application/vnd.pypi.simple.v1+json 2025-09-08T01:29:01,525 Found link https://files.pythonhosted.org/packages/ab/1c/3b96616eac9bec5ef29d98e9fa9234a1aafec736c726584e01f593a1a51a/cyvcf-0.1.6.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.6 2025-09-08T01:29:01,525 Found link https://files.pythonhosted.org/packages/be/9b/3eb6ef0e51a61fc05b0faa7f3fe4cd38e4b62b9714a306d38073f43bd0d6/cyvcf-0.1.7.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.7 2025-09-08T01:29:01,525 Found link https://files.pythonhosted.org/packages/eb/19/25c0ae63362dfafb53a9650e51900a8c3b227580e8637702319c4dc27573/cyvcf-0.1.8.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.8 2025-09-08T01:29:01,525 Found link https://files.pythonhosted.org/packages/20/67/ca25ac7a32d6c3894e71979928cd9a369641be803c25a7dc6c9d6cfefe7c/cyvcf-0.1.9.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.9 2025-09-08T01:29:01,526 Found link https://files.pythonhosted.org/packages/62/ce/e97405cde989dda7b086ece37b79380f45d65def341b1c177e2fbd2ee971/cyvcf-0.1.9.1.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.9.1 2025-09-08T01:29:01,526 Found link https://files.pythonhosted.org/packages/96/3d/7b6e79e6faf32ebc31c57b2ab16c8b60ab0b67970395d46258e0180ed1cd/cyvcf-0.1.9.2.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.9.2 2025-09-08T01:29:01,526 Found link https://files.pythonhosted.org/packages/bd/92/ce640444cc052652da214865715d7598d6c25feade9fec7e8446940ad2b9/cyvcf-0.1.10.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.10 2025-09-08T01:29:01,526 Found link https://files.pythonhosted.org/packages/83/3f/ef0e0bc3dc540be73f06bac54a0e0e539d6fa4d599c301bd352a0b5556ba/cyvcf-0.1.11.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.11 2025-09-08T01:29:01,527 Found link https://files.pythonhosted.org/packages/b1/0b/0f7fab698e10d3911960c90f92e15e25ed8a9c66650910bbb13eb862e5e2/cyvcf-0.1.12.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.12 2025-09-08T01:29:01,527 Found link https://files.pythonhosted.org/packages/82/2a/cfd26a7045da2e2e17008b65035d17fbe86ddf59819ffe59b437080e3e54/cyvcf-0.1.13.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.13 2025-09-08T01:29:01,527 Found link https://files.pythonhosted.org/packages/77/1d/0deac2321d13f7eef56842958a86fc026c6ea0badb8c998d6cd997335d80/cyvcf-0.1.14.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.14 2025-09-08T01:29:01,527 Found link https://files.pythonhosted.org/packages/3d/01/c5d741775264e4dc6b5562f5b40f3bbb6c5aec07e51171ded49084c6d031/cyvcf-0.1.15.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.15 2025-09-08T01:29:01,527 Found link https://files.pythonhosted.org/packages/d9/6d/2b9effdb5f6f4b17f764e115ee39d60479c5f9e4b2570b0846b033684ef2/cyvcf-0.1.16.tar.gz (from https://pypi.org/simple/cyvcf/), version: 0.1.16 2025-09-08T01:29:01,528 Fetching project page and analyzing links: https://www.piwheels.org/simple/cyvcf/ 2025-09-08T01:29:01,528 Getting page https://www.piwheels.org/simple/cyvcf/ 2025-09-08T01:29:01,529 Found index url https://www.piwheels.org/simple/ 2025-09-08T01:29:01,628 Fetched page https://www.piwheels.org/simple/cyvcf/ as text/html 2025-09-08T01:29:01,629 Skipping link: not a file: https://www.piwheels.org/simple/cyvcf/ 2025-09-08T01:29:01,630 Skipping link: not a file: https://pypi.org/simple/cyvcf/ 2025-09-08T01:29:01,654 Given no hashes to check 1 links for project 'cyvcf': discarding no candidates 2025-09-08T01:29:01,655 Collecting cyvcf==0.1.13 2025-09-08T01:29:01,657 Created temporary directory: /tmp/pip-unpack-9os470f4 2025-09-08T01:29:01,806 Downloading cyvcf-0.1.13.tar.gz (158 kB) 2025-09-08T01:29:01,878 Added cyvcf==0.1.13 from https://files.pythonhosted.org/packages/82/2a/cfd26a7045da2e2e17008b65035d17fbe86ddf59819ffe59b437080e3e54/cyvcf-0.1.13.tar.gz to build tracker '/tmp/pip-build-tracker-2orrjpa5' 2025-09-08T01:29:01,879 Running setup.py (path:/tmp/pip-wheel-7ut1skf6/cyvcf_0699b5f1251b4942ab448bebaddd1edb/setup.py) egg_info for package cyvcf 2025-09-08T01:29:01,879 Created temporary directory: /tmp/pip-pip-egg-info-c15flukd 2025-09-08T01:29:01,879 Preparing metadata (setup.py): started 2025-09-08T01:29:01,880 Running command python setup.py egg_info 2025-09-08T01:29:02,403 Traceback (most recent call last): 2025-09-08T01:29:02,405 File "", line 2, in 2025-09-08T01:29:02,405 exec(compile(''' 2025-09-08T01:29:02,405 ~~~~^^^^^^^^^^^^ 2025-09-08T01:29:02,405 # This is -- a caller that pip uses to run setup.py 2025-09-08T01:29:02,405 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,405 ...<32 lines>... 2025-09-08T01:29:02,405 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T01:29:02,405 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,406 ''' % ('/tmp/pip-wheel-7ut1skf6/cyvcf_0699b5f1251b4942ab448bebaddd1edb/setup.py',), "", "exec")) 2025-09-08T01:29:02,406 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,406 File "", line 35, in 2025-09-08T01:29:02,406 File "/tmp/pip-wheel-7ut1skf6/cyvcf_0699b5f1251b4942ab448bebaddd1edb/setup.py", line 1, in 2025-09-08T01:29:02,406 import ez_setup 2025-09-08T01:29:02,406 File "/tmp/pip-wheel-7ut1skf6/cyvcf_0699b5f1251b4942ab448bebaddd1edb/ez_setup.py", line 106 2025-09-08T01:29:02,406 except pkg_resources.VersionConflict, e: 2025-09-08T01:29:02,406 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,407 SyntaxError: multiple exception types must be parenthesized 2025-09-08T01:29:02,491 ERROR: python setup.py egg_info exited with 1 2025-09-08T01:29:02,502 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T01:29:02,502 exec(compile('"'"''"'"''"'"' 2025-09-08T01:29:02,502 # This is -- a caller that pip uses to run setup.py 2025-09-08T01:29:02,502 # 2025-09-08T01:29:02,502 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T01:29:02,502 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T01:29:02,502 # - It provides a clear error message when setuptools is not installed. 2025-09-08T01:29:02,502 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T01:29:02,502 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T01:29:02,502 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T01:29:02,502 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T01:29:02,502 import os, sys, tokenize, traceback 2025-09-08T01:29:02,502 2025-09-08T01:29:02,502 try: 2025-09-08T01:29:02,502 import setuptools 2025-09-08T01:29:02,502 except ImportError: 2025-09-08T01:29:02,502 print( 2025-09-08T01:29:02,502 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T01:29:02,502 "the build environment with exception:", 2025-09-08T01:29:02,502 file=sys.stderr, 2025-09-08T01:29:02,502 ) 2025-09-08T01:29:02,502 traceback.print_exc() 2025-09-08T01:29:02,502 sys.exit(1) 2025-09-08T01:29:02,502 2025-09-08T01:29:02,502 __file__ = %r 2025-09-08T01:29:02,502 sys.argv[0] = __file__ 2025-09-08T01:29:02,502 2025-09-08T01:29:02,502 if os.path.exists(__file__): 2025-09-08T01:29:02,502 filename = __file__ 2025-09-08T01:29:02,502 with tokenize.open(__file__) as f: 2025-09-08T01:29:02,502 setup_py_code = f.read() 2025-09-08T01:29:02,502 else: 2025-09-08T01:29:02,502 filename = "" 2025-09-08T01:29:02,502 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T01:29:02,502 2025-09-08T01:29:02,502 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T01:29:02,502 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-7ut1skf6/cyvcf_0699b5f1251b4942ab448bebaddd1edb/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-c15flukd[/] 2025-09-08T01:29:02,503 [bold magenta]cwd[/]: /tmp/pip-wheel-7ut1skf6/cyvcf_0699b5f1251b4942ab448bebaddd1edb/ 2025-09-08T01:29:02,503 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T01:29:02,504 ERROR: metadata generation failed 2025-09-08T01:29:02,509 Exception information: 2025-09-08T01:29:02,509 Traceback (most recent call last): 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T01:29:02,509 call_subprocess( 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~^ 2025-09-08T01:29:02,509 args, 2025-09-08T01:29:02,509 ^^^^^ 2025-09-08T01:29:02,509 ...<2 lines>... 2025-09-08T01:29:02,509 spinner=spinner, 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 ) 2025-09-08T01:29:02,509 ^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T01:29:02,509 raise error 2025-09-08T01:29:02,509 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T01:29:02,509 2025-09-08T01:29:02,509 The above exception was the direct cause of the following exception: 2025-09-08T01:29:02,509 2025-09-08T01:29:02,509 Traceback (most recent call last): 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T01:29:02,509 status = _inner_run() 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T01:29:02,509 return self.run(options, args) 2025-09-08T01:29:02,509 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T01:29:02,509 return func(self, options, args) 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T01:29:02,509 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T01:29:02,509 result = self._result = resolver.resolve( 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~^ 2025-09-08T01:29:02,509 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 ) 2025-09-08T01:29:02,509 ^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T01:29:02,509 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T01:29:02,509 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T01:29:02,509 if not criterion.candidates: 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T01:29:02,509 return bool(self._sequence) 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T01:29:02,509 self._bool = any(self) 2025-09-08T01:29:02,509 ~~~^^^^^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T01:29:02,509 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T01:29:02,509 ^^^^^^^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T01:29:02,509 candidate = func() 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T01:29:02,509 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T01:29:02,509 link, template, name, version 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 ) 2025-09-08T01:29:02,509 ^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T01:29:02,509 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~^ 2025-09-08T01:29:02,509 link, 2025-09-08T01:29:02,509 ^^^^^ 2025-09-08T01:29:02,509 ...<3 lines>... 2025-09-08T01:29:02,509 version=version, 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 ) 2025-09-08T01:29:02,509 ^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T01:29:02,509 super().__init__( 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~^ 2025-09-08T01:29:02,509 link=link, 2025-09-08T01:29:02,509 ^^^^^^^^^^ 2025-09-08T01:29:02,509 ...<4 lines>... 2025-09-08T01:29:02,509 version=version, 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 ) 2025-09-08T01:29:02,509 ^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T01:29:02,509 self.dist = self._prepare() 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T01:29:02,509 dist = self._prepare_distribution() 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T01:29:02,509 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T01:29:02,509 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T01:29:02,509 dist = _get_prepared_distribution( 2025-09-08T01:29:02,509 req, 2025-09-08T01:29:02,509 ...<3 lines>... 2025-09-08T01:29:02,509 self.check_build_deps, 2025-09-08T01:29:02,509 ) 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T01:29:02,509 abstract_dist.prepare_distribution_metadata( 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T01:29:02,509 finder, build_isolation, check_build_deps 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 ) 2025-09-08T01:29:02,509 ^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T01:29:02,509 self.req.prepare_metadata() 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T01:29:02,509 self.metadata_directory = generate_metadata_legacy( 2025-09-08T01:29:02,509 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T01:29:02,509 build_env=self.build_env, 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 ...<3 lines>... 2025-09-08T01:29:02,509 details=details, 2025-09-08T01:29:02,509 ^^^^^^^^^^^^^^^^ 2025-09-08T01:29:02,509 ) 2025-09-08T01:29:02,509 ^ 2025-09-08T01:29:02,509 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T01:29:02,509 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T01:29:02,509 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T01:29:02,534 Removed cyvcf==0.1.13 from https://files.pythonhosted.org/packages/82/2a/cfd26a7045da2e2e17008b65035d17fbe86ddf59819ffe59b437080e3e54/cyvcf-0.1.13.tar.gz from build tracker '/tmp/pip-build-tracker-2orrjpa5' 2025-09-08T01:29:02,534 Removed build tracker: '/tmp/pip-build-tracker-2orrjpa5'