2025-09-08T06:54:22,962 Created temporary directory: /tmp/pip-build-tracker-hzqsjped 2025-09-08T06:54:22,963 Initialized build tracking at /tmp/pip-build-tracker-hzqsjped 2025-09-08T06:54:22,963 Created build tracker: /tmp/pip-build-tracker-hzqsjped 2025-09-08T06:54:22,963 Entered build tracker: /tmp/pip-build-tracker-hzqsjped 2025-09-08T06:54:22,963 Created temporary directory: /tmp/pip-wheel-ef4hs1zk 2025-09-08T06:54:22,967 Created temporary directory: /tmp/pip-ephem-wheel-cache-4hn36p73 2025-09-08T06:54:23,022 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T06:54:23,025 2 location(s) to search for versions of pyemd: 2025-09-08T06:54:23,025 * https://pypi.org/simple/pyemd/ 2025-09-08T06:54:23,025 * https://www.piwheels.org/simple/pyemd/ 2025-09-08T06:54:23,025 Fetching project page and analyzing links: https://pypi.org/simple/pyemd/ 2025-09-08T06:54:23,025 Getting page https://pypi.org/simple/pyemd/ 2025-09-08T06:54:23,026 Found index url 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Skipping link: No binaries permitted for pyemd: https://files.pythonhosted.org/packages/fd/26/e8ad349c8dad38d672c99ddbc047c536d264363c7bd289381496dc101da7/pyemd-1.0.0-cp311-cp311-musllinux_1_1_i686.whl (from https://pypi.org/simple/pyemd/) (requires-python:>=3.7) 2025-09-08T06:54:23,205 Skipping link: No binaries permitted for pyemd: https://files.pythonhosted.org/packages/86/b7/bf7875f3fb30ce9dc5119967a7cf3a1e233e4f2b99ebbbd758be479b325d/pyemd-1.0.0-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/pyemd/) (requires-python:>=3.7) 2025-09-08T06:54:23,205 Skipping link: No binaries permitted for pyemd: https://files.pythonhosted.org/packages/20/2b/ec3ae2e2123927b5a1fd761ccb542006137f62b8ed1ffb448c139d2e31fe/pyemd-1.0.0-cp311-cp311-win32.whl (from https://pypi.org/simple/pyemd/) (requires-python:>=3.7) 2025-09-08T06:54:23,205 Skipping link: No binaries permitted for pyemd: 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binaries permitted for pyemd: https://files.pythonhosted.org/packages/55/94/b0937bd72312d8d7fa73cfeb4668f113f076278946b7d264fe0ec22efeef/pyemd-1.0.0-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/pyemd/) (requires-python:>=3.7) 2025-09-08T06:54:23,207 Skipping link: No binaries permitted for pyemd: https://files.pythonhosted.org/packages/2e/f1/3de2e49065e7f5e76ac8f2bb809fbbea9a6adf49db2b422a3dd5624d89c5/pyemd-1.0.0-cp39-cp39-win32.whl (from https://pypi.org/simple/pyemd/) (requires-python:>=3.7) 2025-09-08T06:54:23,207 Skipping link: No binaries permitted for pyemd: https://files.pythonhosted.org/packages/b7/64/08855a64a1ecda3ec0f8cdbf8600203ffb0685ee819a71d2f2d422bfb821/pyemd-1.0.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/pyemd/) (requires-python:>=3.7) 2025-09-08T06:54:23,208 Found link https://files.pythonhosted.org/packages/1a/d5/91492007e786a7fbcbba8423cd3637ea9311c4844aaf753d8e2ba086e48a/pyemd-1.0.0.tar.gz (from https://pypi.org/simple/pyemd/) 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https://www.piwheels.org/simple/pyemd/) 2025-09-08T06:54:23,339 Skipping link: No binaries permitted for pyemd: https://archive1.piwheels.org/simple/pyemd/pyemd-0.0.8-cp34-cp34m-linux_armv7l.whl#sha256=bceea96b299eeafa493aa7c4fb25ddafa6979e6bce7f47ea79322263ebbd8bea (from https://www.piwheels.org/simple/pyemd/) 2025-09-08T06:54:23,339 Skipping link: No binaries permitted for pyemd: https://archive1.piwheels.org/simple/pyemd/pyemd-0.0.8-cp34-cp34m-linux_armv6l.whl#sha256=bceea96b299eeafa493aa7c4fb25ddafa6979e6bce7f47ea79322263ebbd8bea (from https://www.piwheels.org/simple/pyemd/) 2025-09-08T06:54:23,339 Skipping link: No binaries permitted for pyemd: https://archive1.piwheels.org/simple/pyemd/pyemd-0.0.8-cp39-cp39-linux_armv6l.whl#sha256=40ea38524662618d92c3899da903994e00be782efc154f7df4504817e9831bef (from https://www.piwheels.org/simple/pyemd/) 2025-09-08T06:54:23,339 Skipping link: No binaries permitted for pyemd: 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https://www.piwheels.org/simple/pyemd/) 2025-09-08T06:54:23,340 Skipping link: No binaries permitted for pyemd: https://archive1.piwheels.org/simple/pyemd/pyemd-0.0.7-cp34-cp34m-linux_armv6l.whl#sha256=3a19864dcf0021ab08d935820831e9440208eadd7650b757a781b8eb0a19d97d (from https://www.piwheels.org/simple/pyemd/) 2025-09-08T06:54:23,340 Skipping link: No binaries permitted for pyemd: https://archive1.piwheels.org/simple/pyemd/pyemd-0.0.7-cp39-cp39-linux_armv6l.whl#sha256=801595662e563c4af423029d082746bfbd292f1381fc195bbe562b3ab8ae5ea9 (from https://www.piwheels.org/simple/pyemd/) 2025-09-08T06:54:23,340 Skipping link: No binaries permitted for pyemd: https://archive1.piwheels.org/simple/pyemd/pyemd-0.0.7-cp39-cp39-linux_armv7l.whl#sha256=801595662e563c4af423029d082746bfbd292f1381fc195bbe562b3ab8ae5ea9 (from https://www.piwheels.org/simple/pyemd/) 2025-09-08T06:54:23,340 Skipping link: not a file: https://www.piwheels.org/simple/pyemd/ 2025-09-08T06:54:23,340 Skipping link: not a file: https://pypi.org/simple/pyemd/ 2025-09-08T06:54:23,364 Given no hashes to check 1 links for project 'pyemd': discarding no candidates 2025-09-08T06:54:23,365 Collecting pyemd==0.4.0 2025-09-08T06:54:23,366 Created temporary directory: /tmp/pip-unpack-bk9bs9cj 2025-09-08T06:54:23,501 Downloading pyemd-0.4.0.tar.gz (65 kB) 2025-09-08T06:54:23,549 Added pyemd==0.4.0 from https://files.pythonhosted.org/packages/cc/3e/be1b1bf25eeac70d4100e282e2e72048a8349546d6a7e7f6ba88bebc153b/pyemd-0.4.0.tar.gz to build tracker '/tmp/pip-build-tracker-hzqsjped' 2025-09-08T06:54:23,550 Running setup.py (path:/tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf/setup.py) egg_info for package pyemd 2025-09-08T06:54:23,550 Created temporary directory: /tmp/pip-pip-egg-info-96lm1m8_ 2025-09-08T06:54:23,551 Preparing metadata (setup.py): started 2025-09-08T06:54:23,551 Running command python setup.py egg_info 2025-09-08T06:54:26,563 Compiling pyemd/emd.pyx because it changed. 2025-09-08T06:54:26,563 [1/1] Cythonizing pyemd/emd.pyx 2025-09-08T06:54:26,675 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T06:54:26,675 !! 2025-09-08T06:54:26,675 ******************************************************************************** 2025-09-08T06:54:26,675 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T06:54:26,675 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T06:54:26,675 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T06:54:26,675 or your builds will no longer be supported. 2025-09-08T06:54:26,676 ******************************************************************************** 2025-09-08T06:54:26,676 !! 2025-09-08T06:54:26,676 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T06:54:30,868 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T06:54:30,868 !! 2025-09-08T06:54:30,868 ******************************************************************************** 2025-09-08T06:54:30,868 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T06:54:30,868 License :: OSI Approved :: MIT License 2025-09-08T06:54:30,868 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T06:54:30,869 ******************************************************************************** 2025-09-08T06:54:30,869 !! 2025-09-08T06:54:30,869 self._finalize_license_expression() 2025-09-08T06:54:30,941 running egg_info 2025-09-08T06:54:31,014 creating /tmp/pip-pip-egg-info-96lm1m8_/pyemd.egg-info 2025-09-08T06:54:31,014 writing /tmp/pip-pip-egg-info-96lm1m8_/pyemd.egg-info/PKG-INFO 2025-09-08T06:54:31,016 writing dependency_links to /tmp/pip-pip-egg-info-96lm1m8_/pyemd.egg-info/dependency_links.txt 2025-09-08T06:54:31,016 writing requirements to /tmp/pip-pip-egg-info-96lm1m8_/pyemd.egg-info/requires.txt 2025-09-08T06:54:31,016 writing top-level names to /tmp/pip-pip-egg-info-96lm1m8_/pyemd.egg-info/top_level.txt 2025-09-08T06:54:31,017 writing manifest file '/tmp/pip-pip-egg-info-96lm1m8_/pyemd.egg-info/SOURCES.txt' 2025-09-08T06:54:32,313 reading manifest file '/tmp/pip-pip-egg-info-96lm1m8_/pyemd.egg-info/SOURCES.txt' 2025-09-08T06:54:32,316 writing manifest file '/tmp/pip-pip-egg-info-96lm1m8_/pyemd.egg-info/SOURCES.txt' 2025-09-08T06:54:32,709 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T06:54:32,714 Source in /tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf has version 0.4.0, which satisfies requirement pyemd==0.4.0 from https://files.pythonhosted.org/packages/cc/3e/be1b1bf25eeac70d4100e282e2e72048a8349546d6a7e7f6ba88bebc153b/pyemd-0.4.0.tar.gz 2025-09-08T06:54:32,714 Removed pyemd==0.4.0 from https://files.pythonhosted.org/packages/cc/3e/be1b1bf25eeac70d4100e282e2e72048a8349546d6a7e7f6ba88bebc153b/pyemd-0.4.0.tar.gz from build tracker '/tmp/pip-build-tracker-hzqsjped' 2025-09-08T06:54:32,718 Created temporary directory: /tmp/pip-unpack-m0m5r3oe 2025-09-08T06:54:32,718 Created temporary directory: /tmp/pip-unpack-3vzyle2a 2025-09-08T06:54:32,719 Building wheels for collected packages: pyemd 2025-09-08T06:54:32,720 Created temporary directory: /tmp/pip-wheel-u6wo5nmp 2025-09-08T06:54:32,721 DEPRECATION: Building 'pyemd' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'pyemd'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T06:54:32,722 Building wheel for pyemd (setup.py): started 2025-09-08T06:54:32,723 Destination directory: /tmp/pip-wheel-u6wo5nmp 2025-09-08T06:54:32,723 Running command python setup.py bdist_wheel 2025-09-08T06:54:33,986 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T06:54:33,986 !! 2025-09-08T06:54:33,987 ******************************************************************************** 2025-09-08T06:54:33,987 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T06:54:33,987 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T06:54:33,987 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T06:54:33,987 or your builds will no longer be supported. 2025-09-08T06:54:33,987 ******************************************************************************** 2025-09-08T06:54:33,987 !! 2025-09-08T06:54:33,987 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T06:54:34,652 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T06:54:34,652 !! 2025-09-08T06:54:34,652 ******************************************************************************** 2025-09-08T06:54:34,652 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T06:54:34,653 License :: OSI Approved :: MIT License 2025-09-08T06:54:34,653 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T06:54:34,653 ******************************************************************************** 2025-09-08T06:54:34,653 !! 2025-09-08T06:54:34,653 self._finalize_license_expression() 2025-09-08T06:54:34,653 running bdist_wheel 2025-09-08T06:54:34,951 running build 2025-09-08T06:54:34,951 running build_py 2025-09-08T06:54:35,027 creating build/lib.linux-armv7l-cpython-313/pyemd 2025-09-08T06:54:35,028 copying pyemd/__init__.py -> build/lib.linux-armv7l-cpython-313/pyemd 2025-09-08T06:54:35,029 copying pyemd/__about__.py -> build/lib.linux-armv7l-cpython-313/pyemd 2025-09-08T06:54:35,031 copying pyemd/emd.pyx -> build/lib.linux-armv7l-cpython-313/pyemd 2025-09-08T06:54:35,031 creating build/lib.linux-armv7l-cpython-313/pyemd/lib 2025-09-08T06:54:35,031 copying pyemd/lib/min_cost_flow.hpp -> build/lib.linux-armv7l-cpython-313/pyemd/lib 2025-09-08T06:54:35,032 copying pyemd/lib/flow_utils.hpp -> build/lib.linux-armv7l-cpython-313/pyemd/lib 2025-09-08T06:54:35,033 copying pyemd/lib/emd_hat_signatures_interface.hpp -> build/lib.linux-armv7l-cpython-313/pyemd/lib 2025-09-08T06:54:35,033 copying pyemd/lib/emd_hat_impl.hpp -> build/lib.linux-armv7l-cpython-313/pyemd/lib 2025-09-08T06:54:35,034 copying pyemd/lib/emd_hat.hpp -> build/lib.linux-armv7l-cpython-313/pyemd/lib 2025-09-08T06:54:35,034 copying pyemd/lib/EMD_DEFS.hpp -> build/lib.linux-armv7l-cpython-313/pyemd/lib 2025-09-08T06:54:35,035 copying pyemd/../README.rst -> build/lib.linux-armv7l-cpython-313/pyemd/.. 2025-09-08T06:54:35,036 running build_ext 2025-09-08T06:54:35,259 building 'pyemd.emd' extension 2025-09-08T06:54:35,259 creating build/temp.linux-armv7l-cpython-313/pyemd 2025-09-08T06:54:35,260 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Ipyemd -I/usr/include/python3.13 -I/tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf/.eggs/numpy-1.26.4-py3.13-linux-armv7l.egg/numpy/core/include -c pyemd/emd.cpp -o build/temp.linux-armv7l-cpython-313/pyemd/emd.o 2025-09-08T06:54:35,756 In file included from /tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf/.eggs/numpy-1.26.4-py3.13-linux-armv7l.egg/numpy/core/include/numpy/ndarraytypes.h:1929, 2025-09-08T06:54:35,756 from /tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf/.eggs/numpy-1.26.4-py3.13-linux-armv7l.egg/numpy/core/include/numpy/ndarrayobject.h:12, 2025-09-08T06:54:35,756 from /tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf/.eggs/numpy-1.26.4-py3.13-linux-armv7l.egg/numpy/core/include/numpy/arrayobject.h:5, 2025-09-08T06:54:35,757 from pyemd/emd.cpp:1175: 2025-09-08T06:54:35,757 /tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf/.eggs/numpy-1.26.4-py3.13-linux-armv7l.egg/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2025-09-08T06:54:35,757 17 | #warning "Using deprecated NumPy API, disable it with " \ 2025-09-08T06:54:35,757 | ^~~~~~~ 2025-09-08T06:54:37,816 pyemd/emd.cpp: In function ‘npy_intp __pyx_f_5numpy_5dtype_8itemsize_itemsize(PyArray_Descr*)’: 2025-09-08T06:54:37,816 pyemd/emd.cpp:3867:13: error: ‘PyDataType_ELSIZE’ was not declared in this scope; did you mean ‘PyDataType_ISUNSIZED’? 2025-09-08T06:54:37,816 3867 | __pyx_r = PyDataType_ELSIZE(__pyx_v_self); 2025-09-08T06:54:37,816 | ^~~~~~~~~~~~~~~~~ 2025-09-08T06:54:37,817 | PyDataType_ISUNSIZED 2025-09-08T06:54:37,852 pyemd/emd.cpp: In function ‘npy_intp __pyx_f_5numpy_5dtype_9alignment_alignment(PyArray_Descr*)’: 2025-09-08T06:54:37,852 pyemd/emd.cpp:3901:13: error: ‘PyDataType_ALIGNMENT’ was not declared in this scope; did you mean ‘PyDataType_ISSIGNED’? 2025-09-08T06:54:37,852 3901 | __pyx_r = PyDataType_ALIGNMENT(__pyx_v_self); 2025-09-08T06:54:37,852 | ^~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:37,853 | PyDataType_ISSIGNED 2025-09-08T06:54:37,882 pyemd/emd.cpp: In function ‘PyObject* __pyx_f_5numpy_5dtype_6fields_fields(PyArray_Descr*)’: 2025-09-08T06:54:37,882 pyemd/emd.cpp:3939:15: error: ‘PyDataType_FIELDS’ was not declared in this scope; did you mean ‘PyDataType_HASFIELDS’? 2025-09-08T06:54:37,883 3939 | __pyx_t_1 = PyDataType_FIELDS(__pyx_v_self); 2025-09-08T06:54:37,883 | ^~~~~~~~~~~~~~~~~ 2025-09-08T06:54:37,883 | PyDataType_HASFIELDS 2025-09-08T06:54:37,914 pyemd/emd.cpp: In function ‘PyObject* __pyx_f_5numpy_5dtype_5names_names(PyArray_Descr*)’: 2025-09-08T06:54:37,914 pyemd/emd.cpp:3981:15: error: ‘PyDataType_NAMES’ was not declared in this scope; did you mean ‘PyDataType_ISNUMBER’? 2025-09-08T06:54:37,914 3981 | __pyx_t_1 = PyDataType_NAMES(__pyx_v_self); 2025-09-08T06:54:37,915 | ^~~~~~~~~~~~~~~~ 2025-09-08T06:54:37,915 | PyDataType_ISNUMBER 2025-09-08T06:54:37,949 pyemd/emd.cpp: In function ‘PyArray_ArrayDescr* __pyx_f_5numpy_5dtype_8subarray_subarray(PyArray_Descr*)’: 2025-09-08T06:54:37,950 pyemd/emd.cpp:4019:13: error: ‘PyDataType_SUBARRAY’ was not declared in this scope; did you mean ‘PyDataType_HASSUBARRAY’? 2025-09-08T06:54:37,950 4019 | __pyx_r = PyDataType_SUBARRAY(__pyx_v_self); 2025-09-08T06:54:37,950 | ^~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:37,950 | PyDataType_HASSUBARRAY 2025-09-08T06:54:37,980 pyemd/emd.cpp: In function ‘npy_uint64 __pyx_f_5numpy_5dtype_5flags_flags(PyArray_Descr*)’: 2025-09-08T06:54:37,980 pyemd/emd.cpp:4053:13: error: ‘PyDataType_FLAGS’ was not declared in this scope; did you mean ‘PyDataType_FLAGCHK’? 2025-09-08T06:54:37,980 4053 | __pyx_r = PyDataType_FLAGS(__pyx_v_self); 2025-09-08T06:54:37,980 | ^~~~~~~~~~~~~~~~ 2025-09-08T06:54:37,981 | PyDataType_FLAGCHK 2025-09-08T06:54:38,015 pyemd/emd.cpp: In function ‘int __pyx_f_5numpy_9broadcast_7numiter_numiter(PyArrayMultiIterObject*)’: 2025-09-08T06:54:38,016 pyemd/emd.cpp:4087:13: error: ‘PyArray_MultiIter_NUMITER’ was not declared in this scope; did you mean ‘PyArray_MultiIter_NEXTi’? 2025-09-08T06:54:38,016 4087 | __pyx_r = PyArray_MultiIter_NUMITER(__pyx_v_self); 2025-09-08T06:54:38,016 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,016 | PyArray_MultiIter_NEXTi 2025-09-08T06:54:38,048 pyemd/emd.cpp: In function ‘npy_intp __pyx_f_5numpy_9broadcast_4size_size(PyArrayMultiIterObject*)’: 2025-09-08T06:54:38,048 pyemd/emd.cpp:4121:13: error: ‘PyArray_MultiIter_SIZE’ was not declared in this scope; did you mean ‘PyArray_MultiIter_RESET’? 2025-09-08T06:54:38,049 4121 | __pyx_r = PyArray_MultiIter_SIZE(__pyx_v_self); 2025-09-08T06:54:38,049 | ^~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,049 | PyArray_MultiIter_RESET 2025-09-08T06:54:38,082 pyemd/emd.cpp: In function ‘npy_intp __pyx_f_5numpy_9broadcast_5index_index(PyArrayMultiIterObject*)’: 2025-09-08T06:54:38,082 pyemd/emd.cpp:4155:13: error: ‘PyArray_MultiIter_INDEX’ was not declared in this scope; did you mean ‘PyArray_MultiIter_NEXT’? 2025-09-08T06:54:38,082 4155 | __pyx_r = PyArray_MultiIter_INDEX(__pyx_v_self); 2025-09-08T06:54:38,082 | ^~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,083 | PyArray_MultiIter_NEXT 2025-09-08T06:54:38,115 pyemd/emd.cpp: In function ‘int __pyx_f_5numpy_9broadcast_2nd_nd(PyArrayMultiIterObject*)’: 2025-09-08T06:54:38,115 pyemd/emd.cpp:4189:13: error: ‘PyArray_MultiIter_NDIM’ was not declared in this scope; did you mean ‘PyArray_MultiIter_NEXT’? 2025-09-08T06:54:38,116 4189 | __pyx_r = PyArray_MultiIter_NDIM(__pyx_v_self); 2025-09-08T06:54:38,116 | ^~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,116 | PyArray_MultiIter_NEXT 2025-09-08T06:54:38,149 pyemd/emd.cpp: In function ‘npy_intp* __pyx_f_5numpy_9broadcast_10dimensions_dimensions(PyArrayMultiIterObject*)’: 2025-09-08T06:54:38,149 pyemd/emd.cpp:4223:13: error: ‘PyArray_MultiIter_DIMS’ was not declared in this scope; did you mean ‘PyArray_MultiIter_DATA’? 2025-09-08T06:54:38,149 4223 | __pyx_r = PyArray_MultiIter_DIMS(__pyx_v_self); 2025-09-08T06:54:38,149 | ^~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,150 | PyArray_MultiIter_DATA 2025-09-08T06:54:38,183 pyemd/emd.cpp: In function ‘void** __pyx_f_5numpy_9broadcast_5iters_iters(PyArrayMultiIterObject*)’: 2025-09-08T06:54:38,184 pyemd/emd.cpp:4257:13: error: ‘PyArray_MultiIter_ITERS’ was not declared in this scope; did you mean ‘PyArray_MultiIter_NEXT’? 2025-09-08T06:54:38,184 4257 | __pyx_r = PyArray_MultiIter_ITERS(__pyx_v_self); 2025-09-08T06:54:38,184 | ^~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,184 | PyArray_MultiIter_NEXT 2025-09-08T06:54:38,600 In file included from pyemd/lib/emd_hat.hpp:95, 2025-09-08T06:54:38,600 from pyemd/emd.cpp:1180: 2025-09-08T06:54:38,600 pyemd/lib/emd_hat_impl.hpp: In instantiation of ‘NUM_T emd_hat_gd_metric::operator()(const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = double; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’: 2025-09-08T06:54:38,601 pyemd/lib/emd_hat.hpp:87:52: required from here 2025-09-08T06:54:38,601 87 | double emd = emd_hat_gd_metric_double_with_flow(P, Q, C, extra_mass_penalty, &flow); 2025-09-08T06:54:38,601 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,601 pyemd/lib/emd_hat_impl.hpp:41:24: warning: comparison of integer expressions of different signedness: ‘NODE_T’ {aka ‘int’} and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,601 41 | {for (NODE_T i=0; i::operator()(const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = double; FLOW_TYPE_T FLOW_TYPE = NO_FLOW]’: 2025-09-08T06:54:38,635 pyemd/emd.cpp:6185:41: required from here 2025-09-08T06:54:38,635 6185 | __pyx_t_9 = emd_hat_gd_metric_double(__PYX_STD_MOVE_IF_SUPPORTED(__pyx_t_5), __PYX_STD_MOVE_IF_SUPPORTED(__pyx_t_6), __PYX_STD_MOVE_IF_SUPPORTED(__pyx_t_7), __pyx_t_8); 2025-09-08T06:54:38,635 | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,635 pyemd/lib/emd_hat_impl.hpp:41:24: warning: comparison of integer expressions of different signedness: ‘NODE_T’ {aka ‘int’} and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,636 41 | {for (NODE_T i=0; i >&) [with NUM_T = double]’: 2025-09-08T06:54:38,731 pyemd/lib/emd_hat_impl.hpp:33:43: required from ‘NUM_T emd_hat_gd_metric::operator()(const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = double; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’ 2025-09-08T06:54:38,731 33 | if (FLOW_TYPE!=NO_FLOW) fillFWithZeros(*F); 2025-09-08T06:54:38,731 | ~~~~~~~~~~~~~~^~~~ 2025-09-08T06:54:38,732 pyemd/lib/emd_hat.hpp:87:52: required from here 2025-09-08T06:54:38,732 87 | double emd = emd_hat_gd_metric_double_with_flow(P, Q, C, extra_mass_penalty, &flow); 2025-09-08T06:54:38,732 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,732 pyemd/lib/emd_hat_impl.hpp:17:24: warning: comparison of integer expressions of different signedness: ‘NODE_T’ {aka ‘int’} and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,732 17 | for (NODE_T i= 0; i >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,732 18 | for (NODE_T j= 0; j::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = long long int; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’: 2025-09-08T06:54:38,854 pyemd/lib/emd_hat_impl.hpp:385:62: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW; NUM_T = long long int]’ 2025-09-08T06:54:38,855 385 | return emd_hat_impl_integral_types()(POrig,QOrig,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:38,855 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,855 pyemd/lib/emd_hat_impl.hpp:456:56: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >, std::allocator > > >&, NUM_T, std::vector >, std::allocator > > >*) [with FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW; NUM_T = double]’ 2025-09-08T06:54:38,855 456 | double dist= emd_hat_impl()(iPOrig,iQOrig,iP,iQ,iC,0,&iF); 2025-09-08T06:54:38,855 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,855 pyemd/lib/emd_hat_impl.hpp:57:43: required from ‘NUM_T emd_hat_gd_metric::operator()(const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = double; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’ 2025-09-08T06:54:38,855 57 | return emd_hat_impl()(Pc,Qc,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:38,855 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,855 pyemd/lib/emd_hat.hpp:87:52: required from here 2025-09-08T06:54:38,856 87 | double emd = emd_hat_gd_metric_double_with_flow(P, Q, C, extra_mass_penalty, &flow); 2025-09-08T06:54:38,856 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,856 pyemd/lib/emd_hat_impl.hpp:255:24: warning: comparison of integer expressions of different signedness: ‘NODE_T’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,856 255 | {for (NODE_T i=0; i, std::allocator > >, std::allocator, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,856 263 | {for (NODE_T i=0; i, std::allocator > >, std::allocator, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,866 296 | for (NODE_T new_name_from=0; new_name_from::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = long long int; FLOW_TYPE_T FLOW_TYPE = NO_FLOW]’: 2025-09-08T06:54:38,893 pyemd/lib/emd_hat_impl.hpp:385:62: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with FLOW_TYPE_T FLOW_TYPE = NO_FLOW; NUM_T = long long int]’ 2025-09-08T06:54:38,894 385 | return emd_hat_impl_integral_types()(POrig,QOrig,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:38,894 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,894 pyemd/lib/emd_hat_impl.hpp:456:56: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >, std::allocator > > >&, NUM_T, std::vector >, std::allocator > > >*) [with FLOW_TYPE_T FLOW_TYPE = NO_FLOW; NUM_T = double]’ 2025-09-08T06:54:38,894 456 | double dist= emd_hat_impl()(iPOrig,iQOrig,iP,iQ,iC,0,&iF); 2025-09-08T06:54:38,894 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,894 pyemd/lib/emd_hat_impl.hpp:57:43: required from ‘NUM_T emd_hat_gd_metric::operator()(const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = double; FLOW_TYPE_T FLOW_TYPE = NO_FLOW]’ 2025-09-08T06:54:38,894 57 | return emd_hat_impl()(Pc,Qc,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:38,894 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,894 pyemd/emd.cpp:6185:41: required from here 2025-09-08T06:54:38,895 6185 | __pyx_t_9 = emd_hat_gd_metric_double(__PYX_STD_MOVE_IF_SUPPORTED(__pyx_t_5), __PYX_STD_MOVE_IF_SUPPORTED(__pyx_t_6), __PYX_STD_MOVE_IF_SUPPORTED(__pyx_t_7), __pyx_t_8); 2025-09-08T06:54:38,895 | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:38,895 pyemd/lib/emd_hat_impl.hpp:255:24: warning: comparison of integer expressions of different signedness: ‘NODE_T’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,895 255 | {for (NODE_T i=0; i, std::allocator > >, std::allocator, std::allocator > > > >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:38,895 263 | {for (NODE_T i=0; i::compute_shortest_path(std::vector&, std::vector&, NODE_T, std::vector > >&, std::vector > >&, const std::vector&, NODE_T&) [with NUM_T = long long int; NODE_T = int]’: 2025-09-08T06:54:39,032 pyemd/lib/min_cost_flow.hpp:155:17: required from ‘NUM_T min_cost_flow::operator()(std::vector&, const std::vector > >&, std::vector > >&) [with NUM_T = long long int]’ 2025-09-08T06:54:39,032 155 | compute_shortest_path(d,prev, k,r_cost_forward,r_cost_cap_backward , e,l); 2025-09-08T06:54:39,032 | ^~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,032 pyemd/lib/emd_hat_impl.hpp:291:24: required from ‘NUM_T emd_hat_impl_integral_types::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = long long int; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’ 2025-09-08T06:54:39,032 291 | NUM_T mcf_dist= mcf(bb,cc,flows); 2025-09-08T06:54:39,032 | ~~~^~~~~~~~~~~~~ 2025-09-08T06:54:39,032 pyemd/lib/emd_hat_impl.hpp:385:62: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW; NUM_T = long long int]’ 2025-09-08T06:54:39,032 385 | return emd_hat_impl_integral_types()(POrig,QOrig,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:39,032 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,033 pyemd/lib/emd_hat_impl.hpp:456:56: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >, std::allocator > > >&, NUM_T, std::vector >, std::allocator > > >*) [with FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW; NUM_T = double]’ 2025-09-08T06:54:39,033 456 | double dist= emd_hat_impl()(iPOrig,iQOrig,iP,iQ,iC,0,&iF); 2025-09-08T06:54:39,033 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,033 pyemd/lib/emd_hat_impl.hpp:57:43: required from ‘NUM_T emd_hat_gd_metric::operator()(const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = double; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’ 2025-09-08T06:54:39,033 57 | return emd_hat_impl()(Pc,Qc,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:39,033 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,033 pyemd/lib/emd_hat.hpp:87:52: required from here 2025-09-08T06:54:39,033 87 | double emd = emd_hat_gd_metric_double_with_flow(P, Q, C, extra_mass_penalty, &flow); 2025-09-08T06:54:39,033 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,033 pyemd/lib/min_cost_flow.hpp:321:37: warning: comparison of integer expressions of different signedness: ‘__gnu_cxx::__alloc_traits, int>::value_type’ {aka ‘int’} and ‘std::vector, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:39,034 321 | if ( (_nodes_to_Q[v], int>::value_type’ {aka ‘int’} and ‘std::vector, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:39,034 332 | if ( (_nodes_to_Q[v] >&, const std::vector&, const std::vector&, std::vector&, std::vector&) [with NUM_T = long long int]’: 2025-09-08T06:54:39,040 pyemd/lib/flow_utils.hpp:46:44: required from ‘void transform_flow_to_regular(std::vector >&, const std::vector&, const std::vector&) [with NUM_T = long long int]’ 2025-09-08T06:54:39,040 46 | return_flow_from_to_transhipment_vertex(F,P,Q, 2025-09-08T06:54:39,040 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ 2025-09-08T06:54:39,040 47 | flow_from_P_to_transhipment, 2025-09-08T06:54:39,040 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,040 48 | flow_from_transhipment_to_Q); 2025-09-08T06:54:39,041 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,041 pyemd/lib/emd_hat_impl.hpp:322:70: required from ‘NUM_T emd_hat_impl_integral_types::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = long long int; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’ 2025-09-08T06:54:39,041 322 | if (FLOW_TYPE==WITHOUT_EXTRA_MASS_FLOW) transform_flow_to_regular(*F,POrig,QOrig); 2025-09-08T06:54:39,041 | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,041 pyemd/lib/emd_hat_impl.hpp:385:62: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW; NUM_T = long long int]’ 2025-09-08T06:54:39,041 385 | return emd_hat_impl_integral_types()(POrig,QOrig,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:39,041 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,041 pyemd/lib/emd_hat_impl.hpp:456:56: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >, std::allocator > > >&, NUM_T, std::vector >, std::allocator > > >*) [with FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW; NUM_T = double]’ 2025-09-08T06:54:39,041 456 | double dist= emd_hat_impl()(iPOrig,iQOrig,iP,iQ,iC,0,&iF); 2025-09-08T06:54:39,042 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,042 pyemd/lib/emd_hat_impl.hpp:57:43: required from ‘NUM_T emd_hat_gd_metric::operator()(const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = double; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’ 2025-09-08T06:54:39,042 57 | return emd_hat_impl()(Pc,Qc,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:39,042 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,042 pyemd/lib/emd_hat.hpp:87:52: required from here 2025-09-08T06:54:39,042 87 | double emd = emd_hat_gd_metric_double_with_flow(P, Q, C, extra_mass_penalty, &flow); 2025-09-08T06:54:39,042 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,042 pyemd/lib/flow_utils.hpp:25:24: warning: comparison of integer expressions of different signedness: ‘NODE_T’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:39,042 25 | for (NODE_T i= 0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:39,043 26 | for (NODE_T j= 0; j::heapify(std::vector >&, std::vector&, NODE_T) [with NUM_T = long long int; NODE_T = int]’: 2025-09-08T06:54:39,142 pyemd/lib/min_cost_flow.hpp:392:9: required from ‘void min_cost_flow::heap_remove_first(std::vector >&, std::vector&) [with NUM_T = long long int]’ 2025-09-08T06:54:39,142 392 | heapify(Q,nodes_to_Q , 0); 2025-09-08T06:54:39,142 | ^~~~~~~ 2025-09-08T06:54:39,142 pyemd/lib/min_cost_flow.hpp:313:13: required from ‘void min_cost_flow::compute_shortest_path(std::vector&, std::vector&, NODE_T, std::vector > >&, std::vector > >&, const std::vector&, NODE_T&) [with NUM_T = long long int; NODE_T = int]’ 2025-09-08T06:54:39,142 313 | heap_remove_first(Q, _nodes_to_Q); 2025-09-08T06:54:39,142 | ^~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,142 pyemd/lib/min_cost_flow.hpp:155:17: required from ‘NUM_T min_cost_flow::operator()(std::vector&, const std::vector > >&, std::vector > >&) [with NUM_T = long long int]’ 2025-09-08T06:54:39,142 155 | compute_shortest_path(d,prev, k,r_cost_forward,r_cost_cap_backward , e,l); 2025-09-08T06:54:39,143 | ^~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,143 pyemd/lib/emd_hat_impl.hpp:291:24: required from ‘NUM_T emd_hat_impl_integral_types::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = long long int; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’ 2025-09-08T06:54:39,143 291 | NUM_T mcf_dist= mcf(bb,cc,flows); 2025-09-08T06:54:39,143 | ~~~^~~~~~~~~~~~~ 2025-09-08T06:54:39,143 pyemd/lib/emd_hat_impl.hpp:385:62: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector&, const std::vector&, const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW; NUM_T = long long int]’ 2025-09-08T06:54:39,143 385 | return emd_hat_impl_integral_types()(POrig,QOrig,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:39,143 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,143 pyemd/lib/emd_hat_impl.hpp:456:56: required from ‘emd_hat_impl::NUM_T emd_hat_impl::operator()(const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >&, const std::vector >, std::allocator > > >&, NUM_T, std::vector >, std::allocator > > >*) [with FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW; NUM_T = double]’ 2025-09-08T06:54:39,143 456 | double dist= emd_hat_impl()(iPOrig,iQOrig,iP,iQ,iC,0,&iF); 2025-09-08T06:54:39,144 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,144 pyemd/lib/emd_hat_impl.hpp:57:43: required from ‘NUM_T emd_hat_gd_metric::operator()(const std::vector&, const std::vector&, const std::vector >&, NUM_T, std::vector >*) [with NUM_T = double; FLOW_TYPE_T FLOW_TYPE = WITHOUT_EXTRA_MASS_FLOW]’ 2025-09-08T06:54:39,144 57 | return emd_hat_impl()(Pc,Qc,P,Q,C,extra_mass_penalty,F); 2025-09-08T06:54:39,144 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,144 pyemd/lib/emd_hat.hpp:87:52: required from here 2025-09-08T06:54:39,144 87 | double emd = emd_hat_gd_metric_double_with_flow(P, Q, C, extra_mass_penalty, &flow); 2025-09-08T06:54:39,144 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-08T06:54:39,144 pyemd/lib/min_cost_flow.hpp:405:20: warning: comparison of integer expressions of different signedness: ‘NODE_T’ {aka ‘int’} and ‘std::vector, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:39,144 405 | if ( (l, std::allocator > >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2025-09-08T06:54:39,145 410 | if ( (r -- a caller that pip uses to run setup.py 2025-09-08T06:54:39,656 # 2025-09-08T06:54:39,656 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T06:54:39,656 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T06:54:39,656 # - It provides a clear error message when setuptools is not installed. 2025-09-08T06:54:39,656 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T06:54:39,656 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T06:54:39,656 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T06:54:39,656 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T06:54:39,656 import os, sys, tokenize, traceback 2025-09-08T06:54:39,656 2025-09-08T06:54:39,656 try: 2025-09-08T06:54:39,656 import setuptools 2025-09-08T06:54:39,656 except ImportError: 2025-09-08T06:54:39,656 print( 2025-09-08T06:54:39,656 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T06:54:39,656 "the build environment with exception:", 2025-09-08T06:54:39,656 file=sys.stderr, 2025-09-08T06:54:39,656 ) 2025-09-08T06:54:39,656 traceback.print_exc() 2025-09-08T06:54:39,656 sys.exit(1) 2025-09-08T06:54:39,656 2025-09-08T06:54:39,656 __file__ = %r 2025-09-08T06:54:39,656 sys.argv[0] = __file__ 2025-09-08T06:54:39,656 2025-09-08T06:54:39,656 if os.path.exists(__file__): 2025-09-08T06:54:39,656 filename = __file__ 2025-09-08T06:54:39,656 with tokenize.open(__file__) as f: 2025-09-08T06:54:39,656 setup_py_code = f.read() 2025-09-08T06:54:39,656 else: 2025-09-08T06:54:39,656 filename = "" 2025-09-08T06:54:39,656 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T06:54:39,656 2025-09-08T06:54:39,656 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T06:54:39,656 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-u6wo5nmp[/] 2025-09-08T06:54:39,657 [bold magenta]cwd[/]: /tmp/pip-wheel-ef4hs1zk/pyemd_a43c2ddb712e4481b768efabf914f6cf/ 2025-09-08T06:54:39,657 Building wheel for pyemd (setup.py): finished with status 'error' 2025-09-08T06:54:39,658 ERROR: Failed building wheel for pyemd 2025-09-08T06:54:39,658 Running setup.py clean for pyemd 2025-09-08T06:54:39,659 Running command python setup.py clean 2025-09-08T06:54:40,916 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T06:54:40,916 !! 2025-09-08T06:54:40,916 ******************************************************************************** 2025-09-08T06:54:40,916 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T06:54:40,916 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T06:54:40,917 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T06:54:40,917 or your builds will no longer be supported. 2025-09-08T06:54:40,917 ******************************************************************************** 2025-09-08T06:54:40,917 !! 2025-09-08T06:54:40,917 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T06:54:41,581 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T06:54:41,581 !! 2025-09-08T06:54:41,581 ******************************************************************************** 2025-09-08T06:54:41,581 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T06:54:41,581 License :: OSI Approved :: MIT License 2025-09-08T06:54:41,582 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T06:54:41,582 ******************************************************************************** 2025-09-08T06:54:41,582 !! 2025-09-08T06:54:41,582 self._finalize_license_expression() 2025-09-08T06:54:41,656 running clean 2025-09-08T06:54:41,806 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T06:54:41,806 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T06:54:41,807 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T06:54:41,807 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T06:54:41,807 removing 'build' 2025-09-08T06:54:41,951 Failed to build pyemd 2025-09-08T06:54:41,952 ERROR: Failed to build one or more wheels 2025-09-08T06:54:41,953 Exception information: 2025-09-08T06:54:41,953 Traceback (most recent call last): 2025-09-08T06:54:41,953 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T06:54:41,953 status = _inner_run() 2025-09-08T06:54:41,953 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T06:54:41,953 return self.run(options, args) 2025-09-08T06:54:41,953 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T06:54:41,953 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T06:54:41,953 return func(self, options, args) 2025-09-08T06:54:41,953 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T06:54:41,953 raise CommandError("Failed to build one or more wheels") 2025-09-08T06:54:41,953 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T06:54:41,957 Removed build tracker: '/tmp/pip-build-tracker-hzqsjped'