2025-09-08T03:06:41,207 Created temporary directory: /tmp/pip-build-tracker-u0s3o5w2 2025-09-08T03:06:41,208 Initialized build tracking at /tmp/pip-build-tracker-u0s3o5w2 2025-09-08T03:06:41,208 Created build tracker: /tmp/pip-build-tracker-u0s3o5w2 2025-09-08T03:06:41,209 Entered build tracker: /tmp/pip-build-tracker-u0s3o5w2 2025-09-08T03:06:41,209 Created temporary directory: /tmp/pip-wheel-m8m_brlt 2025-09-08T03:06:41,212 Created temporary directory: /tmp/pip-ephem-wheel-cache-xn7gdm7l 2025-09-08T03:06:41,271 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T03:06:41,273 2 location(s) to search for versions of affinegap: 2025-09-08T03:06:41,273 * https://pypi.org/simple/affinegap/ 2025-09-08T03:06:41,273 * https://www.piwheels.org/simple/affinegap/ 2025-09-08T03:06:41,274 Fetching project page and analyzing links: https://pypi.org/simple/affinegap/ 2025-09-08T03:06:41,274 Getting page https://pypi.org/simple/affinegap/ 2025-09-08T03:06:41,276 Found index url https://pypi.org/simple/ 2025-09-08T03:06:41,352 Fetched page https://pypi.org/simple/affinegap/ as application/vnd.pypi.simple.v1+json 2025-09-08T03:06:41,369 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/91/97/60f37029b20b9e6ec6d88cb420d47658cdb661d90fa3424ab572a1f598e6/affinegap-1.0-py2.7-linux-x86_64.egg (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,369 Found link https://files.pythonhosted.org/packages/3b/f0/041bde4e1218489a3f22d6e88e61363c8cb11cd1b01584ba0c78dadf2c0e/affinegap-1.0.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.0 2025-09-08T03:06:41,370 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/9d/e2/d13e00e167f629c0dcc1d0b06b4fe0633efee58223f023c9b5ab358f68a8/affinegap-1.1-py2.7-linux-x86_64.egg (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,370 Found link https://files.pythonhosted.org/packages/b8/c9/46778698b7b3b402788ed1dab9fa18c8d33d30c4b3e50e44c734d0742f11/affinegap-1.1.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.1 2025-09-08T03:06:41,370 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/a0/5b/a7ec60976902cb7b14fb4d2233be864aec847f7801e639392a22a1e1638f/affinegap-1.2-py2.7-linux-x86_64.egg (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,370 Found link https://files.pythonhosted.org/packages/aa/3a/0d7295798e581322e8f25aa8f6dd634ef69f978f512dc946d43f28e6f1e4/affinegap-1.2.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.2 2025-09-08T03:06:41,371 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/25/2a/be1a6fec1c11fb5ad0d288ff87ee94985e07c23dc0251913a95af63a8df6/affinegap-1.3-py2.7-linux-x86_64.egg (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,371 Found link https://files.pythonhosted.org/packages/12/e7/8415f7b8d5bc24b612a6bc55f2ff7c250b932fdb57a46ccb89a373af0735/affinegap-1.3.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.3 2025-09-08T03:06:41,371 Found link https://files.pythonhosted.org/packages/a8/74/aa32690272798769d0e70ef72d6b83d5223faeefaf38e7ff660560c5ec60/affinegap-1.4.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.4 2025-09-08T03:06:41,372 Found link https://files.pythonhosted.org/packages/f9/ba/8d91e39674b4774bc7d2bc1afa2e755ae7bbefaaa934b99d1a6b17d644e3/affinegap-1.5.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.5 2025-09-08T03:06:41,372 Found link https://files.pythonhosted.org/packages/2e/52/fb93fecb66fbb03814c7532fc74d1c3adeee9c36530f5480ce69d622510b/affinegap-1.6.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.6 2025-09-08T03:06:41,372 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ac/f3/5556ff8c37706fb02b70293ff291811dd97b69c75ae87b689690d6b3fe34/affinegap-1.7-py2.7-linux-x86_64.egg (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,372 Found link https://files.pythonhosted.org/packages/38/06/6d99c060a1ec745db7ba68db319f0fd8150ba1376dace9d193c4c9e49d71/affinegap-1.7.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.7 2025-09-08T03:06:41,373 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/fd/b4/4563e62d430ecda4fcbdd1d78ba83606ff0f0d0a18dcdf7c57e75f6a0ca1/affinegap-1.8-py2.7-linux-x86_64.egg (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,373 Found link https://files.pythonhosted.org/packages/c6/db/7eb6048c75cf02a2d5d0044634ed8f56584aabf3b8d735f05dae63a4bfad/affinegap-1.8.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.8 2025-09-08T03:06:41,373 Found link https://files.pythonhosted.org/packages/fd/15/3907af2e7bb16a8ee1232819240c2b3f362eec440e37569fed77c8cc053e/affinegap-1.9.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.9 2025-09-08T03:06:41,373 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/8d/27/eea091e91baff9977a92acaac879d5c22777c4a5e5da6c91fc470b7300d2/affinegap-1.10-cp27-cp27m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,374 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/14/85/b11fc09297e3934d663042b45bae01050f7f197c0a9f44e7c6765adbd332/affinegap-1.10-cp27-cp27m-macosx_10_13_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,374 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/59/81/35566bbaf47b2cc90ec5552e45febd894fca0d7f54027c35b5492489cc4f/affinegap-1.10-cp27-cp27m-macosx_10_9_x86_64.whl (from 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https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,375 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/4d/67/79e5d62362f8804c43910ffdd180d7ea4fa15ec1c95474c8b15fb54f2a5f/affinegap-1.10-cp34-cp34m-manylinux1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,375 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/55/5f/6d6b6612453ccdd00b641042cb9c0b0f5a09fe4d57fa7fe16643189de807/affinegap-1.10-cp34-cp34m-win32.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,375 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/a1/78/937aa2182d2e73cbf25e09cbd05728aeecd489ae8f956b21517a744eba0c/affinegap-1.10-cp34-cp34m-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,375 Skipping link: No binaries permitted for affinegap: 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https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,376 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/d8/ef/f722b3b93594f9effebf8a64278b3aba95808cf5eea97a9f0790e97370ea/affinegap-1.10-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,376 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/d8/d1/d708c53cfb9a9cec0b5be687a12cf87645e6b00aeb26bbcb63f431f3a0f6/affinegap-1.10-cp36-cp36m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,376 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/06/92/59487a717a3e18724d969bb36f5ea551dc97cc06264d31123c4cad61cb04/affinegap-1.10-cp36-cp36m-manylinux1_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,376 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/bf/d1/5ee277dc9d895bc44d34378d81db9e1499b1c46a6248b6bc0a206100f393/affinegap-1.10-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,376 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/94/40/851e59bf71913ebe78302e0dab991c798aa03c09db34b70e5bf20d934b22/affinegap-1.10-cp36-cp36m-win32.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,376 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/63/ab/52c3c299861a47891785a6efddeeb02de8c7984c391b1dcdf1bb42561684/affinegap-1.10-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,377 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/8b/6e/bfdb501b6d8086f3fe29c0713e64016bc746d37ed5e60d45e540d92e8198/affinegap-1.10-cp37-cp37m-macosx_10_13_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,377 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/39/3d/f70d03c31bab21ce5e6948875224f22c43d9179b3afb04ef88ce56ec74a3/affinegap-1.10-cp37-cp37m-manylinux1_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,377 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/d6/54/f4e186e748f9589b700e51ea65fc1be5a952db9943de8be035656bce1445/affinegap-1.10-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,377 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/86/ed/ca4a8163a05b83dcb558a43685ad506d1ab43ee7ad209957700199aefc6b/affinegap-1.10-cp37-cp37m-win32.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,377 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/4a/10/c2a8b80614d6a8e89afc1f8b07f32e15f18b43b43e6aef5d6d1c5d37a3dd/affinegap-1.10-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,377 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/f2/2b/a5acba9ddde902a31e73ce144789def91d670d89aee70ba6125a3d907620/affinegap-1.10-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,377 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/50/52/02beb6a7ca20df289d7784d473bc7993ff5e3bba53eaf4cafa529bfde8b3/affinegap-1.10-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,378 Found link https://files.pythonhosted.org/packages/d7/f6/3e188daf864cffb526a786f81112bdb42dab94cd19513d8196389bf484f3/affinegap-1.10.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.10 2025-09-08T03:06:41,378 Skipping link: No binaries 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binaries permitted for affinegap: https://files.pythonhosted.org/packages/20/57/2ce921d0310da7fb1e81addcc6be16ab67404c420a2ffa9a0ebac7ead0c7/affinegap-1.12-cp310-cp310-macosx_10_9_universal2.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,380 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/52/9f/9d79304176d9e1fffe01d73a94cc785af144bb57d8bb3fe5b1dc4dfa95ec/affinegap-1.12-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,380 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/0e/20/5d39677d52346f3c6402d2aaf5db547a3dc5fe69994917b9908d73e49951/affinegap-1.12-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,380 Skipping link: No binaries permitted for affinegap: 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https://files.pythonhosted.org/packages/dd/47/bc503d3db509b805d73d6d3a36f95aa2eeaf9017ce7624e1859146d0153a/affinegap-1.12-cp310-cp310-musllinux_1_1_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,380 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/a7/05/0902a0e495146333b4cd49c2ca6fb06f6befbc938263fc836a247ad66551/affinegap-1.12-cp310-cp310-musllinux_1_1_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,381 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/30/52/b8045ebe204f236beda0a5f3325844ba841d444d28a54930e6cc7e512a84/affinegap-1.12-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,381 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/eb/1a/82f1e94d0c07bd99df1f14334269dfa1218d16fc261ec0fb271b7a275e4c/affinegap-1.12-cp310-cp310-win32.whl (from 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https://files.pythonhosted.org/packages/8c/c0/9977c939f1841c755aea90ad91444e0ca6727d0c25b818774d9125a2f2cc/affinegap-1.12-cp36-cp36m-manylinux_2_5_i686.manylinux1_i686.manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,381 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/11/23/d89e147823f3abff611f0b0bad405bcc9a196cf4f846f247c162a1699b59/affinegap-1.12-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,382 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/80/a5/f220a46f9b3937a4fb6b7f050f033237f2aae940ac82b7e929608ff47789/affinegap-1.12-cp36-cp36m-musllinux_1_1_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,382 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/b1/3d/69543e3e6acf39270e5f1ed35de68c0de3edb690148a4c2808d28f91a2ad/affinegap-1.12-cp36-cp36m-musllinux_1_1_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,382 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/57/91/cb44068ff4718d02c76afc8768c0a9eaf979097cded0a3081f9a0613091d/affinegap-1.12-cp36-cp36m-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,382 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/d1/91/17babde8aaba23c73a95ebe2ee93e985e176435c2cd799b798e461b250bc/affinegap-1.12-cp36-cp36m-win32.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,382 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/1e/80/811df9e68fe3d6e48e1c040c2b755e8048a9a66c3f3c389b8d3d0fe5b6f5/affinegap-1.12-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,382 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/d0/90/a539d2dda5ef712af0e84e7098fec0d54135197cce594ea29c5ff959e120/affinegap-1.12-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,382 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/2f/61/f030fa9264f4f0b3fd03f6265eae0c0ef643a838c54ea8e78697730f086b/affinegap-1.12-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,383 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/f8/a9/6f8d4c98474daf576bd852986c371e60ed22914bbd727b84fb8d327f97f1/affinegap-1.12-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,383 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/1a/46/fb8869dc485519af638c46df4cc0584396fdd7f06709b98bf7309b4e83cb/affinegap-1.12-cp37-cp37m-manylinux_2_5_i686.manylinux1_i686.manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,383 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/5b/7b/37481c0bfa5fdb35fbd808da66466485edecd518776fe22b0ce87fe124a3/affinegap-1.12-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,383 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/7d/e2/91fafff6b3bcd32a39e3c5447c2c1046df74d52adfcc47136eb5c3017b59/affinegap-1.12-cp37-cp37m-musllinux_1_1_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,383 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/1d/4f/fc3609a46f89cbbd3afeacedc08478629c613195666464e39286c806b2c1/affinegap-1.12-cp37-cp37m-musllinux_1_1_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,383 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/2f/01/b673acecf839705800da24bca4e3e021beaaf80505da56fedaaf3c058f5b/affinegap-1.12-cp37-cp37m-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,383 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/df/2c/ff768327a651c7be0156cc3e4c6d614b739106a9b29a69d849a4e446f80a/affinegap-1.12-cp37-cp37m-win32.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,383 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/b7/df/5bb00946e39af6986f92b1c7b7b2ca08a5f050d48f024d42c4f54c838f8a/affinegap-1.12-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,384 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/83/6f/1b170d9e2dbc59a7068604e5e2b4d6041d8e32afd220c5abc11929f6240a/affinegap-1.12-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,384 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/09/fc/0cba13c89d66e413ea7129747f95524fdbd03faea67ab22c7c80ee28885a/affinegap-1.12-cp38-cp38-macosx_10_9_universal2.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,384 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/bc/fc/e9caa4a37648dcc86885264645679f0380946d1a1e66b3d62ded28422196/affinegap-1.12-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,384 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/7f/f4/b03359d856a8388d1b5754c2e22130ed9d4d7b8dca442992421e2251f5d0/affinegap-1.12-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,384 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/04/63/e80f6484372b06780332f651999202c23dd7c54dd197e6c26d167ff22e8d/affinegap-1.12-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,384 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/a5/e4/974c00e856a710c8b7b4d3d07eab3a177e3ae3582fce65b1ce5e994db6ab/affinegap-1.12-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,384 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/97/6d/566f28f9c5a31711a52619dd8941433bed91cc4daf11f7bb23c0dd03ad4c/affinegap-1.12-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,385 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/b8/fc/98ea5b8f445403fc6be47309d73e88ce9bdaecf932c97175c495e01989a2/affinegap-1.12-cp38-cp38-musllinux_1_1_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,385 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/33/02/0caa755f20b3dd75e799daad8c28184aa3b7f90196a8ddda019bc18b66fc/affinegap-1.12-cp38-cp38-musllinux_1_1_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,385 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/45/d1/9068fc7b17f365dece6a4f3ff2862e46f9766817bfa019a018c26dbdbdd1/affinegap-1.12-cp38-cp38-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,385 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/d8/08/8077984890d56719dbf13e23b3b9fa46f81776457c55842c8a36e4697949/affinegap-1.12-cp38-cp38-win32.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,385 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/e1/f3/8286aa9d62184e99984905bb72b3685639eee9cad1df015581218d977fd1/affinegap-1.12-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,385 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/04/49/aea5e4c620aa1a6dfa4b4c9ec525ba5686565cc7c74de8291a2b49078301/affinegap-1.12-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,385 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/9c/08/f0d56510c76db29e054e05032183ed4e9c939a3c743263de7b266edc4023/affinegap-1.12-cp39-cp39-macosx_10_9_universal2.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,386 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/76/3b/ab5328d8bb0787e61653fd7371c81479327509072f0d6a599e0228ee7a7e/affinegap-1.12-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,386 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/33/9d/66e7ae133550f16b84b5a78a1f5c1a3428e8127139c3e232448a6f3c0c60/affinegap-1.12-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,386 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/0d/56/106aadbff54598d055595f268bcdb26a539c3cacf3f36664faebc8f809ae/affinegap-1.12-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,386 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/ed/90/95eecfaac3224fabc301942b94acf9a05babee10637077bc24e8430f23b8/affinegap-1.12-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,386 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/20/51/2eea053e104b1def1271b0d2698c3032d3dfd1b3c8656633cf1be8ebdbda/affinegap-1.12-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,386 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/4b/0b/b58d7a274423fb84a6ff9f7abd3e642de318b2f767ed5430240e2dd2e0ce/affinegap-1.12-cp39-cp39-musllinux_1_1_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,386 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/dd/9e/fe66bc0ac8283f5f99175b5f4a9a4498d500f33166cb9344790a59245b47/affinegap-1.12-cp39-cp39-musllinux_1_1_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,386 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/c3/09/32633ef4151e9c23587af3e675f4dca5f1d9aca21123be58ba5729d43762/affinegap-1.12-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,387 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/2f/1b/4f7f33db4d029876a43a74efe834ba404601fe9978f2eb5174edb4d211da/affinegap-1.12-cp39-cp39-win32.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,387 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/d6/8d/ae537a64af2dfeb21402eab0633c2335714161e933d736a17194fcc0f646/affinegap-1.12-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,387 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/a6/ad/6c3722e3049cbe0376664d8b63621f96ccb2ee90c1ea53597e86d7f8bb50/affinegap-1.12-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,387 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/6f/66/c0a96d707086626829026119afb00ccf27e1d83713c309251bbbd779bd0a/affinegap-1.12-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,387 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/a5/cd/2b978e5d46e2fa1d726b2caeb6f668ff6a042581b84db67407fdf6edbf9a/affinegap-1.12-pp37-pypy37_pp73-manylinux_2_5_i686.manylinux1_i686.manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,387 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/2b/10/98136d20cc54bbe586e0ef3fe5a04ecc5ef688c40bf9c1a38db1cddb54e6/affinegap-1.12-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,387 Skipping link: No binaries permitted for affinegap: https://files.pythonhosted.org/packages/51/a7/a053a4faa8901b37475ddf81428e8da4f959e54002de2c7a8491e2c5b733/affinegap-1.12-pp37-pypy37_pp73-win_amd64.whl (from https://pypi.org/simple/affinegap/) 2025-09-08T03:06:41,388 Found link https://files.pythonhosted.org/packages/57/9a/7cec45838645ccd9ea56a992301dbcc1a062cdb87e0725144c6200d93c72/affinegap-1.12.tar.gz (from https://pypi.org/simple/affinegap/), version: 1.12 2025-09-08T03:06:41,388 Fetching project page and analyzing links: https://www.piwheels.org/simple/affinegap/ 2025-09-08T03:06:41,388 Getting page https://www.piwheels.org/simple/affinegap/ 2025-09-08T03:06:41,389 Found index url https://www.piwheels.org/simple/ 2025-09-08T03:06:41,485 Fetched page https://www.piwheels.org/simple/affinegap/ as text/html 2025-09-08T03:06:41,502 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.12-cp311-cp311-linux_armv6l.whl#sha256=6a0c9fc1bfa4c386e78a4765ea3fe812bcd1ef24812dd6e800d5004090501791 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,503 Skipping link: No binaries permitted for affinegap: 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https://archive1.piwheels.org/simple/affinegap/affinegap-1.3-cp34-cp34m-linux_armv6l.whl#sha256=8ee44c69e176ded2621eec92f7895ffdd1f690b9208a562b1757fe7c6cdd7114 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,514 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.3-cp34-cp34m-linux_armv7l.whl#sha256=8ee44c69e176ded2621eec92f7895ffdd1f690b9208a562b1757fe7c6cdd7114 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,514 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.3-cp39-cp39-linux_armv6l.whl#sha256=6a19a72a16106fc18c316b3566a2e4df2b655fa52d70c682f851a587ee1b12f9 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,514 Skipping link: No binaries permitted for affinegap: 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https://archive1.piwheels.org/simple/affinegap/affinegap-1.2-cp34-cp34m-linux_armv6l.whl#sha256=77788b0a2c0c2c5c4088a4cdcbae28b2602224a967a4088c617d870d7f873e11 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,515 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.2-cp34-cp34m-linux_armv7l.whl#sha256=77788b0a2c0c2c5c4088a4cdcbae28b2602224a967a4088c617d870d7f873e11 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,515 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.2-cp35-cp35m-linux_armv7l.whl#sha256=57c65bfa258e37832d6ddb90c3890cd11cc23720fdbdd7a8587a8f8a759e0c09 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,515 Skipping link: No binaries permitted for affinegap: 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https://archive1.piwheels.org/simple/affinegap/affinegap-1.1-cp37-cp37m-linux_armv7l.whl#sha256=574fc0a0e5966c23613ab5fa3e2afac0087f22322fb8b2d4e87419bfcc08d9f3 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,515 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.1-cp37-cp37m-linux_armv6l.whl#sha256=574fc0a0e5966c23613ab5fa3e2afac0087f22322fb8b2d4e87419bfcc08d9f3 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,516 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.1-cp34-cp34m-linux_armv6l.whl#sha256=46ea6d2704d23cf6bb18dbe58bca081fec4ea2eac769a2e1c8604c47013f467b (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,516 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.1-cp34-cp34m-linux_armv7l.whl#sha256=46ea6d2704d23cf6bb18dbe58bca081fec4ea2eac769a2e1c8604c47013f467b (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,516 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.1-cp35-cp35m-linux_armv7l.whl#sha256=e5623366cb3bd823dcaa720f977b354a1c74956b36d3a448d044f3ada596ace4 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,516 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.1-cp35-cp35m-linux_armv6l.whl#sha256=e5623366cb3bd823dcaa720f977b354a1c74956b36d3a448d044f3ada596ace4 (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,516 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.1-cp39-cp39-linux_armv6l.whl#sha256=01403e60a112a32bd87c82a08d03c5b421dc4f36d72c344e92bc041e8408abed (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,516 Skipping link: No binaries permitted for affinegap: https://archive1.piwheels.org/simple/affinegap/affinegap-1.1-cp39-cp39-linux_armv7l.whl#sha256=01403e60a112a32bd87c82a08d03c5b421dc4f36d72c344e92bc041e8408abed (from https://www.piwheels.org/simple/affinegap/) 2025-09-08T03:06:41,516 Skipping link: not a file: https://www.piwheels.org/simple/affinegap/ 2025-09-08T03:06:41,517 Skipping link: not a file: https://pypi.org/simple/affinegap/ 2025-09-08T03:06:41,541 Given no hashes to check 1 links for project 'affinegap': discarding no candidates 2025-09-08T03:06:41,542 Collecting affinegap==1.4 2025-09-08T03:06:41,543 Created temporary directory: /tmp/pip-unpack-m3dhk7k_ 2025-09-08T03:06:41,692 Downloading affinegap-1.4.tar.gz (39 kB) 2025-09-08T03:06:41,722 Added affinegap==1.4 from https://files.pythonhosted.org/packages/a8/74/aa32690272798769d0e70ef72d6b83d5223faeefaf38e7ff660560c5ec60/affinegap-1.4.tar.gz to build tracker '/tmp/pip-build-tracker-u0s3o5w2' 2025-09-08T03:06:41,724 Running setup.py (path:/tmp/pip-wheel-m8m_brlt/affinegap_3a6d7500baa148a68e4313f0b820f6b5/setup.py) egg_info for package affinegap 2025-09-08T03:06:41,724 Created temporary directory: /tmp/pip-pip-egg-info-xs1ruetc 2025-09-08T03:06:41,724 Preparing metadata (setup.py): started 2025-09-08T03:06:41,725 Running command python setup.py egg_info 2025-09-08T03:06:43,345 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T03:06:43,345 !! 2025-09-08T03:06:43,346 ******************************************************************************** 2025-09-08T03:06:43,346 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T03:06:43,346 License :: OSI Approved :: MIT License 2025-09-08T03:06:43,346 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T03:06:43,346 ******************************************************************************** 2025-09-08T03:06:43,346 !! 2025-09-08T03:06:43,346 self._finalize_license_expression() 2025-09-08T03:06:43,435 running egg_info 2025-09-08T03:06:43,525 creating /tmp/pip-pip-egg-info-xs1ruetc/affinegap.egg-info 2025-09-08T03:06:43,526 writing /tmp/pip-pip-egg-info-xs1ruetc/affinegap.egg-info/PKG-INFO 2025-09-08T03:06:43,527 writing dependency_links to /tmp/pip-pip-egg-info-xs1ruetc/affinegap.egg-info/dependency_links.txt 2025-09-08T03:06:43,528 writing requirements to /tmp/pip-pip-egg-info-xs1ruetc/affinegap.egg-info/requires.txt 2025-09-08T03:06:43,529 writing top-level names to /tmp/pip-pip-egg-info-xs1ruetc/affinegap.egg-info/top_level.txt 2025-09-08T03:06:43,530 writing manifest file '/tmp/pip-pip-egg-info-xs1ruetc/affinegap.egg-info/SOURCES.txt' 2025-09-08T03:06:43,885 reading manifest file '/tmp/pip-pip-egg-info-xs1ruetc/affinegap.egg-info/SOURCES.txt' 2025-09-08T03:06:43,888 writing manifest file '/tmp/pip-pip-egg-info-xs1ruetc/affinegap.egg-info/SOURCES.txt' 2025-09-08T03:06:44,044 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T03:06:44,050 Source in /tmp/pip-wheel-m8m_brlt/affinegap_3a6d7500baa148a68e4313f0b820f6b5 has version 1.4, which satisfies requirement affinegap==1.4 from https://files.pythonhosted.org/packages/a8/74/aa32690272798769d0e70ef72d6b83d5223faeefaf38e7ff660560c5ec60/affinegap-1.4.tar.gz 2025-09-08T03:06:44,050 Removed affinegap==1.4 from https://files.pythonhosted.org/packages/a8/74/aa32690272798769d0e70ef72d6b83d5223faeefaf38e7ff660560c5ec60/affinegap-1.4.tar.gz from build tracker '/tmp/pip-build-tracker-u0s3o5w2' 2025-09-08T03:06:44,054 Created temporary directory: /tmp/pip-unpack-6vthsq1s 2025-09-08T03:06:44,054 Created temporary directory: /tmp/pip-unpack-jw4t_0fs 2025-09-08T03:06:44,054 Building wheels for collected packages: affinegap 2025-09-08T03:06:44,056 Created temporary directory: /tmp/pip-wheel-8fwnw131 2025-09-08T03:06:44,056 DEPRECATION: Building 'affinegap' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'affinegap'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T03:06:44,058 Building wheel for affinegap (setup.py): started 2025-09-08T03:06:44,058 Destination directory: /tmp/pip-wheel-8fwnw131 2025-09-08T03:06:44,059 Running command python setup.py bdist_wheel 2025-09-08T03:06:45,671 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T03:06:45,672 !! 2025-09-08T03:06:45,672 ******************************************************************************** 2025-09-08T03:06:45,672 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T03:06:45,672 License :: OSI Approved :: MIT License 2025-09-08T03:06:45,673 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T03:06:45,673 ******************************************************************************** 2025-09-08T03:06:45,673 !! 2025-09-08T03:06:45,673 self._finalize_license_expression() 2025-09-08T03:06:45,673 running bdist_wheel 2025-09-08T03:06:46,107 running build 2025-09-08T03:06:46,108 running build_py 2025-09-08T03:06:46,199 creating build/lib.linux-armv7l-cpython-313/affinegap 2025-09-08T03:06:46,199 copying affinegap/__init__.py -> build/lib.linux-armv7l-cpython-313/affinegap 2025-09-08T03:06:46,201 running build_ext 2025-09-08T03:06:46,543 building 'affinegap.affinegap' extension 2025-09-08T03:06:46,544 creating build/temp.linux-armv7l-cpython-313/affinegap 2025-09-08T03:06:46,544 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c affinegap/affinegap.c -o build/temp.linux-armv7l-cpython-313/affinegap/affinegap.o 2025-09-08T03:06:47,120 affinegap/affinegap.c: In function ‘__pyx_pf_5numpy_7ndarray___getbuffer__’: 2025-09-08T03:06:47,123 affinegap/affinegap.c:2632:50: error: ‘NPY_C_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_C_CONTIGUOUS’? 2025-09-08T03:06:47,123 2632 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_C_CONTIGUOUS) != 0)) != 0); 2025-09-08T03:06:47,123 | ^~~~~~~~~~~~~~~~ 2025-09-08T03:06:47,123 | PyBUF_C_CONTIGUOUS 2025-09-08T03:06:47,123 affinegap/affinegap.c:2632:50: note: each undeclared identifier is reported only once for each function it appears in 2025-09-08T03:06:47,151 affinegap/affinegap.c:2688:50: error: ‘NPY_F_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_F_CONTIGUOUS’? 2025-09-08T03:06:47,151 2688 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_F_CONTIGUOUS) != 0)) != 0); 2025-09-08T03:06:47,151 | ^~~~~~~~~~~~~~~~ 2025-09-08T03:06:47,151 | PyBUF_F_CONTIGUOUS 2025-09-08T03:06:47,161 affinegap/affinegap.c: In function ‘__pyx_f_5numpy__util_dtypestring’: 2025-09-08T03:06:47,164 affinegap/affinegap.c:3754:29: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T03:06:47,164 3754 | if (unlikely(__pyx_v_descr->names == Py_None)) { 2025-09-08T03:06:47,164 | ^~ 2025-09-08T03:06:47,165 affinegap/affinegap.c:435:43: note: in definition of macro ‘unlikely’ 2025-09-08T03:06:47,165 435 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T03:06:47,165 | ^ 2025-09-08T03:06:47,168 affinegap/affinegap.c:3758:28: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T03:06:47,168 3758 | __pyx_t_1 = __pyx_v_descr->names; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; 2025-09-08T03:06:47,169 | ^~ 2025-09-08T03:06:47,173 affinegap/affinegap.c:3777:31: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T03:06:47,173 3777 | if (unlikely(__pyx_v_descr->fields == Py_None)) { 2025-09-08T03:06:47,174 | ^~ 2025-09-08T03:06:47,174 affinegap/affinegap.c:435:43: note: in definition of macro ‘unlikely’ 2025-09-08T03:06:47,174 435 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T03:06:47,174 | ^ 2025-09-08T03:06:47,177 affinegap/affinegap.c:3781:51: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T03:06:47,178 3781 | __pyx_t_3 = __Pyx_PyDict_GetItem(__pyx_v_descr->fields, __pyx_v_childname); if (unlikely(__pyx_t_3 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; 2025-09-08T03:06:47,178 | ^~ 2025-09-08T03:06:47,188 affinegap/affinegap.c:3986:79: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘elsize’ 2025-09-08T03:06:47,188 3986 | (__pyx_v_offset[__pyx_t_8]) = ((__pyx_v_offset[__pyx_t_8]) + __pyx_v_child->elsize); 2025-09-08T03:06:47,188 | ^~ 2025-09-08T03:06:47,241 affinegap/affinegap.c: In function ‘__Pyx_PyUnicode_Equals’: 2025-09-08T03:06:47,247 affinegap/affinegap.c:79:51: error: implicit declaration of function ‘_PyUnicode_Ready’; did you mean ‘PyUnicode_READY’? [-Wimplicit-function-declaration] 2025-09-08T03:06:47,247 79 | 0 : _PyUnicode_Ready((PyObject *)(op))) 2025-09-08T03:06:47,247 | ^~~~~~~~~~~~~~~~ 2025-09-08T03:06:47,247 affinegap/affinegap.c:435:43: note: in definition of macro ‘unlikely’ 2025-09-08T03:06:47,247 435 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T03:06:47,248 | ^ 2025-09-08T03:06:47,248 affinegap/affinegap.c:5115:22: note: in expansion of macro ‘__Pyx_PyUnicode_READY’ 2025-09-08T03:06:47,248 5115 | if (unlikely(__Pyx_PyUnicode_READY(s1) < 0) || unlikely(__Pyx_PyUnicode_READY(s2) < 0)) 2025-09-08T03:06:47,248 | ^~~~~~~~~~~~~~~~~~~~~ 2025-09-08T03:06:47,257 affinegap/affinegap.c: In function ‘__Pyx_ErrRestore’: 2025-09-08T03:06:47,262 affinegap/affinegap.c:5186:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T03:06:47,263 5186 | tmp_type = tstate->curexc_type; 2025-09-08T03:06:47,263 | ^~ 2025-09-08T03:06:47,268 affinegap/affinegap.c:5187:23: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T03:06:47,268 5187 | tmp_value = tstate->curexc_value; 2025-09-08T03:06:47,268 | ^~ 2025-09-08T03:06:47,273 affinegap/affinegap.c:5188:20: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T03:06:47,274 5188 | tmp_tb = tstate->curexc_traceback; 2025-09-08T03:06:47,274 | ^~ 2025-09-08T03:06:47,279 affinegap/affinegap.c:5189:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T03:06:47,279 5189 | tstate->curexc_type = type; 2025-09-08T03:06:47,279 | ^~ 2025-09-08T03:06:47,285 affinegap/affinegap.c:5190:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T03:06:47,285 5190 | tstate->curexc_value = value; 2025-09-08T03:06:47,285 | ^~ 2025-09-08T03:06:47,290 affinegap/affinegap.c:5191:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T03:06:47,290 5191 | tstate->curexc_traceback = tb; 2025-09-08T03:06:47,290 | ^~ 2025-09-08T03:06:47,291 affinegap/affinegap.c: In function ‘__Pyx_ErrFetch’: 2025-09-08T03:06:47,296 affinegap/affinegap.c:5202:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T03:06:47,296 5202 | *type = tstate->curexc_type; 2025-09-08T03:06:47,296 | ^~ 2025-09-08T03:06:47,301 affinegap/affinegap.c:5203:20: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T03:06:47,302 5203 | *value = tstate->curexc_value; 2025-09-08T03:06:47,302 | ^~ 2025-09-08T03:06:47,307 affinegap/affinegap.c:5204:17: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T03:06:47,307 5204 | *tb = tstate->curexc_traceback; 2025-09-08T03:06:47,307 | ^~ 2025-09-08T03:06:47,313 affinegap/affinegap.c:5205:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_type’ 2025-09-08T03:06:47,313 5205 | tstate->curexc_type = 0; 2025-09-08T03:06:47,313 | ^~ 2025-09-08T03:06:47,318 affinegap/affinegap.c:5206:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_value’ 2025-09-08T03:06:47,318 5206 | tstate->curexc_value = 0; 2025-09-08T03:06:47,318 | ^~ 2025-09-08T03:06:47,324 affinegap/affinegap.c:5207:11: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T03:06:47,324 5207 | tstate->curexc_traceback = 0; 2025-09-08T03:06:47,324 | ^~ 2025-09-08T03:06:47,348 affinegap/affinegap.c: In function ‘__Pyx_ParseOptionalKeywords’: 2025-09-08T03:06:47,356 affinegap/affinegap.c:5335:22: error: implicit declaration of function ‘PyUnicode_GET_SIZE’; did you mean ‘PyDict_GET_SIZE’? [-Wimplicit-function-declaration] 2025-09-08T03:06:47,357 5335 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2025-09-08T03:06:47,357 | ^~~~~~~~~~~~~~~~~~ 2025-09-08T03:06:47,357 | PyDict_GET_SIZE 2025-09-08T03:06:47,379 affinegap/affinegap.c: In function ‘__Pyx_Raise’: 2025-09-08T03:06:47,385 affinegap/affinegap.c:5560:34: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T03:06:47,385 5560 | PyObject* tmp_tb = tstate->curexc_traceback; 2025-09-08T03:06:47,385 | ^~ 2025-09-08T03:06:47,391 affinegap/affinegap.c:5563:19: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘curexc_traceback’ 2025-09-08T03:06:47,391 5563 | tstate->curexc_traceback = tb; 2025-09-08T03:06:47,391 | ^~ 2025-09-08T03:06:47,407 affinegap/affinegap.c: In function ‘__Pyx_CreateCodeObjectForTraceback’: 2025-09-08T03:06:47,413 affinegap/affinegap.c:5796:5: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T03:06:47,413 5796 | py_code = __Pyx_PyCode_New( 2025-09-08T03:06:47,413 | ^~~~~~~ 2025-09-08T03:06:47,414 In file included from /usr/include/python3.13/Python.h:101, 2025-09-08T03:06:47,414 from affinegap/affinegap.c:4: 2025-09-08T03:06:47,414 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T03:06:47,414 213 | PyCode_New( 2025-09-08T03:06:47,414 | ^~~~~~~~~~ 2025-09-08T03:06:47,420 affinegap/affinegap.c:5810:9: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T03:06:47,420 5810 | py_line, 2025-09-08T03:06:47,420 | ^~~~~~~ 2025-09-08T03:06:47,420 | | 2025-09-08T03:06:47,420 | int 2025-09-08T03:06:47,420 affinegap/affinegap.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T03:06:47,420 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T03:06:47,420 | ^~~~~ 2025-09-08T03:06:47,420 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T03:06:47,421 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T03:06:47,421 | ~~~~~~~~~~^ 2025-09-08T03:06:47,426 affinegap/affinegap.c:5811:9: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T03:06:47,427 5811 | __pyx_empty_bytes /*PyObject *lnotab*/ 2025-09-08T03:06:47,427 | ^~~~~~~~~~~~~~~~~ 2025-09-08T03:06:47,427 | | 2025-09-08T03:06:47,427 | PyObject * {aka struct _object *} 2025-09-08T03:06:47,427 affinegap/affinegap.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T03:06:47,427 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T03:06:47,427 | ^~~~ 2025-09-08T03:06:47,427 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T03:06:47,427 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T03:06:47,427 | ~~~~^ 2025-09-08T03:06:47,433 affinegap/affinegap.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T03:06:47,433 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T03:06:47,433 | ^~~~~~~~~~ 2025-09-08T03:06:47,433 affinegap/affinegap.c:5796:15: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T03:06:47,434 5796 | py_code = __Pyx_PyCode_New( 2025-09-08T03:06:47,434 | ^~~~~~~~~~~~~~~~ 2025-09-08T03:06:47,434 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T03:06:47,434 213 | PyCode_New( 2025-09-08T03:06:47,434 | ^~~~~~~~~~ 2025-09-08T03:06:47,437 affinegap/affinegap.c: In function ‘__Pyx_AddTraceback’: 2025-09-08T03:06:47,442 affinegap/affinegap.c:5839:13: error: invalid use of incomplete typedef ‘PyFrameObject’ {aka ‘struct _frame’} 2025-09-08T03:06:47,443 5839 | py_frame->f_lineno = py_line; 2025-09-08T03:06:47,443 | ^~ 2025-09-08T03:06:47,444 affinegap/affinegap.c: At top level: 2025-09-08T03:06:47,449 affinegap/affinegap.c:5894:12: fatal error: longintrepr.h: No such file or directory 2025-09-08T03:06:47,450 5894 | #include "longintrepr.h" 2025-09-08T03:06:47,450 | ^~~~~~~~~~~~~~~ 2025-09-08T03:06:47,450 compilation terminated. 2025-09-08T03:06:47,454 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-08T03:06:47,648 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T03:06:47,661 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T03:06:47,661 exec(compile('"'"''"'"''"'"' 2025-09-08T03:06:47,661 # This is -- a caller that pip uses to run setup.py 2025-09-08T03:06:47,661 # 2025-09-08T03:06:47,661 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T03:06:47,661 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T03:06:47,661 # - It provides a clear error message when setuptools is not installed. 2025-09-08T03:06:47,661 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T03:06:47,661 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T03:06:47,661 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T03:06:47,661 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T03:06:47,661 import os, sys, tokenize, traceback 2025-09-08T03:06:47,661 2025-09-08T03:06:47,661 try: 2025-09-08T03:06:47,661 import setuptools 2025-09-08T03:06:47,661 except ImportError: 2025-09-08T03:06:47,661 print( 2025-09-08T03:06:47,661 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T03:06:47,661 "the build environment with exception:", 2025-09-08T03:06:47,661 file=sys.stderr, 2025-09-08T03:06:47,661 ) 2025-09-08T03:06:47,661 traceback.print_exc() 2025-09-08T03:06:47,661 sys.exit(1) 2025-09-08T03:06:47,661 2025-09-08T03:06:47,661 __file__ = %r 2025-09-08T03:06:47,661 sys.argv[0] = __file__ 2025-09-08T03:06:47,661 2025-09-08T03:06:47,661 if os.path.exists(__file__): 2025-09-08T03:06:47,661 filename = __file__ 2025-09-08T03:06:47,661 with tokenize.open(__file__) as f: 2025-09-08T03:06:47,661 setup_py_code = f.read() 2025-09-08T03:06:47,661 else: 2025-09-08T03:06:47,661 filename = "" 2025-09-08T03:06:47,661 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T03:06:47,661 2025-09-08T03:06:47,661 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T03:06:47,661 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-m8m_brlt/affinegap_3a6d7500baa148a68e4313f0b820f6b5/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-8fwnw131[/] 2025-09-08T03:06:47,661 [bold magenta]cwd[/]: /tmp/pip-wheel-m8m_brlt/affinegap_3a6d7500baa148a68e4313f0b820f6b5/ 2025-09-08T03:06:47,661 Building wheel for affinegap (setup.py): finished with status 'error' 2025-09-08T03:06:47,662 ERROR: Failed building wheel for affinegap 2025-09-08T03:06:47,663 Running setup.py clean for affinegap 2025-09-08T03:06:47,664 Running command python setup.py clean 2025-09-08T03:06:49,385 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T03:06:49,385 !! 2025-09-08T03:06:49,385 ******************************************************************************** 2025-09-08T03:06:49,385 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T03:06:49,386 License :: OSI Approved :: MIT License 2025-09-08T03:06:49,386 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T03:06:49,386 ******************************************************************************** 2025-09-08T03:06:49,386 !! 2025-09-08T03:06:49,386 self._finalize_license_expression() 2025-09-08T03:06:49,489 running clean 2025-09-08T03:06:49,690 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T03:06:49,690 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T03:06:49,691 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T03:06:49,691 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T03:06:49,691 removing 'build' 2025-09-08T03:06:49,864 Failed to build affinegap 2025-09-08T03:06:49,865 ERROR: Failed to build one or more wheels 2025-09-08T03:06:49,866 Exception information: 2025-09-08T03:06:49,866 Traceback (most recent call last): 2025-09-08T03:06:49,866 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T03:06:49,866 status = _inner_run() 2025-09-08T03:06:49,866 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T03:06:49,866 return self.run(options, args) 2025-09-08T03:06:49,866 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T03:06:49,866 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T03:06:49,866 return func(self, options, args) 2025-09-08T03:06:49,866 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T03:06:49,866 raise CommandError("Failed to build one or more wheels") 2025-09-08T03:06:49,866 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T03:06:49,871 Removed build tracker: '/tmp/pip-build-tracker-u0s3o5w2'