2025-09-08T02:11:59,318 Created temporary directory: /tmp/pip-build-tracker-8kw74kxk 2025-09-08T02:11:59,319 Initialized build tracking at /tmp/pip-build-tracker-8kw74kxk 2025-09-08T02:11:59,319 Created build tracker: /tmp/pip-build-tracker-8kw74kxk 2025-09-08T02:11:59,319 Entered build tracker: /tmp/pip-build-tracker-8kw74kxk 2025-09-08T02:11:59,319 Created temporary directory: /tmp/pip-wheel-jzwytiul 2025-09-08T02:11:59,322 Created temporary directory: /tmp/pip-ephem-wheel-cache-ctba8csk 2025-09-08T02:11:59,379 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T02:11:59,381 2 location(s) to search for versions of libstempo: 2025-09-08T02:11:59,381 * https://pypi.org/simple/libstempo/ 2025-09-08T02:11:59,381 * https://www.piwheels.org/simple/libstempo/ 2025-09-08T02:11:59,381 Fetching project page and analyzing links: https://pypi.org/simple/libstempo/ 2025-09-08T02:11:59,382 Getting page https://pypi.org/simple/libstempo/ 2025-09-08T02:11:59,383 Found index url https://pypi.org/simple/ 2025-09-08T02:11:59,452 Fetched page https://pypi.org/simple/libstempo/ as application/vnd.pypi.simple.v1+json 2025-09-08T02:11:59,456 Found link https://files.pythonhosted.org/packages/b3/43/fec1ea1d0d8e2580937a80fc1a3f08b856a008db7af7fd2c3a9c9bc37d1f/libstempo-1.0.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.0 2025-09-08T02:11:59,457 Found link https://files.pythonhosted.org/packages/86/d5/096a9284b050d1c28f5313dcb2a560a73988f9e3a8422ae187755d086656/libstempo-1.0.1.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.0.1 2025-09-08T02:11:59,457 Found link https://files.pythonhosted.org/packages/e1/ca/2cbd2fbd19403c559b5f8ad2a3dca24c41c8813f2a704881c05b4583f00b/libstempo-1.0.2.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.0.2 2025-09-08T02:11:59,457 Found link https://files.pythonhosted.org/packages/50/4b/1b1e549ddb800328963b6ac1c10ef1af305300a2c75b6e7e13ea27690cbb/libstempo-1.0.3.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.0.3 2025-09-08T02:11:59,457 Found link https://files.pythonhosted.org/packages/27/68/f7b59be5fc707efcba79890af4783b78b4d1351b78811592417a1b84a055/libstempo-1.0.4.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.0.4 2025-09-08T02:11:59,457 Found link https://files.pythonhosted.org/packages/22/8e/bf4d10cc8303dbe7c2099e1a29e6c2f5749243d5794e028833fdc8942d16/libstempo-1.1.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.1 2025-09-08T02:11:59,458 Found link https://files.pythonhosted.org/packages/5f/91/1a3d82b8fcfb09f1928b4604e9969bd3327773372b3186013cff93003485/libstempo-1.1.1.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.1.1 2025-09-08T02:11:59,458 Found link https://files.pythonhosted.org/packages/0e/11/8cca68e3ef5083fb82cc20ee866c37da01306e9f262b977879082861ebbd/libstempo-1.1.2.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.1.2 2025-09-08T02:11:59,458 Found link https://files.pythonhosted.org/packages/6b/2b/56362bf80d644f7954eadb43c49880e216315276ba32be0f09d4026084df/libstempo-1.2.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2 2025-09-08T02:11:59,458 Found link https://files.pythonhosted.org/packages/09/36/a7270e097b213e643bfad6f38882ec01f522ab2a40e363992cbb1c8630a3/libstempo-1.2.1.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.1 2025-09-08T02:11:59,458 Found link https://files.pythonhosted.org/packages/72/3b/c497176e066f71381955ed08bdd6c97a70a0bdd7b67e9091cca07e45a422/libstempo-1.2.2.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.2 2025-09-08T02:11:59,459 Found link https://files.pythonhosted.org/packages/91/e0/70fd157db2ee559cca691351e461638a08ae8effd890bc9813bfe221db81/libstempo-1.2.3.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.3 2025-09-08T02:11:59,459 Found link https://files.pythonhosted.org/packages/4b/2f/770bf6a51970baa43e22338b227bbdbdc2513cd022da793ebe49d9a5ddda/libstempo-1.2.4.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.4 2025-09-08T02:11:59,459 Found link https://files.pythonhosted.org/packages/12/ce/a36e6ec72bc204a9e92380564fa79d071088c73c901c138a5a81dabd0a05/libstempo-1.2.5.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.5 2025-09-08T02:11:59,459 Found link https://files.pythonhosted.org/packages/e3/7b/9c009e6894f25a73c9bed69227c26b522195e18b216d79b3386d59c816b8/libstempo-1.2.6.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.6 2025-09-08T02:11:59,460 Found link https://files.pythonhosted.org/packages/03/7b/a452354dc39c95d18f26d6226dab8f23e02e4cc40e7c0f452dbc45c9a23b/libstempo-1.2.7.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.7 2025-09-08T02:11:59,460 Found link https://files.pythonhosted.org/packages/4b/31/11076ea4d40b8140682fecdc60745081a93f9503ea1b8cf5b6198fd08278/libstempo-1.2.8.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.8 2025-09-08T02:11:59,460 Found link https://files.pythonhosted.org/packages/ee/f1/09dcce6624a892de5f79f6aac2480e9f30266a556fd1ce6c8415d160bc65/libstempo-1.2.9.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.9 2025-09-08T02:11:59,460 Found link https://files.pythonhosted.org/packages/57/72/ca7aa6bfad4e22181fefd8b6376f877744f04679d17dee8c071082d019e0/libstempo-1.2.10.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.2.10 2025-09-08T02:11:59,460 Found link https://files.pythonhosted.org/packages/39/5d/178fad894d2864cd2b66949c6bcf52da9c0a02861bbf57cbca78b1132bdf/libstempo-1.3.1.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.3.1 2025-09-08T02:11:59,460 Found link https://files.pythonhosted.org/packages/de/01/54c3bcf135acf6e74f435c0aa7c1ba7283e9f412741cdf84c6336b2f6409/libstempo-1.3.2.tar.gz (from https://pypi.org/simple/libstempo/), version: 1.3.2 2025-09-08T02:11:59,461 Found link https://files.pythonhosted.org/packages/eb/82/0a12f65dfd37cce33675b00dc061efb7decd88c9426872ad08e0472ef2e4/libstempo-2.2.0.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.2.0 2025-09-08T02:11:59,461 Found link https://files.pythonhosted.org/packages/4c/71/09d5e95dae879a4c873163ed915a63e7f60b18153050b10c53900cb750d2/libstempo-2.2.1.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.2.1 2025-09-08T02:11:59,461 Found link https://files.pythonhosted.org/packages/c7/38/fc0d5c301e8c726bb9b9d4470620973ed21b634d1a41100af770685321e6/libstempo-2.2.2.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.2.2 2025-09-08T02:11:59,461 Found link https://files.pythonhosted.org/packages/ce/f8/8ba0228ccfef2cb4058ddd4438506bbe64b08a1129274c8a0ed71bbb5d05/libstempo-2.2.3.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.2.3 2025-09-08T02:11:59,462 Found link https://files.pythonhosted.org/packages/8f/8b/81920769101d249177edf2f70756c2da399ff7be654ab313305c58d6a501/libstempo-2.2.4.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.2.4 2025-09-08T02:11:59,462 Found link https://files.pythonhosted.org/packages/c0/6d/66103b0a9ffd67ad3002f96c0c1f89185e20ae5c3743388919cd88dd3789/libstempo-2.2.5.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.2.5 2025-09-08T02:11:59,462 Found link https://files.pythonhosted.org/packages/f3/93/9112d2319183274cefadab02ff1fb7959d88eb4f4fa9084eb55098433b0c/libstempo-2.3.1.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.3.1 2025-09-08T02:11:59,462 Found link https://files.pythonhosted.org/packages/14/05/b5b77fb8b82098e5bff92ca29e9f8493602f26ac576771f4447865c9f039/libstempo-2.3.2.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.3.2 2025-09-08T02:11:59,462 Found link https://files.pythonhosted.org/packages/99/57/84dd79186e94f58769d40f668619129aefa0b62e6ab2099281b51738ed01/libstempo-2.3.3.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.3.3 2025-09-08T02:11:59,463 Found link https://files.pythonhosted.org/packages/dc/a2/b8db2b20cc734c38a499d67b516cb8d85f07b5d43a6a9b0206b6fc41f3f8/libstempo-2.3.4.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.3.4 2025-09-08T02:11:59,463 Found link https://files.pythonhosted.org/packages/79/4d/8cd2255bf3db43ab028b58b9a01876e6d4580ba32290795149622852b5dd/libstempo-2.3.5.tar.gz (from https://pypi.org/simple/libstempo/), version: 2.3.5 2025-09-08T02:11:59,464 Found link https://files.pythonhosted.org/packages/72/77/eb138d5149b31c1fbed766857de6fce08df5dced3d55320a2339c9d7e1e4/libstempo-2.4.0.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:>=3.6), version: 2.4.0 2025-09-08T02:11:59,464 Found link https://files.pythonhosted.org/packages/51/10/524a5408c7870c1dbe5c567d73085d6d2e57bb7ac6405b1c188ab18f3c18/libstempo-2.4.1.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:>=3.6), version: 2.4.1 2025-09-08T02:11:59,464 Found link https://files.pythonhosted.org/packages/7b/e8/53564c6c5a9344b0f50cff4e828f8993d6a08aa74ddec5cfd55cc7bd6e92/libstempo-2.4.2.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:>=3.6), version: 2.4.2 2025-09-08T02:11:59,464 Found link https://files.pythonhosted.org/packages/00/4c/ac9e0edc9b90909eca6f970d2b2cd3ba838802edf03dd7522f5c65ad499a/libstempo-2.4.3.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:>=3.6), version: 2.4.3 2025-09-08T02:11:59,464 Found link https://files.pythonhosted.org/packages/22/62/8f01a1bda561da988dd076cfbbf1b5798823c48a3f6b3e9d7f2ad6b0f3fa/libstempo-2.4.4.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:>=3.6), version: 2.4.4 2025-09-08T02:11:59,465 Found link https://files.pythonhosted.org/packages/3b/10/cbf8af65e958894e03517f4bf3ae67b1e6738809c86101b35d421b38a5e0/libstempo-2.4.5.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:>=3.7), version: 2.4.5 2025-09-08T02:11:59,465 Found link https://files.pythonhosted.org/packages/09/2e/b1f255e3a09376090cbba04fceb5f489f4ea2b8761da1cef519de3215736/libstempo-2.4.6.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:>=3.7), version: 2.4.6 2025-09-08T02:11:59,465 Found link https://files.pythonhosted.org/packages/ab/b5/4a4bc8a50e2fe7402686f3a325a5b061e373cf74994e3d784f004f5cd06f/libstempo-2.4.7.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:>=3.7), version: 2.4.7 2025-09-08T02:11:59,466 Found link https://files.pythonhosted.org/packages/b6/94/b1b9e5df5eb0c6a73151147b6fa75b01425c9233889ce4a6fd3e27dccfb2/libstempo-2.5.0.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:<4,>=3.8), version: 2.5.0 2025-09-08T02:11:59,466 Found link https://files.pythonhosted.org/packages/40/b4/e890d7d0f5c072f95fa7b36b9a66eaf00c59b7be6a0b1eea3f529cd14042/libstempo-2.5.1.tar.gz (from https://pypi.org/simple/libstempo/) (requires-python:<4,>=3.8), version: 2.5.1 2025-09-08T02:11:59,467 Fetching project page and analyzing links: https://www.piwheels.org/simple/libstempo/ 2025-09-08T02:11:59,467 Getting page https://www.piwheels.org/simple/libstempo/ 2025-09-08T02:11:59,468 Found index url https://www.piwheels.org/simple/ 2025-09-08T02:11:59,563 Fetched page https://www.piwheels.org/simple/libstempo/ as text/html 2025-09-08T02:11:59,564 Skipping link: not a file: https://www.piwheels.org/simple/libstempo/ 2025-09-08T02:11:59,564 Skipping link: not a file: https://pypi.org/simple/libstempo/ 2025-09-08T02:11:59,593 Given no hashes to check 1 links for project 'libstempo': discarding no candidates 2025-09-08T02:11:59,594 Collecting libstempo==2.2.4 2025-09-08T02:11:59,596 Created temporary directory: /tmp/pip-unpack-3vbyeig0 2025-09-08T02:11:59,738 Downloading libstempo-2.2.4.tar.gz (648 kB) 2025-09-08T02:11:59,884 Added libstempo==2.2.4 from https://files.pythonhosted.org/packages/8f/8b/81920769101d249177edf2f70756c2da399ff7be654ab313305c58d6a501/libstempo-2.2.4.tar.gz to build tracker '/tmp/pip-build-tracker-8kw74kxk' 2025-09-08T02:11:59,885 Running setup.py (path:/tmp/pip-wheel-jzwytiul/libstempo_c78a58f6ed8d453f8e93fddb2581884b/setup.py) egg_info for package libstempo 2025-09-08T02:11:59,885 Created temporary directory: /tmp/pip-pip-egg-info-xe7bbaft 2025-09-08T02:11:59,886 Preparing metadata (setup.py): started 2025-09-08T02:11:59,886 Running command python setup.py egg_info 2025-09-08T02:12:03,395 Error compiling Cython file: 2025-09-08T02:12:03,395 ------------------------------------------------------------ 2025-09-08T02:12:03,395 ... 2025-09-08T02:12:03,395 def tempo2version(): 2025-09-08T02:12:03,395 return StrictVersion(string(TEMPO2_VERSION).split()[1]) 2025-09-08T02:12:03,396 cdef class tempopulsar: 2025-09-08T02:12:03,396 cpdef public object parfile 2025-09-08T02:12:03,396 ^ 2025-09-08T02:12:03,396 ------------------------------------------------------------ 2025-09-08T02:12:03,396 libstempo/libstempo.pyx:470:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,396 Error compiling Cython file: 2025-09-08T02:12:03,396 ------------------------------------------------------------ 2025-09-08T02:12:03,396 ... 2025-09-08T02:12:03,397 def tempo2version(): 2025-09-08T02:12:03,397 return StrictVersion(string(TEMPO2_VERSION).split()[1]) 2025-09-08T02:12:03,397 cdef class tempopulsar: 2025-09-08T02:12:03,397 cpdef public object parfile 2025-09-08T02:12:03,397 cpdef public object timfile 2025-09-08T02:12:03,397 ^ 2025-09-08T02:12:03,397 ------------------------------------------------------------ 2025-09-08T02:12:03,397 libstempo/libstempo.pyx:471:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,398 Error compiling Cython file: 2025-09-08T02:12:03,398 ------------------------------------------------------------ 2025-09-08T02:12:03,398 ... 2025-09-08T02:12:03,398 cdef class tempopulsar: 2025-09-08T02:12:03,398 cpdef public object parfile 2025-09-08T02:12:03,398 cpdef public object timfile 2025-09-08T02:12:03,398 cpdef public object units 2025-09-08T02:12:03,398 ^ 2025-09-08T02:12:03,398 ------------------------------------------------------------ 2025-09-08T02:12:03,399 libstempo/libstempo.pyx:473:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,399 Error compiling Cython file: 2025-09-08T02:12:03,399 ------------------------------------------------------------ 2025-09-08T02:12:03,399 ... 2025-09-08T02:12:03,399 cpdef public object units 2025-09-08T02:12:03,399 cdef int npsr # number of pulsars 2025-09-08T02:12:03,399 cdef pulsar *psr # array of pulsar structures 2025-09-08T02:12:03,399 cpdef object pardict # dictionary of parameter proxies 2025-09-08T02:12:03,400 ^ 2025-09-08T02:12:03,400 ------------------------------------------------------------ 2025-09-08T02:12:03,400 libstempo/libstempo.pyx:478:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,400 Error compiling Cython file: 2025-09-08T02:12:03,400 ------------------------------------------------------------ 2025-09-08T02:12:03,400 ... 2025-09-08T02:12:03,400 cdef int npsr # number of pulsars 2025-09-08T02:12:03,400 cdef pulsar *psr # array of pulsar structures 2025-09-08T02:12:03,401 cpdef object pardict # dictionary of parameter proxies 2025-09-08T02:12:03,401 cpdef int nobs_ # number of observations 2025-09-08T02:12:03,401 ^ 2025-09-08T02:12:03,401 ------------------------------------------------------------ 2025-09-08T02:12:03,401 libstempo/libstempo.pyx:480:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,401 Error compiling Cython file: 2025-09-08T02:12:03,401 ------------------------------------------------------------ 2025-09-08T02:12:03,401 ... 2025-09-08T02:12:03,402 cpdef object pardict # dictionary of parameter proxies 2025-09-08T02:12:03,402 cpdef int nobs_ # number of observations 2025-09-08T02:12:03,402 cpdef object flagnames_ # a list of all flags that have values 2025-09-08T02:12:03,402 ^ 2025-09-08T02:12:03,402 ------------------------------------------------------------ 2025-09-08T02:12:03,402 libstempo/libstempo.pyx:482:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,402 Error compiling Cython file: 2025-09-08T02:12:03,403 ------------------------------------------------------------ 2025-09-08T02:12:03,403 ... 2025-09-08T02:12:03,403 cpdef object pardict # dictionary of parameter proxies 2025-09-08T02:12:03,403 cpdef int nobs_ # number of observations 2025-09-08T02:12:03,403 cpdef object flagnames_ # a list of all flags that have values 2025-09-08T02:12:03,403 cpdef object flags_ # a dictionary of numpy arrays with flag values 2025-09-08T02:12:03,403 ^ 2025-09-08T02:12:03,403 ------------------------------------------------------------ 2025-09-08T02:12:03,403 libstempo/libstempo.pyx:483:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,404 Error compiling Cython file: 2025-09-08T02:12:03,404 ------------------------------------------------------------ 2025-09-08T02:12:03,404 ... 2025-09-08T02:12:03,404 cpdef int nobs_ # number of observations 2025-09-08T02:12:03,404 cpdef object flagnames_ # a list of all flags that have values 2025-09-08T02:12:03,404 cpdef object flags_ # a dictionary of numpy arrays with flag values 2025-09-08T02:12:03,404 cpdef public double fitchisq # chisq after tempo2 fit 2025-09-08T02:12:03,405 ^ 2025-09-08T02:12:03,405 ------------------------------------------------------------ 2025-09-08T02:12:03,405 libstempo/libstempo.pyx:485:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,405 Error compiling Cython file: 2025-09-08T02:12:03,405 ------------------------------------------------------------ 2025-09-08T02:12:03,405 ... 2025-09-08T02:12:03,405 cpdef object flagnames_ # a list of all flags that have values 2025-09-08T02:12:03,405 cpdef object flags_ # a dictionary of numpy arrays with flag values 2025-09-08T02:12:03,406 cpdef public double fitchisq # chisq after tempo2 fit 2025-09-08T02:12:03,406 cpdef public double fitrms # rms residuals after tempo2 fit 2025-09-08T02:12:03,406 ^ 2025-09-08T02:12:03,406 ------------------------------------------------------------ 2025-09-08T02:12:03,406 libstempo/libstempo.pyx:486:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,406 Error compiling Cython file: 2025-09-08T02:12:03,406 ------------------------------------------------------------ 2025-09-08T02:12:03,406 ... 2025-09-08T02:12:03,406 cpdef public double fitchisq # chisq after tempo2 fit 2025-09-08T02:12:03,407 cpdef public double fitrms # rms residuals after tempo2 fit 2025-09-08T02:12:03,407 # TO DO: is cpdef required here? 2025-09-08T02:12:03,407 cpdef jumpval, jumperr 2025-09-08T02:12:03,407 ^ 2025-09-08T02:12:03,407 ------------------------------------------------------------ 2025-09-08T02:12:03,407 libstempo/libstempo.pyx:489:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:03,407 Error compiling Cython file: 2025-09-08T02:12:03,407 ------------------------------------------------------------ 2025-09-08T02:12:03,408 ... 2025-09-08T02:12:03,408 cpdef public double fitchisq # chisq after tempo2 fit 2025-09-08T02:12:03,408 cpdef public double fitrms # rms residuals after tempo2 fit 2025-09-08T02:12:03,408 # TO DO: is cpdef required here? 2025-09-08T02:12:03,408 cpdef jumpval, jumperr 2025-09-08T02:12:03,408 ^ 2025-09-08T02:12:03,408 ------------------------------------------------------------ 2025-09-08T02:12:03,408 libstempo/libstempo.pyx:489:4: Variables cannot be declared with 'cpdef'. Use 'cdef' instead. 2025-09-08T02:12:05,078 Traceback (most recent call last): 2025-09-08T02:12:05,081 File "", line 2, in 2025-09-08T02:12:05,081 exec(compile(''' 2025-09-08T02:12:05,081 ~~~~^^^^^^^^^^^^ 2025-09-08T02:12:05,081 # This is -- a caller that pip uses to run setup.py 2025-09-08T02:12:05,081 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,081 ...<32 lines>... 2025-09-08T02:12:05,081 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T02:12:05,082 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,082 ''' % ('/tmp/pip-wheel-jzwytiul/libstempo_c78a58f6ed8d453f8e93fddb2581884b/setup.py',), "", "exec")) 2025-09-08T02:12:05,082 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,082 File "", line 35, in 2025-09-08T02:12:05,082 File "/tmp/pip-wheel-jzwytiul/libstempo_c78a58f6ed8d453f8e93fddb2581884b/setup.py", line 80, in 2025-09-08T02:12:05,082 ext_modules = cythonize(Extension('libstempo.libstempo',['libstempo/libstempo.pyx'], 2025-09-08T02:12:05,082 language="c++", 2025-09-08T02:12:05,082 include_dirs = [tempo2 + '/include',numpy.get_include()], 2025-09-08T02:12:05,083 libraries = ['tempo2'], 2025-09-08T02:12:05,083 library_dirs = [tempo2 + '/lib'])) 2025-09-08T02:12:05,083 File "/usr/local/lib/python3.13/dist-packages/Cython/Build/Dependencies.py", line 1154, in cythonize 2025-09-08T02:12:05,083 cythonize_one(*args) 2025-09-08T02:12:05,083 ~~~~~~~~~~~~~^^^^^^^ 2025-09-08T02:12:05,083 File "/usr/local/lib/python3.13/dist-packages/Cython/Build/Dependencies.py", line 1298, in cythonize_one 2025-09-08T02:12:05,083 raise CompileError(None, pyx_file) 2025-09-08T02:12:05,083 Cython.Compiler.Errors.CompileError: libstempo/libstempo.pyx 2025-09-08T02:12:05,083 WARNING: The libstempo API has changed substantially (for the better) from 2025-09-08T02:12:05,084 versions 1.X to 2.X. If you need the older 1.X API, you can get an older libstempo 2025-09-08T02:12:05,084 from https://pypi.python.org/simple/libstempo, or checkout the libstempo1 2025-09-08T02:12:05,084 branch on GitHub - https://github.com/vallis/libstempo/tree/libstempo1 2025-09-08T02:12:05,084 I have not been able to autodetect the location of the tempo2 headers and 2025-09-08T02:12:05,084 libraries. Nevertheless, I will proceed with the installation. If you get 2025-09-08T02:12:05,084 errors, please run setup.py again, but use the option --with-tempo2=... 2025-09-08T02:12:05,084 to point me to the tempo2 install root (e.g., /usr/local if tempo2.h is 2025-09-08T02:12:05,084 in /usr/local/include). 2025-09-08T02:12:05,085 Compiling libstempo/libstempo.pyx because it changed. 2025-09-08T02:12:05,085 [1/1] Cythonizing libstempo/libstempo.pyx 2025-09-08T02:12:05,678 ERROR: python setup.py egg_info exited with 1 2025-09-08T02:12:05,690 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T02:12:05,690 exec(compile('"'"''"'"''"'"' 2025-09-08T02:12:05,690 # This is -- a caller that pip uses to run setup.py 2025-09-08T02:12:05,690 # 2025-09-08T02:12:05,690 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T02:12:05,690 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T02:12:05,690 # - It provides a clear error message when setuptools is not installed. 2025-09-08T02:12:05,690 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T02:12:05,690 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T02:12:05,690 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T02:12:05,690 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T02:12:05,690 import os, sys, tokenize, traceback 2025-09-08T02:12:05,690 2025-09-08T02:12:05,690 try: 2025-09-08T02:12:05,690 import setuptools 2025-09-08T02:12:05,690 except ImportError: 2025-09-08T02:12:05,690 print( 2025-09-08T02:12:05,690 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T02:12:05,690 "the build environment with exception:", 2025-09-08T02:12:05,690 file=sys.stderr, 2025-09-08T02:12:05,690 ) 2025-09-08T02:12:05,690 traceback.print_exc() 2025-09-08T02:12:05,690 sys.exit(1) 2025-09-08T02:12:05,690 2025-09-08T02:12:05,690 __file__ = %r 2025-09-08T02:12:05,690 sys.argv[0] = __file__ 2025-09-08T02:12:05,690 2025-09-08T02:12:05,690 if os.path.exists(__file__): 2025-09-08T02:12:05,690 filename = __file__ 2025-09-08T02:12:05,690 with tokenize.open(__file__) as f: 2025-09-08T02:12:05,690 setup_py_code = f.read() 2025-09-08T02:12:05,690 else: 2025-09-08T02:12:05,690 filename = "" 2025-09-08T02:12:05,690 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T02:12:05,690 2025-09-08T02:12:05,690 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T02:12:05,690 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-jzwytiul/libstempo_c78a58f6ed8d453f8e93fddb2581884b/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-xe7bbaft[/] 2025-09-08T02:12:05,690 [bold magenta]cwd[/]: /tmp/pip-wheel-jzwytiul/libstempo_c78a58f6ed8d453f8e93fddb2581884b/ 2025-09-08T02:12:05,690 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T02:12:05,691 ERROR: metadata generation failed 2025-09-08T02:12:05,696 Exception information: 2025-09-08T02:12:05,696 Traceback (most recent call last): 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T02:12:05,696 call_subprocess( 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~^ 2025-09-08T02:12:05,696 args, 2025-09-08T02:12:05,696 ^^^^^ 2025-09-08T02:12:05,696 ...<2 lines>... 2025-09-08T02:12:05,696 spinner=spinner, 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 ) 2025-09-08T02:12:05,696 ^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T02:12:05,696 raise error 2025-09-08T02:12:05,696 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T02:12:05,696 2025-09-08T02:12:05,696 The above exception was the direct cause of the following exception: 2025-09-08T02:12:05,696 2025-09-08T02:12:05,696 Traceback (most recent call last): 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T02:12:05,696 status = _inner_run() 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T02:12:05,696 return self.run(options, args) 2025-09-08T02:12:05,696 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T02:12:05,696 return func(self, options, args) 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T02:12:05,696 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T02:12:05,696 result = self._result = resolver.resolve( 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~^ 2025-09-08T02:12:05,696 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 ) 2025-09-08T02:12:05,696 ^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T02:12:05,696 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T02:12:05,696 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T02:12:05,696 if not criterion.candidates: 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T02:12:05,696 return bool(self._sequence) 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T02:12:05,696 self._bool = any(self) 2025-09-08T02:12:05,696 ~~~^^^^^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T02:12:05,696 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T02:12:05,696 ^^^^^^^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T02:12:05,696 candidate = func() 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T02:12:05,696 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T02:12:05,696 link, template, name, version 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 ) 2025-09-08T02:12:05,696 ^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T02:12:05,696 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~^ 2025-09-08T02:12:05,696 link, 2025-09-08T02:12:05,696 ^^^^^ 2025-09-08T02:12:05,696 ...<3 lines>... 2025-09-08T02:12:05,696 version=version, 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 ) 2025-09-08T02:12:05,696 ^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T02:12:05,696 super().__init__( 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~^ 2025-09-08T02:12:05,696 link=link, 2025-09-08T02:12:05,696 ^^^^^^^^^^ 2025-09-08T02:12:05,696 ...<4 lines>... 2025-09-08T02:12:05,696 version=version, 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 ) 2025-09-08T02:12:05,696 ^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T02:12:05,696 self.dist = self._prepare() 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T02:12:05,696 dist = self._prepare_distribution() 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T02:12:05,696 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T02:12:05,696 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T02:12:05,696 dist = _get_prepared_distribution( 2025-09-08T02:12:05,696 req, 2025-09-08T02:12:05,696 ...<3 lines>... 2025-09-08T02:12:05,696 self.check_build_deps, 2025-09-08T02:12:05,696 ) 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T02:12:05,696 abstract_dist.prepare_distribution_metadata( 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T02:12:05,696 finder, build_isolation, check_build_deps 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 ) 2025-09-08T02:12:05,696 ^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T02:12:05,696 self.req.prepare_metadata() 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T02:12:05,696 self.metadata_directory = generate_metadata_legacy( 2025-09-08T02:12:05,696 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T02:12:05,696 build_env=self.build_env, 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 ...<3 lines>... 2025-09-08T02:12:05,696 details=details, 2025-09-08T02:12:05,696 ^^^^^^^^^^^^^^^^ 2025-09-08T02:12:05,696 ) 2025-09-08T02:12:05,696 ^ 2025-09-08T02:12:05,696 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T02:12:05,696 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T02:12:05,696 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T02:12:05,720 Removed libstempo==2.2.4 from https://files.pythonhosted.org/packages/8f/8b/81920769101d249177edf2f70756c2da399ff7be654ab313305c58d6a501/libstempo-2.2.4.tar.gz from build tracker '/tmp/pip-build-tracker-8kw74kxk' 2025-09-08T02:12:05,720 Removed build tracker: '/tmp/pip-build-tracker-8kw74kxk'