2025-09-08T02:03:30,228 Created temporary directory: /tmp/pip-build-tracker-wh0176ru 2025-09-08T02:03:30,228 Initialized build tracking at /tmp/pip-build-tracker-wh0176ru 2025-09-08T02:03:30,228 Created build tracker: /tmp/pip-build-tracker-wh0176ru 2025-09-08T02:03:30,228 Entered build tracker: /tmp/pip-build-tracker-wh0176ru 2025-09-08T02:03:30,229 Created temporary directory: /tmp/pip-wheel-8iuef58b 2025-09-08T02:03:30,232 Created temporary directory: /tmp/pip-ephem-wheel-cache-iew30duj 2025-09-08T02:03:30,289 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T02:03:30,291 2 location(s) to search for versions of bhmm: 2025-09-08T02:03:30,291 * https://pypi.org/simple/bhmm/ 2025-09-08T02:03:30,291 * https://www.piwheels.org/simple/bhmm/ 2025-09-08T02:03:30,292 Fetching project page and analyzing links: https://pypi.org/simple/bhmm/ 2025-09-08T02:03:30,292 Getting page https://pypi.org/simple/bhmm/ 2025-09-08T02:03:30,293 Found index url https://pypi.org/simple/ 2025-09-08T02:03:30,438 Fetched page https://pypi.org/simple/bhmm/ as application/vnd.pypi.simple.v1+json 2025-09-08T02:03:30,441 Found link https://files.pythonhosted.org/packages/61/56/3de716dfa04d42acf328f665889a2ac487421543ad38ad44f4e55f8155d6/bhmm-0.3.0.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.3.0 2025-09-08T02:03:30,441 Found link https://files.pythonhosted.org/packages/b3/52/116bf9a87fb6d56bca3d8d0c87bef8597b43e6cf0a6f2bf4aca530e4ce7f/bhmm-0.4.2.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.4.2 2025-09-08T02:03:30,442 Found link https://files.pythonhosted.org/packages/ca/58/c0eb124efbdf18cb62675a16788ec84b541a4358ebf46e1add74284c9f02/bhmm-0.5.0.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.5.0 2025-09-08T02:03:30,442 Found link https://files.pythonhosted.org/packages/91/b4/c01c15efdab2a542db8cae6d49ab860644eea174a3822685cef3a3ed93ac/bhmm-0.5.1.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.5.1 2025-09-08T02:03:30,442 Found link https://files.pythonhosted.org/packages/14/17/9043b8dfb2d04ab7de09b3057d37c1385056d63702e4cca539b121e806e6/bhmm-0.5.2.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.5.2 2025-09-08T02:03:30,443 Found link https://files.pythonhosted.org/packages/ee/78/d607b2d74022a4146c5d1940f9e78ffaaabc55c1defdbe9ddcba92ba08a4/bhmm-0.5.3.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.5.3 2025-09-08T02:03:30,443 Found link https://files.pythonhosted.org/packages/a0/16/4ab0903a8a3a9ae3337193221d223b8e2fe8701960b680018bbec5342a03/bhmm-0.6.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.6 2025-09-08T02:03:30,443 Found link https://files.pythonhosted.org/packages/b9/6c/552b35b4765fadfcfe796b2b6d28fe38d622a28b74dd882f7980a4acb699/bhmm-0.6.1.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.6.1 2025-09-08T02:03:30,443 Found link https://files.pythonhosted.org/packages/10/9c/abea596a522277674836b8ec398a30092933826cffc04ad1823be0f06b5c/bhmm-0.6.2.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.6.2 2025-09-08T02:03:30,444 Found link https://files.pythonhosted.org/packages/ac/91/27b35bfc73cfe529ed9d4133b2fa20180ccaa2c6c9f55e49779f1319ecf0/bhmm-0.6.3.tar.gz (from https://pypi.org/simple/bhmm/), version: 0.6.3 2025-09-08T02:03:30,444 Fetching project page and analyzing links: https://www.piwheels.org/simple/bhmm/ 2025-09-08T02:03:30,445 Getting page https://www.piwheels.org/simple/bhmm/ 2025-09-08T02:03:30,446 Found index url https://www.piwheels.org/simple/ 2025-09-08T02:03:30,543 Fetched page https://www.piwheels.org/simple/bhmm/ as text/html 2025-09-08T02:03:30,561 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.3-cp37-cp37m-linux_armv7l.whl#sha256=4ec0ac3f2a903925c89b7c2fb47346fdee1b7290cd6ec8cf958b9e662d8c6378 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,561 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.3-cp37-cp37m-linux_armv6l.whl#sha256=4ec0ac3f2a903925c89b7c2fb47346fdee1b7290cd6ec8cf958b9e662d8c6378 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,561 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.3-cp34-cp34m-linux_armv7l.whl#sha256=b9e247a24e578c4d3590484ee23fa0e65aef323708fdfaf2d6d014c0cced2502 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,562 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.3-cp34-cp34m-linux_armv6l.whl#sha256=b9e247a24e578c4d3590484ee23fa0e65aef323708fdfaf2d6d014c0cced2502 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,562 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.3-cp35-cp35m-linux_armv7l.whl#sha256=5ed22f5e57c49806f9d1bea4e69ea244088880e65fdb1ce4c651521523c4f75b (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,562 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.3-cp35-cp35m-linux_armv6l.whl#sha256=5ed22f5e57c49806f9d1bea4e69ea244088880e65fdb1ce4c651521523c4f75b (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,562 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.3-cp39-cp39-linux_armv6l.whl#sha256=bab4a0c2dcf1dbfa68777c0c5436fb09aeb9dc373cb0e9ebc58182317f6d371b (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,562 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.3-cp39-cp39-linux_armv7l.whl#sha256=bab4a0c2dcf1dbfa68777c0c5436fb09aeb9dc373cb0e9ebc58182317f6d371b (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,562 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.2-cp37-cp37m-linux_armv6l.whl#sha256=d134a8ffa0cc939c60bbdc8f50328c6faa40ed6be7b14f18f95980337a5b1190 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,563 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.2-cp37-cp37m-linux_armv7l.whl#sha256=d134a8ffa0cc939c60bbdc8f50328c6faa40ed6be7b14f18f95980337a5b1190 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,563 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.2-cp34-cp34m-linux_armv6l.whl#sha256=17fdb13a35cce40bf24377e03b63d6f02e8e438ac82749e7e7b683260105fad2 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,563 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.2-cp34-cp34m-linux_armv7l.whl#sha256=17fdb13a35cce40bf24377e03b63d6f02e8e438ac82749e7e7b683260105fad2 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,563 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.2-cp35-cp35m-linux_armv6l.whl#sha256=c8089719c420e913c1872f95d2e5dc9c1bd0a84ccfda08814d46b0a38ecc5e22 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,563 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.2-cp35-cp35m-linux_armv7l.whl#sha256=c8089719c420e913c1872f95d2e5dc9c1bd0a84ccfda08814d46b0a38ecc5e22 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,563 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.2-cp39-cp39-linux_armv6l.whl#sha256=cfa3bbe7b843bd1761bd1e7931feba48bba77a36fea05875588de54959393883 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,564 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.2-cp39-cp39-linux_armv7l.whl#sha256=cfa3bbe7b843bd1761bd1e7931feba48bba77a36fea05875588de54959393883 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,564 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.1-cp37-cp37m-linux_armv7l.whl#sha256=dd12fa00df9075176f48d9e1c3b98cdfa0f0681591c7224f70ad1d2133b44871 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,564 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.1-cp37-cp37m-linux_armv6l.whl#sha256=dd12fa00df9075176f48d9e1c3b98cdfa0f0681591c7224f70ad1d2133b44871 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,564 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.1-cp35-cp35m-linux_armv7l.whl#sha256=18fbd9720e2d609c2f9f4c2e6dde1c786d1f266532e6b867d2c849f83562c30e (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,564 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.1-cp35-cp35m-linux_armv6l.whl#sha256=18fbd9720e2d609c2f9f4c2e6dde1c786d1f266532e6b867d2c849f83562c30e (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,564 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.1-cp34-cp34m-linux_armv6l.whl#sha256=803f4aab76db17be0f78da026e6e358fd74fd7559f41ab42c87980ee18373e17 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,564 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.1-cp34-cp34m-linux_armv7l.whl#sha256=803f4aab76db17be0f78da026e6e358fd74fd7559f41ab42c87980ee18373e17 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,565 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.1-cp39-cp39-linux_armv6l.whl#sha256=bdde2fb855e13c3cdf17d9cd584f787f701e5f0702e9dab89fb3a6cf47cae083 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,565 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6.1-cp39-cp39-linux_armv7l.whl#sha256=bdde2fb855e13c3cdf17d9cd584f787f701e5f0702e9dab89fb3a6cf47cae083 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,565 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6-cp37-cp37m-linux_armv7l.whl#sha256=cdd5d8c5da75e2084b4b050ae8ed529a675064f4cc96dee9725ad07998862b06 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,565 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6-cp37-cp37m-linux_armv6l.whl#sha256=cdd5d8c5da75e2084b4b050ae8ed529a675064f4cc96dee9725ad07998862b06 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,565 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6-cp35-cp35m-linux_armv7l.whl#sha256=685cc91daf2657ea8cdf9e6fe8da72fba483a5c5ce648b397679b34d84f6beaa (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,565 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6-cp35-cp35m-linux_armv6l.whl#sha256=685cc91daf2657ea8cdf9e6fe8da72fba483a5c5ce648b397679b34d84f6beaa (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,566 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6-cp34-cp34m-linux_armv6l.whl#sha256=67c75cb687ac1b5d03fb5a68f7816734ece40e51f74c04af3d9efcb7ef16189a (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,566 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6-cp34-cp34m-linux_armv7l.whl#sha256=67c75cb687ac1b5d03fb5a68f7816734ece40e51f74c04af3d9efcb7ef16189a (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,566 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6-cp39-cp39-linux_armv6l.whl#sha256=5f78f1788ead63c7b135da11057a1f93bb9ee9b53ee60d6a23ec66c68029d69a (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,566 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.6-cp39-cp39-linux_armv7l.whl#sha256=5f78f1788ead63c7b135da11057a1f93bb9ee9b53ee60d6a23ec66c68029d69a (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,566 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.3-cp37-cp37m-linux_armv6l.whl#sha256=41940d572d83890cbe65f2bbbd6e098c3055da674f589d83218342576ac1b1a8 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,566 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.3-cp37-cp37m-linux_armv7l.whl#sha256=41940d572d83890cbe65f2bbbd6e098c3055da674f589d83218342576ac1b1a8 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,567 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.3-cp34-cp34m-linux_armv6l.whl#sha256=cdcd8a651f6f78b839beb0a532ae4769690edc3df4f0915eb775b5ac9815ffeb (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,567 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.3-cp34-cp34m-linux_armv7l.whl#sha256=cdcd8a651f6f78b839beb0a532ae4769690edc3df4f0915eb775b5ac9815ffeb (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,567 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.3-cp35-cp35m-linux_armv6l.whl#sha256=6ac06e749cd23ac0ee1cea581033d008422014843887c7d0c2e5e344b2c40a93 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,567 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.3-cp35-cp35m-linux_armv7l.whl#sha256=6ac06e749cd23ac0ee1cea581033d008422014843887c7d0c2e5e344b2c40a93 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,567 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.3-cp39-cp39-linux_armv6l.whl#sha256=c1af27a33547e53d7864ba10d1a89fd712a119fb74d98b620e6655dc3db5527d (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,567 Skipping link: No binaries permitted for bhmm: 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https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,568 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.2-cp34-cp34m-linux_armv7l.whl#sha256=49906714ddbb618c70539e92ca81e145664a28f3242b6fe9f467ccfd05670e37 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,568 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.2-cp35-cp35m-linux_armv7l.whl#sha256=3f08cd269e5eb0b67ccdae87ecb51f2201bd3819a7112280755b3b026cc23e4b (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,568 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.2-cp35-cp35m-linux_armv6l.whl#sha256=3f08cd269e5eb0b67ccdae87ecb51f2201bd3819a7112280755b3b026cc23e4b (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,568 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.2-cp39-cp39-linux_armv6l.whl#sha256=c8fdf539ded3eacc6f6d66ff166c76de766e75f50a591645b8eb8c4b879ceb5a (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,569 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.2-cp39-cp39-linux_armv7l.whl#sha256=c8fdf539ded3eacc6f6d66ff166c76de766e75f50a591645b8eb8c4b879ceb5a (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,569 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.1-cp37-cp37m-linux_armv7l.whl#sha256=dce9caca546882b124ca4052b8f59b09ee84f275d995cd7e214db38c8a285b52 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,569 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.1-cp37-cp37m-linux_armv6l.whl#sha256=dce9caca546882b124ca4052b8f59b09ee84f275d995cd7e214db38c8a285b52 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,569 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.1-cp34-cp34m-linux_armv6l.whl#sha256=cfb3e29c179c4fb1be34ae5007489c5069a2a228951d2d02a427b89656bb2ade (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,569 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.1-cp34-cp34m-linux_armv7l.whl#sha256=cfb3e29c179c4fb1be34ae5007489c5069a2a228951d2d02a427b89656bb2ade (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,569 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.1-cp35-cp35m-linux_armv6l.whl#sha256=2b146848ca66626b612c499be2b626e427289e7d3ae9fafbb1b8df39a2769b15 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,569 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.1-cp35-cp35m-linux_armv7l.whl#sha256=2b146848ca66626b612c499be2b626e427289e7d3ae9fafbb1b8df39a2769b15 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,569 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.1-cp39-cp39-linux_armv6l.whl#sha256=49ea7b84b8534ac5b9669a6983880c95e89bfe4f9316715e150ae93cc642f219 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.1-cp39-cp39-linux_armv7l.whl#sha256=49ea7b84b8534ac5b9669a6983880c95e89bfe4f9316715e150ae93cc642f219 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.0-cp35-cp35m-linux_armv7l.whl#sha256=45d45de891e6a1290f36f8d056925f3ee87664ed10d15d3ad6ffad676c2ad716 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.0-cp35-cp35m-linux_armv6l.whl#sha256=45d45de891e6a1290f36f8d056925f3ee87664ed10d15d3ad6ffad676c2ad716 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.0-cp37-cp37m-linux_armv7l.whl#sha256=ae5ad6e9f709cc128277c9f32d2ad25efceedd28e705911cd4e3150ea7b10db0 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.0-cp37-cp37m-linux_armv6l.whl#sha256=ae5ad6e9f709cc128277c9f32d2ad25efceedd28e705911cd4e3150ea7b10db0 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.0-cp34-cp34m-linux_armv6l.whl#sha256=189d05138bbfc5aeaaa31c4892827b19b66e46c97d7ed9381a2db7f3b635b0f2 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.0-cp34-cp34m-linux_armv7l.whl#sha256=189d05138bbfc5aeaaa31c4892827b19b66e46c97d7ed9381a2db7f3b635b0f2 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.0-cp39-cp39-linux_armv6l.whl#sha256=533312a4461b5d17a67d6fe03b2ac16c53804f87f2548b68d086f961cd0d038c (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,570 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.5.0-cp39-cp39-linux_armv7l.whl#sha256=533312a4461b5d17a67d6fe03b2ac16c53804f87f2548b68d086f961cd0d038c (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,571 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.4.2-cp37-cp37m-linux_armv7l.whl#sha256=f433a6c8b30c9ea03e56dacff4d30df79a25a0896dc4dcf25ff5b3222f753295 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,571 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.4.2-cp37-cp37m-linux_armv6l.whl#sha256=f433a6c8b30c9ea03e56dacff4d30df79a25a0896dc4dcf25ff5b3222f753295 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,571 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.4.2-cp34-cp34m-linux_armv6l.whl#sha256=3a0ae1b1383860db030afb75f63c172e988a59e7c72a8a4cd906ba3612782224 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,571 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.4.2-cp34-cp34m-linux_armv7l.whl#sha256=3a0ae1b1383860db030afb75f63c172e988a59e7c72a8a4cd906ba3612782224 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,571 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.4.2-cp35-cp35m-linux_armv7l.whl#sha256=74b374c7e8c94b16ddec47a689b453e34cc3ef86973841ea42f0d198a24d528b (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,571 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.4.2-cp35-cp35m-linux_armv6l.whl#sha256=74b374c7e8c94b16ddec47a689b453e34cc3ef86973841ea42f0d198a24d528b (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,571 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.4.2-cp39-cp39-linux_armv6l.whl#sha256=551511474e0726681df911bd0a1590171ffd3c116b31afe2acb2197eb457616e (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,571 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.4.2-cp39-cp39-linux_armv7l.whl#sha256=551511474e0726681df911bd0a1590171ffd3c116b31afe2acb2197eb457616e (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,572 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.3.0-cp35-cp35m-linux_armv6l.whl#sha256=e41e9f66c404bb2c839993810551199c5166a7f7988fde210673a96d666d4ad4 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,572 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.3.0-cp35-cp35m-linux_armv7l.whl#sha256=e41e9f66c404bb2c839993810551199c5166a7f7988fde210673a96d666d4ad4 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,572 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.3.0-cp37-cp37m-linux_armv7l.whl#sha256=9899f482fa65f3e376647b752f3379f95c45624050d0dab4a126f94803e64839 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,572 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.3.0-cp37-cp37m-linux_armv6l.whl#sha256=9899f482fa65f3e376647b752f3379f95c45624050d0dab4a126f94803e64839 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,572 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.3.0-cp34-cp34m-linux_armv6l.whl#sha256=a50bd150c4b0a2f65b4587141aa16f8b5ae091068c19bdd42d65fe756ab2d3b0 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,572 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.3.0-cp34-cp34m-linux_armv7l.whl#sha256=a50bd150c4b0a2f65b4587141aa16f8b5ae091068c19bdd42d65fe756ab2d3b0 (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,572 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.3.0-cp39-cp39-linux_armv6l.whl#sha256=097bb936f3aed9897c485446deef42315285aa744f2c91ea97ca79e517c7097a (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,572 Skipping link: No binaries permitted for bhmm: https://archive1.piwheels.org/simple/bhmm/bhmm-0.3.0-cp39-cp39-linux_armv7l.whl#sha256=097bb936f3aed9897c485446deef42315285aa744f2c91ea97ca79e517c7097a (from https://www.piwheels.org/simple/bhmm/) 2025-09-08T02:03:30,573 Skipping link: not a file: https://www.piwheels.org/simple/bhmm/ 2025-09-08T02:03:30,573 Skipping link: not a file: https://pypi.org/simple/bhmm/ 2025-09-08T02:03:30,595 Given no hashes to check 1 links for project 'bhmm': discarding no candidates 2025-09-08T02:03:30,596 Collecting bhmm==0.3.0 2025-09-08T02:03:30,598 Created temporary directory: /tmp/pip-unpack-ffl29avt 2025-09-08T02:03:31,053 Downloading bhmm-0.3.0.tar.gz (5.8 MB) 2025-09-08T02:03:32,234 Added bhmm==0.3.0 from https://files.pythonhosted.org/packages/61/56/3de716dfa04d42acf328f665889a2ac487421543ad38ad44f4e55f8155d6/bhmm-0.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-wh0176ru' 2025-09-08T02:03:32,235 Running setup.py (path:/tmp/pip-wheel-8iuef58b/bhmm_edc9ef31e37f417ea46af16f34e8936b/setup.py) egg_info for package bhmm 2025-09-08T02:03:32,236 Created temporary directory: /tmp/pip-pip-egg-info-0rvz832z 2025-09-08T02:03:32,236 Preparing metadata (setup.py): started 2025-09-08T02:03:32,237 Running command python setup.py egg_info 2025-09-08T02:03:36,779 Compiling ./bhmm/hidden/impl_c/hidden.pyx because it changed. 2025-09-08T02:03:36,779 Compiling ./bhmm/output_models/impl_c/gaussian.pyx because it changed. 2025-09-08T02:03:36,779 Compiling ./bhmm/msm/tmatrix_sampling.pyx because it changed. 2025-09-08T02:03:36,779 [1/3] Cythonizing ./bhmm/hidden/impl_c/hidden.pyx 2025-09-08T02:03:36,779 [2/3] Cythonizing ./bhmm/msm/tmatrix_sampling.pyx 2025-09-08T02:03:36,779 [3/3] Cythonizing ./bhmm/output_models/impl_c/gaussian.pyx 2025-09-08T02:03:37,178 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T02:03:37,179 !! 2025-09-08T02:03:37,179 ******************************************************************************** 2025-09-08T02:03:37,179 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T02:03:37,179 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2025-09-08T02:03:37,179 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T02:03:37,179 ******************************************************************************** 2025-09-08T02:03:37,180 !! 2025-09-08T02:03:37,180 self._finalize_license_expression() 2025-09-08T02:03:37,255 running egg_info 2025-09-08T02:03:37,331 creating /tmp/pip-pip-egg-info-0rvz832z/bhmm.egg-info 2025-09-08T02:03:37,331 writing /tmp/pip-pip-egg-info-0rvz832z/bhmm.egg-info/PKG-INFO 2025-09-08T02:03:37,332 writing dependency_links to /tmp/pip-pip-egg-info-0rvz832z/bhmm.egg-info/dependency_links.txt 2025-09-08T02:03:37,333 writing requirements to /tmp/pip-pip-egg-info-0rvz832z/bhmm.egg-info/requires.txt 2025-09-08T02:03:37,333 writing top-level names to /tmp/pip-pip-egg-info-0rvz832z/bhmm.egg-info/top_level.txt 2025-09-08T02:03:37,333 writing manifest file '/tmp/pip-pip-egg-info-0rvz832z/bhmm.egg-info/SOURCES.txt' 2025-09-08T02:03:37,568 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,569 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,569 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,569 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,569 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,569 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,569 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,570 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,570 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,570 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,570 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,570 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,570 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,570 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,571 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:03:37,644 reading manifest file '/tmp/pip-pip-egg-info-0rvz832z/bhmm.egg-info/SOURCES.txt' 2025-09-08T02:03:37,644 reading manifest template 'MANIFEST.in' 2025-09-08T02:03:37,659 writing manifest file '/tmp/pip-pip-egg-info-0rvz832z/bhmm.egg-info/SOURCES.txt' 2025-09-08T02:03:38,101 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T02:03:38,106 Source in /tmp/pip-wheel-8iuef58b/bhmm_edc9ef31e37f417ea46af16f34e8936b has version 0.3.0, which satisfies requirement bhmm==0.3.0 from https://files.pythonhosted.org/packages/61/56/3de716dfa04d42acf328f665889a2ac487421543ad38ad44f4e55f8155d6/bhmm-0.3.0.tar.gz 2025-09-08T02:03:38,106 Removed bhmm==0.3.0 from https://files.pythonhosted.org/packages/61/56/3de716dfa04d42acf328f665889a2ac487421543ad38ad44f4e55f8155d6/bhmm-0.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-wh0176ru' 2025-09-08T02:03:38,111 Created temporary directory: /tmp/pip-unpack-0oemy4jy 2025-09-08T02:03:38,111 Created temporary directory: /tmp/pip-unpack-3vb90ifx 2025-09-08T02:03:38,111 Building wheels for collected packages: bhmm 2025-09-08T02:03:38,113 Created temporary directory: /tmp/pip-wheel-d98d2n9b 2025-09-08T02:03:38,113 DEPRECATION: Building 'bhmm' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'bhmm'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T02:03:38,115 Building wheel for bhmm (setup.py): started 2025-09-08T02:03:38,115 Destination directory: /tmp/pip-wheel-d98d2n9b 2025-09-08T02:03:38,115 Running command python setup.py bdist_wheel 2025-09-08T02:03:39,884 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T02:03:39,884 !! 2025-09-08T02:03:39,884 ******************************************************************************** 2025-09-08T02:03:39,884 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T02:03:39,884 License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3) 2025-09-08T02:03:39,885 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T02:03:39,885 ******************************************************************************** 2025-09-08T02:03:39,885 !! 2025-09-08T02:03:39,885 self._finalize_license_expression() 2025-09-08T02:03:39,885 running bdist_wheel 2025-09-08T02:03:40,252 running build 2025-09-08T02:03:40,252 running build_py 2025-09-08T02:03:40,328 creating build/lib.linux-armv7l-cpython-313/bhmm 2025-09-08T02:03:40,328 copying bhmm/version.py -> build/lib.linux-armv7l-cpython-313/bhmm 2025-09-08T02:03:40,329 copying bhmm/api.py -> build/lib.linux-armv7l-cpython-313/bhmm 2025-09-08T02:03:40,329 copying bhmm/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm 2025-09-08T02:03:40,330 creating build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,330 copying bhmm/tests/test_testsystems.py -> build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,331 copying bhmm/tests/test_output_gaussian.py -> build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,331 copying bhmm/tests/test_mlhmm.py -> build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,332 copying bhmm/tests/test_init.py -> build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,332 copying bhmm/tests/test_hmm.py -> build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,333 copying bhmm/tests/test_hidden.py -> build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,333 copying bhmm/tests/test_bhmm.py -> build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,334 copying bhmm/tests/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/tests 2025-09-08T02:03:40,335 creating build/lib.linux-armv7l-cpython-313/bhmm/hmm 2025-09-08T02:03:40,335 copying bhmm/hmm/generic_sampled_hmm.py -> build/lib.linux-armv7l-cpython-313/bhmm/hmm 2025-09-08T02:03:40,335 copying bhmm/hmm/generic_hmm.py -> build/lib.linux-armv7l-cpython-313/bhmm/hmm 2025-09-08T02:03:40,336 copying bhmm/hmm/gaussian_hmm.py -> build/lib.linux-armv7l-cpython-313/bhmm/hmm 2025-09-08T02:03:40,337 copying bhmm/hmm/discrete_hmm.py -> build/lib.linux-armv7l-cpython-313/bhmm/hmm 2025-09-08T02:03:40,337 copying bhmm/hmm/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/hmm 2025-09-08T02:03:40,338 creating build/lib.linux-armv7l-cpython-313/bhmm/estimators 2025-09-08T02:03:40,338 copying bhmm/estimators/maximum_likelihood.py -> build/lib.linux-armv7l-cpython-313/bhmm/estimators 2025-09-08T02:03:40,339 copying bhmm/estimators/bayesian_sampling.py -> build/lib.linux-armv7l-cpython-313/bhmm/estimators 2025-09-08T02:03:40,339 copying bhmm/estimators/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/estimators 2025-09-08T02:03:40,340 creating build/lib.linux-armv7l-cpython-313/bhmm/msm 2025-09-08T02:03:40,340 copying bhmm/msm/transition_matrix_sampling_rev.py -> build/lib.linux-armv7l-cpython-313/bhmm/msm 2025-09-08T02:03:40,341 copying bhmm/msm/tmatrix_disconnected.py -> build/lib.linux-armv7l-cpython-313/bhmm/msm 2025-09-08T02:03:40,341 copying bhmm/msm/linalg.py -> build/lib.linux-armv7l-cpython-313/bhmm/msm 2025-09-08T02:03:40,342 copying bhmm/msm/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/msm 2025-09-08T02:03:40,342 creating build/lib.linux-armv7l-cpython-313/bhmm/hidden 2025-09-08T02:03:40,343 copying bhmm/hidden/api.py -> build/lib.linux-armv7l-cpython-313/bhmm/hidden 2025-09-08T02:03:40,343 copying bhmm/hidden/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/hidden 2025-09-08T02:03:40,344 creating build/lib.linux-armv7l-cpython-313/bhmm/init 2025-09-08T02:03:40,344 copying bhmm/init/gaussian.py -> build/lib.linux-armv7l-cpython-313/bhmm/init 2025-09-08T02:03:40,345 copying bhmm/init/discrete.py -> build/lib.linux-armv7l-cpython-313/bhmm/init 2025-09-08T02:03:40,345 copying bhmm/init/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/init 2025-09-08T02:03:40,347 creating build/lib.linux-armv7l-cpython-313/bhmm/output_models 2025-09-08T02:03:40,347 copying bhmm/output_models/outputmodel.py -> build/lib.linux-armv7l-cpython-313/bhmm/output_models 2025-09-08T02:03:40,348 copying bhmm/output_models/gaussian.py -> build/lib.linux-armv7l-cpython-313/bhmm/output_models 2025-09-08T02:03:40,348 copying bhmm/output_models/discrete.py -> build/lib.linux-armv7l-cpython-313/bhmm/output_models 2025-09-08T02:03:40,349 copying bhmm/output_models/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/output_models 2025-09-08T02:03:40,349 creating build/lib.linux-armv7l-cpython-313/bhmm/output_models/impl_c 2025-09-08T02:03:40,350 copying bhmm/output_models/impl_c/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/output_models/impl_c 2025-09-08T02:03:40,351 creating build/lib.linux-armv7l-cpython-313/bhmm/util 2025-09-08T02:03:40,351 copying bhmm/util/types.py -> build/lib.linux-armv7l-cpython-313/bhmm/util 2025-09-08T02:03:40,351 copying bhmm/util/testsystems.py -> build/lib.linux-armv7l-cpython-313/bhmm/util 2025-09-08T02:03:40,352 copying bhmm/util/statistics.py -> build/lib.linux-armv7l-cpython-313/bhmm/util 2025-09-08T02:03:40,352 copying bhmm/util/logger.py -> build/lib.linux-armv7l-cpython-313/bhmm/util 2025-09-08T02:03:40,353 copying bhmm/util/config.py -> build/lib.linux-armv7l-cpython-313/bhmm/util 2025-09-08T02:03:40,353 copying bhmm/util/analysis.py -> build/lib.linux-armv7l-cpython-313/bhmm/util 2025-09-08T02:03:40,354 copying bhmm/util/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/util 2025-09-08T02:03:40,355 creating build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_python 2025-09-08T02:03:40,355 copying bhmm/hidden/impl_python/hidden.py -> build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_python 2025-09-08T02:03:40,355 copying bhmm/hidden/impl_python/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_python 2025-09-08T02:03:40,356 creating build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_c 2025-09-08T02:03:40,356 copying bhmm/hidden/impl_c/__init__.py -> build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_c 2025-09-08T02:03:40,363 creating build/lib.linux-armv7l-cpython-313/bhmm/../examples 2025-09-08T02:03:40,363 copying bhmm/../examples/plots.py -> build/lib.linux-armv7l-cpython-313/bhmm/../examples 2025-09-08T02:03:40,364 copying bhmm/../examples/README.md -> build/lib.linux-armv7l-cpython-313/bhmm/../examples 2025-09-08T02:03:40,364 creating build/lib.linux-armv7l-cpython-313/bhmm/../examples/synthetic-three-state-model 2025-09-08T02:03:40,365 copying bhmm/../examples/synthetic-three-state-model/synthetic-three-state-model-bhmm-statistics.tex -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/synthetic-three-state-model 2025-09-08T02:03:40,365 copying bhmm/../examples/synthetic-three-state-model/synthetic-example.py -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/synthetic-three-state-model 2025-09-08T02:03:40,366 copying bhmm/../examples/synthetic-three-state-model/generate-figure.py -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/synthetic-three-state-model 2025-09-08T02:03:40,366 copying bhmm/../examples/synthetic-three-state-model/README.md -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/synthetic-three-state-model 2025-09-08T02:03:40,367 creating build/lib.linux-armv7l-cpython-313/bhmm/../examples/rnase-h-d10a 2025-09-08T02:03:40,367 copying bhmm/../examples/rnase-h-d10a/test_mlhmm.py -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/rnase-h-d10a 2025-09-08T02:03:40,368 copying bhmm/../examples/rnase-h-d10a/rnase-h-d10a-trace47.nc -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/rnase-h-d10a 2025-09-08T02:03:40,368 copying bhmm/../examples/rnase-h-d10a/generate-figure.py -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/rnase-h-d10a 2025-09-08T02:03:40,369 copying bhmm/../examples/rnase-h-d10a/README.md -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/rnase-h-d10a 2025-09-08T02:03:40,369 creating build/lib.linux-armv7l-cpython-313/bhmm/../examples/p5ab-hairpin 2025-09-08T02:03:40,370 copying bhmm/../examples/p5ab-hairpin/hairpin-example.py -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/p5ab-hairpin 2025-09-08T02:03:40,370 copying bhmm/../examples/p5ab-hairpin/generate-figure.py -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/p5ab-hairpin 2025-09-08T02:03:40,371 copying bhmm/../examples/p5ab-hairpin/fiber3-trace011.nc -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/p5ab-hairpin 2025-09-08T02:03:40,390 copying bhmm/../examples/p5ab-hairpin/README.md -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/p5ab-hairpin 2025-09-08T02:03:40,391 creating build/lib.linux-armv7l-cpython-313/bhmm/../examples/discrete_1d_2min 2025-09-08T02:03:40,391 copying bhmm/../examples/discrete_1d_2min/run.py -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/discrete_1d_2min 2025-09-08T02:03:40,391 copying bhmm/../examples/discrete_1d_2min/2well_traj_100K.dat -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/discrete_1d_2min 2025-09-08T02:03:40,393 copying bhmm/../examples/discrete_1d_2min/2well_energy.dat -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/discrete_1d_2min 2025-09-08T02:03:40,394 copying bhmm/../examples/discrete_1d_2min/2well_P.dat -> build/lib.linux-armv7l-cpython-313/bhmm/../examples/discrete_1d_2min 2025-09-08T02:03:40,394 creating build/lib.linux-armv7l-cpython-313/bhmm/tests/data 2025-09-08T02:03:40,394 copying bhmm/tests/data/2well_traj_100K.dat -> build/lib.linux-armv7l-cpython-313/bhmm/tests/data 2025-09-08T02:03:40,396 copying bhmm/tests/data/2well_energy.dat -> build/lib.linux-armv7l-cpython-313/bhmm/tests/data 2025-09-08T02:03:40,397 copying bhmm/tests/data/2well_P.dat -> build/lib.linux-armv7l-cpython-313/bhmm/tests/data 2025-09-08T02:03:40,400 running build_ext 2025-09-08T02:03:40,408 building 'bhmm.hidden.impl_c.hidden' extension 2025-09-08T02:03:40,409 creating build/temp.linux-armv7l-cpython-313/bhmm/hidden/impl_c 2025-09-08T02:03:40,409 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I./bhmm/hidden/impl_c -I/bhmm/hidden/impl_c/ -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c ./bhmm/hidden/impl_c/_hidden.c -o build/temp.linux-armv7l-cpython-313/bhmm/hidden/impl_c/_hidden.o 2025-09-08T02:03:40,547 ./bhmm/hidden/impl_c/_hidden.c: In function ‘_compute_viterbi’: 2025-09-08T02:03:40,547 ./bhmm/hidden/impl_c/_hidden.c:207:26: warning: unused variable ‘p’ [-Wunused-variable] 2025-09-08T02:03:40,547 207 | double sum, maxprod, p; 2025-09-08T02:03:40,547 | ^ 2025-09-08T02:03:40,547 ./bhmm/hidden/impl_c/_hidden.c:207:17: warning: unused variable ‘maxprod’ [-Wunused-variable] 2025-09-08T02:03:40,547 207 | double sum, maxprod, p; 2025-09-08T02:03:40,547 | ^~~~~~~ 2025-09-08T02:03:41,138 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I./bhmm/hidden/impl_c -I/bhmm/hidden/impl_c/ -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c ./bhmm/hidden/impl_c/hidden.c -o build/temp.linux-armv7l-cpython-313/bhmm/hidden/impl_c/hidden.o 2025-09-08T02:03:51,619 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/bhmm/hidden/impl_c/_hidden.o build/temp.linux-armv7l-cpython-313/bhmm/hidden/impl_c/hidden.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_c/hidden.cpython-313-arm-linux-gnueabihf.so 2025-09-08T02:03:51,746 building 'bhmm.output_models.impl_c.gaussian' extension 2025-09-08T02:03:51,747 creating build/temp.linux-armv7l-cpython-313/bhmm/output_models/impl_c 2025-09-08T02:03:51,747 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I./bhmm/output_models/impl_c -I/bhmm/output_models/impl_c/ -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c ./bhmm/output_models/impl_c/_gaussian.c -o build/temp.linux-armv7l-cpython-313/bhmm/output_models/impl_c/_gaussian.o 2025-09-08T02:03:51,908 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I./bhmm/output_models/impl_c -I/bhmm/output_models/impl_c/ -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c ./bhmm/output_models/impl_c/gaussian.c -o build/temp.linux-armv7l-cpython-313/bhmm/output_models/impl_c/gaussian.o 2025-09-08T02:04:01,149 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/bhmm/output_models/impl_c/_gaussian.o build/temp.linux-armv7l-cpython-313/bhmm/output_models/impl_c/gaussian.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/bhmm/output_models/impl_c/gaussian.cpython-313-arm-linux-gnueabihf.so 2025-09-08T02:04:01,270 building 'bhmm.msm.tmatrix_sampling' extension 2025-09-08T02:04:01,270 creating build/temp.linux-armv7l-cpython-313/bhmm/msm 2025-09-08T02:04:01,271 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c ./bhmm/msm/tmatrix_sampling.c -o build/temp.linux-armv7l-cpython-313/bhmm/msm/tmatrix_sampling.o 2025-09-08T02:04:12,162 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/bhmm/msm/tmatrix_sampling.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/bhmm/msm/tmatrix_sampling.cpython-313-arm-linux-gnueabihf.so 2025-09-08T02:04:12,360 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-08T02:04:12,360 !! 2025-09-08T02:04:12,361 ******************************************************************************** 2025-09-08T02:04:12,361 Please avoid running ``setup.py`` directly. 2025-09-08T02:04:12,361 Instead, use pypa/build, pypa/installer or other 2025-09-08T02:04:12,361 standards-based tools. 2025-09-08T02:04:12,361 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T02:04:12,361 or your builds will no longer be supported. 2025-09-08T02:04:12,361 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-08T02:04:12,361 ******************************************************************************** 2025-09-08T02:04:12,362 !! 2025-09-08T02:04:12,362 self.initialize_options() 2025-09-08T02:04:12,463 installing to build/bdist.linux-armv7l/wheel 2025-09-08T02:04:12,463 running install 2025-09-08T02:04:12,485 running install_lib 2025-09-08T02:04:12,566 creating build/bdist.linux-armv7l/wheel 2025-09-08T02:04:12,567 creating build/bdist.linux-armv7l/wheel/examples 2025-09-08T02:04:12,568 creating build/bdist.linux-armv7l/wheel/examples/discrete_1d_2min 2025-09-08T02:04:12,568 copying build/lib.linux-armv7l-cpython-313/examples/discrete_1d_2min/2well_P.dat -> build/bdist.linux-armv7l/wheel/./examples/discrete_1d_2min 2025-09-08T02:04:12,569 copying build/lib.linux-armv7l-cpython-313/examples/discrete_1d_2min/2well_energy.dat -> build/bdist.linux-armv7l/wheel/./examples/discrete_1d_2min 2025-09-08T02:04:12,570 copying build/lib.linux-armv7l-cpython-313/examples/discrete_1d_2min/2well_traj_100K.dat -> build/bdist.linux-armv7l/wheel/./examples/discrete_1d_2min 2025-09-08T02:04:12,571 copying build/lib.linux-armv7l-cpython-313/examples/discrete_1d_2min/run.py -> build/bdist.linux-armv7l/wheel/./examples/discrete_1d_2min 2025-09-08T02:04:12,572 creating build/bdist.linux-armv7l/wheel/examples/p5ab-hairpin 2025-09-08T02:04:12,573 copying build/lib.linux-armv7l-cpython-313/examples/p5ab-hairpin/README.md -> build/bdist.linux-armv7l/wheel/./examples/p5ab-hairpin 2025-09-08T02:04:12,573 copying build/lib.linux-armv7l-cpython-313/examples/p5ab-hairpin/fiber3-trace011.nc -> build/bdist.linux-armv7l/wheel/./examples/p5ab-hairpin 2025-09-08T02:04:12,593 copying build/lib.linux-armv7l-cpython-313/examples/p5ab-hairpin/generate-figure.py -> build/bdist.linux-armv7l/wheel/./examples/p5ab-hairpin 2025-09-08T02:04:12,594 copying build/lib.linux-armv7l-cpython-313/examples/p5ab-hairpin/hairpin-example.py -> build/bdist.linux-armv7l/wheel/./examples/p5ab-hairpin 2025-09-08T02:04:12,595 creating build/bdist.linux-armv7l/wheel/examples/rnase-h-d10a 2025-09-08T02:04:12,595 copying build/lib.linux-armv7l-cpython-313/examples/rnase-h-d10a/README.md -> build/bdist.linux-armv7l/wheel/./examples/rnase-h-d10a 2025-09-08T02:04:12,596 copying build/lib.linux-armv7l-cpython-313/examples/rnase-h-d10a/generate-figure.py -> build/bdist.linux-armv7l/wheel/./examples/rnase-h-d10a 2025-09-08T02:04:12,596 copying build/lib.linux-armv7l-cpython-313/examples/rnase-h-d10a/rnase-h-d10a-trace47.nc -> build/bdist.linux-armv7l/wheel/./examples/rnase-h-d10a 2025-09-08T02:04:12,597 copying build/lib.linux-armv7l-cpython-313/examples/rnase-h-d10a/test_mlhmm.py -> build/bdist.linux-armv7l/wheel/./examples/rnase-h-d10a 2025-09-08T02:04:12,598 creating build/bdist.linux-armv7l/wheel/examples/synthetic-three-state-model 2025-09-08T02:04:12,598 copying build/lib.linux-armv7l-cpython-313/examples/synthetic-three-state-model/README.md -> build/bdist.linux-armv7l/wheel/./examples/synthetic-three-state-model 2025-09-08T02:04:12,599 copying build/lib.linux-armv7l-cpython-313/examples/synthetic-three-state-model/generate-figure.py -> build/bdist.linux-armv7l/wheel/./examples/synthetic-three-state-model 2025-09-08T02:04:12,600 copying build/lib.linux-armv7l-cpython-313/examples/synthetic-three-state-model/synthetic-example.py -> build/bdist.linux-armv7l/wheel/./examples/synthetic-three-state-model 2025-09-08T02:04:12,600 copying build/lib.linux-armv7l-cpython-313/examples/synthetic-three-state-model/synthetic-three-state-model-bhmm-statistics.tex -> build/bdist.linux-armv7l/wheel/./examples/synthetic-three-state-model 2025-09-08T02:04:12,601 copying build/lib.linux-armv7l-cpython-313/examples/README.md -> build/bdist.linux-armv7l/wheel/./examples 2025-09-08T02:04:12,601 copying build/lib.linux-armv7l-cpython-313/examples/plots.py -> build/bdist.linux-armv7l/wheel/./examples 2025-09-08T02:04:12,602 creating build/bdist.linux-armv7l/wheel/bhmm 2025-09-08T02:04:12,603 creating build/bdist.linux-armv7l/wheel/bhmm/util 2025-09-08T02:04:12,603 copying build/lib.linux-armv7l-cpython-313/bhmm/util/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/util 2025-09-08T02:04:12,604 copying build/lib.linux-armv7l-cpython-313/bhmm/util/analysis.py -> build/bdist.linux-armv7l/wheel/./bhmm/util 2025-09-08T02:04:12,604 copying build/lib.linux-armv7l-cpython-313/bhmm/util/config.py -> build/bdist.linux-armv7l/wheel/./bhmm/util 2025-09-08T02:04:12,605 copying build/lib.linux-armv7l-cpython-313/bhmm/util/logger.py -> build/bdist.linux-armv7l/wheel/./bhmm/util 2025-09-08T02:04:12,605 copying build/lib.linux-armv7l-cpython-313/bhmm/util/statistics.py -> build/bdist.linux-armv7l/wheel/./bhmm/util 2025-09-08T02:04:12,606 copying build/lib.linux-armv7l-cpython-313/bhmm/util/testsystems.py -> build/bdist.linux-armv7l/wheel/./bhmm/util 2025-09-08T02:04:12,607 copying build/lib.linux-armv7l-cpython-313/bhmm/util/types.py -> build/bdist.linux-armv7l/wheel/./bhmm/util 2025-09-08T02:04:12,607 creating build/bdist.linux-armv7l/wheel/bhmm/output_models 2025-09-08T02:04:12,608 creating build/bdist.linux-armv7l/wheel/bhmm/output_models/impl_c 2025-09-08T02:04:12,609 copying build/lib.linux-armv7l-cpython-313/bhmm/output_models/impl_c/gaussian.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./bhmm/output_models/impl_c 2025-09-08T02:04:12,611 copying build/lib.linux-armv7l-cpython-313/bhmm/output_models/impl_c/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/output_models/impl_c 2025-09-08T02:04:12,612 copying build/lib.linux-armv7l-cpython-313/bhmm/output_models/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/output_models 2025-09-08T02:04:12,612 copying build/lib.linux-armv7l-cpython-313/bhmm/output_models/discrete.py -> build/bdist.linux-armv7l/wheel/./bhmm/output_models 2025-09-08T02:04:12,613 copying build/lib.linux-armv7l-cpython-313/bhmm/output_models/gaussian.py -> build/bdist.linux-armv7l/wheel/./bhmm/output_models 2025-09-08T02:04:12,613 copying build/lib.linux-armv7l-cpython-313/bhmm/output_models/outputmodel.py -> build/bdist.linux-armv7l/wheel/./bhmm/output_models 2025-09-08T02:04:12,614 creating build/bdist.linux-armv7l/wheel/bhmm/init 2025-09-08T02:04:12,615 copying build/lib.linux-armv7l-cpython-313/bhmm/init/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/init 2025-09-08T02:04:12,615 copying build/lib.linux-armv7l-cpython-313/bhmm/init/discrete.py -> build/bdist.linux-armv7l/wheel/./bhmm/init 2025-09-08T02:04:12,616 copying build/lib.linux-armv7l-cpython-313/bhmm/init/gaussian.py -> build/bdist.linux-armv7l/wheel/./bhmm/init 2025-09-08T02:04:12,617 creating build/bdist.linux-armv7l/wheel/bhmm/hidden 2025-09-08T02:04:12,617 creating build/bdist.linux-armv7l/wheel/bhmm/hidden/impl_c 2025-09-08T02:04:12,617 copying build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_c/hidden.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./bhmm/hidden/impl_c 2025-09-08T02:04:12,620 copying build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_c/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/hidden/impl_c 2025-09-08T02:04:12,620 creating build/bdist.linux-armv7l/wheel/bhmm/hidden/impl_python 2025-09-08T02:04:12,621 copying build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_python/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/hidden/impl_python 2025-09-08T02:04:12,621 copying build/lib.linux-armv7l-cpython-313/bhmm/hidden/impl_python/hidden.py -> build/bdist.linux-armv7l/wheel/./bhmm/hidden/impl_python 2025-09-08T02:04:12,621 copying build/lib.linux-armv7l-cpython-313/bhmm/hidden/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/hidden 2025-09-08T02:04:12,622 copying build/lib.linux-armv7l-cpython-313/bhmm/hidden/api.py -> build/bdist.linux-armv7l/wheel/./bhmm/hidden 2025-09-08T02:04:12,622 creating build/bdist.linux-armv7l/wheel/bhmm/msm 2025-09-08T02:04:12,623 copying build/lib.linux-armv7l-cpython-313/bhmm/msm/tmatrix_sampling.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./bhmm/msm 2025-09-08T02:04:12,625 copying build/lib.linux-armv7l-cpython-313/bhmm/msm/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/msm 2025-09-08T02:04:12,625 copying build/lib.linux-armv7l-cpython-313/bhmm/msm/linalg.py -> build/bdist.linux-armv7l/wheel/./bhmm/msm 2025-09-08T02:04:12,626 copying build/lib.linux-armv7l-cpython-313/bhmm/msm/tmatrix_disconnected.py -> build/bdist.linux-armv7l/wheel/./bhmm/msm 2025-09-08T02:04:12,626 copying build/lib.linux-armv7l-cpython-313/bhmm/msm/transition_matrix_sampling_rev.py -> build/bdist.linux-armv7l/wheel/./bhmm/msm 2025-09-08T02:04:12,627 creating build/bdist.linux-armv7l/wheel/bhmm/estimators 2025-09-08T02:04:12,627 copying build/lib.linux-armv7l-cpython-313/bhmm/estimators/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/estimators 2025-09-08T02:04:12,627 copying build/lib.linux-armv7l-cpython-313/bhmm/estimators/bayesian_sampling.py -> build/bdist.linux-armv7l/wheel/./bhmm/estimators 2025-09-08T02:04:12,628 copying build/lib.linux-armv7l-cpython-313/bhmm/estimators/maximum_likelihood.py -> build/bdist.linux-armv7l/wheel/./bhmm/estimators 2025-09-08T02:04:12,628 creating build/bdist.linux-armv7l/wheel/bhmm/hmm 2025-09-08T02:04:12,629 copying build/lib.linux-armv7l-cpython-313/bhmm/hmm/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/hmm 2025-09-08T02:04:12,629 copying build/lib.linux-armv7l-cpython-313/bhmm/hmm/discrete_hmm.py -> build/bdist.linux-armv7l/wheel/./bhmm/hmm 2025-09-08T02:04:12,629 copying build/lib.linux-armv7l-cpython-313/bhmm/hmm/gaussian_hmm.py -> build/bdist.linux-armv7l/wheel/./bhmm/hmm 2025-09-08T02:04:12,630 copying build/lib.linux-armv7l-cpython-313/bhmm/hmm/generic_hmm.py -> build/bdist.linux-armv7l/wheel/./bhmm/hmm 2025-09-08T02:04:12,630 copying build/lib.linux-armv7l-cpython-313/bhmm/hmm/generic_sampled_hmm.py -> build/bdist.linux-armv7l/wheel/./bhmm/hmm 2025-09-08T02:04:12,631 creating build/bdist.linux-armv7l/wheel/bhmm/tests 2025-09-08T02:04:12,631 creating build/bdist.linux-armv7l/wheel/bhmm/tests/data 2025-09-08T02:04:12,631 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/data/2well_P.dat -> build/bdist.linux-armv7l/wheel/./bhmm/tests/data 2025-09-08T02:04:12,632 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/data/2well_energy.dat -> build/bdist.linux-armv7l/wheel/./bhmm/tests/data 2025-09-08T02:04:12,632 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/data/2well_traj_100K.dat -> build/bdist.linux-armv7l/wheel/./bhmm/tests/data 2025-09-08T02:04:12,634 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm/tests 2025-09-08T02:04:12,634 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/test_bhmm.py -> build/bdist.linux-armv7l/wheel/./bhmm/tests 2025-09-08T02:04:12,635 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/test_hidden.py -> build/bdist.linux-armv7l/wheel/./bhmm/tests 2025-09-08T02:04:12,635 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/test_hmm.py -> build/bdist.linux-armv7l/wheel/./bhmm/tests 2025-09-08T02:04:12,635 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/test_init.py -> build/bdist.linux-armv7l/wheel/./bhmm/tests 2025-09-08T02:04:12,636 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/test_mlhmm.py -> build/bdist.linux-armv7l/wheel/./bhmm/tests 2025-09-08T02:04:12,636 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/test_output_gaussian.py -> build/bdist.linux-armv7l/wheel/./bhmm/tests 2025-09-08T02:04:12,636 copying build/lib.linux-armv7l-cpython-313/bhmm/tests/test_testsystems.py -> build/bdist.linux-armv7l/wheel/./bhmm/tests 2025-09-08T02:04:12,637 copying build/lib.linux-armv7l-cpython-313/bhmm/__init__.py -> build/bdist.linux-armv7l/wheel/./bhmm 2025-09-08T02:04:12,637 copying build/lib.linux-armv7l-cpython-313/bhmm/api.py -> build/bdist.linux-armv7l/wheel/./bhmm 2025-09-08T02:04:12,638 copying build/lib.linux-armv7l-cpython-313/bhmm/version.py -> build/bdist.linux-armv7l/wheel/./bhmm 2025-09-08T02:04:12,638 running install_egg_info 2025-09-08T02:04:12,716 running egg_info 2025-09-08T02:04:12,789 writing bhmm.egg-info/PKG-INFO 2025-09-08T02:04:12,790 writing dependency_links to bhmm.egg-info/dependency_links.txt 2025-09-08T02:04:12,791 writing requirements to bhmm.egg-info/requires.txt 2025-09-08T02:04:12,791 writing top-level names to bhmm.egg-info/top_level.txt 2025-09-08T02:04:12,801 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,801 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,802 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,802 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,802 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,802 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,802 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,802 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,803 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,803 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,803 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,803 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,803 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,803 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,803 dependency /usr/local/lib/python3.13/dist-packages/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2025-09-08T02:04:12,875 reading manifest file 'bhmm.egg-info/SOURCES.txt' 2025-09-08T02:04:12,880 reading manifest template 'MANIFEST.in' 2025-09-08T02:04:12,895 writing manifest file 'bhmm.egg-info/SOURCES.txt' 2025-09-08T02:04:12,896 Copying bhmm.egg-info to build/bdist.linux-armv7l/wheel/./bhmm-0.3.0-py3.13.egg-info 2025-09-08T02:04:12,898 running install_scripts 2025-09-08T02:04:12,946 creating build/bdist.linux-armv7l/wheel/bhmm-0.3.0.dist-info/WHEEL 2025-09-08T02:04:12,948 creating '/tmp/pip-wheel-d98d2n9b/bhmm-0.3.0-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-08T02:04:12,949 adding 'bhmm/__init__.py' 2025-09-08T02:04:12,950 adding 'bhmm/api.py' 2025-09-08T02:04:12,951 adding 'bhmm/version.py' 2025-09-08T02:04:12,952 adding 'bhmm/estimators/__init__.py' 2025-09-08T02:04:12,953 adding 'bhmm/estimators/bayesian_sampling.py' 2025-09-08T02:04:12,955 adding 'bhmm/estimators/maximum_likelihood.py' 2025-09-08T02:04:12,956 adding 'bhmm/hidden/__init__.py' 2025-09-08T02:04:12,957 adding 'bhmm/hidden/api.py' 2025-09-08T02:04:12,958 adding 'bhmm/hidden/impl_c/__init__.py' 2025-09-08T02:04:13,066 adding 'bhmm/hidden/impl_c/hidden.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T02:04:13,071 adding 'bhmm/hidden/impl_python/__init__.py' 2025-09-08T02:04:13,072 adding 'bhmm/hidden/impl_python/hidden.py' 2025-09-08T02:04:13,073 adding 'bhmm/hmm/__init__.py' 2025-09-08T02:04:13,073 adding 'bhmm/hmm/discrete_hmm.py' 2025-09-08T02:04:13,074 adding 'bhmm/hmm/gaussian_hmm.py' 2025-09-08T02:04:13,076 adding 'bhmm/hmm/generic_hmm.py' 2025-09-08T02:04:13,077 adding 'bhmm/hmm/generic_sampled_hmm.py' 2025-09-08T02:04:13,078 adding 'bhmm/init/__init__.py' 2025-09-08T02:04:13,079 adding 'bhmm/init/discrete.py' 2025-09-08T02:04:13,079 adding 'bhmm/init/gaussian.py' 2025-09-08T02:04:13,080 adding 'bhmm/msm/__init__.py' 2025-09-08T02:04:13,081 adding 'bhmm/msm/linalg.py' 2025-09-08T02:04:13,082 adding 'bhmm/msm/tmatrix_disconnected.py' 2025-09-08T02:04:13,182 adding 'bhmm/msm/tmatrix_sampling.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T02:04:13,186 adding 'bhmm/msm/transition_matrix_sampling_rev.py' 2025-09-08T02:04:13,187 adding 'bhmm/output_models/__init__.py' 2025-09-08T02:04:13,188 adding 'bhmm/output_models/discrete.py' 2025-09-08T02:04:13,190 adding 'bhmm/output_models/gaussian.py' 2025-09-08T02:04:13,191 adding 'bhmm/output_models/outputmodel.py' 2025-09-08T02:04:13,192 adding 'bhmm/output_models/impl_c/__init__.py' 2025-09-08T02:04:13,288 adding 'bhmm/output_models/impl_c/gaussian.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T02:04:13,292 adding 'bhmm/tests/__init__.py' 2025-09-08T02:04:13,293 adding 'bhmm/tests/test_bhmm.py' 2025-09-08T02:04:13,294 adding 'bhmm/tests/test_hidden.py' 2025-09-08T02:04:13,295 adding 'bhmm/tests/test_hmm.py' 2025-09-08T02:04:13,296 adding 'bhmm/tests/test_init.py' 2025-09-08T02:04:13,297 adding 'bhmm/tests/test_mlhmm.py' 2025-09-08T02:04:13,297 adding 'bhmm/tests/test_output_gaussian.py' 2025-09-08T02:04:13,298 adding 'bhmm/tests/test_testsystems.py' 2025-09-08T02:04:13,299 adding 'bhmm/tests/data/2well_P.dat' 2025-09-08T02:04:13,300 adding 'bhmm/tests/data/2well_energy.dat' 2025-09-08T02:04:13,371 adding 'bhmm/tests/data/2well_traj_100K.dat' 2025-09-08T02:04:13,374 adding 'bhmm/util/__init__.py' 2025-09-08T02:04:13,375 adding 'bhmm/util/analysis.py' 2025-09-08T02:04:13,375 adding 'bhmm/util/config.py' 2025-09-08T02:04:13,376 adding 'bhmm/util/logger.py' 2025-09-08T02:04:13,377 adding 'bhmm/util/statistics.py' 2025-09-08T02:04:13,378 adding 'bhmm/util/testsystems.py' 2025-09-08T02:04:13,379 adding 'bhmm/util/types.py' 2025-09-08T02:04:13,380 adding 'examples/README.md' 2025-09-08T02:04:13,381 adding 'examples/plots.py' 2025-09-08T02:04:13,383 adding 'examples/discrete_1d_2min/2well_P.dat' 2025-09-08T02:04:13,383 adding 'examples/discrete_1d_2min/2well_energy.dat' 2025-09-08T02:04:13,454 adding 'examples/discrete_1d_2min/2well_traj_100K.dat' 2025-09-08T02:04:13,457 adding 'examples/discrete_1d_2min/run.py' 2025-09-08T02:04:13,457 adding 'examples/p5ab-hairpin/README.md' 2025-09-08T02:04:14,120 adding 'examples/p5ab-hairpin/fiber3-trace011.nc' 2025-09-08T02:04:14,154 adding 'examples/p5ab-hairpin/generate-figure.py' 2025-09-08T02:04:14,155 adding 'examples/p5ab-hairpin/hairpin-example.py' 2025-09-08T02:04:14,156 adding 'examples/rnase-h-d10a/README.md' 2025-09-08T02:04:14,156 adding 'examples/rnase-h-d10a/generate-figure.py' 2025-09-08T02:04:14,160 adding 'examples/rnase-h-d10a/rnase-h-d10a-trace47.nc' 2025-09-08T02:04:14,161 adding 'examples/rnase-h-d10a/test_mlhmm.py' 2025-09-08T02:04:14,161 adding 'examples/synthetic-three-state-model/README.md' 2025-09-08T02:04:14,163 adding 'examples/synthetic-three-state-model/generate-figure.py' 2025-09-08T02:04:14,164 adding 'examples/synthetic-three-state-model/synthetic-example.py' 2025-09-08T02:04:14,164 adding 'examples/synthetic-three-state-model/synthetic-three-state-model-bhmm-statistics.tex' 2025-09-08T02:04:14,165 adding 'bhmm-0.3.0.dist-info/METADATA' 2025-09-08T02:04:14,166 adding 'bhmm-0.3.0.dist-info/WHEEL' 2025-09-08T02:04:14,166 adding 'bhmm-0.3.0.dist-info/top_level.txt' 2025-09-08T02:04:14,167 adding 'bhmm-0.3.0.dist-info/RECORD' 2025-09-08T02:04:14,168 removing build/bdist.linux-armv7l/wheel 2025-09-08T02:04:14,344 Building wheel for bhmm (setup.py): finished with status 'done' 2025-09-08T02:04:14,410 Created wheel for bhmm: filename=bhmm-0.3.0-cp313-cp313-linux_armv7l.whl size=6276946 sha256=c5b544334175311a535fa1845976c60b00795e727b89f82ce9b4b75e63ad0734 2025-09-08T02:04:14,411 Stored in directory: /tmp/pip-ephem-wheel-cache-iew30duj/wheels/8a/f5/56/aef5a974857d41402a58c5487085c5b7857f420b1dd5b2a7c7 2025-09-08T02:04:14,420 Successfully built bhmm 2025-09-08T02:04:14,434 Removed build tracker: '/tmp/pip-build-tracker-wh0176ru'