2025-09-08T04:50:19,981 Created temporary directory: /tmp/pip-build-tracker-lnmr_eey 2025-09-08T04:50:19,982 Initialized build tracking at /tmp/pip-build-tracker-lnmr_eey 2025-09-08T04:50:19,982 Created build tracker: /tmp/pip-build-tracker-lnmr_eey 2025-09-08T04:50:19,982 Entered build tracker: /tmp/pip-build-tracker-lnmr_eey 2025-09-08T04:50:19,982 Created temporary directory: /tmp/pip-wheel-qpyi8qbk 2025-09-08T04:50:19,985 Created temporary directory: /tmp/pip-ephem-wheel-cache-66d8lxbe 2025-09-08T04:50:20,043 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T04:50:20,045 2 location(s) to search for versions of gbrs: 2025-09-08T04:50:20,045 * https://pypi.org/simple/gbrs/ 2025-09-08T04:50:20,045 * https://www.piwheels.org/simple/gbrs/ 2025-09-08T04:50:20,045 Fetching project page and analyzing links: https://pypi.org/simple/gbrs/ 2025-09-08T04:50:20,046 Getting page https://pypi.org/simple/gbrs/ 2025-09-08T04:50:20,047 Found index url https://pypi.org/simple/ 2025-09-08T04:50:20,117 Fetched page https://pypi.org/simple/gbrs/ as application/vnd.pypi.simple.v1+json 2025-09-08T04:50:20,118 Found link https://files.pythonhosted.org/packages/cc/d4/a685c8830b934b01740b909ce06a02bd6172250b5a332405ea3ee6b32d68/gbrs-0.1.1.tar.gz (from https://pypi.org/simple/gbrs/), version: 0.1.1 2025-09-08T04:50:20,118 Found link https://files.pythonhosted.org/packages/6c/2b/abea077e4d5e3cd265cb248243000d4eb2a05e91ff8f2585c003f487f759/gbrs-0.1.3.tar.gz (from https://pypi.org/simple/gbrs/), version: 0.1.3 2025-09-08T04:50:20,118 Found link https://files.pythonhosted.org/packages/b4/d8/e7d698103c55c8fd34a76fe817a0af88f18f6937299f8ac2954098d1f18b/gbrs-0.1.4.tar.gz (from https://pypi.org/simple/gbrs/), version: 0.1.4 2025-09-08T04:50:20,119 Found link https://files.pythonhosted.org/packages/ba/d5/3b9c584a08a6d95349018e31f569a7d9bdf1c503a7b09ba35c41c5df4c9a/gbrs-0.1.5.tar.gz (from https://pypi.org/simple/gbrs/), version: 0.1.5 2025-09-08T04:50:20,119 Fetching project page and analyzing links: https://www.piwheels.org/simple/gbrs/ 2025-09-08T04:50:20,119 Getting page https://www.piwheels.org/simple/gbrs/ 2025-09-08T04:50:20,120 Found index url https://www.piwheels.org/simple/ 2025-09-08T04:50:20,203 Fetched page https://www.piwheels.org/simple/gbrs/ as text/html 2025-09-08T04:50:20,204 Skipping link: not a file: https://www.piwheels.org/simple/gbrs/ 2025-09-08T04:50:20,204 Skipping link: not a file: https://pypi.org/simple/gbrs/ 2025-09-08T04:50:20,229 Given no hashes to check 1 links for project 'gbrs': discarding no candidates 2025-09-08T04:50:20,230 Collecting gbrs==0.1.5 2025-09-08T04:50:20,231 Created temporary directory: /tmp/pip-unpack-mqec__gn 2025-09-08T04:50:20,373 Downloading gbrs-0.1.5.tar.gz (34 kB) 2025-09-08T04:50:20,412 Added gbrs==0.1.5 from https://files.pythonhosted.org/packages/ba/d5/3b9c584a08a6d95349018e31f569a7d9bdf1c503a7b09ba35c41c5df4c9a/gbrs-0.1.5.tar.gz to build tracker '/tmp/pip-build-tracker-lnmr_eey' 2025-09-08T04:50:20,413 Running setup.py (path:/tmp/pip-wheel-qpyi8qbk/gbrs_018e23e42bdc4c249be3147d354a06b6/setup.py) egg_info for package gbrs 2025-09-08T04:50:20,413 Created temporary directory: /tmp/pip-pip-egg-info-ezt4ab1d 2025-09-08T04:50:20,414 Preparing metadata (setup.py): started 2025-09-08T04:50:20,414 Running command python setup.py egg_info 2025-09-08T04:50:23,615 Traceback (most recent call last): 2025-09-08T04:50:23,617 File "", line 2, in 2025-09-08T04:50:23,617 exec(compile(''' 2025-09-08T04:50:23,617 ~~~~^^^^^^^^^^^^ 2025-09-08T04:50:23,617 # This is -- a caller that pip uses to run setup.py 2025-09-08T04:50:23,617 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,618 ...<32 lines>... 2025-09-08T04:50:23,618 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T04:50:23,618 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,618 ''' % ('/tmp/pip-wheel-qpyi8qbk/gbrs_018e23e42bdc4c249be3147d354a06b6/setup.py',), "", "exec")) 2025-09-08T04:50:23,618 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,618 File "", line 35, in 2025-09-08T04:50:23,618 File "/tmp/pip-wheel-qpyi8qbk/gbrs_018e23e42bdc4c249be3147d354a06b6/setup.py", line 5, in 2025-09-08T04:50:23,618 import gbrs 2025-09-08T04:50:23,619 File "/tmp/pip-wheel-qpyi8qbk/gbrs_018e23e42bdc4c249be3147d354a06b6/gbrs/__init__.py", line 4, in 2025-09-08T04:50:23,619 from .emase_utils import hybridize, align, bam2emase, quantify 2025-09-08T04:50:23,619 File "/tmp/pip-wheel-qpyi8qbk/gbrs_018e23e42bdc4c249be3147d354a06b6/gbrs/emase_utils.py", line 7, in 2025-09-08T04:50:23,619 import emase 2025-09-08T04:50:23,619 ModuleNotFoundError: No module named 'emase' 2025-09-08T04:50:23,976 ERROR: python setup.py egg_info exited with 1 2025-09-08T04:50:23,989 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T04:50:23,989 exec(compile('"'"''"'"''"'"' 2025-09-08T04:50:23,989 # This is -- a caller that pip uses to run setup.py 2025-09-08T04:50:23,989 # 2025-09-08T04:50:23,989 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T04:50:23,989 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T04:50:23,989 # - It provides a clear error message when setuptools is not installed. 2025-09-08T04:50:23,989 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T04:50:23,989 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T04:50:23,989 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T04:50:23,989 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T04:50:23,989 import os, sys, tokenize, traceback 2025-09-08T04:50:23,989 2025-09-08T04:50:23,989 try: 2025-09-08T04:50:23,989 import setuptools 2025-09-08T04:50:23,989 except ImportError: 2025-09-08T04:50:23,989 print( 2025-09-08T04:50:23,989 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T04:50:23,989 "the build environment with exception:", 2025-09-08T04:50:23,989 file=sys.stderr, 2025-09-08T04:50:23,989 ) 2025-09-08T04:50:23,989 traceback.print_exc() 2025-09-08T04:50:23,989 sys.exit(1) 2025-09-08T04:50:23,989 2025-09-08T04:50:23,989 __file__ = %r 2025-09-08T04:50:23,989 sys.argv[0] = __file__ 2025-09-08T04:50:23,989 2025-09-08T04:50:23,989 if os.path.exists(__file__): 2025-09-08T04:50:23,989 filename = __file__ 2025-09-08T04:50:23,989 with tokenize.open(__file__) as f: 2025-09-08T04:50:23,989 setup_py_code = f.read() 2025-09-08T04:50:23,989 else: 2025-09-08T04:50:23,989 filename = "" 2025-09-08T04:50:23,989 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T04:50:23,989 2025-09-08T04:50:23,989 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T04:50:23,989 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-qpyi8qbk/gbrs_018e23e42bdc4c249be3147d354a06b6/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-ezt4ab1d[/] 2025-09-08T04:50:23,989 [bold magenta]cwd[/]: /tmp/pip-wheel-qpyi8qbk/gbrs_018e23e42bdc4c249be3147d354a06b6/ 2025-09-08T04:50:23,990 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T04:50:23,991 ERROR: metadata generation failed 2025-09-08T04:50:23,996 Exception information: 2025-09-08T04:50:23,996 Traceback (most recent call last): 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T04:50:23,996 call_subprocess( 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~^ 2025-09-08T04:50:23,996 args, 2025-09-08T04:50:23,996 ^^^^^ 2025-09-08T04:50:23,996 ...<2 lines>... 2025-09-08T04:50:23,996 spinner=spinner, 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 ) 2025-09-08T04:50:23,996 ^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T04:50:23,996 raise error 2025-09-08T04:50:23,996 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T04:50:23,996 2025-09-08T04:50:23,996 The above exception was the direct cause of the following exception: 2025-09-08T04:50:23,996 2025-09-08T04:50:23,996 Traceback (most recent call last): 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T04:50:23,996 status = _inner_run() 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T04:50:23,996 return self.run(options, args) 2025-09-08T04:50:23,996 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T04:50:23,996 return func(self, options, args) 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T04:50:23,996 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T04:50:23,996 result = self._result = resolver.resolve( 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~^ 2025-09-08T04:50:23,996 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 ) 2025-09-08T04:50:23,996 ^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T04:50:23,996 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T04:50:23,996 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T04:50:23,996 if not criterion.candidates: 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T04:50:23,996 return bool(self._sequence) 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T04:50:23,996 self._bool = any(self) 2025-09-08T04:50:23,996 ~~~^^^^^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T04:50:23,996 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T04:50:23,996 ^^^^^^^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T04:50:23,996 candidate = func() 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T04:50:23,996 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T04:50:23,996 link, template, name, version 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 ) 2025-09-08T04:50:23,996 ^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T04:50:23,996 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~^ 2025-09-08T04:50:23,996 link, 2025-09-08T04:50:23,996 ^^^^^ 2025-09-08T04:50:23,996 ...<3 lines>... 2025-09-08T04:50:23,996 version=version, 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 ) 2025-09-08T04:50:23,996 ^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T04:50:23,996 super().__init__( 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~^ 2025-09-08T04:50:23,996 link=link, 2025-09-08T04:50:23,996 ^^^^^^^^^^ 2025-09-08T04:50:23,996 ...<4 lines>... 2025-09-08T04:50:23,996 version=version, 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 ) 2025-09-08T04:50:23,996 ^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T04:50:23,996 self.dist = self._prepare() 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T04:50:23,996 dist = self._prepare_distribution() 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T04:50:23,996 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T04:50:23,996 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T04:50:23,996 dist = _get_prepared_distribution( 2025-09-08T04:50:23,996 req, 2025-09-08T04:50:23,996 ...<3 lines>... 2025-09-08T04:50:23,996 self.check_build_deps, 2025-09-08T04:50:23,996 ) 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T04:50:23,996 abstract_dist.prepare_distribution_metadata( 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T04:50:23,996 finder, build_isolation, check_build_deps 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 ) 2025-09-08T04:50:23,996 ^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T04:50:23,996 self.req.prepare_metadata() 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T04:50:23,996 self.metadata_directory = generate_metadata_legacy( 2025-09-08T04:50:23,996 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T04:50:23,996 build_env=self.build_env, 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 ...<3 lines>... 2025-09-08T04:50:23,996 details=details, 2025-09-08T04:50:23,996 ^^^^^^^^^^^^^^^^ 2025-09-08T04:50:23,996 ) 2025-09-08T04:50:23,996 ^ 2025-09-08T04:50:23,996 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T04:50:23,996 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T04:50:23,996 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T04:50:24,017 Removed gbrs==0.1.5 from https://files.pythonhosted.org/packages/ba/d5/3b9c584a08a6d95349018e31f569a7d9bdf1c503a7b09ba35c41c5df4c9a/gbrs-0.1.5.tar.gz from build tracker '/tmp/pip-build-tracker-lnmr_eey' 2025-09-08T04:50:24,017 Removed build tracker: '/tmp/pip-build-tracker-lnmr_eey'