2025-09-08T05:50:07,388 Created temporary directory: /tmp/pip-build-tracker-_c8rrk9n
2025-09-08T05:50:07,389 Initialized build tracking at /tmp/pip-build-tracker-_c8rrk9n
2025-09-08T05:50:07,389 Created build tracker: /tmp/pip-build-tracker-_c8rrk9n
2025-09-08T05:50:07,389 Entered build tracker: /tmp/pip-build-tracker-_c8rrk9n
2025-09-08T05:50:07,389 Created temporary directory: /tmp/pip-wheel-b3yfkd51
2025-09-08T05:50:07,393 Created temporary directory: /tmp/pip-ephem-wheel-cache-aox16ugh
2025-09-08T05:50:07,449 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-09-08T05:50:07,451 2 location(s) to search for versions of biomaj-core:
2025-09-08T05:50:07,451 * https://pypi.org/simple/biomaj-core/
2025-09-08T05:50:07,451 * https://www.piwheels.org/simple/biomaj-core/
2025-09-08T05:50:07,451 Fetching project page and analyzing links: https://pypi.org/simple/biomaj-core/
2025-09-08T05:50:07,452 Getting page https://pypi.org/simple/biomaj-core/
2025-09-08T05:50:07,453 Found index url https://pypi.org/simple/
2025-09-08T05:50:07,600 Fetched page https://pypi.org/simple/biomaj-core/ as application/vnd.pypi.simple.v1+json
2025-09-08T05:50:07,613   Found link https://files.pythonhosted.org/packages/37/bb/918493436f50a351579f4aa4637fb6920dba06e6ce8f041b7defbf60b220/biomaj_core-3.0.0.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.0
2025-09-08T05:50:07,614   Found link https://files.pythonhosted.org/packages/57/87/2f8fa1098502490c1fadd1084670ea2c6b2c345015d02dec6884b17f387c/biomaj_core-3.0.1.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.1
2025-09-08T05:50:07,615   Found link https://files.pythonhosted.org/packages/aa/36/ebc6f0b5dc92cf0c6711691dd2b3dbc898453b14ee4545ab2082912e9b76/biomaj_core-3.0.2.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.2
2025-09-08T05:50:07,615   Found link https://files.pythonhosted.org/packages/c2/09/994990d47c94fde296c207aeb8bb5842a971bb822173b5d92a0dacb8abdc/biomaj_core-3.0.3.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.3
2025-09-08T05:50:07,616   Found link https://files.pythonhosted.org/packages/c8/1f/8b0d8927999e80026be79e457b3ea63952295970d58d03df1639d6fc6697/biomaj_core-3.0.4.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.4
2025-09-08T05:50:07,617   Found link https://files.pythonhosted.org/packages/03/4c/34a61af3df131bd60d28daf8ead8be25aea3acba7c11ab9d688ac7dd2415/biomaj_core-3.0.5.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.5
2025-09-08T05:50:07,617   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/41/ff/ce20307ef7c44a7122e706ea17eaa015d25d263c8489a921f12f9847eb9c/biomaj_core-3.0.6-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,617   Found link https://files.pythonhosted.org/packages/f9/a0/d534cc29f1e18c31c66cd0f0521b517efed61f1f34a46a2b3819fcc8821c/biomaj_core-3.0.6.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.6
2025-09-08T05:50:07,618   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/20/eb/e1ebf15e060a3c978088213e54829c4638edb68b20c2ba56bf3708e4b1fc/biomaj_core-3.0.7-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,618   Found link https://files.pythonhosted.org/packages/95/db/89b9b53172e1466f5925b34d8e84ca90b2128bf2f1af2ff20404e99710d0/biomaj_core-3.0.7.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.7
2025-09-08T05:50:07,619   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/ff/cb/8bb63b9201757f926708ee4d0dd93f90f35e53cbeb835e1098d79856dae2/biomaj_core-3.0.8-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,619   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/62/71/f501cdd205a4477815db69dbf0e5b57cb57fc7170c53d14ff147e5257a44/biomaj_core-3.0.9-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,620   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/ac/e2/2d1e99f992a72241f6acbf5f4f21e9d220ec1a4c8773a0802b396212ca1a/biomaj_core-3.0.10-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,620   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/6c/ad/faf88ad96a1afa14a36de0df48b55e0b3fc799627c60770911ab1844d4f0/biomaj_core-3.0.11-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,621   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/1e/10/c3be26cf7cb3f515f9b2b1a244a75de4d87b9339837a1e6188569ef017d7/biomaj_core-3.0.12-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,621   Found link https://files.pythonhosted.org/packages/78/ce/8c0fdc4fb070b394495cadb1308b8fed1bef3540874112091edd48d1537e/biomaj_core-3.0.12.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.12
2025-09-08T05:50:07,621   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/53/cd/cc69b85bbe4c4c9110bc854fedba4333bf22d22218d8066a38796e9866ae/biomaj_core-3.0.13-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,621   Found link https://files.pythonhosted.org/packages/93/de/ad7e24a429c6b617496f0a2d9ef7186e40bcb40e1ad87bf8c80eb66d6ace/biomaj_core-3.0.13.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.13
2025-09-08T05:50:07,622   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/6f/bc/18c822f52e5ddd64647c2fc171affc30300293703e57f8acb738eabf7c3b/biomaj_core-3.0.14-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,622   Found link https://files.pythonhosted.org/packages/f6/ff/12218d5c9c6f8f55185d43409e1dbc637d1de35568fd942c658f1b8b03ce/biomaj_core-3.0.14.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.14
2025-09-08T05:50:07,622   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/22/16/ce9c616a99aa2d168a6afebbdf4131e47421de200a7c1eba4ab446b055b6/biomaj_core-3.0.15-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,622   Found link https://files.pythonhosted.org/packages/69/57/afc6e2fb9370f41aa75e72deb05fe75cb09cd2c82a2661acf7376be08493/biomaj_core-3.0.15.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.15
2025-09-08T05:50:07,623   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/5e/6b/ddf325aa5e9dc2d7a711690f570cb747de8b4e0733bb3bfdc148c3eb1337/biomaj_core-3.0.16-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,623   Found link https://files.pythonhosted.org/packages/c4/e8/626dcb4e19c4e952f11993db9b268762b111111089083bb7245128a0324f/biomaj_core-3.0.16.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.16
2025-09-08T05:50:07,623   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/eb/51/5846ab641dd59f3ed431a710de1a575b5e233a716d11d6a0f3b0573a41d8/biomaj_core-3.0.17-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,623   Found link https://files.pythonhosted.org/packages/67/74/a2307938e86edcd88ae549a877c4794331f3414c1cfea6dc3a646d77bc66/biomaj_core-3.0.17.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.17
2025-09-08T05:50:07,624   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/71/b3/6cecde82d687ace70b0d40f62d6cd7493d9a86f825ddbcb2616556148a7f/biomaj_core-3.0.18-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,624   Found link https://files.pythonhosted.org/packages/3a/d6/e95daca868d885b3cb2d18ec882d31110cc58650ac7d61254e6efbe16f28/biomaj_core-3.0.18.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.18
2025-09-08T05:50:07,624   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/7e/e3/6891b7db1e0071de1737a06074530f7a3da00d2969c0e9f36b9b0e88ccb9/biomaj_core-3.0.19-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,624   Found link https://files.pythonhosted.org/packages/42/90/7c6043f1de43c38081396e18bebded875f0b012dd1b0ff5ff6d14592a898/biomaj_core-3.0.19.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.19
2025-09-08T05:50:07,624   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/06/1c/9aa3a471cb6e9aef2ce38bc7377fad5abc85dce11a6958a32105f9b3f72b/biomaj_core-3.0.20-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,624   Found link https://files.pythonhosted.org/packages/49/8c/f563026d6f270c89b100261c3e453c5b0733a2a56f2c797a7e8e723f37fc/biomaj_core-3.0.20.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.20
2025-09-08T05:50:07,625   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/cd/c0/bdbefc506a1689a70c3ef33ca8afd1627297e35b626f5a82411033451cd7/biomaj_core-3.0.21-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,625   Found link https://files.pythonhosted.org/packages/b2/59/7bd0185bcb34e0022a25f32b17bdb9aa3d461ce19b5e145eeb7775470a3c/biomaj_core-3.0.21.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.21
2025-09-08T05:50:07,625   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/49/0d/22aa1cfdc17aeba7cc93b04accf9f95152652d2300cd74126345327b4800/biomaj_core-3.0.23-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,625   Found link https://files.pythonhosted.org/packages/c0/fa/5d07c5e73254b669a409e08242c028e7ec62c705931f60d848ed33aebcc8/biomaj_core-3.0.23.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.23
2025-09-08T05:50:07,626   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/4d/8c/6bd9d3e19308d8067cd828543720eb8a0635d24aef73d4bb635b7cc45eb1/biomaj_core-3.0.24-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,626   Found link https://files.pythonhosted.org/packages/26/bb/3ffc146a75e07df324ee51290ad1823fc5cb921a9e8abd47b8a634810b38/biomaj_core-3.0.24.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.24
2025-09-08T05:50:07,626   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/ed/f2/d57beba02d3d0d02fcec29b06c7b819ebf98811e5c67a859e11808d4ac32/biomaj_core-3.0.25-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,626   Found link https://files.pythonhosted.org/packages/d5/49/a8e2dd7fe038a64cff276df1ced10a936d8f46a4d38e64df0b23eed02fec/biomaj_core-3.0.25.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.25
2025-09-08T05:50:07,626   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/d5/c1/f22fc557c28df4696734c02fc0de7fc8a8d9596d0b958d9976d471ae6099/biomaj_core-3.0.26-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,626   Found link https://files.pythonhosted.org/packages/ef/54/9f65ecb436e5832cb8d957c40015defa296dd949ab59278e600e74442b87/biomaj_core-3.0.26.tar.gz (from https://pypi.org/simple/biomaj-core/), version: 3.0.26
2025-09-08T05:50:07,626   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/29/9c/9bf92bda01ae7611085a8da683285552bff4e8b129e74d0e5ec4b9cdc690/biomaj_core-3.0.27-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/)
2025-09-08T05:50:07,627   Skipping link: No binaries permitted for biomaj-core: https://files.pythonhosted.org/packages/9b/c8/33b23379f43e0e8b190c1484981f7e02da3838ba272ad711c8a9bbff3ad6/biomaj_core-3.0.28-py2.py3-none-any.whl (from https://pypi.org/simple/biomaj-core/) (requires-python:>=3)
2025-09-08T05:50:07,627 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomaj-core/
2025-09-08T05:50:07,627 Getting page https://www.piwheels.org/simple/biomaj-core/
2025-09-08T05:50:07,628 Found index url https://www.piwheels.org/simple/
2025-09-08T05:50:07,732 Fetched page https://www.piwheels.org/simple/biomaj-core/ as text/html
2025-09-08T05:50:07,736   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.26-py2.py3-none-any.whl#sha256=97a89683f2f577000809e87f077c64ba39c1cd5f6b7f1dc7e72783493240e7ce (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,736   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.25-py2.py3-none-any.whl#sha256=088d721bcd941cb6d8997bd274b0f586ca55293a1d2668a4b794765b36215cdb (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,736   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.24-py2.py3-none-any.whl#sha256=42417d00af9cf11f93d6c7d0129d57609a1afd3b98ec1c434409296cad1c75fd (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,737   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.23-py2.py3-none-any.whl#sha256=48158b853625db9fcd8343b828c9612319726c88870406ba79b9a40b5f8d9d30 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,737   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.21-py2.py3-none-any.whl#sha256=4e141cdc98bd68d46a867cb45745fa987be61b73f613e6bcfebb942ffcd58f16 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,737   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.20-py2.py3-none-any.whl#sha256=2fcbb1d1c6172b1c2f51df33c9e03148c3ad63aa117fdffd3061645a358c4817 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,737   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.19-py2.py3-none-any.whl#sha256=f47c2d1a7f09286cf7af696c633fb45207b1ae47dc16cd715c85e40745e07dfe (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,737   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.18-py2.py3-none-any.whl#sha256=16ef824953473802e48b65f63815c1d280af359ccb0de8926e9c50d5de00d9f6 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,737   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.17-py2.py3-none-any.whl#sha256=72400be853cea7d59de7b2896c7d30c2b0b15aca94f0531753a79f2c6400a600 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,737   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.16-py2.py3-none-any.whl#sha256=845df8629e84c1a81889b15f82322e9edb8aed81e8a54769caab1a55d5768664 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,737   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.15-py2.py3-none-any.whl#sha256=762f7d9278f1c7cefd95d1e5185898c16998dae31bfe5c785b7075b165f9b0f9 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,738   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.14-py2.py3-none-any.whl#sha256=50f4b8830120fd78747268e5ff99685d81438fc9ad1693e2ac09498c33966d55 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,738   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.13-py2.py3-none-any.whl#sha256=09e50a56bc92c77fe60a4fc314d5bd3b86dfa5d4fd219b40ad38d215d70ff247 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,738   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.12-py2.py3-none-any.whl#sha256=c307ee1020a0b702b17e635b1b36dd74413769a179810dc165e909b1343bd665 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,738   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.7-py2.py3-none-any.whl#sha256=26c7a196446d1c9e2c640fd06762ceae24afb52841922271b2564437f464d076 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,738   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.6-py2.py3-none-any.whl#sha256=09ab62641c7be921dca2f928c898ae726f2fea7dd97ef63801d9a1b421f31bb7 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,738   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.5-py3-none-any.whl#sha256=351ecc14f0ebec0ece991a0cc733dbcd1f9a0b1946df0c0379cd00fbe39083ad (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,738   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.4-py3-none-any.whl#sha256=72fcdc92428285046fb6e4946a532b078b09d092975e0bf58daf1a970a98701f (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,738   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.3-py3-none-any.whl#sha256=42b623d90518a6168c0d47dc8c84cd8d509967903f064b0768b80337c3e04102 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,739   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.2-py3-none-any.whl#sha256=85ae4335e08ebaee26b4c80b6cc937fcb21fc565d2a6693287ad794d3e68018a (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,739   Skipping link: No binaries permitted for biomaj-core: https://archive1.piwheels.org/simple/biomaj-core/biomaj_core-3.0.1-py3-none-any.whl#sha256=9c5cb1c2b74d60d8484305218c9cde08fdf01f93ecce76cb5181d2a18b46b947 (from https://www.piwheels.org/simple/biomaj-core/)
2025-09-08T05:50:07,739 Skipping link: not a file: https://www.piwheels.org/simple/biomaj-core/
2025-09-08T05:50:07,739 Skipping link: not a file: https://pypi.org/simple/biomaj-core/
2025-09-08T05:50:07,765 Given no hashes to check 1 links for project 'biomaj-core': discarding no candidates
2025-09-08T05:50:07,766 Collecting biomaj-core==3.0.0
2025-09-08T05:50:07,767   Created temporary directory: /tmp/pip-unpack-751y5jh8
2025-09-08T05:50:07,902   Downloading biomaj_core-3.0.0.tar.gz (7.0 kB)
2025-09-08T05:50:07,923   Added biomaj-core==3.0.0 from https://files.pythonhosted.org/packages/37/bb/918493436f50a351579f4aa4637fb6920dba06e6ce8f041b7defbf60b220/biomaj_core-3.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-_c8rrk9n'
2025-09-08T05:50:07,925   Running setup.py (path:/tmp/pip-wheel-b3yfkd51/biomaj-core_de074727f9014c5a8664a94592bd1f73/setup.py) egg_info for package biomaj-core
2025-09-08T05:50:07,925   Created temporary directory: /tmp/pip-pip-egg-info-pkg8lho1
2025-09-08T05:50:07,925   Preparing metadata (setup.py): started
2025-09-08T05:50:07,926   Running command python setup.py egg_info
2025-09-08T05:50:08,428   Traceback (most recent call last):
2025-09-08T05:50:08,429     File "<string>", line 2, in <module>
2025-09-08T05:50:08,429       exec(compile('''
2025-09-08T05:50:08,429       ~~~~^^^^^^^^^^^^
2025-09-08T05:50:08,429       # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2025-09-08T05:50:08,430       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,430       ...<32 lines>...
2025-09-08T05:50:08,430       exec(compile(setup_py_code, filename, "exec"))
2025-09-08T05:50:08,430       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,430       ''' % ('/tmp/pip-wheel-b3yfkd51/biomaj-core_de074727f9014c5a8664a94592bd1f73/setup.py',), "<pip-setuptools-caller>", "exec"))
2025-09-08T05:50:08,430       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,430     File "<pip-setuptools-caller>", line 35, in <module>
2025-09-08T05:50:08,430     File "/tmp/pip-wheel-b3yfkd51/biomaj-core_de074727f9014c5a8664a94592bd1f73/setup.py", line 11, in <module>
2025-09-08T05:50:08,431       with open(os.path.join(here, 'README.md')) as f:
2025-09-08T05:50:08,431            ~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,431   FileNotFoundError: [Errno 2] No such file or directory: '/tmp/pip-wheel-b3yfkd51/biomaj-core_de074727f9014c5a8664a94592bd1f73/README.md'
2025-09-08T05:50:08,514   ERROR: python setup.py egg_info exited with 1
2025-09-08T05:50:08,526   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2025-09-08T05:50:08,526   exec(compile('"'"''"'"''"'"'
2025-09-08T05:50:08,526   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2025-09-08T05:50:08,526   #
2025-09-08T05:50:08,526   # - It imports setuptools before invoking setup.py, to enable projects that directly
2025-09-08T05:50:08,526   #   import from `distutils.core` to work with newer packaging standards.
2025-09-08T05:50:08,526   # - It provides a clear error message when setuptools is not installed.
2025-09-08T05:50:08,526   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2025-09-08T05:50:08,526   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2025-09-08T05:50:08,526   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2025-09-08T05:50:08,526   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2025-09-08T05:50:08,526   import os, sys, tokenize, traceback
2025-09-08T05:50:08,526   
2025-09-08T05:50:08,526   try:
2025-09-08T05:50:08,526       import setuptools
2025-09-08T05:50:08,526   except ImportError:
2025-09-08T05:50:08,526       print(
2025-09-08T05:50:08,526           "ERROR: Can not execute `setup.py` since setuptools failed to import in "
2025-09-08T05:50:08,526           "the build environment with exception:",
2025-09-08T05:50:08,526           file=sys.stderr,
2025-09-08T05:50:08,526       )
2025-09-08T05:50:08,526       traceback.print_exc()
2025-09-08T05:50:08,526       sys.exit(1)
2025-09-08T05:50:08,526   
2025-09-08T05:50:08,526   __file__ = %r
2025-09-08T05:50:08,526   sys.argv[0] = __file__
2025-09-08T05:50:08,526   
2025-09-08T05:50:08,526   if os.path.exists(__file__):
2025-09-08T05:50:08,526       filename = __file__
2025-09-08T05:50:08,526       with tokenize.open(__file__) as f:
2025-09-08T05:50:08,526           setup_py_code = f.read()
2025-09-08T05:50:08,526   else:
2025-09-08T05:50:08,526       filename = "<auto-generated setuptools caller>"
2025-09-08T05:50:08,526       setup_py_code = "from setuptools import setup; setup()"
2025-09-08T05:50:08,526   
2025-09-08T05:50:08,526   exec(compile(setup_py_code, filename, "exec"))
2025-09-08T05:50:08,526   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-b3yfkd51/biomaj-core_de074727f9014c5a8664a94592bd1f73/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-pkg8lho1[/]
2025-09-08T05:50:08,526   [bold magenta]cwd[/]: /tmp/pip-wheel-b3yfkd51/biomaj-core_de074727f9014c5a8664a94592bd1f73/
2025-09-08T05:50:08,526   Preparing metadata (setup.py): finished with status 'error'
2025-09-08T05:50:08,527 ERROR: metadata generation failed
2025-09-08T05:50:08,532 Exception information:
2025-09-08T05:50:08,532 Traceback (most recent call last):
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata
2025-09-08T05:50:08,532     call_subprocess(
2025-09-08T05:50:08,532     ~~~~~~~~~~~~~~~^
2025-09-08T05:50:08,532         args,
2025-09-08T05:50:08,532         ^^^^^
2025-09-08T05:50:08,532     ...<2 lines>...
2025-09-08T05:50:08,532         spinner=spinner,
2025-09-08T05:50:08,532         ^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532     )
2025-09-08T05:50:08,532     ^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess
2025-09-08T05:50:08,532     raise error
2025-09-08T05:50:08,532 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2025-09-08T05:50:08,532 
2025-09-08T05:50:08,532 The above exception was the direct cause of the following exception:
2025-09-08T05:50:08,532 
2025-09-08T05:50:08,532 Traceback (most recent call last):
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper
2025-09-08T05:50:08,532     status = _inner_run()
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run
2025-09-08T05:50:08,532     return self.run(options, args)
2025-09-08T05:50:08,532            ~~~~~~~~^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper
2025-09-08T05:50:08,532     return func(self, options, args)
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2025-09-08T05:50:08,532     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve
2025-09-08T05:50:08,532     result = self._result = resolver.resolve(
2025-09-08T05:50:08,532                             ~~~~~~~~~~~~~~~~^
2025-09-08T05:50:08,532         collected.requirements, max_rounds=limit_how_complex_resolution_can_be
2025-09-08T05:50:08,532         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532     )
2025-09-08T05:50:08,532     ^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve
2025-09-08T05:50:08,532     state = resolution.resolve(requirements, max_rounds=max_rounds)
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve
2025-09-08T05:50:08,532     self._add_to_criteria(self.state.criteria, r, parent=None)
2025-09-08T05:50:08,532     ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria
2025-09-08T05:50:08,532     if not criterion.candidates:
2025-09-08T05:50:08,532            ^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__
2025-09-08T05:50:08,532     return bool(self._sequence)
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__
2025-09-08T05:50:08,532     self._bool = any(self)
2025-09-08T05:50:08,532                  ~~~^^^^^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in <genexpr>
2025-09-08T05:50:08,532     return (c for c in iterator if id(c) not in self._incompatible_ids)
2025-09-08T05:50:08,532                        ^^^^^^^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built
2025-09-08T05:50:08,532     candidate = func()
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link
2025-09-08T05:50:08,532     base: Optional[BaseCandidate] = self._make_base_candidate_from_link(
2025-09-08T05:50:08,532                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
2025-09-08T05:50:08,532         link, template, name, version
2025-09-08T05:50:08,532         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532     )
2025-09-08T05:50:08,532     ^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link
2025-09-08T05:50:08,532     self._link_candidate_cache[link] = LinkCandidate(
2025-09-08T05:50:08,532                                        ~~~~~~~~~~~~~^
2025-09-08T05:50:08,532         link,
2025-09-08T05:50:08,532         ^^^^^
2025-09-08T05:50:08,532     ...<3 lines>...
2025-09-08T05:50:08,532         version=version,
2025-09-08T05:50:08,532         ^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532     )
2025-09-08T05:50:08,532     ^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__
2025-09-08T05:50:08,532     super().__init__(
2025-09-08T05:50:08,532     ~~~~~~~~~~~~~~~~^
2025-09-08T05:50:08,532         link=link,
2025-09-08T05:50:08,532         ^^^^^^^^^^
2025-09-08T05:50:08,532     ...<4 lines>...
2025-09-08T05:50:08,532         version=version,
2025-09-08T05:50:08,532         ^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532     )
2025-09-08T05:50:08,532     ^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__
2025-09-08T05:50:08,532     self.dist = self._prepare()
2025-09-08T05:50:08,532                 ~~~~~~~~~~~~~^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare
2025-09-08T05:50:08,532     dist = self._prepare_distribution()
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution
2025-09-08T05:50:08,532     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2025-09-08T05:50:08,532            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement
2025-09-08T05:50:08,532     return self._prepare_linked_requirement(req, parallel_builds)
2025-09-08T05:50:08,532            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement
2025-09-08T05:50:08,532     dist = _get_prepared_distribution(
2025-09-08T05:50:08,532         req,
2025-09-08T05:50:08,532     ...<3 lines>...
2025-09-08T05:50:08,532         self.check_build_deps,
2025-09-08T05:50:08,532     )
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution
2025-09-08T05:50:08,532     abstract_dist.prepare_distribution_metadata(
2025-09-08T05:50:08,532     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
2025-09-08T05:50:08,532         finder, build_isolation, check_build_deps
2025-09-08T05:50:08,532         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532     )
2025-09-08T05:50:08,532     ^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata
2025-09-08T05:50:08,532     self.req.prepare_metadata()
2025-09-08T05:50:08,532     ~~~~~~~~~~~~~~~~~~~~~~~~~^^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata
2025-09-08T05:50:08,532     self.metadata_directory = generate_metadata_legacy(
2025-09-08T05:50:08,532                               ~~~~~~~~~~~~~~~~~~~~~~~~^
2025-09-08T05:50:08,532         build_env=self.build_env,
2025-09-08T05:50:08,532         ^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532     ...<3 lines>...
2025-09-08T05:50:08,532         details=details,
2025-09-08T05:50:08,532         ^^^^^^^^^^^^^^^^
2025-09-08T05:50:08,532     )
2025-09-08T05:50:08,532     ^
2025-09-08T05:50:08,532   File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata
2025-09-08T05:50:08,532     raise MetadataGenerationFailed(package_details=details) from error
2025-09-08T05:50:08,532 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2025-09-08T05:50:08,552 Removed biomaj-core==3.0.0 from https://files.pythonhosted.org/packages/37/bb/918493436f50a351579f4aa4637fb6920dba06e6ce8f041b7defbf60b220/biomaj_core-3.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-_c8rrk9n'
2025-09-08T05:50:08,552 Removed build tracker: '/tmp/pip-build-tracker-_c8rrk9n'