2025-09-08T05:19:10,725 Created temporary directory: /tmp/pip-build-tracker-2xtsbba7 2025-09-08T05:19:10,725 Initialized build tracking at /tmp/pip-build-tracker-2xtsbba7 2025-09-08T05:19:10,726 Created build tracker: /tmp/pip-build-tracker-2xtsbba7 2025-09-08T05:19:10,726 Entered build tracker: /tmp/pip-build-tracker-2xtsbba7 2025-09-08T05:19:10,726 Created temporary directory: /tmp/pip-wheel-vjesd3y6 2025-09-08T05:19:10,729 Created temporary directory: /tmp/pip-ephem-wheel-cache-zhojq5nc 2025-09-08T05:19:10,790 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T05:19:10,792 2 location(s) to search for versions of uniprotmapper: 2025-09-08T05:19:10,792 * https://pypi.org/simple/uniprotmapper/ 2025-09-08T05:19:10,792 * https://www.piwheels.org/simple/uniprotmapper/ 2025-09-08T05:19:10,792 Fetching project page and analyzing links: https://pypi.org/simple/uniprotmapper/ 2025-09-08T05:19:10,793 Getting page https://pypi.org/simple/uniprotmapper/ 2025-09-08T05:19:10,794 Found index url https://pypi.org/simple/ 2025-09-08T05:19:10,942 Fetched page https://pypi.org/simple/uniprotmapper/ as application/vnd.pypi.simple.v1+json 2025-09-08T05:19:10,944 Found link https://files.pythonhosted.org/packages/f8/05/247ad1f674e35c290b1f56f4a8f4cb09a21df9109a734fc3017bb568e7af/uniprotmapper-0.0.3.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.0.3.dev0 2025-09-08T05:19:10,945 Found link https://files.pythonhosted.org/packages/1b/67/5e87968d4446daa9a535aee3b639c8c7d6a497499a25183a3a34b5aab856/uniprotmapper-0.0.4.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.0.4.dev0 2025-09-08T05:19:10,946 Found link https://files.pythonhosted.org/packages/34/74/e92073c6373779f15937b3afb796d9bacf25e6f6afd7c01d952aab560730/uniprotmapper-0.1.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.1.dev0 2025-09-08T05:19:10,946 Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/db/17/7a27569f0832ad4fa8a6c93af4aab3eced324f2edd7d1345f30d2b31168d/uniprotmapper-0.2.dev0.macosx-10.11-intel.exe (from https://pypi.org/simple/uniprotmapper/) 2025-09-08T05:19:10,946 Found link https://files.pythonhosted.org/packages/44/75/31c6718890e8d5d1cbdb5ab3300e5f7de5defc73c57b5bcbedab64acbb61/uniprotmapper-0.2.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.2.dev0 2025-09-08T05:19:10,947 Found link https://files.pythonhosted.org/packages/bf/99/004f8c8190c5ca083d6d2d3c3d84bdb6b2b51de800919936503b6ba72723/uniprotmapper-0.3.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.3.dev0 2025-09-08T05:19:10,948 Fetching project page and analyzing links: https://www.piwheels.org/simple/uniprotmapper/ 2025-09-08T05:19:10,948 Getting page https://www.piwheels.org/simple/uniprotmapper/ 2025-09-08T05:19:10,950 Found index url https://www.piwheels.org/simple/ 2025-09-08T05:19:11,051 Fetched page https://www.piwheels.org/simple/uniprotmapper/ as text/html 2025-09-08T05:19:11,053 Skipping link: No binaries permitted for uniprotmapper: https://archive1.piwheels.org/simple/uniprotmapper/uniprotmapper-0.3.dev0-py3-none-any.whl#sha256=a3b6002104169291b3afae42ff80ba44561f50c528c49142e6d8eed0792b6938 (from https://www.piwheels.org/simple/uniprotmapper/) 2025-09-08T05:19:11,053 Skipping link: No binaries permitted for uniprotmapper: https://archive1.piwheels.org/simple/uniprotmapper/uniprotmapper-0.0.4.dev0-py3-none-any.whl#sha256=319e983fb3d079c442b379520044e25c2c1d78913bfa8d151db10f19f2afcc61 (from https://www.piwheels.org/simple/uniprotmapper/) 2025-09-08T05:19:11,053 Skipping link: not a file: https://www.piwheels.org/simple/uniprotmapper/ 2025-09-08T05:19:11,053 Skipping link: not a file: https://pypi.org/simple/uniprotmapper/ 2025-09-08T05:19:11,078 Given no hashes to check 1 links for project 'uniprotmapper': discarding no candidates 2025-09-08T05:19:11,079 Collecting uniprotmapper==0.1.dev0 2025-09-08T05:19:11,080 Created temporary directory: /tmp/pip-unpack-udyn5mag 2025-09-08T05:19:11,216 Downloading uniprotmapper-0.1.dev0.tar.gz (2.7 kB) 2025-09-08T05:19:11,236 Added uniprotmapper==0.1.dev0 from https://files.pythonhosted.org/packages/34/74/e92073c6373779f15937b3afb796d9bacf25e6f6afd7c01d952aab560730/uniprotmapper-0.1.dev0.tar.gz to build tracker '/tmp/pip-build-tracker-2xtsbba7' 2025-09-08T05:19:11,237 Running setup.py (path:/tmp/pip-wheel-vjesd3y6/uniprotmapper_c3fe38c94dd14c8c859a523d3f098f9b/setup.py) egg_info for package uniprotmapper 2025-09-08T05:19:11,238 Created temporary directory: /tmp/pip-pip-egg-info-7c34hosz 2025-09-08T05:19:11,238 Preparing metadata (setup.py): started 2025-09-08T05:19:11,239 Running command python setup.py egg_info 2025-09-08T05:19:11,747 Traceback (most recent call last): 2025-09-08T05:19:11,748 File "", line 2, in 2025-09-08T05:19:11,748 exec(compile(''' 2025-09-08T05:19:11,748 ~~~~^^^^^^^^^^^^ 2025-09-08T05:19:11,748 # This is -- a caller that pip uses to run setup.py 2025-09-08T05:19:11,748 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,748 ...<32 lines>... 2025-09-08T05:19:11,749 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T05:19:11,749 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,749 ''' % ('/tmp/pip-wheel-vjesd3y6/uniprotmapper_c3fe38c94dd14c8c859a523d3f098f9b/setup.py',), "", "exec")) 2025-09-08T05:19:11,749 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,749 File "", line 35, in 2025-09-08T05:19:11,749 File "/tmp/pip-wheel-vjesd3y6/uniprotmapper_c3fe38c94dd14c8c859a523d3f098f9b/setup.py", line 2, in 2025-09-08T05:19:11,749 f=open("README.md", "r") 2025-09-08T05:19:11,749 FileNotFoundError: [Errno 2] No such file or directory: 'README.md' 2025-09-08T05:19:11,833 ERROR: python setup.py egg_info exited with 1 2025-09-08T05:19:11,845 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T05:19:11,845 exec(compile('"'"''"'"''"'"' 2025-09-08T05:19:11,845 # This is -- a caller that pip uses to run setup.py 2025-09-08T05:19:11,845 # 2025-09-08T05:19:11,845 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T05:19:11,845 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T05:19:11,845 # - It provides a clear error message when setuptools is not installed. 2025-09-08T05:19:11,845 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T05:19:11,845 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T05:19:11,845 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T05:19:11,845 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T05:19:11,845 import os, sys, tokenize, traceback 2025-09-08T05:19:11,845 2025-09-08T05:19:11,845 try: 2025-09-08T05:19:11,845 import setuptools 2025-09-08T05:19:11,845 except ImportError: 2025-09-08T05:19:11,845 print( 2025-09-08T05:19:11,845 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T05:19:11,845 "the build environment with exception:", 2025-09-08T05:19:11,845 file=sys.stderr, 2025-09-08T05:19:11,845 ) 2025-09-08T05:19:11,845 traceback.print_exc() 2025-09-08T05:19:11,845 sys.exit(1) 2025-09-08T05:19:11,845 2025-09-08T05:19:11,845 __file__ = %r 2025-09-08T05:19:11,845 sys.argv[0] = __file__ 2025-09-08T05:19:11,845 2025-09-08T05:19:11,845 if os.path.exists(__file__): 2025-09-08T05:19:11,845 filename = __file__ 2025-09-08T05:19:11,845 with tokenize.open(__file__) as f: 2025-09-08T05:19:11,845 setup_py_code = f.read() 2025-09-08T05:19:11,845 else: 2025-09-08T05:19:11,845 filename = "" 2025-09-08T05:19:11,845 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T05:19:11,845 2025-09-08T05:19:11,845 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T05:19:11,845 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-vjesd3y6/uniprotmapper_c3fe38c94dd14c8c859a523d3f098f9b/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-7c34hosz[/] 2025-09-08T05:19:11,846 [bold magenta]cwd[/]: /tmp/pip-wheel-vjesd3y6/uniprotmapper_c3fe38c94dd14c8c859a523d3f098f9b/ 2025-09-08T05:19:11,846 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T05:19:11,847 ERROR: metadata generation failed 2025-09-08T05:19:11,854 Exception information: 2025-09-08T05:19:11,854 Traceback (most recent call last): 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T05:19:11,854 call_subprocess( 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~^ 2025-09-08T05:19:11,854 args, 2025-09-08T05:19:11,854 ^^^^^ 2025-09-08T05:19:11,854 ...<2 lines>... 2025-09-08T05:19:11,854 spinner=spinner, 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 ) 2025-09-08T05:19:11,854 ^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T05:19:11,854 raise error 2025-09-08T05:19:11,854 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T05:19:11,854 2025-09-08T05:19:11,854 The above exception was the direct cause of the following exception: 2025-09-08T05:19:11,854 2025-09-08T05:19:11,854 Traceback (most recent call last): 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T05:19:11,854 status = _inner_run() 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T05:19:11,854 return self.run(options, args) 2025-09-08T05:19:11,854 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T05:19:11,854 return func(self, options, args) 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T05:19:11,854 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T05:19:11,854 result = self._result = resolver.resolve( 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~^ 2025-09-08T05:19:11,854 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 ) 2025-09-08T05:19:11,854 ^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T05:19:11,854 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T05:19:11,854 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T05:19:11,854 if not criterion.candidates: 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T05:19:11,854 return bool(self._sequence) 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T05:19:11,854 self._bool = any(self) 2025-09-08T05:19:11,854 ~~~^^^^^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T05:19:11,854 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T05:19:11,854 ^^^^^^^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T05:19:11,854 candidate = func() 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T05:19:11,854 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T05:19:11,854 link, template, name, version 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 ) 2025-09-08T05:19:11,854 ^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T05:19:11,854 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~^ 2025-09-08T05:19:11,854 link, 2025-09-08T05:19:11,854 ^^^^^ 2025-09-08T05:19:11,854 ...<3 lines>... 2025-09-08T05:19:11,854 version=version, 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 ) 2025-09-08T05:19:11,854 ^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T05:19:11,854 super().__init__( 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~^ 2025-09-08T05:19:11,854 link=link, 2025-09-08T05:19:11,854 ^^^^^^^^^^ 2025-09-08T05:19:11,854 ...<4 lines>... 2025-09-08T05:19:11,854 version=version, 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 ) 2025-09-08T05:19:11,854 ^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T05:19:11,854 self.dist = self._prepare() 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T05:19:11,854 dist = self._prepare_distribution() 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T05:19:11,854 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T05:19:11,854 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T05:19:11,854 dist = _get_prepared_distribution( 2025-09-08T05:19:11,854 req, 2025-09-08T05:19:11,854 ...<3 lines>... 2025-09-08T05:19:11,854 self.check_build_deps, 2025-09-08T05:19:11,854 ) 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T05:19:11,854 abstract_dist.prepare_distribution_metadata( 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T05:19:11,854 finder, build_isolation, check_build_deps 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 ) 2025-09-08T05:19:11,854 ^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T05:19:11,854 self.req.prepare_metadata() 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T05:19:11,854 self.metadata_directory = generate_metadata_legacy( 2025-09-08T05:19:11,854 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T05:19:11,854 build_env=self.build_env, 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 ...<3 lines>... 2025-09-08T05:19:11,854 details=details, 2025-09-08T05:19:11,854 ^^^^^^^^^^^^^^^^ 2025-09-08T05:19:11,854 ) 2025-09-08T05:19:11,854 ^ 2025-09-08T05:19:11,854 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T05:19:11,854 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T05:19:11,854 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T05:19:11,876 Removed uniprotmapper==0.1.dev0 from https://files.pythonhosted.org/packages/34/74/e92073c6373779f15937b3afb796d9bacf25e6f6afd7c01d952aab560730/uniprotmapper-0.1.dev0.tar.gz from build tracker '/tmp/pip-build-tracker-2xtsbba7' 2025-09-08T05:19:11,876 Removed build tracker: '/tmp/pip-build-tracker-2xtsbba7'