2025-09-08T07:09:46,689 Created temporary directory: /tmp/pip-build-tracker-vb61jc39
2025-09-08T07:09:46,689 Initialized build tracking at /tmp/pip-build-tracker-vb61jc39
2025-09-08T07:09:46,689 Created build tracker: /tmp/pip-build-tracker-vb61jc39
2025-09-08T07:09:46,690 Entered build tracker: /tmp/pip-build-tracker-vb61jc39
2025-09-08T07:09:46,690 Created temporary directory: /tmp/pip-wheel-hkgr226d
2025-09-08T07:09:46,693 Created temporary directory: /tmp/pip-ephem-wheel-cache-vx7phlpc
2025-09-08T07:09:46,748 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-09-08T07:09:46,751 2 location(s) to search for versions of sygma:
2025-09-08T07:09:46,751 * https://pypi.org/simple/sygma/
2025-09-08T07:09:46,751 * https://www.piwheels.org/simple/sygma/
2025-09-08T07:09:46,751 Fetching project page and analyzing links: https://pypi.org/simple/sygma/
2025-09-08T07:09:46,751 Getting page https://pypi.org/simple/sygma/
2025-09-08T07:09:46,753 Found index url https://pypi.org/simple/
2025-09-08T07:09:46,821 Fetched page https://pypi.org/simple/sygma/ as application/vnd.pypi.simple.v1+json
2025-09-08T07:09:46,822   Found link https://files.pythonhosted.org/packages/ca/a9/f8ce3cc920fa5c0624734531ec487817453c831c25de54e2563f5fcd8103/SyGMa-1.0.tar.gz (from https://pypi.org/simple/sygma/), version: 1.0
2025-09-08T07:09:46,823   Found link https://files.pythonhosted.org/packages/62/9e/65b7fbb38f83e187d5af5db02ec7ae710b909644f6d7731ca5dd8ce13e2f/SyGMa-1.0.1.tar.gz (from https://pypi.org/simple/sygma/), version: 1.0.1
2025-09-08T07:09:46,823   Found link https://files.pythonhosted.org/packages/01/0d/7960ca6076d00ff33bf2aa0ac925074a07820900b8b8ae1edae83d12e488/SyGMa-1.1.0.tar.gz (from https://pypi.org/simple/sygma/), version: 1.1.0
2025-09-08T07:09:46,823 Fetching project page and analyzing links: https://www.piwheels.org/simple/sygma/
2025-09-08T07:09:46,823 Getting page https://www.piwheels.org/simple/sygma/
2025-09-08T07:09:46,824 Found index url https://www.piwheels.org/simple/
2025-09-08T07:09:46,921 Fetched page https://www.piwheels.org/simple/sygma/ as text/html
2025-09-08T07:09:46,922 Skipping link: not a file: https://www.piwheels.org/simple/sygma/
2025-09-08T07:09:46,922 Skipping link: not a file: https://pypi.org/simple/sygma/
2025-09-08T07:09:46,943 Given no hashes to check 1 links for project 'sygma': discarding no candidates
2025-09-08T07:09:46,944 Collecting sygma==1.0.1
2025-09-08T07:09:46,946   Created temporary directory: /tmp/pip-unpack-o5lnhdsj
2025-09-08T07:09:47,083   Downloading SyGMa-1.0.1.tar.gz (13 kB)
2025-09-08T07:09:47,112   Added sygma==1.0.1 from https://files.pythonhosted.org/packages/62/9e/65b7fbb38f83e187d5af5db02ec7ae710b909644f6d7731ca5dd8ce13e2f/SyGMa-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-vb61jc39'
2025-09-08T07:09:47,114   Running setup.py (path:/tmp/pip-wheel-hkgr226d/sygma_4008bb9840804afba7fe59be3efebafb/setup.py) egg_info for package sygma
2025-09-08T07:09:47,114   Created temporary directory: /tmp/pip-pip-egg-info-uf4rf16h
2025-09-08T07:09:47,114   Preparing metadata (setup.py): started
2025-09-08T07:09:47,115   Running command python setup.py egg_info
2025-09-08T07:09:47,626   Traceback (most recent call last):
2025-09-08T07:09:47,627     File "/tmp/pip-wheel-hkgr226d/sygma_4008bb9840804afba7fe59be3efebafb/setup.py", line 14, in <module>
2025-09-08T07:09:47,627       from rdkit.Chem.inchi import INCHI_AVAILABLE
2025-09-08T07:09:47,627   ModuleNotFoundError: No module named 'rdkit'

2025-09-08T07:09:47,627   During handling of the above exception, another exception occurred:

2025-09-08T07:09:47,627   Traceback (most recent call last):
2025-09-08T07:09:47,628     File "<string>", line 2, in <module>
2025-09-08T07:09:47,628       exec(compile('''
2025-09-08T07:09:47,628       ~~~~^^^^^^^^^^^^
2025-09-08T07:09:47,629       # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2025-09-08T07:09:47,629       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,629       ...<32 lines>...
2025-09-08T07:09:47,629       exec(compile(setup_py_code, filename, "exec"))
2025-09-08T07:09:47,629       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,629       ''' % ('/tmp/pip-wheel-hkgr226d/sygma_4008bb9840804afba7fe59be3efebafb/setup.py',), "<pip-setuptools-caller>", "exec"))
2025-09-08T07:09:47,629       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,630     File "<pip-setuptools-caller>", line 35, in <module>
2025-09-08T07:09:47,630     File "/tmp/pip-wheel-hkgr226d/sygma_4008bb9840804afba7fe59be3efebafb/setup.py", line 19, in <module>
2025-09-08T07:09:47,630       raise Exception('RDKit with INCHI support is required')
2025-09-08T07:09:47,630   Exception: RDKit with INCHI support is required
2025-09-08T07:09:47,714   ERROR: python setup.py egg_info exited with 1
2025-09-08T07:09:47,726   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2025-09-08T07:09:47,726   exec(compile('"'"''"'"''"'"'
2025-09-08T07:09:47,726   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2025-09-08T07:09:47,726   #
2025-09-08T07:09:47,726   # - It imports setuptools before invoking setup.py, to enable projects that directly
2025-09-08T07:09:47,726   #   import from `distutils.core` to work with newer packaging standards.
2025-09-08T07:09:47,726   # - It provides a clear error message when setuptools is not installed.
2025-09-08T07:09:47,726   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2025-09-08T07:09:47,726   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2025-09-08T07:09:47,726   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2025-09-08T07:09:47,726   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2025-09-08T07:09:47,726   import os, sys, tokenize, traceback
2025-09-08T07:09:47,726   
2025-09-08T07:09:47,726   try:
2025-09-08T07:09:47,726       import setuptools
2025-09-08T07:09:47,726   except ImportError:
2025-09-08T07:09:47,726       print(
2025-09-08T07:09:47,726           "ERROR: Can not execute `setup.py` since setuptools failed to import in "
2025-09-08T07:09:47,726           "the build environment with exception:",
2025-09-08T07:09:47,726           file=sys.stderr,
2025-09-08T07:09:47,726       )
2025-09-08T07:09:47,726       traceback.print_exc()
2025-09-08T07:09:47,726       sys.exit(1)
2025-09-08T07:09:47,726   
2025-09-08T07:09:47,726   __file__ = %r
2025-09-08T07:09:47,726   sys.argv[0] = __file__
2025-09-08T07:09:47,726   
2025-09-08T07:09:47,726   if os.path.exists(__file__):
2025-09-08T07:09:47,726       filename = __file__
2025-09-08T07:09:47,726       with tokenize.open(__file__) as f:
2025-09-08T07:09:47,726           setup_py_code = f.read()
2025-09-08T07:09:47,726   else:
2025-09-08T07:09:47,726       filename = "<auto-generated setuptools caller>"
2025-09-08T07:09:47,726       setup_py_code = "from setuptools import setup; setup()"
2025-09-08T07:09:47,726   
2025-09-08T07:09:47,726   exec(compile(setup_py_code, filename, "exec"))
2025-09-08T07:09:47,726   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-hkgr226d/sygma_4008bb9840804afba7fe59be3efebafb/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-uf4rf16h[/]
2025-09-08T07:09:47,726   [bold magenta]cwd[/]: /tmp/pip-wheel-hkgr226d/sygma_4008bb9840804afba7fe59be3efebafb/
2025-09-08T07:09:47,726   Preparing metadata (setup.py): finished with status 'error'
2025-09-08T07:09:47,727 ERROR: metadata generation failed
2025-09-08T07:09:47,732 Exception information:
2025-09-08T07:09:47,732 Traceback (most recent call last):
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata
2025-09-08T07:09:47,732     call_subprocess(
2025-09-08T07:09:47,732     ~~~~~~~~~~~~~~~^
2025-09-08T07:09:47,732         args,
2025-09-08T07:09:47,732         ^^^^^
2025-09-08T07:09:47,732     ...<2 lines>...
2025-09-08T07:09:47,732         spinner=spinner,
2025-09-08T07:09:47,732         ^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732     )
2025-09-08T07:09:47,732     ^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess
2025-09-08T07:09:47,732     raise error
2025-09-08T07:09:47,732 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2025-09-08T07:09:47,732 
2025-09-08T07:09:47,732 The above exception was the direct cause of the following exception:
2025-09-08T07:09:47,732 
2025-09-08T07:09:47,732 Traceback (most recent call last):
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper
2025-09-08T07:09:47,732     status = _inner_run()
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run
2025-09-08T07:09:47,732     return self.run(options, args)
2025-09-08T07:09:47,732            ~~~~~~~~^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper
2025-09-08T07:09:47,732     return func(self, options, args)
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2025-09-08T07:09:47,732     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve
2025-09-08T07:09:47,732     result = self._result = resolver.resolve(
2025-09-08T07:09:47,732                             ~~~~~~~~~~~~~~~~^
2025-09-08T07:09:47,732         collected.requirements, max_rounds=limit_how_complex_resolution_can_be
2025-09-08T07:09:47,732         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732     )
2025-09-08T07:09:47,732     ^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve
2025-09-08T07:09:47,732     state = resolution.resolve(requirements, max_rounds=max_rounds)
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve
2025-09-08T07:09:47,732     self._add_to_criteria(self.state.criteria, r, parent=None)
2025-09-08T07:09:47,732     ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria
2025-09-08T07:09:47,732     if not criterion.candidates:
2025-09-08T07:09:47,732            ^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__
2025-09-08T07:09:47,732     return bool(self._sequence)
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__
2025-09-08T07:09:47,732     self._bool = any(self)
2025-09-08T07:09:47,732                  ~~~^^^^^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in <genexpr>
2025-09-08T07:09:47,732     return (c for c in iterator if id(c) not in self._incompatible_ids)
2025-09-08T07:09:47,732                        ^^^^^^^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built
2025-09-08T07:09:47,732     candidate = func()
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link
2025-09-08T07:09:47,732     base: Optional[BaseCandidate] = self._make_base_candidate_from_link(
2025-09-08T07:09:47,732                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
2025-09-08T07:09:47,732         link, template, name, version
2025-09-08T07:09:47,732         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732     )
2025-09-08T07:09:47,732     ^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link
2025-09-08T07:09:47,732     self._link_candidate_cache[link] = LinkCandidate(
2025-09-08T07:09:47,732                                        ~~~~~~~~~~~~~^
2025-09-08T07:09:47,732         link,
2025-09-08T07:09:47,732         ^^^^^
2025-09-08T07:09:47,732     ...<3 lines>...
2025-09-08T07:09:47,732         version=version,
2025-09-08T07:09:47,732         ^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732     )
2025-09-08T07:09:47,732     ^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__
2025-09-08T07:09:47,732     super().__init__(
2025-09-08T07:09:47,732     ~~~~~~~~~~~~~~~~^
2025-09-08T07:09:47,732         link=link,
2025-09-08T07:09:47,732         ^^^^^^^^^^
2025-09-08T07:09:47,732     ...<4 lines>...
2025-09-08T07:09:47,732         version=version,
2025-09-08T07:09:47,732         ^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732     )
2025-09-08T07:09:47,732     ^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__
2025-09-08T07:09:47,732     self.dist = self._prepare()
2025-09-08T07:09:47,732                 ~~~~~~~~~~~~~^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare
2025-09-08T07:09:47,732     dist = self._prepare_distribution()
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution
2025-09-08T07:09:47,732     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2025-09-08T07:09:47,732            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement
2025-09-08T07:09:47,732     return self._prepare_linked_requirement(req, parallel_builds)
2025-09-08T07:09:47,732            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement
2025-09-08T07:09:47,732     dist = _get_prepared_distribution(
2025-09-08T07:09:47,732         req,
2025-09-08T07:09:47,732     ...<3 lines>...
2025-09-08T07:09:47,732         self.check_build_deps,
2025-09-08T07:09:47,732     )
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution
2025-09-08T07:09:47,732     abstract_dist.prepare_distribution_metadata(
2025-09-08T07:09:47,732     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
2025-09-08T07:09:47,732         finder, build_isolation, check_build_deps
2025-09-08T07:09:47,732         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732     )
2025-09-08T07:09:47,732     ^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata
2025-09-08T07:09:47,732     self.req.prepare_metadata()
2025-09-08T07:09:47,732     ~~~~~~~~~~~~~~~~~~~~~~~~~^^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata
2025-09-08T07:09:47,732     self.metadata_directory = generate_metadata_legacy(
2025-09-08T07:09:47,732                               ~~~~~~~~~~~~~~~~~~~~~~~~^
2025-09-08T07:09:47,732         build_env=self.build_env,
2025-09-08T07:09:47,732         ^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732     ...<3 lines>...
2025-09-08T07:09:47,732         details=details,
2025-09-08T07:09:47,732         ^^^^^^^^^^^^^^^^
2025-09-08T07:09:47,732     )
2025-09-08T07:09:47,732     ^
2025-09-08T07:09:47,732   File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata
2025-09-08T07:09:47,732     raise MetadataGenerationFailed(package_details=details) from error
2025-09-08T07:09:47,732 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2025-09-08T07:09:47,753 Removed sygma==1.0.1 from https://files.pythonhosted.org/packages/62/9e/65b7fbb38f83e187d5af5db02ec7ae710b909644f6d7731ca5dd8ce13e2f/SyGMa-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-vb61jc39'
2025-09-08T07:09:47,753 Removed build tracker: '/tmp/pip-build-tracker-vb61jc39'