2025-09-08T06:07:34,337 Created temporary directory: /tmp/pip-build-tracker-jnvz0w2z 2025-09-08T06:07:34,337 Initialized build tracking at /tmp/pip-build-tracker-jnvz0w2z 2025-09-08T06:07:34,338 Created build tracker: /tmp/pip-build-tracker-jnvz0w2z 2025-09-08T06:07:34,338 Entered build tracker: /tmp/pip-build-tracker-jnvz0w2z 2025-09-08T06:07:34,338 Created temporary directory: /tmp/pip-wheel-85o5a_jp 2025-09-08T06:07:34,341 Created temporary directory: /tmp/pip-ephem-wheel-cache-797rrmly 2025-09-08T06:07:34,399 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T06:07:34,402 2 location(s) to search for versions of pygfl: 2025-09-08T06:07:34,402 * https://pypi.org/simple/pygfl/ 2025-09-08T06:07:34,402 * https://www.piwheels.org/simple/pygfl/ 2025-09-08T06:07:34,402 Fetching project page and analyzing links: https://pypi.org/simple/pygfl/ 2025-09-08T06:07:34,402 Getting page https://pypi.org/simple/pygfl/ 2025-09-08T06:07:34,403 Found index url https://pypi.org/simple/ 2025-09-08T06:07:34,473 Fetched page https://pypi.org/simple/pygfl/ as application/vnd.pypi.simple.v1+json 2025-09-08T06:07:34,474 Skipping link: No binaries permitted for pygfl: https://files.pythonhosted.org/packages/5c/d1/9517b950c40ee407ab2760a0d9bcabda5f55c6118960b7b93892dc9b0bb3/pygfl-1.0.0-cp27-none-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pygfl/) 2025-09-08T06:07:34,474 Found link https://files.pythonhosted.org/packages/86/53/dfc2e4ad8bee3bad7edae8fdbccaa606e585cfa3280c63d41b87a9e020b8/pygfl-1.0.0.tar.gz (from https://pypi.org/simple/pygfl/), version: 1.0.0 2025-09-08T06:07:34,474 Skipping link: No binaries permitted for pygfl: https://files.pythonhosted.org/packages/3c/58/7bcf034ae5a55cb8faee18e7264edcd9ddaafb3549afb2de166bbec8e6b3/pygfl-1.0.1-cp27-none-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pygfl/) 2025-09-08T06:07:34,474 Skipping link: No binaries permitted for pygfl: https://files.pythonhosted.org/packages/80/09/f5fa21244a850ae3971524119613965e8ad63313696d8a11a080e6ea8910/pygfl-1.0.2-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pygfl/) 2025-09-08T06:07:34,475 Found link https://files.pythonhosted.org/packages/52/c0/31de6d69d71e98a6eccc2c8956abfbfa2926c50ddcbeaa8c2bd850ce0c9d/pygfl-1.0.2.tar.gz (from https://pypi.org/simple/pygfl/), version: 1.0.2 2025-09-08T06:07:34,475 Fetching project page and analyzing links: https://www.piwheels.org/simple/pygfl/ 2025-09-08T06:07:34,475 Getting page https://www.piwheels.org/simple/pygfl/ 2025-09-08T06:07:34,476 Found index url https://www.piwheels.org/simple/ 2025-09-08T06:07:34,567 Fetched page https://www.piwheels.org/simple/pygfl/ as text/html 2025-09-08T06:07:34,568 Skipping link: not a file: https://www.piwheels.org/simple/pygfl/ 2025-09-08T06:07:34,569 Skipping link: not a file: https://pypi.org/simple/pygfl/ 2025-09-08T06:07:34,594 Given no hashes to check 1 links for project 'pygfl': discarding no candidates 2025-09-08T06:07:34,595 Collecting pygfl==1.0.2 2025-09-08T06:07:34,597 Created temporary directory: /tmp/pip-unpack-wyi9t_4n 2025-09-08T06:07:34,737 Downloading pygfl-1.0.2.tar.gz (245 kB) 2025-09-08T06:07:34,816 Added pygfl==1.0.2 from https://files.pythonhosted.org/packages/52/c0/31de6d69d71e98a6eccc2c8956abfbfa2926c50ddcbeaa8c2bd850ce0c9d/pygfl-1.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-jnvz0w2z' 2025-09-08T06:07:34,817 Running setup.py (path:/tmp/pip-wheel-85o5a_jp/pygfl_8e8a1a3b408248beafae1889ca3e1475/setup.py) egg_info for package pygfl 2025-09-08T06:07:34,817 Created temporary directory: /tmp/pip-pip-egg-info-fpsif52p 2025-09-08T06:07:34,817 Preparing metadata (setup.py): started 2025-09-08T06:07:34,818 Running command python setup.py egg_info 2025-09-08T06:07:35,888 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T06:07:35,888 !! 2025-09-08T06:07:35,888 ******************************************************************************** 2025-09-08T06:07:35,888 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T06:07:35,888 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T06:07:35,889 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T06:07:35,889 ******************************************************************************** 2025-09-08T06:07:35,889 !! 2025-09-08T06:07:35,889 self._finalize_license_expression() 2025-09-08T06:07:35,975 running egg_info 2025-09-08T06:07:36,051 creating /tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info 2025-09-08T06:07:36,051 writing /tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info/PKG-INFO 2025-09-08T06:07:36,052 writing dependency_links to /tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info/dependency_links.txt 2025-09-08T06:07:36,053 writing entry points to /tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info/entry_points.txt 2025-09-08T06:07:36,053 writing requirements to /tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info/requires.txt 2025-09-08T06:07:36,054 writing top-level names to /tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info/top_level.txt 2025-09-08T06:07:36,054 writing manifest file '/tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info/SOURCES.txt' 2025-09-08T06:07:36,354 reading manifest file '/tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info/SOURCES.txt' 2025-09-08T06:07:36,355 reading manifest template 'MANIFEST.in' 2025-09-08T06:07:36,356 adding license file 'COPYING' 2025-09-08T06:07:36,356 adding license file 'COPYING.LESSER' 2025-09-08T06:07:36,358 writing manifest file '/tmp/pip-pip-egg-info-fpsif52p/pygfl.egg-info/SOURCES.txt' 2025-09-08T06:07:36,471 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T06:07:36,476 Source in /tmp/pip-wheel-85o5a_jp/pygfl_8e8a1a3b408248beafae1889ca3e1475 has version 1.0.2, which satisfies requirement pygfl==1.0.2 from https://files.pythonhosted.org/packages/52/c0/31de6d69d71e98a6eccc2c8956abfbfa2926c50ddcbeaa8c2bd850ce0c9d/pygfl-1.0.2.tar.gz 2025-09-08T06:07:36,476 Removed pygfl==1.0.2 from https://files.pythonhosted.org/packages/52/c0/31de6d69d71e98a6eccc2c8956abfbfa2926c50ddcbeaa8c2bd850ce0c9d/pygfl-1.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-jnvz0w2z' 2025-09-08T06:07:36,480 Created temporary directory: /tmp/pip-unpack-auw3ig6b 2025-09-08T06:07:36,481 Created temporary directory: /tmp/pip-unpack-b3qj5j4l 2025-09-08T06:07:36,481 Building wheels for collected packages: pygfl 2025-09-08T06:07:36,482 Created temporary directory: /tmp/pip-wheel-3iku_xv4 2025-09-08T06:07:36,483 DEPRECATION: Building 'pygfl' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'pygfl'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T06:07:36,484 Building wheel for pygfl (setup.py): started 2025-09-08T06:07:36,484 Destination directory: /tmp/pip-wheel-3iku_xv4 2025-09-08T06:07:36,484 Running command python setup.py bdist_wheel 2025-09-08T06:07:37,569 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T06:07:37,569 !! 2025-09-08T06:07:37,569 ******************************************************************************** 2025-09-08T06:07:37,569 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T06:07:37,569 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T06:07:37,569 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T06:07:37,570 ******************************************************************************** 2025-09-08T06:07:37,570 !! 2025-09-08T06:07:37,570 self._finalize_license_expression() 2025-09-08T06:07:37,570 running bdist_wheel 2025-09-08T06:07:37,791 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated 2025-09-08T06:07:37,791 !! 2025-09-08T06:07:37,793 ******************************************************************************** 2025-09-08T06:07:37,793 With Python 2.7 end-of-life, support for building universal wheels 2025-09-08T06:07:37,793 (i.e., wheels that support both Python 2 and Python 3) 2025-09-08T06:07:37,793 is being obviated. 2025-09-08T06:07:37,793 Please discontinue using this option, or if you still need it, 2025-09-08T06:07:37,793 file an issue with pypa/setuptools describing your use case. 2025-09-08T06:07:37,793 This deprecation is overdue, please update your project and remove deprecated 2025-09-08T06:07:37,794 calls to avoid build errors in the future. 2025-09-08T06:07:37,794 ******************************************************************************** 2025-09-08T06:07:37,794 !! 2025-09-08T06:07:37,794 self.finalize_options() 2025-09-08T06:07:37,948 running build 2025-09-08T06:07:37,949 running build_py 2025-09-08T06:07:38,026 creating build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,026 copying pygfl/utils.py -> build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,027 copying pygfl/trendfiltering.py -> build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,027 copying pygfl/trails.py -> build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,028 copying pygfl/solver.py -> build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,028 copying pygfl/easy.py -> build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,029 copying pygfl/density.py -> build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,029 copying pygfl/bayes.py -> build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,030 copying pygfl/__init__.py -> build/lib.linux-armv7l-cpython-313/pygfl 2025-09-08T06:07:38,031 running build_ext 2025-09-08T06:07:38,385 building 'libgraphfl' extension 2025-09-08T06:07:38,387 creating build/temp.linux-armv7l-cpython-313/cpp/src 2025-09-08T06:07:38,388 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Icpp/include/ -I/usr/include/python3.13 -c cpp/src/bayes_gfl.c -o build/temp.linux-armv7l-cpython-313/cpp/src/bayes_gfl.o 2025-09-08T06:07:38,431 cpp/src/bayes_gfl.c:20:11: fatal error: bayes_gfl.h: No such file or directory 2025-09-08T06:07:38,431 20 | #include "bayes_gfl.h" 2025-09-08T06:07:38,431 | ^~~~~~~~~~~~~ 2025-09-08T06:07:38,432 compilation terminated. 2025-09-08T06:07:38,434 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-08T06:07:38,586 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T06:07:38,599 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T06:07:38,599 exec(compile('"'"''"'"''"'"' 2025-09-08T06:07:38,599 # This is -- a caller that pip uses to run setup.py 2025-09-08T06:07:38,599 # 2025-09-08T06:07:38,599 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T06:07:38,599 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T06:07:38,599 # - It provides a clear error message when setuptools is not installed. 2025-09-08T06:07:38,599 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T06:07:38,599 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T06:07:38,599 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T06:07:38,599 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T06:07:38,599 import os, sys, tokenize, traceback 2025-09-08T06:07:38,599 2025-09-08T06:07:38,599 try: 2025-09-08T06:07:38,599 import setuptools 2025-09-08T06:07:38,599 except ImportError: 2025-09-08T06:07:38,599 print( 2025-09-08T06:07:38,599 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T06:07:38,599 "the build environment with exception:", 2025-09-08T06:07:38,599 file=sys.stderr, 2025-09-08T06:07:38,599 ) 2025-09-08T06:07:38,599 traceback.print_exc() 2025-09-08T06:07:38,599 sys.exit(1) 2025-09-08T06:07:38,599 2025-09-08T06:07:38,599 __file__ = %r 2025-09-08T06:07:38,599 sys.argv[0] = __file__ 2025-09-08T06:07:38,599 2025-09-08T06:07:38,599 if os.path.exists(__file__): 2025-09-08T06:07:38,599 filename = __file__ 2025-09-08T06:07:38,599 with tokenize.open(__file__) as f: 2025-09-08T06:07:38,599 setup_py_code = f.read() 2025-09-08T06:07:38,599 else: 2025-09-08T06:07:38,599 filename = "" 2025-09-08T06:07:38,599 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T06:07:38,599 2025-09-08T06:07:38,599 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T06:07:38,599 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-85o5a_jp/pygfl_8e8a1a3b408248beafae1889ca3e1475/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-3iku_xv4[/] 2025-09-08T06:07:38,599 [bold magenta]cwd[/]: /tmp/pip-wheel-85o5a_jp/pygfl_8e8a1a3b408248beafae1889ca3e1475/ 2025-09-08T06:07:38,599 Building wheel for pygfl (setup.py): finished with status 'error' 2025-09-08T06:07:38,600 ERROR: Failed building wheel for pygfl 2025-09-08T06:07:38,601 Running setup.py clean for pygfl 2025-09-08T06:07:38,602 Running command python setup.py clean 2025-09-08T06:07:39,678 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T06:07:39,678 !! 2025-09-08T06:07:39,678 ******************************************************************************** 2025-09-08T06:07:39,678 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T06:07:39,679 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T06:07:39,679 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T06:07:39,679 ******************************************************************************** 2025-09-08T06:07:39,679 !! 2025-09-08T06:07:39,679 self._finalize_license_expression() 2025-09-08T06:07:39,754 running clean 2025-09-08T06:07:39,899 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T06:07:39,899 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T06:07:39,900 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T06:07:39,900 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T06:07:39,900 removing 'build' 2025-09-08T06:07:40,012 Failed to build pygfl 2025-09-08T06:07:40,013 ERROR: Failed to build one or more wheels 2025-09-08T06:07:40,014 Exception information: 2025-09-08T06:07:40,014 Traceback (most recent call last): 2025-09-08T06:07:40,014 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T06:07:40,014 status = _inner_run() 2025-09-08T06:07:40,014 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T06:07:40,014 return self.run(options, args) 2025-09-08T06:07:40,014 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T06:07:40,014 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T06:07:40,014 return func(self, options, args) 2025-09-08T06:07:40,014 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T06:07:40,014 raise CommandError("Failed to build one or more wheels") 2025-09-08T06:07:40,014 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T06:07:40,018 Removed build tracker: '/tmp/pip-build-tracker-jnvz0w2z'