2025-09-08T06:10:15,689 Created temporary directory: /tmp/pip-build-tracker-dt90u8x9 2025-09-08T06:10:15,690 Initialized build tracking at /tmp/pip-build-tracker-dt90u8x9 2025-09-08T06:10:15,690 Created build tracker: /tmp/pip-build-tracker-dt90u8x9 2025-09-08T06:10:15,690 Entered build tracker: /tmp/pip-build-tracker-dt90u8x9 2025-09-08T06:10:15,690 Created temporary directory: /tmp/pip-wheel-av3of_hs 2025-09-08T06:10:15,694 Created temporary directory: /tmp/pip-ephem-wheel-cache-ex0y9pet 2025-09-08T06:10:15,751 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T06:10:15,753 2 location(s) to search for versions of probabilistic2020: 2025-09-08T06:10:15,753 * https://pypi.org/simple/probabilistic2020/ 2025-09-08T06:10:15,753 * https://www.piwheels.org/simple/probabilistic2020/ 2025-09-08T06:10:15,753 Fetching project page and analyzing links: https://pypi.org/simple/probabilistic2020/ 2025-09-08T06:10:15,754 Getting page https://pypi.org/simple/probabilistic2020/ 2025-09-08T06:10:15,755 Found index url https://pypi.org/simple/ 2025-09-08T06:10:15,828 Fetched page https://pypi.org/simple/probabilistic2020/ as application/vnd.pypi.simple.v1+json 2025-09-08T06:10:15,831 Found link https://files.pythonhosted.org/packages/fa/48/119e543efc590b5373a68dcb704f2b52df46a73746d5835c4f2c61b53e27/probabilistic2020-1.0.0.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.0.0 2025-09-08T06:10:15,831 Found link https://files.pythonhosted.org/packages/2e/00/5c9a5fe6050e17f4974d14df400ae7e93a62e8b37371b33af4f2e1a4c8f5/probabilistic2020-1.0.1.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.0.1 2025-09-08T06:10:15,831 Found link https://files.pythonhosted.org/packages/a0/b7/7879eb08ab3a4c3f630deb37b705a12074880afa7f0b8f7ad9c611cbeb50/probabilistic2020-1.0.2.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.0.2 2025-09-08T06:10:15,831 Found link https://files.pythonhosted.org/packages/dc/60/e3cb0c222d9f2a4fba7cfe9aa180095e689eda05ff5315201176c0f0813e/probabilistic2020-1.0.3.post1.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.0.3.post1 2025-09-08T06:10:15,832 Found link https://files.pythonhosted.org/packages/b3/8b/d9a2de8ccb78f50bb9c2107a39b645472e156ef2b53bf7edea89ed243b4c/probabilistic2020-1.0.4.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.0.4 2025-09-08T06:10:15,832 Found link https://files.pythonhosted.org/packages/b8/50/de8d0ec282eb853467b5d01df38bc34b654a55349bfeca92744b1af51659/probabilistic2020-1.0.5.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.0.5 2025-09-08T06:10:15,832 Found link https://files.pythonhosted.org/packages/42/3c/41a788891b605cbace92168f2e2048cc30f89e9ae74c8fb79eb58227987a/probabilistic2020-1.0.6.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.0.6 2025-09-08T06:10:15,832 Found link https://files.pythonhosted.org/packages/ba/85/aeb7d2b0a42d2572bef16ec4b54ab19025b14939f5d266319b88c9253f5a/probabilistic2020-1.0.7.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.0.7 2025-09-08T06:10:15,833 Found link https://files.pythonhosted.org/packages/41/d7/a142a18c9676a20c5f309c027c39779f1e312f44af98a04c301d9862c6fb/probabilistic2020-1.1.0.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.1.0 2025-09-08T06:10:15,833 Found link https://files.pythonhosted.org/packages/96/5b/4a1b571cdf716507dc83b4b763df3b09a5def7562814d7aef8364ca5d270/probabilistic2020-1.1.1.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.1.1 2025-09-08T06:10:15,833 Found link https://files.pythonhosted.org/packages/30/ff/feae37090012be833521cf374700b1609d102fd3dfa8b5690ee657c9708f/probabilistic2020-1.2.0.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.2.0 2025-09-08T06:10:15,833 Found link https://files.pythonhosted.org/packages/ab/e3/41b006a57ddc39d0d598212f83eb4a31319839b0b2d1551c1747d9da83a2/probabilistic2020-1.2.1.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.2.1 2025-09-08T06:10:15,833 Found link https://files.pythonhosted.org/packages/31/27/d1769ce84e6d067a5d3bc3c3f97fd6367dbbaf21ef67678cc44bb2681778/probabilistic2020-1.2.2.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.2.2 2025-09-08T06:10:15,834 Found link https://files.pythonhosted.org/packages/d7/58/32b490f92ab7a44a8ea617134ca5666a53e167634fa7c82d445a861577d1/probabilistic2020-1.2.3.tar.gz (from https://pypi.org/simple/probabilistic2020/), version: 1.2.3 2025-09-08T06:10:15,834 Fetching project page and analyzing links: https://www.piwheels.org/simple/probabilistic2020/ 2025-09-08T06:10:15,834 Getting page https://www.piwheels.org/simple/probabilistic2020/ 2025-09-08T06:10:15,835 Found index url https://www.piwheels.org/simple/ 2025-09-08T06:10:15,934 Fetched page https://www.piwheels.org/simple/probabilistic2020/ as text/html 2025-09-08T06:10:15,941 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.3-cp34-cp34m-linux_armv7l.whl#sha256=d259e3cf96214329e349d38c6b7718430ec670ddb0b183ad9daa218213dd7c44 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,941 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.3-cp34-cp34m-linux_armv6l.whl#sha256=d259e3cf96214329e349d38c6b7718430ec670ddb0b183ad9daa218213dd7c44 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,941 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.3-cp35-cp35m-linux_armv7l.whl#sha256=835827338b8e03ccc5203b2211af245e34efc9d0598fbd4f03ddbceb3c383836 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,941 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.3-cp35-cp35m-linux_armv6l.whl#sha256=835827338b8e03ccc5203b2211af245e34efc9d0598fbd4f03ddbceb3c383836 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,942 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.3-cp37-cp37m-linux_armv6l.whl#sha256=bd0bccd37d87683de0b081f70ae2f4b2c9a201eb25b0c1503fd333f879e32f96 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,942 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.3-cp37-cp37m-linux_armv7l.whl#sha256=bd0bccd37d87683de0b081f70ae2f4b2c9a201eb25b0c1503fd333f879e32f96 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,942 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.2-cp37-cp37m-linux_armv7l.whl#sha256=49d30cdb2956719690052f4c99bf60cd9dba5e6de20d4c64bab18a7c7313bebd (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,942 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.2-cp37-cp37m-linux_armv6l.whl#sha256=49d30cdb2956719690052f4c99bf60cd9dba5e6de20d4c64bab18a7c7313bebd (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,942 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.2-cp34-cp34m-linux_armv6l.whl#sha256=01ff0304774c3c6a469ed49680deb34e7b910ab25d544c669ec296ba39c40178 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,942 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.2-cp34-cp34m-linux_armv7l.whl#sha256=01ff0304774c3c6a469ed49680deb34e7b910ab25d544c669ec296ba39c40178 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,942 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.2-cp35-cp35m-linux_armv7l.whl#sha256=736500cea5b5bc11377c038bda2b78d3f829fa3fd3758c87c494a3211451c689 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,942 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.2-cp35-cp35m-linux_armv6l.whl#sha256=736500cea5b5bc11377c038bda2b78d3f829fa3fd3758c87c494a3211451c689 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,943 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.1-cp34-cp34m-linux_armv7l.whl#sha256=c14cba94747ed47eff569c6f24e9ceaf239096445ede3701271ac819534fc98f (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,943 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.1-cp34-cp34m-linux_armv6l.whl#sha256=c14cba94747ed47eff569c6f24e9ceaf239096445ede3701271ac819534fc98f (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,943 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.1-cp35-cp35m-linux_armv7l.whl#sha256=d5e462020f360c4bbdf9cad787125b16bf1437ece54f6fb2a2f81042ae831f92 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,943 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.1-cp35-cp35m-linux_armv6l.whl#sha256=d5e462020f360c4bbdf9cad787125b16bf1437ece54f6fb2a2f81042ae831f92 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,943 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=c56e145d65ecbb89359df832000f94341a11a0147ea80a3869ab56fbab845d40 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,943 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=c56e145d65ecbb89359df832000f94341a11a0147ea80a3869ab56fbab845d40 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,943 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.1.1-cp34-cp34m-linux_armv7l.whl#sha256=0724b22d7a881975d589e46e30b4d3f7aaf3be7ac4b8215dc447753a0cbd3d1c (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,943 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.1.1-cp34-cp34m-linux_armv6l.whl#sha256=0724b22d7a881975d589e46e30b4d3f7aaf3be7ac4b8215dc447753a0cbd3d1c (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,944 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=a78d9cf13f819d236ca225ea1d10323f1ff57930eaecbfe615d7b2f92ca74489 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,944 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=a78d9cf13f819d236ca225ea1d10323f1ff57930eaecbfe615d7b2f92ca74489 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,944 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.7-cp34-cp34m-linux_armv7l.whl#sha256=54bd1e6b0a09e976a24cadbae005830850c2cae541c591cb84b857a758d006a1 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,944 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.7-cp34-cp34m-linux_armv6l.whl#sha256=54bd1e6b0a09e976a24cadbae005830850c2cae541c591cb84b857a758d006a1 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,944 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.6-cp34-cp34m-linux_armv7l.whl#sha256=228a0644eed9693a9e489deab8f42c7e8ccaf69929ffdab8918bd547b79126da (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,944 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.6-cp34-cp34m-linux_armv6l.whl#sha256=228a0644eed9693a9e489deab8f42c7e8ccaf69929ffdab8918bd547b79126da (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,944 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.5-cp34-cp34m-linux_armv7l.whl#sha256=bfddb1887143f3128bdd4300b6f4bae8cc16e7af522480632d1da3889975053d (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,945 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.5-cp34-cp34m-linux_armv6l.whl#sha256=bfddb1887143f3128bdd4300b6f4bae8cc16e7af522480632d1da3889975053d (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,945 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.4-cp34-cp34m-linux_armv7l.whl#sha256=a120b528f7f1d5301d6f4878b1fa6bfabce4cc8a02ac2f88b2d02ceef3329619 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,945 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.4-cp34-cp34m-linux_armv6l.whl#sha256=a120b528f7f1d5301d6f4878b1fa6bfabce4cc8a02ac2f88b2d02ceef3329619 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,945 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.2-cp34-cp34m-linux_armv7l.whl#sha256=e803a122d618df4affe98fd3ad6257a81942114821894ce15fbb7c3345b4f4a6 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,945 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.2-cp34-cp34m-linux_armv6l.whl#sha256=e803a122d618df4affe98fd3ad6257a81942114821894ce15fbb7c3345b4f4a6 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,945 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.1-cp34-cp34m-linux_armv7l.whl#sha256=a4214a962fc19569a727d9bc1f1479c4fe2927caa61ab0b940b3a9bda7d202a1 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,945 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.1-cp34-cp34m-linux_armv6l.whl#sha256=a4214a962fc19569a727d9bc1f1479c4fe2927caa61ab0b940b3a9bda7d202a1 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,945 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.0-cp34-cp34m-linux_armv7l.whl#sha256=71683255249f266fb0b1990e0d7fe1c83d3bfaff6a9c267e4e7be4fed2e76307 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,946 Skipping link: No binaries permitted for probabilistic2020: https://archive1.piwheels.org/simple/probabilistic2020/probabilistic2020-1.0.0-cp34-cp34m-linux_armv6l.whl#sha256=71683255249f266fb0b1990e0d7fe1c83d3bfaff6a9c267e4e7be4fed2e76307 (from https://www.piwheels.org/simple/probabilistic2020/) 2025-09-08T06:10:15,946 Skipping link: not a file: https://www.piwheels.org/simple/probabilistic2020/ 2025-09-08T06:10:15,946 Skipping link: not a file: https://pypi.org/simple/probabilistic2020/ 2025-09-08T06:10:15,972 Given no hashes to check 1 links for project 'probabilistic2020': discarding no candidates 2025-09-08T06:10:15,973 Collecting probabilistic2020==1.0.6 2025-09-08T06:10:15,974 Created temporary directory: /tmp/pip-unpack-qc_msbwc 2025-09-08T06:10:16,257 Downloading probabilistic2020-1.0.6.tar.gz (411 kB) 2025-09-08T06:10:16,384 Added probabilistic2020==1.0.6 from https://files.pythonhosted.org/packages/42/3c/41a788891b605cbace92168f2e2048cc30f89e9ae74c8fb79eb58227987a/probabilistic2020-1.0.6.tar.gz to build tracker '/tmp/pip-build-tracker-dt90u8x9' 2025-09-08T06:10:16,385 Running setup.py (path:/tmp/pip-wheel-av3of_hs/probabilistic2020_7d4ad61776b245fcab264fc5aaf0731e/setup.py) egg_info for package probabilistic2020 2025-09-08T06:10:16,386 Created temporary directory: /tmp/pip-pip-egg-info-b8me9zqy 2025-09-08T06:10:16,386 Preparing metadata (setup.py): started 2025-09-08T06:10:16,387 Running command python setup.py egg_info 2025-09-08T06:10:17,716 running egg_info 2025-09-08T06:10:17,787 creating /tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info 2025-09-08T06:10:17,788 writing /tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info/PKG-INFO 2025-09-08T06:10:17,789 writing dependency_links to /tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info/dependency_links.txt 2025-09-08T06:10:17,790 writing entry points to /tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info/entry_points.txt 2025-09-08T06:10:17,790 writing requirements to /tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info/requires.txt 2025-09-08T06:10:17,790 writing top-level names to /tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info/top_level.txt 2025-09-08T06:10:17,791 writing manifest file '/tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info/SOURCES.txt' 2025-09-08T06:10:18,085 reading manifest file '/tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info/SOURCES.txt' 2025-09-08T06:10:18,086 reading manifest template 'MANIFEST.in' 2025-09-08T06:10:18,087 warning: no files found matching 'prob2020/console/frameshift_lrt.R' 2025-09-08T06:10:18,090 writing manifest file '/tmp/pip-pip-egg-info-b8me9zqy/probabilistic2020.egg-info/SOURCES.txt' 2025-09-08T06:10:18,225 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T06:10:18,230 Source in /tmp/pip-wheel-av3of_hs/probabilistic2020_7d4ad61776b245fcab264fc5aaf0731e has version 1.0.6, which satisfies requirement probabilistic2020==1.0.6 from https://files.pythonhosted.org/packages/42/3c/41a788891b605cbace92168f2e2048cc30f89e9ae74c8fb79eb58227987a/probabilistic2020-1.0.6.tar.gz 2025-09-08T06:10:18,230 Removed probabilistic2020==1.0.6 from https://files.pythonhosted.org/packages/42/3c/41a788891b605cbace92168f2e2048cc30f89e9ae74c8fb79eb58227987a/probabilistic2020-1.0.6.tar.gz from build tracker '/tmp/pip-build-tracker-dt90u8x9' 2025-09-08T06:10:18,234 Created temporary directory: /tmp/pip-unpack-ahrwnz6l 2025-09-08T06:10:18,235 Created temporary directory: /tmp/pip-unpack-p07n5m2m 2025-09-08T06:10:18,235 Building wheels for collected packages: probabilistic2020 2025-09-08T06:10:18,236 Created temporary directory: /tmp/pip-wheel-ztdx0p1n 2025-09-08T06:10:18,237 DEPRECATION: Building 'probabilistic2020' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'probabilistic2020'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T06:10:18,238 Building wheel for probabilistic2020 (setup.py): started 2025-09-08T06:10:18,239 Destination directory: /tmp/pip-wheel-ztdx0p1n 2025-09-08T06:10:18,239 Running command python setup.py bdist_wheel 2025-09-08T06:10:19,494 running bdist_wheel 2025-09-08T06:10:19,855 running build 2025-09-08T06:10:19,855 running build_py 2025-09-08T06:10:19,931 creating build/lib.linux-armv7l-cpython-313/prob2020 2025-09-08T06:10:19,931 copying prob2020/__init__.py -> build/lib.linux-armv7l-cpython-313/prob2020 2025-09-08T06:10:19,932 creating build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,932 copying prob2020/python/utils.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,933 copying prob2020/python/sequence_context.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,934 copying prob2020/python/scores.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,934 copying prob2020/python/process_result.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,935 copying prob2020/python/permutation.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,935 copying prob2020/python/p_value.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,936 copying prob2020/python/mymath.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,936 copying prob2020/python/mutation_context.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,937 copying prob2020/python/indel.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,937 copying prob2020/python/gene_sequence.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,938 copying prob2020/python/count_frameshifts.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,939 copying prob2020/python/bed_line.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,939 copying prob2020/python/annotate.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,940 copying prob2020/python/amino_acid.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,940 copying prob2020/python/__init__.py -> build/lib.linux-armv7l-cpython-313/prob2020/python 2025-09-08T06:10:19,941 creating build/lib.linux-armv7l-cpython-313/prob2020/cython 2025-09-08T06:10:19,941 copying prob2020/cython/__init__.py -> build/lib.linux-armv7l-cpython-313/prob2020/cython 2025-09-08T06:10:19,942 creating build/lib.linux-armv7l-cpython-313/prob2020/cpp 2025-09-08T06:10:19,942 copying prob2020/cpp/__init__.py -> build/lib.linux-armv7l-cpython-313/prob2020/cpp 2025-09-08T06:10:19,943 creating build/lib.linux-armv7l-cpython-313/prob2020/console 2025-09-08T06:10:19,943 copying prob2020/console/simulate_non_silent_ratio.py -> build/lib.linux-armv7l-cpython-313/prob2020/console 2025-09-08T06:10:19,944 copying prob2020/console/randomization_test.py -> build/lib.linux-armv7l-cpython-313/prob2020/console 2025-09-08T06:10:19,944 copying prob2020/console/probabilistic2020.py -> build/lib.linux-armv7l-cpython-313/prob2020/console 2025-09-08T06:10:19,945 copying prob2020/console/extract_gene_seq.py -> build/lib.linux-armv7l-cpython-313/prob2020/console 2025-09-08T06:10:19,945 copying prob2020/console/count_frameshifts.py -> build/lib.linux-armv7l-cpython-313/prob2020/console 2025-09-08T06:10:19,946 copying prob2020/console/annotate.py -> build/lib.linux-armv7l-cpython-313/prob2020/console 2025-09-08T06:10:19,946 copying prob2020/console/__init__.py -> build/lib.linux-armv7l-cpython-313/prob2020/console 2025-09-08T06:10:19,950 running build_ext 2025-09-08T06:10:20,279 building 'prob2020.cython.uniform_kde' extension 2025-09-08T06:10:20,280 creating build/temp.linux-armv7l-cpython-313/prob2020/cython 2025-09-08T06:10:20,281 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Iprob2020/cython/ -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c prob2020/cython/uniform_kde.cpp -o build/temp.linux-armv7l-cpython-313/prob2020/cython/uniform_kde.o 2025-09-08T06:10:20,630 prob2020/cython/uniform_kde.cpp:168:12: fatal error: longintrepr.h: No such file or directory 2025-09-08T06:10:20,630 168 | #include "longintrepr.h" 2025-09-08T06:10:20,630 | ^~~~~~~~~~~~~~~ 2025-09-08T06:10:20,630 compilation terminated. 2025-09-08T06:10:20,634 error: command '/usr/bin/arm-linux-gnueabihf-g++' failed with exit code 1 2025-09-08T06:10:20,805 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T06:10:20,817 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T06:10:20,817 exec(compile('"'"''"'"''"'"' 2025-09-08T06:10:20,817 # This is -- a caller that pip uses to run setup.py 2025-09-08T06:10:20,817 # 2025-09-08T06:10:20,817 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T06:10:20,817 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T06:10:20,817 # - It provides a clear error message when setuptools is not installed. 2025-09-08T06:10:20,817 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T06:10:20,817 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T06:10:20,817 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T06:10:20,817 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T06:10:20,817 import os, sys, tokenize, traceback 2025-09-08T06:10:20,817 2025-09-08T06:10:20,817 try: 2025-09-08T06:10:20,817 import setuptools 2025-09-08T06:10:20,817 except ImportError: 2025-09-08T06:10:20,817 print( 2025-09-08T06:10:20,817 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T06:10:20,817 "the build environment with exception:", 2025-09-08T06:10:20,817 file=sys.stderr, 2025-09-08T06:10:20,817 ) 2025-09-08T06:10:20,817 traceback.print_exc() 2025-09-08T06:10:20,817 sys.exit(1) 2025-09-08T06:10:20,817 2025-09-08T06:10:20,817 __file__ = %r 2025-09-08T06:10:20,817 sys.argv[0] = __file__ 2025-09-08T06:10:20,817 2025-09-08T06:10:20,817 if os.path.exists(__file__): 2025-09-08T06:10:20,817 filename = __file__ 2025-09-08T06:10:20,817 with tokenize.open(__file__) as f: 2025-09-08T06:10:20,817 setup_py_code = f.read() 2025-09-08T06:10:20,817 else: 2025-09-08T06:10:20,817 filename = "" 2025-09-08T06:10:20,817 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T06:10:20,817 2025-09-08T06:10:20,817 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T06:10:20,817 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-av3of_hs/probabilistic2020_7d4ad61776b245fcab264fc5aaf0731e/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-ztdx0p1n[/] 2025-09-08T06:10:20,817 [bold magenta]cwd[/]: /tmp/pip-wheel-av3of_hs/probabilistic2020_7d4ad61776b245fcab264fc5aaf0731e/ 2025-09-08T06:10:20,817 Building wheel for probabilistic2020 (setup.py): finished with status 'error' 2025-09-08T06:10:20,818 ERROR: Failed building wheel for probabilistic2020 2025-09-08T06:10:20,819 Running setup.py clean for probabilistic2020 2025-09-08T06:10:20,819 Running command python setup.py clean 2025-09-08T06:10:22,163 running clean 2025-09-08T06:10:22,310 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T06:10:22,311 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T06:10:22,312 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T06:10:22,312 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T06:10:22,312 removing 'build' 2025-09-08T06:10:22,446 Failed to build probabilistic2020 2025-09-08T06:10:22,447 ERROR: Failed to build one or more wheels 2025-09-08T06:10:22,448 Exception information: 2025-09-08T06:10:22,448 Traceback (most recent call last): 2025-09-08T06:10:22,448 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T06:10:22,448 status = _inner_run() 2025-09-08T06:10:22,448 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T06:10:22,448 return self.run(options, args) 2025-09-08T06:10:22,448 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T06:10:22,448 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T06:10:22,448 return func(self, options, args) 2025-09-08T06:10:22,448 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T06:10:22,448 raise CommandError("Failed to build one or more wheels") 2025-09-08T06:10:22,448 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T06:10:22,452 Removed build tracker: '/tmp/pip-build-tracker-dt90u8x9'