2025-09-08T07:41:04,361 Created temporary directory: /tmp/pip-build-tracker-5cklcqc5 2025-09-08T07:41:04,362 Initialized build tracking at /tmp/pip-build-tracker-5cklcqc5 2025-09-08T07:41:04,362 Created build tracker: /tmp/pip-build-tracker-5cklcqc5 2025-09-08T07:41:04,362 Entered build tracker: /tmp/pip-build-tracker-5cklcqc5 2025-09-08T07:41:04,362 Created temporary directory: /tmp/pip-wheel-0j3ytbb3 2025-09-08T07:41:04,366 Created temporary directory: /tmp/pip-ephem-wheel-cache-q9pj5o10 2025-09-08T07:41:04,424 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T07:41:04,426 2 location(s) to search for versions of mikado: 2025-09-08T07:41:04,426 * https://pypi.org/simple/mikado/ 2025-09-08T07:41:04,426 * https://www.piwheels.org/simple/mikado/ 2025-09-08T07:41:04,426 Fetching project page and analyzing links: https://pypi.org/simple/mikado/ 2025-09-08T07:41:04,427 Getting page https://pypi.org/simple/mikado/ 2025-09-08T07:41:04,428 Found index url https://pypi.org/simple/ 2025-09-08T07:41:04,497 Fetched page https://pypi.org/simple/mikado/ as application/vnd.pypi.simple.v1+json 2025-09-08T07:41:04,501 Found link https://files.pythonhosted.org/packages/e0/9f/c6c5da77e4164c37427bc069d92e83c8269cdf779a43501403ae837a24b3/Mikado-1.0.0b5.post1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b5.post1 2025-09-08T07:41:04,501 Found link https://files.pythonhosted.org/packages/8f/6c/ee9884cd930db5bfbee812ad1592a32127edbedf01cf28713eda06d5a9b1/Mikado-1.0.0b9.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b9 2025-09-08T07:41:04,501 Found link https://files.pythonhosted.org/packages/7d/c9/edc669907250923ca1113fa140d1965eb25691f57aaff891642d34aaf217/Mikado-1.0.0b10.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b10 2025-09-08T07:41:04,501 Found link https://files.pythonhosted.org/packages/69/15/3551e2856f041aefdd1505656aa8af26b1af04f8e1b4c0448f133724e1f4/Mikado-1.0.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0 2025-09-08T07:41:04,502 Found link https://files.pythonhosted.org/packages/c2/b9/41d0a6f2ebad5eab5bc183beca8de854b4187266c6674ae6da0d86053f63/Mikado-1.1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.1 2025-09-08T07:41:04,502 Found link https://files.pythonhosted.org/packages/40/3d/1158abded48d747b982a77c1badd0d718a174470cdecde82a313f3eb9d4f/Mikado-1.2.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2 2025-09-08T07:41:04,502 Found link https://files.pythonhosted.org/packages/9a/07/5d0790de2c40a36826ac078bf4f7bf62e1fd5848411a784e7eef9fd673c4/Mikado-1.2.1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.1 2025-09-08T07:41:04,502 Found link https://files.pythonhosted.org/packages/35/a8/73f0dfa3062e3744b27ba7dd4c0bfc6af9b23da38c4c0ce8c7d5b27b0757/Mikado-1.2.2.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.2 2025-09-08T07:41:04,502 Skipping link: No binaries permitted for mikado: https://files.pythonhosted.org/packages/f6/7f/d791fd6b5667bf18f4e167803a05fe5c389722ca954dea524259e08121e1/Mikado-1.2.4-cp36-cp36m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/mikado/) 2025-09-08T07:41:04,503 Found link https://files.pythonhosted.org/packages/fc/2d/cc88561deaa5c1b4425855cd821253c68353ed787c7c63dc0f4ea155927e/Mikado-1.2.4.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.4 2025-09-08T07:41:04,503 Found link https://files.pythonhosted.org/packages/36/12/08d60892041a13f4bd13a486fb510844a8ed99961df828e7509e394904e6/Mikado-2.0rc1.tar.gz (from https://pypi.org/simple/mikado/), version: 2.0rc1 2025-09-08T07:41:04,503 Found link https://files.pythonhosted.org/packages/ba/bf/b9a01f43d67eacafe2deea77708497e8523b9cbc9c08d1da4bade64fdb99/Mikado-2.0rc2.tar.gz (from https://pypi.org/simple/mikado/), version: 2.0rc2 2025-09-08T07:41:04,504 Found link https://files.pythonhosted.org/packages/86/6d/f8b099f9637b38fd94c3f164f2c996765b579d2eae62cda48a04f108edb1/Mikado-2.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0 2025-09-08T07:41:04,504 Found link https://files.pythonhosted.org/packages/2e/33/25f4ffb7a3fb20eb2d68ebbb4547dc7c2a26f6c5576a29cca8ba3981a753/Mikado-2.0.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0.1 2025-09-08T07:41:04,504 Found link https://files.pythonhosted.org/packages/3a/6e/c589e961b797498aa99fe23634edda75166679cd2a381b0354a2d1d7b46f/Mikado-2.0.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0.2 2025-09-08T07:41:04,504 Found link https://files.pythonhosted.org/packages/96/ff/815427acc6fb277fe387f6bf7509ad8e374be65f557bbf1f8c7741b21e02/Mikado-2.1.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.1.0 2025-09-08T07:41:04,504 Found link https://files.pythonhosted.org/packages/13/49/571306c6f821dc029a1cb70472498bd9d25525d126f2084798a774f9e4ce/Mikado-2.1.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.1.1 2025-09-08T07:41:04,505 Found link https://files.pythonhosted.org/packages/88/25/93f4d40e98702547602916000e9e8dee101c4e072c29306fcbf9cb6a0797/Mikado-2.2.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.0 2025-09-08T07:41:04,505 Found link https://files.pythonhosted.org/packages/f5/4a/ea11bafcbd376966836c1a70d6500fc63839fe529e8d103df8771057750a/Mikado-2.2.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.1 2025-09-08T07:41:04,505 Found link https://files.pythonhosted.org/packages/d0/ba/88df54116a8a68de82bd668d6fa2189d4a26045b7e0437cdc50bfccf7002/Mikado-2.2.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.2 2025-09-08T07:41:04,505 Found link https://files.pythonhosted.org/packages/28/dd/dec1ae4c7519971dc80a780dde045fce221adffba00535e3ff26de7c29ba/Mikado-2.2.3.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.3 2025-09-08T07:41:04,506 Found link https://files.pythonhosted.org/packages/26/c2/021f128fc8733aa031191d140d26c992a0f62dbd0f974913c7245f208bcf/Mikado-2.2.4.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.2.4 2025-09-08T07:41:04,506 Found link https://files.pythonhosted.org/packages/30/57/69347e6f46b8845741045f2782a5f59bd1a650167bb6be3ddbd38c8c73c5/Mikado-2.2.5.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.2.5 2025-09-08T07:41:04,506 Found link https://files.pythonhosted.org/packages/09/d8/c98c1549bcbb7f37b93d69625d4228b6b6a29a0676e9dece16e3a6061ff6/Mikado-2.3.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.0 2025-09-08T07:41:04,507 Found link https://files.pythonhosted.org/packages/8c/7c/70149e3cca2d6e50f302d7615728ecaade107420be6c7f6b52d2c89135b1/Mikado-2.3.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.1 2025-09-08T07:41:04,507 Found link https://files.pythonhosted.org/packages/d1/90/5867a6616f873700d9bd599edbfefe142307d1c0dcefb02f8106bed2794d/Mikado-2.3.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.2 2025-09-08T07:41:04,507 Found link https://files.pythonhosted.org/packages/37/09/898b9cc9c310317368a4a0a71f818fab51a1f7bea5eee895284036116321/Mikado-2.3.3.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.3 2025-09-08T07:41:04,507 Found link https://files.pythonhosted.org/packages/7c/53/cbd94a6419cb6b85fe392f5e82b2270567a7f3fd3cf381f54f9bd080d4b0/Mikado-2.3.4.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.4 2025-09-08T07:41:04,508 Fetching project page and analyzing links: https://www.piwheels.org/simple/mikado/ 2025-09-08T07:41:04,508 Getting page https://www.piwheels.org/simple/mikado/ 2025-09-08T07:41:04,509 Found index url https://www.piwheels.org/simple/ 2025-09-08T07:41:04,612 Fetched page https://www.piwheels.org/simple/mikado/ as text/html 2025-09-08T07:41:04,641 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp39-cp39-linux_armv6l.whl#sha256=eae7460c0e91feef77b9891ab838d346e9149481f59d271ace65691fd3fab322 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,641 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp39-cp39-linux_armv7l.whl#sha256=eae7460c0e91feef77b9891ab838d346e9149481f59d271ace65691fd3fab322 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,642 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp37-cp37m-linux_armv6l.whl#sha256=d200ed2b907ce98c298ab164a11c61552acec54fed7a727d944b8744bc9c87a5 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,642 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp37-cp37m-linux_armv7l.whl#sha256=d200ed2b907ce98c298ab164a11c61552acec54fed7a727d944b8744bc9c87a5 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,642 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp37-cp37m-linux_armv6l.whl#sha256=b860c76dd2aff5fb774ebbede86a08d05ca2bcc32e188e0a8fc6b3392e132b55 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,642 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp37-cp37m-linux_armv7l.whl#sha256=b860c76dd2aff5fb774ebbede86a08d05ca2bcc32e188e0a8fc6b3392e132b55 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,643 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp39-cp39-linux_armv6l.whl#sha256=8ae20fd6fa9134eaf3b4216aafe499dd03d080f1338d465f819e529b9448178b (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,643 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp39-cp39-linux_armv7l.whl#sha256=8ae20fd6fa9134eaf3b4216aafe499dd03d080f1338d465f819e529b9448178b (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,643 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp37-cp37m-linux_armv6l.whl#sha256=0962ee8458a1d2c09e44acbf646c97dfbbaacb80b1cbc5e1e6546bc3175e9c6c (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,643 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp37-cp37m-linux_armv7l.whl#sha256=0962ee8458a1d2c09e44acbf646c97dfbbaacb80b1cbc5e1e6546bc3175e9c6c (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,644 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp39-cp39-linux_armv6l.whl#sha256=3ee48fa3d96deeb9e0a99617a0e99dca88fb69d47078393f8caa1f08fa35ce8a (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,644 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp39-cp39-linux_armv7l.whl#sha256=3ee48fa3d96deeb9e0a99617a0e99dca88fb69d47078393f8caa1f08fa35ce8a (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,644 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp37-cp37m-linux_armv6l.whl#sha256=fc848e6322df2e3611ca3722bcee0981f195f667bf874a7c6dcea0f9dc0ab731 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,644 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp37-cp37m-linux_armv7l.whl#sha256=fc848e6322df2e3611ca3722bcee0981f195f667bf874a7c6dcea0f9dc0ab731 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,644 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp39-cp39-linux_armv6l.whl#sha256=a38312d4ddc4abf2c34c1de984f3023e216cbaa455158a856480ae4d8e68c745 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,645 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp39-cp39-linux_armv7l.whl#sha256=a38312d4ddc4abf2c34c1de984f3023e216cbaa455158a856480ae4d8e68c745 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,645 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp37-cp37m-linux_armv6l.whl#sha256=4e8abcc783b98e290382b8ec0ee7f385c27700d5a9c1841a7bcae3ea507170a0 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,645 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp37-cp37m-linux_armv7l.whl#sha256=4e8abcc783b98e290382b8ec0ee7f385c27700d5a9c1841a7bcae3ea507170a0 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,645 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp39-cp39-linux_armv6l.whl#sha256=a041f4538b689653924bc0c7bdd03bb29fdda8143a60434de6e2d63aa67cd0c8 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,646 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp39-cp39-linux_armv7l.whl#sha256=a041f4538b689653924bc0c7bdd03bb29fdda8143a60434de6e2d63aa67cd0c8 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,646 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp37-cp37m-linux_armv6l.whl#sha256=5c409502210a8aefb7de44b86fb2ea2a309b92b91226e6b13d4d54725d171baf (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,646 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp37-cp37m-linux_armv7l.whl#sha256=5c409502210a8aefb7de44b86fb2ea2a309b92b91226e6b13d4d54725d171baf (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,646 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp39-cp39-linux_armv6l.whl#sha256=3f743cbc61207059885fe9a59589bf602a3f90a29738ac52092067a0e6422a50 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,646 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp39-cp39-linux_armv7l.whl#sha256=3f743cbc61207059885fe9a59589bf602a3f90a29738ac52092067a0e6422a50 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,646 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp37-cp37m-linux_armv6l.whl#sha256=0754ca2b8f81fbd6eb9ff228073ae59a24073e3f1b7b4ec29b0d65a71e0370a7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,646 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp37-cp37m-linux_armv7l.whl#sha256=0754ca2b8f81fbd6eb9ff228073ae59a24073e3f1b7b4ec29b0d65a71e0370a7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,647 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp39-cp39-linux_armv6l.whl#sha256=867f03bfe6e9cf06e29820272b9f451f30462c4287ebaebebe24b3ee358be321 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,647 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp39-cp39-linux_armv7l.whl#sha256=867f03bfe6e9cf06e29820272b9f451f30462c4287ebaebebe24b3ee358be321 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T07:41:04,647 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.3-cp37-cp37m-linux_armv6l.whl#sha256=0ca20e373c9e6bb78e52fcc63bd76ce297019dc0398a342552de37e05393ec0d (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,647 Skipping link: No binaries permitted for mikado: 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https://archive1.piwheels.org/simple/mikado/Mikado-2.2.0-cp37-cp37m-linux_armv7l.whl#sha256=b280f5816066e0f347dc78973f3dba49da227f44894dd596e0d1d8b968232fe7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,649 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.0-cp39-cp39-linux_armv6l.whl#sha256=a037ee8af5e543296153555c58e9d0ccd04adf06ebcd075b18ce38e5d6b8d676 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,649 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.0-cp39-cp39-linux_armv7l.whl#sha256=a037ee8af5e543296153555c58e9d0ccd04adf06ebcd075b18ce38e5d6b8d676 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,649 Skipping link: No binaries permitted for mikado: 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https://archive1.piwheels.org/simple/mikado/Mikado-2.1.0-cp39-cp39-linux_armv6l.whl#sha256=352b6d95b4ec9833a56b875166ebc51e217328dd6ee9d2740c8931ec1a1f5264 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,650 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.1.0-cp39-cp39-linux_armv7l.whl#sha256=352b6d95b4ec9833a56b875166ebc51e217328dd6ee9d2740c8931ec1a1f5264 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,650 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.2-cp37-cp37m-linux_armv6l.whl#sha256=2f415150126f13a761de3741431aeeeedc7de2714bf481b1082993ad77d07529 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,650 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.2-cp37-cp37m-linux_armv7l.whl#sha256=2f415150126f13a761de3741431aeeeedc7de2714bf481b1082993ad77d07529 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,650 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.2-cp39-cp39-linux_armv6l.whl#sha256=d470f2f06b5088be5229fff70d2f2453c550acccfed8693854613b383c3c2ceb (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,651 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.2-cp39-cp39-linux_armv7l.whl#sha256=d470f2f06b5088be5229fff70d2f2453c550acccfed8693854613b383c3c2ceb (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,651 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.1-cp37-cp37m-linux_armv6l.whl#sha256=aa58f4246ed233041f1947ffec596fd5ddb6bd53113d31be9b6e2c82d87a3554 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,651 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.1-cp37-cp37m-linux_armv7l.whl#sha256=aa58f4246ed233041f1947ffec596fd5ddb6bd53113d31be9b6e2c82d87a3554 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,651 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=650d6cccd0d2d54620080fd88477dcf0ecefa34f7f65887febc654a9daee6938 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T07:41:04,651 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,653 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc2-cp39-cp39-linux_armv7l.whl#sha256=27d920e52482eb28c4c4915cd13022c57b6a2e9b24ab9cbb9c6fb84a57c86006 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,653 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc1-cp35-cp35m-linux_armv6l.whl#sha256=f0c146400dbcde6c6b2b4691d3519ee99863e2f9a5a53473bb658567431c4e58 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,653 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc1-cp35-cp35m-linux_armv7l.whl#sha256=f0c146400dbcde6c6b2b4691d3519ee99863e2f9a5a53473bb658567431c4e58 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,653 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,654 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp34-cp34m-linux_armv6l.whl#sha256=013fe7312e89e4ef0a1cefc59efd6deded6fe09a82e2684638461eefc0d15cec (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,654 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp34-cp34m-linux_armv7l.whl#sha256=013fe7312e89e4ef0a1cefc59efd6deded6fe09a82e2684638461eefc0d15cec (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,654 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp35-cp35m-linux_armv7l.whl#sha256=70805f9e31cbe895eb764eccf40b81eb7dbc61a65ff199ddbefdebde920c1447 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,654 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp35-cp35m-linux_armv6l.whl#sha256=70805f9e31cbe895eb764eccf40b81eb7dbc61a65ff199ddbefdebde920c1447 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,654 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp37-cp37m-linux_armv7l.whl#sha256=8a63835167df1009a262783fca90ce25f88aad46ebf235820d7f21cea9e27926 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,654 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp37-cp37m-linux_armv6l.whl#sha256=8a63835167df1009a262783fca90ce25f88aad46ebf235820d7f21cea9e27926 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,654 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp311-cp311-linux_armv6l.whl#sha256=f046bdaea4a2cf6889ea15964c360551b58427311379d68e8d438b673e4f4d97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,655 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp311-cp311-linux_armv7l.whl#sha256=f046bdaea4a2cf6889ea15964c360551b58427311379d68e8d438b673e4f4d97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,655 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp35-cp35m-linux_armv6l.whl#sha256=6e1e51e81057df0e2d693c84b108c9fc11c0b43b8f11118797d73d7838a9eb6d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,655 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp35-cp35m-linux_armv7l.whl#sha256=6e1e51e81057df0e2d693c84b108c9fc11c0b43b8f11118797d73d7838a9eb6d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,655 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp37-cp37m-linux_armv7l.whl#sha256=61a7b7c61f8476136a43f64ff77f3eedf70a72ac480343a833472539bb9be86a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,655 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp37-cp37m-linux_armv6l.whl#sha256=61a7b7c61f8476136a43f64ff77f3eedf70a72ac480343a833472539bb9be86a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,655 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp311-cp311-linux_armv6l.whl#sha256=69c57b0a7e661700c4d7c775e26f5acf8fc27f2732d78c6325ecbf52106b4225 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,655 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp311-cp311-linux_armv7l.whl#sha256=69c57b0a7e661700c4d7c775e26f5acf8fc27f2732d78c6325ecbf52106b4225 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,656 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp34-cp34m-linux_armv7l.whl#sha256=6302e3b12807435d38dfd802e1b8dc983feb6cea1b55db4e480aec539a5f85bc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,656 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp34-cp34m-linux_armv6l.whl#sha256=6302e3b12807435d38dfd802e1b8dc983feb6cea1b55db4e480aec539a5f85bc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,656 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp35-cp35m-linux_armv6l.whl#sha256=a39e49d25153534bd5c1e6574e84ed72e6814b12ed39527b7e329221e6f1b13d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,656 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp35-cp35m-linux_armv7l.whl#sha256=a39e49d25153534bd5c1e6574e84ed72e6814b12ed39527b7e329221e6f1b13d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,656 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=a2910227f92bec48ad32c61c404cd1b8637bede7fbd684ae3d64df57bbe5ac7b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,656 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=a2910227f92bec48ad32c61c404cd1b8637bede7fbd684ae3d64df57bbe5ac7b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,656 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=02f84927b3a911dd345525ca16e3ca1e880528ab03a545543f33a9cfb49c5f4e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,657 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=02f84927b3a911dd345525ca16e3ca1e880528ab03a545543f33a9cfb49c5f4e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,657 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp35-cp35m-linux_armv7l.whl#sha256=dae54e57e5b7f3185e90e47fa278840a38f8c98d49a7a337b29951bec33ece13 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,657 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp35-cp35m-linux_armv6l.whl#sha256=dae54e57e5b7f3185e90e47fa278840a38f8c98d49a7a337b29951bec33ece13 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,657 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp34-cp34m-linux_armv6l.whl#sha256=4bb34a1ae37485284a0661c2a6a7f1094636a0372a859dcd87d7c0aad94c91cd (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,657 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp34-cp34m-linux_armv7l.whl#sha256=4bb34a1ae37485284a0661c2a6a7f1094636a0372a859dcd87d7c0aad94c91cd (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,657 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp37-cp37m-linux_armv6l.whl#sha256=5a5abadadc716ff22023b6f44b03a9e8049fac6667df41dbf611f0597708a9b7 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,657 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp37-cp37m-linux_armv7l.whl#sha256=5a5abadadc716ff22023b6f44b03a9e8049fac6667df41dbf611f0597708a9b7 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,658 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp311-cp311-linux_armv6l.whl#sha256=8cb994b5e0b5076b40fd77ebadda7a599cb19d680ca175eba47f43e372701c97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,658 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp311-cp311-linux_armv7l.whl#sha256=8cb994b5e0b5076b40fd77ebadda7a599cb19d680ca175eba47f43e372701c97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,658 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp39-cp39-linux_armv6l.whl#sha256=dfcb87da8afbf3806c9ba6ac00eb3fcc32717eecd66839e3981624e0c83102b9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,658 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp39-cp39-linux_armv7l.whl#sha256=dfcb87da8afbf3806c9ba6ac00eb3fcc32717eecd66839e3981624e0c83102b9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,658 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp34-cp34m-linux_armv6l.whl#sha256=ad148a2be64148656d9fd55c8a2767fb7b93b5c4f225dd7f44bc45c779afe4ca (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,658 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp34-cp34m-linux_armv7l.whl#sha256=ad148a2be64148656d9fd55c8a2767fb7b93b5c4f225dd7f44bc45c779afe4ca (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,658 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp35-cp35m-linux_armv6l.whl#sha256=15e4b722560a6b03960c443290d2e84fc46dfb6eef983541141cec45292a850e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,658 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp35-cp35m-linux_armv7l.whl#sha256=15e4b722560a6b03960c443290d2e84fc46dfb6eef983541141cec45292a850e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,659 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp311-cp311-linux_armv6l.whl#sha256=cc5c48ef960792f6929b69b2545baa144ec96b108c7bb51057f8a127f5cf5c31 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,659 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp311-cp311-linux_armv7l.whl#sha256=cc5c48ef960792f6929b69b2545baa144ec96b108c7bb51057f8a127f5cf5c31 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,659 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp35-cp35m-linux_armv7l.whl#sha256=a8d63c41eb54392f132fadff33c5b18e9f67778562711eb50caa98dcbe7f1f84 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,659 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp35-cp35m-linux_armv6l.whl#sha256=a8d63c41eb54392f132fadff33c5b18e9f67778562711eb50caa98dcbe7f1f84 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,659 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp311-cp311-linux_armv6l.whl#sha256=feb40aaa79ce035bee7e7b485c3f920f1f1dcf58ffff5e0305db6afebccbc9fb (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,659 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp311-cp311-linux_armv7l.whl#sha256=feb40aaa79ce035bee7e7b485c3f920f1f1dcf58ffff5e0305db6afebccbc9fb (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,659 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp35-cp35m-linux_armv7l.whl#sha256=5efcb4a1b4a9e814f31e3ac913e4debb0c7eb4eb35328f9c1a7044a7d919efdc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,660 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp35-cp35m-linux_armv6l.whl#sha256=5efcb4a1b4a9e814f31e3ac913e4debb0c7eb4eb35328f9c1a7044a7d919efdc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,660 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp311-cp311-linux_armv6l.whl#sha256=18be66f9bf4e8c24ff8fd2641ca6d9180948f738281c5967e141c01659a4076c (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,660 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp311-cp311-linux_armv7l.whl#sha256=18be66f9bf4e8c24ff8fd2641ca6d9180948f738281c5967e141c01659a4076c (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,660 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b10-cp313-cp313-linux_armv6l.whl#sha256=ffea753ff371f991add460bcf1ac33f764f959d104fbcee732e221437348aa03 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,660 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b10-cp313-cp313-linux_armv7l.whl#sha256=ffea753ff371f991add460bcf1ac33f764f959d104fbcee732e221437348aa03 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,660 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp35-cp35m-linux_armv7l.whl#sha256=20c5fe322f4783bf164ebe1856a68d1f05890b4df93d62a91e5a403942d99a08 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,660 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp35-cp35m-linux_armv6l.whl#sha256=20c5fe322f4783bf164ebe1856a68d1f05890b4df93d62a91e5a403942d99a08 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,661 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp311-cp311-linux_armv6l.whl#sha256=ed7e4964520403c9d79c191483d7a3d9ad8e0b35b77eae60f39cd0f1b5d70b0e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,661 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp311-cp311-linux_armv7l.whl#sha256=ed7e4964520403c9d79c191483d7a3d9ad8e0b35b77eae60f39cd0f1b5d70b0e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,661 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b9-cp313-cp313-linux_armv6l.whl#sha256=feed0441e01e5ed6abdde5aa63f32d8938e0f4396312cde18b80a225e942fe6a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,661 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b9-cp313-cp313-linux_armv7l.whl#sha256=feed0441e01e5ed6abdde5aa63f32d8938e0f4396312cde18b80a225e942fe6a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,661 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp35-cp35m-linux_armv7l.whl#sha256=e42650c477a2db9d73486fb0c1ea7183280ccd2d216a8994a4620148d1208b6b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,661 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp35-cp35m-linux_armv6l.whl#sha256=e42650c477a2db9d73486fb0c1ea7183280ccd2d216a8994a4620148d1208b6b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,661 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp37-cp37m-linux_armv7l.whl#sha256=ad15eb4f2ea89eef0f6fdfacdacafc0005a9554e350cc2e9da31cc8512dfdb15 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,662 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp37-cp37m-linux_armv6l.whl#sha256=ad15eb4f2ea89eef0f6fdfacdacafc0005a9554e350cc2e9da31cc8512dfdb15 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,662 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp311-cp311-linux_armv6l.whl#sha256=bf8598c676e5ac37decb6a90621ec401e89b7791374e961d544d8f1a924a317e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,662 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp311-cp311-linux_armv7l.whl#sha256=bf8598c676e5ac37decb6a90621ec401e89b7791374e961d544d8f1a924a317e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,662 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b5.post1-cp313-cp313-linux_armv6l.whl#sha256=a484381081c56e7106e45ed0d641845f6c7386588a9564360e66d4259c2a30c2 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,662 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b5.post1-cp313-cp313-linux_armv7l.whl#sha256=a484381081c56e7106e45ed0d641845f6c7386588a9564360e66d4259c2a30c2 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T07:41:04,662 Skipping link: not a file: https://www.piwheels.org/simple/mikado/ 2025-09-08T07:41:04,663 Skipping link: not a file: https://pypi.org/simple/mikado/ 2025-09-08T07:41:04,686 Given no hashes to check 1 links for project 'mikado': discarding no candidates 2025-09-08T07:41:04,687 Collecting mikado==1.0 2025-09-08T07:41:04,688 Created temporary directory: /tmp/pip-unpack-0_1oshvk 2025-09-08T07:41:05,531 Downloading Mikado-1.0.tar.gz (17.2 MB) 2025-09-08T07:41:08,825 Added mikado==1.0 from https://files.pythonhosted.org/packages/69/15/3551e2856f041aefdd1505656aa8af26b1af04f8e1b4c0448f133724e1f4/Mikado-1.0.tar.gz to build tracker '/tmp/pip-build-tracker-5cklcqc5' 2025-09-08T07:41:08,826 Running setup.py (path:/tmp/pip-wheel-0j3ytbb3/mikado_684191cf2d3a466fa3fab47c5f058f19/setup.py) egg_info for package mikado 2025-09-08T07:41:08,826 Created temporary directory: /tmp/pip-pip-egg-info-xwsla1if 2025-09-08T07:41:08,826 Preparing metadata (setup.py): started 2025-09-08T07:41:08,827 Running command python setup.py egg_info 2025-09-08T07:41:12,045 Compiling Mikado/utilities/overlap.pyx because it changed. 2025-09-08T07:41:12,045 Compiling Mikado/scales/f1.pyx because it changed. 2025-09-08T07:41:12,045 Compiling Mikado/scales/contrast.pyx because it changed. 2025-09-08T07:41:12,045 Compiling Mikado/utilities/intervaltree.pyx because it changed. 2025-09-08T07:41:12,045 [1/4] Cythonizing Mikado/scales/contrast.pyx 2025-09-08T07:41:12,045 [2/4] Cythonizing Mikado/scales/f1.pyx 2025-09-08T07:41:12,045 [3/4] Cythonizing Mikado/utilities/intervaltree.pyx 2025-09-08T07:41:12,045 [4/4] Cythonizing Mikado/utilities/overlap.pyx 2025-09-08T07:41:12,224 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T07:41:12,224 warnings.warn(msg) 2025-09-08T07:41:12,456 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T07:41:12,456 !! 2025-09-08T07:41:12,456 ******************************************************************************** 2025-09-08T07:41:12,456 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T07:41:12,457 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T07:41:12,457 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T07:41:12,457 ******************************************************************************** 2025-09-08T07:41:12,457 !! 2025-09-08T07:41:12,457 self._finalize_license_expression() 2025-09-08T07:41:12,532 running egg_info 2025-09-08T07:41:12,610 creating /tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info 2025-09-08T07:41:12,610 writing /tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info/PKG-INFO 2025-09-08T07:41:12,613 writing dependency_links to /tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info/dependency_links.txt 2025-09-08T07:41:12,614 writing entry points to /tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info/entry_points.txt 2025-09-08T07:41:12,616 writing requirements to /tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info/requires.txt 2025-09-08T07:41:12,616 writing top-level names to /tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info/top_level.txt 2025-09-08T07:41:12,616 writing manifest file '/tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info/SOURCES.txt' 2025-09-08T07:41:13,007 reading manifest file '/tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info/SOURCES.txt' 2025-09-08T07:41:13,008 reading manifest template 'MANIFEST.in' 2025-09-08T07:41:13,106 warning: no previously-included files matching '*' found under directory 'docs' 2025-09-08T07:41:13,106 adding license file 'AUTHORS' 2025-09-08T07:41:13,125 writing manifest file '/tmp/pip-pip-egg-info-xwsla1if/Mikado.egg-info/SOURCES.txt' 2025-09-08T07:41:13,438 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T07:41:13,443 Source in /tmp/pip-wheel-0j3ytbb3/mikado_684191cf2d3a466fa3fab47c5f058f19 has version 1.0, which satisfies requirement mikado==1.0 from https://files.pythonhosted.org/packages/69/15/3551e2856f041aefdd1505656aa8af26b1af04f8e1b4c0448f133724e1f4/Mikado-1.0.tar.gz 2025-09-08T07:41:13,443 Removed mikado==1.0 from https://files.pythonhosted.org/packages/69/15/3551e2856f041aefdd1505656aa8af26b1af04f8e1b4c0448f133724e1f4/Mikado-1.0.tar.gz from build tracker '/tmp/pip-build-tracker-5cklcqc5' 2025-09-08T07:41:13,453 Created temporary directory: /tmp/pip-unpack-kk_rfvi9 2025-09-08T07:41:13,453 Created temporary directory: /tmp/pip-unpack-91p3_xrc 2025-09-08T07:41:13,454 Building wheels for collected packages: mikado 2025-09-08T07:41:13,455 Created temporary directory: /tmp/pip-wheel-adttin41 2025-09-08T07:41:13,455 DEPRECATION: Building 'mikado' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'mikado'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T07:41:13,457 Building wheel for mikado (setup.py): started 2025-09-08T07:41:13,457 Destination directory: /tmp/pip-wheel-adttin41 2025-09-08T07:41:13,457 Running command python setup.py bdist_wheel 2025-09-08T07:41:14,695 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T07:41:14,695 warnings.warn(msg) 2025-09-08T07:41:14,926 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T07:41:14,926 !! 2025-09-08T07:41:14,926 ******************************************************************************** 2025-09-08T07:41:14,927 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T07:41:14,927 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T07:41:14,927 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T07:41:14,927 ******************************************************************************** 2025-09-08T07:41:14,927 !! 2025-09-08T07:41:14,927 self._finalize_license_expression() 2025-09-08T07:41:14,928 running bdist_wheel 2025-09-08T07:41:15,299 running build 2025-09-08T07:41:15,299 running build_py 2025-09-08T07:41:15,377 creating build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T07:41:15,377 copying Mikado/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T07:41:15,378 copying Mikado/exceptions.py -> build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T07:41:15,379 creating build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T07:41:15,379 copying Mikado/transcripts/transcript.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T07:41:15,380 copying Mikado/transcripts/transcriptchecker.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T07:41:15,380 copying Mikado/transcripts/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T07:41:15,381 copying Mikado/transcripts/clique_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T07:41:15,382 creating build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T07:41:15,382 copying Mikado/parsers/blast_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T07:41:15,383 copying Mikado/parsers/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T07:41:15,383 copying Mikado/parsers/blast_xml.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T07:41:15,384 copying Mikado/parsers/GTF.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T07:41:15,384 copying Mikado/parsers/bed12.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T07:41:15,385 copying Mikado/parsers/gfannotation.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T07:41:15,386 copying Mikado/parsers/GFF.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T07:41:15,386 creating build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T07:41:15,387 copying Mikado/configuration/configurator.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T07:41:15,387 copying Mikado/configuration/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T07:41:15,388 copying Mikado/configuration/daijin_configurator.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T07:41:15,389 creating build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,389 copying Mikado/utilities/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,389 copying Mikado/utilities/log_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,390 copying Mikado/utilities/dbutils.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,391 creating build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,391 copying Mikado/tests/test_modifications.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,392 copying Mikado/tests/parser_testing.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,392 copying Mikado/tests/orf_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,393 copying Mikado/tests/locus_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,394 copying Mikado/tests/test_serialisation.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,394 copying Mikado/tests/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,395 copying Mikado/tests/test_invalid_orfs.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,395 copying Mikado/tests/test_clique_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,396 copying Mikado/tests/test_system_calls.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,397 copying Mikado/tests/test_gene.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,397 copying Mikado/tests/test_db_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,398 copying Mikado/tests/test_blast_related.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,398 copying Mikado/tests/test_transcript_checker.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,399 copying Mikado/tests/intervaltree_tests.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,399 copying Mikado/tests/test_json.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,400 copying Mikado/tests/transcript_tester_negative.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,400 copying Mikado/tests/assigner_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,401 copying Mikado/tests/transcript_tester_positive.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,402 copying Mikado/tests/transcript_tester_single.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,402 copying Mikado/tests/test_splitting.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,403 copying Mikado/tests/test_external_scores.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,403 copying Mikado/tests/test_metrics.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,404 copying Mikado/tests/test_transcript_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,404 copying Mikado/tests/utilities_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,405 creating build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T07:41:15,405 copying Mikado/daijin/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T07:41:15,406 creating build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,407 copying Mikado/loci/locus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,407 copying Mikado/loci/sublocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,408 copying Mikado/loci/excluded.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,408 copying Mikado/loci/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,409 copying Mikado/loci/monosublocusholder.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,409 copying Mikado/loci/superlocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,410 copying Mikado/loci/abstractlocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,411 copying Mikado/loci/reference_gene.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,411 copying Mikado/loci/monosublocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T07:41:15,412 creating build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T07:41:15,412 copying Mikado/picking/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T07:41:15,413 copying Mikado/picking/picker.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T07:41:15,414 copying Mikado/picking/loci_processer.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T07:41:15,415 creating build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T07:41:15,415 copying Mikado/preparation/prepare.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T07:41:15,415 copying Mikado/preparation/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T07:41:15,416 copying Mikado/preparation/annotation_parser.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T07:41:15,417 copying Mikado/preparation/checking.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T07:41:15,417 creating build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T07:41:15,418 copying Mikado/subprograms/__main__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T07:41:15,418 copying Mikado/subprograms/prepare.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T07:41:15,419 copying Mikado/subprograms/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T07:41:15,419 copying Mikado/subprograms/configure.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T07:41:15,420 copying Mikado/subprograms/serialise.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T07:41:15,420 copying Mikado/subprograms/pick.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T07:41:15,421 copying Mikado/subprograms/compare.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T07:41:15,422 creating build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,422 copying Mikado/scales/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,422 copying Mikado/scales/class_codes.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,423 copying Mikado/scales/accountant.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,424 copying Mikado/scales/assigner.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,424 copying Mikado/scales/resultstorer.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,425 copying Mikado/scales/compare.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,426 creating build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T07:41:15,426 copying Mikado/serializers/orf.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T07:41:15,427 copying Mikado/serializers/junction.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T07:41:15,427 copying Mikado/serializers/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T07:41:15,428 copying Mikado/serializers/external.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T07:41:15,428 creating build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T07:41:15,429 copying Mikado/transcripts/transcript_methods/retrieval.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T07:41:15,429 copying Mikado/transcripts/transcript_methods/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T07:41:15,430 copying Mikado/transcripts/transcript_methods/splitting.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T07:41:15,430 copying Mikado/transcripts/transcript_methods/printing.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T07:41:15,431 copying Mikado/transcripts/transcript_methods/finalizing.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T07:41:15,432 creating build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,432 copying Mikado/subprograms/util/awk_gtf.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,433 copying Mikado/subprograms/util/metrics.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,433 copying Mikado/subprograms/util/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,434 copying Mikado/subprograms/util/stats.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,434 copying Mikado/subprograms/util/class_codes.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,435 copying Mikado/subprograms/util/trim.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,435 copying Mikado/subprograms/util/convert.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,436 copying Mikado/subprograms/util/merge_blast.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,436 copying Mikado/subprograms/util/grep.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T07:41:15,437 creating build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T07:41:15,437 copying Mikado/serializers/blast_serializer/utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T07:41:15,438 copying Mikado/serializers/blast_serializer/query.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T07:41:15,439 copying Mikado/serializers/blast_serializer/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T07:41:15,439 copying Mikado/serializers/blast_serializer/xml_serialiser.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T07:41:15,440 copying Mikado/serializers/blast_serializer/target.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T07:41:15,440 copying Mikado/serializers/blast_serializer/hit.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T07:41:15,441 copying Mikado/serializers/blast_serializer/hsp.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T07:41:15,441 running egg_info 2025-09-08T07:41:15,516 writing Mikado.egg-info/PKG-INFO 2025-09-08T07:41:15,519 writing dependency_links to Mikado.egg-info/dependency_links.txt 2025-09-08T07:41:15,520 writing entry points to Mikado.egg-info/entry_points.txt 2025-09-08T07:41:15,522 writing requirements to Mikado.egg-info/requires.txt 2025-09-08T07:41:15,522 writing top-level names to Mikado.egg-info/top_level.txt 2025-09-08T07:41:15,610 reading manifest file 'Mikado.egg-info/SOURCES.txt' 2025-09-08T07:41:15,643 reading manifest template 'MANIFEST.in' 2025-09-08T07:41:15,752 adding license file 'AUTHORS' 2025-09-08T07:41:15,779 writing manifest file 'Mikado.egg-info/SOURCES.txt' 2025-09-08T07:41:15,795 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.configuration.scoring_files' is absent from the `packages` configuration. 2025-09-08T07:41:15,795 !! 2025-09-08T07:41:15,795 ******************************************************************************** 2025-09-08T07:41:15,795 ############################ 2025-09-08T07:41:15,795 # Package would be ignored # 2025-09-08T07:41:15,795 ############################ 2025-09-08T07:41:15,796 Python recognizes 'Mikado.configuration.scoring_files' as an importable package[^1], 2025-09-08T07:41:15,796 but it is absent from setuptools' `packages` configuration. 2025-09-08T07:41:15,796 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T07:41:15,796 package, please make sure that 'Mikado.configuration.scoring_files' is explicitly added 2025-09-08T07:41:15,796 to the `packages` configuration field. 2025-09-08T07:41:15,796 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T07:41:15,796 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T07:41:15,796 instead of `find_packages(...)`/`find:`). 2025-09-08T07:41:15,797 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T07:41:15,797 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T07:41:15,797 If you don't want 'Mikado.configuration.scoring_files' to be distributed and are 2025-09-08T07:41:15,797 already explicitly excluding 'Mikado.configuration.scoring_files' via 2025-09-08T07:41:15,797 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T07:41:15,797 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T07:41:15,797 combination with a more fine grained `package-data` configuration. 2025-09-08T07:41:15,797 You can read more about "package data files" on setuptools documentation page: 2025-09-08T07:41:15,798 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T07:41:15,798 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T07:41:15,798 even if it does not contain any `.py` files. 2025-09-08T07:41:15,798 On the other hand, currently there is no concept of package data 2025-09-08T07:41:15,798 directory, all directories are treated like packages. 2025-09-08T07:41:15,798 ******************************************************************************** 2025-09-08T07:41:15,798 !! 2025-09-08T07:41:15,798 check.warn(importable) 2025-09-08T07:41:15,799 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.tests.__pycache__' is absent from the `packages` configuration. 2025-09-08T07:41:15,799 !! 2025-09-08T07:41:15,799 ******************************************************************************** 2025-09-08T07:41:15,799 ############################ 2025-09-08T07:41:15,799 # Package would be ignored # 2025-09-08T07:41:15,799 ############################ 2025-09-08T07:41:15,799 Python recognizes 'Mikado.tests.__pycache__' as an importable package[^1], 2025-09-08T07:41:15,799 but it is absent from setuptools' `packages` configuration. 2025-09-08T07:41:15,799 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T07:41:15,800 package, please make sure that 'Mikado.tests.__pycache__' is explicitly added 2025-09-08T07:41:15,800 to the `packages` configuration field. 2025-09-08T07:41:15,800 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T07:41:15,800 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T07:41:15,800 instead of `find_packages(...)`/`find:`). 2025-09-08T07:41:15,800 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T07:41:15,800 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T07:41:15,800 If you don't want 'Mikado.tests.__pycache__' to be distributed and are 2025-09-08T07:41:15,801 already explicitly excluding 'Mikado.tests.__pycache__' via 2025-09-08T07:41:15,801 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T07:41:15,801 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T07:41:15,801 combination with a more fine grained `package-data` configuration. 2025-09-08T07:41:15,801 You can read more about "package data files" on setuptools documentation page: 2025-09-08T07:41:15,801 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T07:41:15,801 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T07:41:15,801 even if it does not contain any `.py` files. 2025-09-08T07:41:15,802 On the other hand, currently there is no concept of package data 2025-09-08T07:41:15,802 directory, all directories are treated like packages. 2025-09-08T07:41:15,802 ******************************************************************************** 2025-09-08T07:41:15,802 !! 2025-09-08T07:41:15,802 check.warn(importable) 2025-09-08T07:41:15,802 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.tests.fusion_test' is absent from the `packages` configuration. 2025-09-08T07:41:15,802 !! 2025-09-08T07:41:15,802 ******************************************************************************** 2025-09-08T07:41:15,802 ############################ 2025-09-08T07:41:15,803 # Package would be ignored # 2025-09-08T07:41:15,803 ############################ 2025-09-08T07:41:15,803 Python recognizes 'Mikado.tests.fusion_test' as an importable package[^1], 2025-09-08T07:41:15,803 but it is absent from setuptools' `packages` configuration. 2025-09-08T07:41:15,803 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T07:41:15,803 package, please make sure that 'Mikado.tests.fusion_test' is explicitly added 2025-09-08T07:41:15,803 to the `packages` configuration field. 2025-09-08T07:41:15,803 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T07:41:15,804 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T07:41:15,804 instead of `find_packages(...)`/`find:`). 2025-09-08T07:41:15,804 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T07:41:15,804 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T07:41:15,804 If you don't want 'Mikado.tests.fusion_test' to be distributed and are 2025-09-08T07:41:15,804 already explicitly excluding 'Mikado.tests.fusion_test' via 2025-09-08T07:41:15,804 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T07:41:15,804 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T07:41:15,805 combination with a more fine grained `package-data` configuration. 2025-09-08T07:41:15,805 You can read more about "package data files" on setuptools documentation page: 2025-09-08T07:41:15,805 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T07:41:15,805 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T07:41:15,805 even if it does not contain any `.py` files. 2025-09-08T07:41:15,805 On the other hand, currently there is no concept of package data 2025-09-08T07:41:15,805 directory, all directories are treated like packages. 2025-09-08T07:41:15,805 ******************************************************************************** 2025-09-08T07:41:15,806 !! 2025-09-08T07:41:15,806 check.warn(importable) 2025-09-08T07:41:15,811 copying Mikado/configuration/configuration_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T07:41:15,812 copying Mikado/configuration/daijin_schema.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T07:41:15,813 copying Mikado/configuration/requirements_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T07:41:15,813 copying Mikado/configuration/scoring_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T07:41:15,814 creating build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,814 copying Mikado/configuration/scoring_files/athaliana_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,815 copying Mikado/configuration/scoring_files/celegans_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,815 copying Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,816 copying Mikado/configuration/scoring_files/hsapiens_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,816 copying Mikado/configuration/scoring_files/human.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,817 copying Mikado/configuration/scoring_files/insects.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,817 copying Mikado/configuration/scoring_files/plants.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,818 copying Mikado/configuration/scoring_files/spombe.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,818 copying Mikado/configuration/scoring_files/worm.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T07:41:15,819 copying Mikado/utilities/intervaltree.c -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,823 copying Mikado/utilities/intervaltree.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,824 copying Mikado/utilities/overlap.c -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,826 copying Mikado/utilities/overlap.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,826 copying Mikado/utilities/overlap.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,827 copying Mikado/tests/chr5.fas.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,856 copying Mikado/tests/configuration.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,857 copying Mikado/tests/cufflinks.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,858 copying Mikado/tests/genome.fai -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,858 copying Mikado/tests/junctions.bed -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,859 copying Mikado/tests/mikado.blast.asn.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,860 copying Mikado/tests/mikado.blast.xml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,865 copying Mikado/tests/mikado.db -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,872 copying Mikado/tests/mikado_prepared.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,873 copying Mikado/tests/plants.suspicious_requirement.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,873 copying Mikado/tests/plants.yaml~ -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,874 copying Mikado/tests/scoring_only_cds.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,874 copying Mikado/tests/trinity.cDNA_match.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,875 copying Mikado/tests/trinity.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,875 copying Mikado/tests/trinity.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,876 copying Mikado/tests/trinity.match_matchpart.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,877 copying Mikado/tests/trinity_stats.txt -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,877 copying Mikado/tests/uniprot_sprot_plants.fasta.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T07:41:15,901 creating build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,902 copying Mikado/tests/__pycache__/__init__.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,902 copying Mikado/tests/__pycache__/__init__.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,903 copying Mikado/tests/__pycache__/__init__.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,903 copying Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,904 copying Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,905 copying Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,905 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,906 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,907 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,907 copying Mikado/tests/__pycache__/locus_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,908 copying Mikado/tests/__pycache__/locus_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,909 copying Mikado/tests/__pycache__/locus_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,909 copying Mikado/tests/__pycache__/orf_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,910 copying Mikado/tests/__pycache__/orf_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,911 copying Mikado/tests/__pycache__/orf_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,911 copying Mikado/tests/__pycache__/parser_testing.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,912 copying Mikado/tests/__pycache__/parser_testing.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,912 copying Mikado/tests/__pycache__/parser_testing.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,913 copying Mikado/tests/__pycache__/phases_checker.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,913 copying Mikado/tests/__pycache__/phases_checker.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,914 copying Mikado/tests/__pycache__/system_checks.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,915 copying Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,915 copying Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,916 copying Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,916 copying Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,917 copying Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,917 copying Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,918 copying Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,918 copying Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,919 copying Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,919 copying Mikado/tests/__pycache__/test_external_scores.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,920 copying Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,920 copying Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,921 copying Mikado/tests/__pycache__/test_gene.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,921 copying Mikado/tests/__pycache__/test_gene.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,922 copying Mikado/tests/__pycache__/test_gene.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,922 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,923 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,923 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,924 copying Mikado/tests/__pycache__/test_json.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,924 copying Mikado/tests/__pycache__/test_json.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,925 copying Mikado/tests/__pycache__/test_json.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,925 copying Mikado/tests/__pycache__/test_metrics.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,926 copying Mikado/tests/__pycache__/test_metrics.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,926 copying Mikado/tests/__pycache__/test_metrics.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,927 copying Mikado/tests/__pycache__/test_modifications.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,928 copying Mikado/tests/__pycache__/test_modifications.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,928 copying Mikado/tests/__pycache__/test_modifications.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,929 copying Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,929 copying Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,930 copying Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,930 copying Mikado/tests/__pycache__/test_splitting.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,931 copying Mikado/tests/__pycache__/test_splitting.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,931 copying Mikado/tests/__pycache__/test_splitting.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,932 copying Mikado/tests/__pycache__/test_system_calls.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,932 copying Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,933 copying Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,934 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,934 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,935 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,936 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,936 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,937 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,937 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,938 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,938 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,939 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,940 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,941 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,941 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,942 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,943 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,943 copying Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,944 copying Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,944 copying Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T07:41:15,945 creating build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T07:41:15,945 copying Mikado/tests/fusion_test/fusion_test.log -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T07:41:15,946 copying Mikado/tests/fusion_test/fusion_test_pred.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T07:41:15,946 copying Mikado/tests/fusion_test/fusion_test_ref.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T07:41:15,947 copying Mikado/daijin/example_config.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T07:41:15,947 copying Mikado/daijin/hpc.json -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T07:41:15,948 copying Mikado/daijin/hpc.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T07:41:15,948 copying Mikado/daijin/local.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T07:41:15,949 copying Mikado/daijin/mikado.snakefile -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T07:41:15,949 copying Mikado/daijin/tr.snakefile -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T07:41:15,950 copying Mikado/scales/contrast.c -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,953 copying Mikado/scales/contrast.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,953 copying Mikado/scales/contrast.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,954 copying Mikado/scales/f1.c -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,956 copying Mikado/scales/f1.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,956 copying Mikado/scales/f1.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:15,961 running build_ext 2025-09-08T07:41:15,969 building 'Mikado.utilities.overlap' extension 2025-09-08T07:41:15,969 creating build/temp.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T07:41:15,970 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/utilities/overlap.c -o build/temp.linux-armv7l-cpython-313/Mikado/utilities/overlap.o 2025-09-08T07:41:19,988 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/utilities/overlap.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so 2025-09-08T07:41:20,109 building 'Mikado.scales.f1' extension 2025-09-08T07:41:20,110 creating build/temp.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T07:41:20,110 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/scales/f1.c -o build/temp.linux-armv7l-cpython-313/Mikado/scales/f1.o 2025-09-08T07:41:23,441 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/scales/f1.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so 2025-09-08T07:41:23,561 building 'Mikado.scales.contrast' extension 2025-09-08T07:41:23,562 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/scales/contrast.c -o build/temp.linux-armv7l-cpython-313/Mikado/scales/contrast.o 2025-09-08T07:41:36,106 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/scales/contrast.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so 2025-09-08T07:41:36,226 building 'Mikado.utilities.intervaltree' extension 2025-09-08T07:41:36,227 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/utilities/intervaltree.c -o build/temp.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.o 2025-09-08T07:41:55,845 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so 2025-09-08T07:41:55,984 running build_scripts 2025-09-08T07:41:55,984 creating build/scripts-3.13 2025-09-08T07:41:55,984 copying and adjusting util/trim_long_introns.py -> build/scripts-3.13 2025-09-08T07:41:55,985 copying and adjusting util/asm_collect.py -> build/scripts-3.13 2025-09-08T07:41:55,986 copying and adjusting util/bam2gtf.py -> build/scripts-3.13 2025-09-08T07:41:55,986 copying and adjusting util/self_training.py -> build/scripts-3.13 2025-09-08T07:41:55,987 copying and adjusting util/merge_junction_bed12.py -> build/scripts-3.13 2025-09-08T07:41:55,987 copying and adjusting util/getFastaFromIds.py -> build/scripts-3.13 2025-09-08T07:41:55,988 copying and adjusting util/gffjunc_to_bed12.py -> build/scripts-3.13 2025-09-08T07:41:55,988 copying and adjusting util/sanitize_blast_db.py -> build/scripts-3.13 2025-09-08T07:41:55,989 copying and adjusting util/align_collect.py -> build/scripts-3.13 2025-09-08T07:41:55,989 copying and adjusting util/grep.py -> build/scripts-3.13 2025-09-08T07:41:55,990 copying and adjusting util/add_transcript_feature_to_gtf.py -> build/scripts-3.13 2025-09-08T07:41:55,990 copying and adjusting util/class_run.py -> build/scripts-3.13 2025-09-08T07:41:55,991 copying and adjusting util/split_fasta.py -> build/scripts-3.13 2025-09-08T07:41:55,991 copying and adjusting util/remove_from_embl.py -> build/scripts-3.13 2025-09-08T07:41:55,992 copying and adjusting util/analyse_metrics.py -> build/scripts-3.13 2025-09-08T07:41:55,992 copying and adjusting util/create_model.py -> build/scripts-3.13 2025-09-08T07:41:55,993 changing mode of build/scripts-3.13/trim_long_introns.py from 644 to 755 2025-09-08T07:41:55,993 changing mode of build/scripts-3.13/asm_collect.py from 644 to 755 2025-09-08T07:41:55,993 changing mode of build/scripts-3.13/bam2gtf.py from 644 to 755 2025-09-08T07:41:55,993 changing mode of build/scripts-3.13/self_training.py from 644 to 755 2025-09-08T07:41:55,993 changing mode of build/scripts-3.13/merge_junction_bed12.py from 644 to 755 2025-09-08T07:41:55,993 changing mode of build/scripts-3.13/getFastaFromIds.py from 644 to 755 2025-09-08T07:41:55,993 changing mode of build/scripts-3.13/gffjunc_to_bed12.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/sanitize_blast_db.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/align_collect.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/grep.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/add_transcript_feature_to_gtf.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/class_run.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/split_fasta.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/remove_from_embl.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/analyse_metrics.py from 644 to 755 2025-09-08T07:41:55,994 changing mode of build/scripts-3.13/create_model.py from 644 to 755 2025-09-08T07:41:56,132 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-08T07:41:56,133 !! 2025-09-08T07:41:56,133 ******************************************************************************** 2025-09-08T07:41:56,133 Please avoid running ``setup.py`` directly. 2025-09-08T07:41:56,133 Instead, use pypa/build, pypa/installer or other 2025-09-08T07:41:56,133 standards-based tools. 2025-09-08T07:41:56,133 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T07:41:56,133 or your builds will no longer be supported. 2025-09-08T07:41:56,134 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-08T07:41:56,134 ******************************************************************************** 2025-09-08T07:41:56,134 !! 2025-09-08T07:41:56,134 self.initialize_options() 2025-09-08T07:41:56,209 installing to build/bdist.linux-armv7l/wheel 2025-09-08T07:41:56,209 running install 2025-09-08T07:41:56,232 running install_lib 2025-09-08T07:41:56,307 creating build/bdist.linux-armv7l/wheel 2025-09-08T07:41:56,307 creating build/bdist.linux-armv7l/wheel/Mikado 2025-09-08T07:41:56,308 creating build/bdist.linux-armv7l/wheel/Mikado/serializers 2025-09-08T07:41:56,308 creating build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2025-09-08T07:41:56,308 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/hsp.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T07:41:56,309 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/hit.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T07:41:56,309 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/target.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T07:41:56,310 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/xml_serialiser.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T07:41:56,310 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T07:41:56,311 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/query.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T07:41:56,311 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T07:41:56,311 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/external.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T07:41:56,312 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T07:41:56,312 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/junction.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T07:41:56,313 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/orf.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T07:41:56,313 creating build/bdist.linux-armv7l/wheel/Mikado/scales 2025-09-08T07:41:56,314 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,316 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,317 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,318 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,318 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.c -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,320 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,320 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,321 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.c -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,323 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/compare.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,324 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/resultstorer.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,324 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/assigner.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,325 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/accountant.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,325 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/class_codes.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,326 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T07:41:56,326 creating build/bdist.linux-armv7l/wheel/Mikado/subprograms 2025-09-08T07:41:56,327 creating build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2025-09-08T07:41:56,327 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/grep.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,327 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/merge_blast.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,328 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/convert.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,328 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/trim.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,328 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/class_codes.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,329 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/stats.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,329 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,330 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/metrics.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,330 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/awk_gtf.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T07:41:56,330 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/compare.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T07:41:56,331 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/pick.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T07:41:56,331 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/serialise.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T07:41:56,332 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/configure.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T07:41:56,332 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T07:41:56,332 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/prepare.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T07:41:56,333 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/__main__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T07:41:56,333 creating build/bdist.linux-armv7l/wheel/Mikado/preparation 2025-09-08T07:41:56,334 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/checking.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T07:41:56,334 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/annotation_parser.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T07:41:56,335 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T07:41:56,335 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/prepare.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T07:41:56,336 creating build/bdist.linux-armv7l/wheel/Mikado/picking 2025-09-08T07:41:56,336 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/loci_processer.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T07:41:56,336 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/picker.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T07:41:56,337 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T07:41:56,337 creating build/bdist.linux-armv7l/wheel/Mikado/loci 2025-09-08T07:41:56,338 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/monosublocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,338 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/reference_gene.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,339 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/abstractlocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,339 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/superlocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,340 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/monosublocusholder.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,340 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,341 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/excluded.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,341 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/sublocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,341 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/locus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T07:41:56,342 creating build/bdist.linux-armv7l/wheel/Mikado/daijin 2025-09-08T07:41:56,342 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/tr.snakefile -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T07:41:56,343 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/mikado.snakefile -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T07:41:56,343 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/local.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T07:41:56,344 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/hpc.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T07:41:56,344 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/hpc.json -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T07:41:56,345 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/example_config.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T07:41:56,345 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T07:41:56,346 creating build/bdist.linux-armv7l/wheel/Mikado/tests 2025-09-08T07:41:56,346 creating build/bdist.linux-armv7l/wheel/Mikado/tests/fusion_test 2025-09-08T07:41:56,346 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test_ref.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T07:41:56,347 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test_pred.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T07:41:56,347 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test.log -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T07:41:56,348 creating build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2025-09-08T07:41:56,348 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,348 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,349 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,349 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,350 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,350 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,351 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,351 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,352 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,352 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,353 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,353 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,354 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,354 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,355 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,355 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,356 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,356 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,356 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,357 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,357 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_system_calls.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,358 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_splitting.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,358 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_splitting.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,359 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_splitting.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,359 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,359 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,360 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,360 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_modifications.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,361 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_modifications.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,361 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_modifications.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,361 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_metrics.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,362 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_metrics.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,362 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_metrics.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,362 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_json.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,363 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_json.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,363 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_json.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,364 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,364 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,364 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,365 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_gene.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,365 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_gene.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,365 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_gene.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,366 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,366 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,367 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_external_scores.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,367 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,367 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,368 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,368 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,368 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,369 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,369 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,369 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,370 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,370 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/system_checks.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,371 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/phases_checker.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,371 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/phases_checker.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,371 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/parser_testing.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,372 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/parser_testing.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,372 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/parser_testing.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,372 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/orf_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,373 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/orf_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,373 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/orf_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,374 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/locus_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,374 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/locus_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,375 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/locus_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,376 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,376 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,376 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,377 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,377 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,378 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,378 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,379 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/__init__.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,379 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/__init__.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T07:41:56,379 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/uniprot_sprot_plants.fasta.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,403 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity_stats.txt -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,403 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.match_matchpart.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,404 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,404 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,405 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.cDNA_match.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,405 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/scoring_only_cds.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,406 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/plants.yaml~ -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,406 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/plants.suspicious_requirement.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,406 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado_prepared.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,407 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.db -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,413 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.blast.xml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,418 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.blast.asn.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,419 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/junctions.bed -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,419 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/genome.fai -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,420 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/cufflinks.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,420 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/configuration.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,421 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/chr5.fas.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,450 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/utilities_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,450 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_transcript_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,451 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_metrics.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,451 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_external_scores.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,451 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_splitting.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,452 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_single.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,452 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_positive.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,453 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/assigner_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,454 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_negative.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,454 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_json.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,454 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/intervaltree_tests.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,455 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_transcript_checker.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,455 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_blast_related.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,456 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_db_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,456 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_gene.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,456 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_system_calls.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,457 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_clique_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,457 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_invalid_orfs.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,457 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,458 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_serialisation.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,458 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/locus_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,459 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/orf_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,459 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/parser_testing.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,460 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_modifications.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T07:41:56,460 creating build/bdist.linux-armv7l/wheel/Mikado/utilities 2025-09-08T07:41:56,461 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,465 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,466 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,467 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,467 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.c -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,469 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,469 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.c -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,473 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/dbutils.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,474 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/log_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,474 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T07:41:56,475 creating build/bdist.linux-armv7l/wheel/Mikado/configuration 2025-09-08T07:41:56,475 creating build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2025-09-08T07:41:56,476 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/worm.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,476 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/spombe.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,476 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/plants.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,477 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/insects.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,477 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/human.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,477 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/hsapiens_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,478 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,478 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/celegans_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,478 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/athaliana_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T07:41:56,479 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T07:41:56,479 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/requirements_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T07:41:56,480 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/daijin_schema.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T07:41:56,480 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/configuration_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T07:41:56,480 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/daijin_configurator.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T07:41:56,481 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T07:41:56,481 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/configurator.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T07:41:56,482 creating build/bdist.linux-armv7l/wheel/Mikado/parsers 2025-09-08T07:41:56,482 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/GFF.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T07:41:56,483 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/gfannotation.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T07:41:56,483 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/bed12.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T07:41:56,484 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/GTF.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T07:41:56,484 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/blast_xml.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T07:41:56,484 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T07:41:56,485 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/blast_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T07:41:56,485 creating build/bdist.linux-armv7l/wheel/Mikado/transcripts 2025-09-08T07:41:56,486 creating build/bdist.linux-armv7l/wheel/Mikado/transcripts/transcript_methods 2025-09-08T07:41:56,486 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/finalizing.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T07:41:56,487 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/printing.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T07:41:56,487 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/splitting.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T07:41:56,488 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T07:41:56,488 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/retrieval.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T07:41:56,488 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/clique_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T07:41:56,489 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T07:41:56,489 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcriptchecker.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T07:41:56,490 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T07:41:56,490 copying build/lib.linux-armv7l-cpython-313/Mikado/exceptions.py -> build/bdist.linux-armv7l/wheel/./Mikado 2025-09-08T07:41:56,491 copying build/lib.linux-armv7l-cpython-313/Mikado/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado 2025-09-08T07:41:56,491 running install_egg_info 2025-09-08T07:41:56,570 Copying Mikado.egg-info to build/bdist.linux-armv7l/wheel/./Mikado-1.0-py3.13.egg-info 2025-09-08T07:41:56,572 running install_scripts 2025-09-08T07:41:56,573 creating build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,573 copying build/scripts-3.13/create_model.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,574 copying build/scripts-3.13/analyse_metrics.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,574 copying build/scripts-3.13/remove_from_embl.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,574 copying build/scripts-3.13/split_fasta.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,575 copying build/scripts-3.13/class_run.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,575 copying build/scripts-3.13/add_transcript_feature_to_gtf.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,576 copying build/scripts-3.13/grep.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,576 copying build/scripts-3.13/align_collect.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,576 copying build/scripts-3.13/sanitize_blast_db.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,577 copying build/scripts-3.13/gffjunc_to_bed12.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,577 copying build/scripts-3.13/getFastaFromIds.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,577 copying build/scripts-3.13/merge_junction_bed12.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,578 copying build/scripts-3.13/self_training.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,578 copying build/scripts-3.13/bam2gtf.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,579 copying build/scripts-3.13/asm_collect.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,579 copying build/scripts-3.13/trim_long_introns.py -> build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts 2025-09-08T07:41:56,579 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/create_model.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/analyse_metrics.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/remove_from_embl.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/split_fasta.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/class_run.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/add_transcript_feature_to_gtf.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/grep.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/align_collect.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/sanitize_blast_db.py to 755 2025-09-08T07:41:56,580 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/gffjunc_to_bed12.py to 755 2025-09-08T07:41:56,581 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/getFastaFromIds.py to 755 2025-09-08T07:41:56,581 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/merge_junction_bed12.py to 755 2025-09-08T07:41:56,581 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/self_training.py to 755 2025-09-08T07:41:56,581 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/bam2gtf.py to 755 2025-09-08T07:41:56,581 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/asm_collect.py to 755 2025-09-08T07:41:56,581 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.0.data/scripts/trim_long_introns.py to 755 2025-09-08T07:41:56,632 creating build/bdist.linux-armv7l/wheel/mikado-1.0.dist-info/WHEEL 2025-09-08T07:41:56,633 creating '/tmp/pip-wheel-adttin41/mikado-1.0-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-08T07:41:56,635 adding 'Mikado/__init__.py' 2025-09-08T07:41:56,636 adding 'Mikado/exceptions.py' 2025-09-08T07:41:56,637 adding 'Mikado/configuration/__init__.py' 2025-09-08T07:41:56,640 adding 'Mikado/configuration/configuration_blueprint.json' 2025-09-08T07:41:56,642 adding 'Mikado/configuration/configurator.py' 2025-09-08T07:41:56,643 adding 'Mikado/configuration/daijin_configurator.py' 2025-09-08T07:41:56,645 adding 'Mikado/configuration/daijin_schema.json' 2025-09-08T07:41:56,645 adding 'Mikado/configuration/requirements_blueprint.json' 2025-09-08T07:41:56,646 adding 'Mikado/configuration/scoring_blueprint.json' 2025-09-08T07:41:56,647 adding 'Mikado/configuration/scoring_files/athaliana_scoring.yaml' 2025-09-08T07:41:56,647 adding 'Mikado/configuration/scoring_files/celegans_scoring.yaml' 2025-09-08T07:41:56,648 adding 'Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml' 2025-09-08T07:41:56,649 adding 'Mikado/configuration/scoring_files/hsapiens_scoring.yaml' 2025-09-08T07:41:56,649 adding 'Mikado/configuration/scoring_files/human.yaml' 2025-09-08T07:41:56,650 adding 'Mikado/configuration/scoring_files/insects.yaml' 2025-09-08T07:41:56,651 adding 'Mikado/configuration/scoring_files/plants.yaml' 2025-09-08T07:41:56,652 adding 'Mikado/configuration/scoring_files/spombe.yaml' 2025-09-08T07:41:56,652 adding 'Mikado/configuration/scoring_files/worm.yaml' 2025-09-08T07:41:56,654 adding 'Mikado/daijin/__init__.py' 2025-09-08T07:41:56,655 adding 'Mikado/daijin/example_config.yaml' 2025-09-08T07:41:56,656 adding 'Mikado/daijin/hpc.json' 2025-09-08T07:41:56,656 adding 'Mikado/daijin/hpc.yaml' 2025-09-08T07:41:56,657 adding 'Mikado/daijin/local.yaml' 2025-09-08T07:41:56,659 adding 'Mikado/daijin/mikado.snakefile' 2025-09-08T07:41:56,661 adding 'Mikado/daijin/tr.snakefile' 2025-09-08T07:41:56,662 adding 'Mikado/loci/__init__.py' 2025-09-08T07:41:56,668 adding 'Mikado/loci/abstractlocus.py' 2025-09-08T07:41:56,669 adding 'Mikado/loci/excluded.py' 2025-09-08T07:41:56,673 adding 'Mikado/loci/locus.py' 2025-09-08T07:41:56,674 adding 'Mikado/loci/monosublocus.py' 2025-09-08T07:41:56,676 adding 'Mikado/loci/monosublocusholder.py' 2025-09-08T07:41:56,677 adding 'Mikado/loci/reference_gene.py' 2025-09-08T07:41:56,679 adding 'Mikado/loci/sublocus.py' 2025-09-08T07:41:56,684 adding 'Mikado/loci/superlocus.py' 2025-09-08T07:41:56,686 adding 'Mikado/parsers/GFF.py' 2025-09-08T07:41:56,687 adding 'Mikado/parsers/GTF.py' 2025-09-08T07:41:56,688 adding 'Mikado/parsers/__init__.py' 2025-09-08T07:41:56,690 adding 'Mikado/parsers/bed12.py' 2025-09-08T07:41:56,692 adding 'Mikado/parsers/blast_utils.py' 2025-09-08T07:41:56,696 adding 'Mikado/parsers/blast_xml.py' 2025-09-08T07:41:56,698 adding 'Mikado/parsers/gfannotation.py' 2025-09-08T07:41:56,698 adding 'Mikado/picking/__init__.py' 2025-09-08T07:41:56,702 adding 'Mikado/picking/loci_processer.py' 2025-09-08T07:41:56,706 adding 'Mikado/picking/picker.py' 2025-09-08T07:41:56,707 adding 'Mikado/preparation/__init__.py' 2025-09-08T07:41:56,709 adding 'Mikado/preparation/annotation_parser.py' 2025-09-08T07:41:56,710 adding 'Mikado/preparation/checking.py' 2025-09-08T07:41:56,712 adding 'Mikado/preparation/prepare.py' 2025-09-08T07:41:56,713 adding 'Mikado/scales/__init__.py' 2025-09-08T07:41:56,716 adding 'Mikado/scales/accountant.py' 2025-09-08T07:41:56,720 adding 'Mikado/scales/assigner.py' 2025-09-08T07:41:56,722 adding 'Mikado/scales/class_codes.py' 2025-09-08T07:41:56,724 adding 'Mikado/scales/compare.py' 2025-09-08T07:41:56,773 adding 'Mikado/scales/contrast.c' 2025-09-08T07:41:56,891 adding 'Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T07:41:56,896 adding 'Mikado/scales/contrast.pxd' 2025-09-08T07:41:56,898 adding 'Mikado/scales/contrast.pyx' 2025-09-08T07:41:56,929 adding 'Mikado/scales/f1.c' 2025-09-08T07:41:56,968 adding 'Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T07:41:56,971 adding 'Mikado/scales/f1.pxd' 2025-09-08T07:41:56,971 adding 'Mikado/scales/f1.pyx' 2025-09-08T07:41:56,972 adding 'Mikado/scales/resultstorer.py' 2025-09-08T07:41:56,973 adding 'Mikado/serializers/__init__.py' 2025-09-08T07:41:56,974 adding 'Mikado/serializers/external.py' 2025-09-08T07:41:56,975 adding 'Mikado/serializers/junction.py' 2025-09-08T07:41:56,976 adding 'Mikado/serializers/orf.py' 2025-09-08T07:41:56,977 adding 'Mikado/serializers/blast_serializer/__init__.py' 2025-09-08T07:41:56,978 adding 'Mikado/serializers/blast_serializer/hit.py' 2025-09-08T07:41:56,979 adding 'Mikado/serializers/blast_serializer/hsp.py' 2025-09-08T07:41:56,980 adding 'Mikado/serializers/blast_serializer/query.py' 2025-09-08T07:41:56,981 adding 'Mikado/serializers/blast_serializer/target.py' 2025-09-08T07:41:56,982 adding 'Mikado/serializers/blast_serializer/utils.py' 2025-09-08T07:41:56,985 adding 'Mikado/serializers/blast_serializer/xml_serialiser.py' 2025-09-08T07:41:56,986 adding 'Mikado/subprograms/__init__.py' 2025-09-08T07:41:56,986 adding 'Mikado/subprograms/__main__.py' 2025-09-08T07:41:56,987 adding 'Mikado/subprograms/compare.py' 2025-09-08T07:41:56,989 adding 'Mikado/subprograms/configure.py' 2025-09-08T07:41:56,990 adding 'Mikado/subprograms/pick.py' 2025-09-08T07:41:56,992 adding 'Mikado/subprograms/prepare.py' 2025-09-08T07:41:56,994 adding 'Mikado/subprograms/serialise.py' 2025-09-08T07:41:56,995 adding 'Mikado/subprograms/util/__init__.py' 2025-09-08T07:41:56,995 adding 'Mikado/subprograms/util/awk_gtf.py' 2025-09-08T07:41:56,996 adding 'Mikado/subprograms/util/class_codes.py' 2025-09-08T07:41:56,997 adding 'Mikado/subprograms/util/convert.py' 2025-09-08T07:41:56,998 adding 'Mikado/subprograms/util/grep.py' 2025-09-08T07:41:56,999 adding 'Mikado/subprograms/util/merge_blast.py' 2025-09-08T07:41:56,999 adding 'Mikado/subprograms/util/metrics.py' 2025-09-08T07:41:57,002 adding 'Mikado/subprograms/util/stats.py' 2025-09-08T07:41:57,003 adding 'Mikado/subprograms/util/trim.py' 2025-09-08T07:41:57,004 adding 'Mikado/tests/__init__.py' 2025-09-08T07:41:57,007 adding 'Mikado/tests/assigner_tester.py' 2025-09-08T07:41:57,870 adding 'Mikado/tests/chr5.fas.gz' 2025-09-08T07:41:57,921 adding 'Mikado/tests/configuration.yaml' 2025-09-08T07:41:57,922 adding 'Mikado/tests/cufflinks.gtf' 2025-09-08T07:41:57,923 adding 'Mikado/tests/genome.fai' 2025-09-08T07:41:57,924 adding 'Mikado/tests/intervaltree_tests.py' 2025-09-08T07:41:57,928 adding 'Mikado/tests/junctions.bed' 2025-09-08T07:41:57,933 adding 'Mikado/tests/locus_tester.py' 2025-09-08T07:41:57,958 adding 'Mikado/tests/mikado.blast.asn.gz' 2025-09-08T07:41:58,010 adding 'Mikado/tests/mikado.blast.xml' 2025-09-08T07:41:58,277 adding 'Mikado/tests/mikado.db' 2025-09-08T07:41:58,292 adding 'Mikado/tests/mikado_prepared.gtf' 2025-09-08T07:41:58,297 adding 'Mikado/tests/orf_tester.py' 2025-09-08T07:41:58,298 adding 'Mikado/tests/parser_testing.py' 2025-09-08T07:41:58,299 adding 'Mikado/tests/plants.suspicious_requirement.yaml' 2025-09-08T07:41:58,299 adding 'Mikado/tests/plants.yaml~' 2025-09-08T07:41:58,300 adding 'Mikado/tests/scoring_only_cds.yaml' 2025-09-08T07:41:58,301 adding 'Mikado/tests/test_blast_related.py' 2025-09-08T07:41:58,301 adding 'Mikado/tests/test_clique_methods.py' 2025-09-08T07:41:58,302 adding 'Mikado/tests/test_db_utils.py' 2025-09-08T07:41:58,303 adding 'Mikado/tests/test_external_scores.py' 2025-09-08T07:41:58,304 adding 'Mikado/tests/test_gene.py' 2025-09-08T07:41:58,304 adding 'Mikado/tests/test_invalid_orfs.py' 2025-09-08T07:41:58,305 adding 'Mikado/tests/test_json.py' 2025-09-08T07:41:58,306 adding 'Mikado/tests/test_metrics.py' 2025-09-08T07:41:58,307 adding 'Mikado/tests/test_modifications.py' 2025-09-08T07:41:58,308 adding 'Mikado/tests/test_serialisation.py' 2025-09-08T07:41:58,309 adding 'Mikado/tests/test_splitting.py' 2025-09-08T07:41:58,311 adding 'Mikado/tests/test_system_calls.py' 2025-09-08T07:41:58,313 adding 'Mikado/tests/test_transcript_checker.py' 2025-09-08T07:41:58,314 adding 'Mikado/tests/test_transcript_methods.py' 2025-09-08T07:41:58,316 adding 'Mikado/tests/transcript_tester_negative.py' 2025-09-08T07:41:58,319 adding 'Mikado/tests/transcript_tester_positive.py' 2025-09-08T07:41:58,322 adding 'Mikado/tests/transcript_tester_single.py' 2025-09-08T07:41:58,323 adding 'Mikado/tests/trinity.cDNA_match.gff3' 2025-09-08T07:41:58,325 adding 'Mikado/tests/trinity.gff3' 2025-09-08T07:41:58,327 adding 'Mikado/tests/trinity.gtf' 2025-09-08T07:41:58,328 adding 'Mikado/tests/trinity.match_matchpart.gff3' 2025-09-08T07:41:58,329 adding 'Mikado/tests/trinity_stats.txt' 2025-09-08T07:41:59,036 adding 'Mikado/tests/uniprot_sprot_plants.fasta.gz' 2025-09-08T07:41:59,078 adding 'Mikado/tests/utilities_tester.py' 2025-09-08T07:41:59,079 adding 'Mikado/tests/__pycache__/__init__.cpython-34.pyc' 2025-09-08T07:41:59,079 adding 'Mikado/tests/__pycache__/__init__.cpython-35.pyc' 2025-09-08T07:41:59,080 adding 'Mikado/tests/__pycache__/__init__.cpython-36.pyc' 2025-09-08T07:41:59,084 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc' 2025-09-08T07:41:59,088 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc' 2025-09-08T07:41:59,091 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc' 2025-09-08T07:41:59,093 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc' 2025-09-08T07:41:59,095 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc' 2025-09-08T07:41:59,096 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc' 2025-09-08T07:41:59,102 adding 'Mikado/tests/__pycache__/locus_tester.cpython-34.pyc' 2025-09-08T07:41:59,108 adding 'Mikado/tests/__pycache__/locus_tester.cpython-35.pyc' 2025-09-08T07:41:59,115 adding 'Mikado/tests/__pycache__/locus_tester.cpython-36.pyc' 2025-09-08T07:41:59,120 adding 'Mikado/tests/__pycache__/orf_tester.cpython-34.pyc' 2025-09-08T07:41:59,126 adding 'Mikado/tests/__pycache__/orf_tester.cpython-35.pyc' 2025-09-08T07:41:59,131 adding 'Mikado/tests/__pycache__/orf_tester.cpython-36.pyc' 2025-09-08T07:41:59,132 adding 'Mikado/tests/__pycache__/parser_testing.cpython-34.pyc' 2025-09-08T07:41:59,133 adding 'Mikado/tests/__pycache__/parser_testing.cpython-35.pyc' 2025-09-08T07:41:59,133 adding 'Mikado/tests/__pycache__/parser_testing.cpython-36.pyc' 2025-09-08T07:41:59,134 adding 'Mikado/tests/__pycache__/phases_checker.cpython-34.pyc' 2025-09-08T07:41:59,135 adding 'Mikado/tests/__pycache__/phases_checker.cpython-35.pyc' 2025-09-08T07:41:59,137 adding 'Mikado/tests/__pycache__/system_checks.cpython-35.pyc' 2025-09-08T07:41:59,138 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc' 2025-09-08T07:41:59,139 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc' 2025-09-08T07:41:59,140 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc' 2025-09-08T07:41:59,141 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc' 2025-09-08T07:41:59,142 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc' 2025-09-08T07:41:59,143 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc' 2025-09-08T07:41:59,144 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc' 2025-09-08T07:41:59,145 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc' 2025-09-08T07:41:59,146 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc' 2025-09-08T07:41:59,147 adding 'Mikado/tests/__pycache__/test_external_scores.cpython-34.pyc' 2025-09-08T07:41:59,147 adding 'Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc' 2025-09-08T07:41:59,148 adding 'Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc' 2025-09-08T07:41:59,149 adding 'Mikado/tests/__pycache__/test_gene.cpython-34.pyc' 2025-09-08T07:41:59,149 adding 'Mikado/tests/__pycache__/test_gene.cpython-35.pyc' 2025-09-08T07:41:59,150 adding 'Mikado/tests/__pycache__/test_gene.cpython-36.pyc' 2025-09-08T07:41:59,151 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc' 2025-09-08T07:41:59,152 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc' 2025-09-08T07:41:59,153 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc' 2025-09-08T07:41:59,154 adding 'Mikado/tests/__pycache__/test_json.cpython-34.pyc' 2025-09-08T07:41:59,155 adding 'Mikado/tests/__pycache__/test_json.cpython-35.pyc' 2025-09-08T07:41:59,156 adding 'Mikado/tests/__pycache__/test_json.cpython-36.pyc' 2025-09-08T07:41:59,157 adding 'Mikado/tests/__pycache__/test_metrics.cpython-34.pyc' 2025-09-08T07:41:59,158 adding 'Mikado/tests/__pycache__/test_metrics.cpython-35.pyc' 2025-09-08T07:41:59,159 adding 'Mikado/tests/__pycache__/test_metrics.cpython-36.pyc' 2025-09-08T07:41:59,160 adding 'Mikado/tests/__pycache__/test_modifications.cpython-34.pyc' 2025-09-08T07:41:59,161 adding 'Mikado/tests/__pycache__/test_modifications.cpython-35.pyc' 2025-09-08T07:41:59,162 adding 'Mikado/tests/__pycache__/test_modifications.cpython-36.pyc' 2025-09-08T07:41:59,163 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc' 2025-09-08T07:41:59,164 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc' 2025-09-08T07:41:59,165 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc' 2025-09-08T07:41:59,167 adding 'Mikado/tests/__pycache__/test_splitting.cpython-34.pyc' 2025-09-08T07:41:59,168 adding 'Mikado/tests/__pycache__/test_splitting.cpython-35.pyc' 2025-09-08T07:41:59,169 adding 'Mikado/tests/__pycache__/test_splitting.cpython-36.pyc' 2025-09-08T07:41:59,173 adding 'Mikado/tests/__pycache__/test_system_calls.cpython-34.pyc' 2025-09-08T07:41:59,177 adding 'Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc' 2025-09-08T07:41:59,180 adding 'Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc' 2025-09-08T07:41:59,182 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc' 2025-09-08T07:41:59,183 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc' 2025-09-08T07:41:59,184 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc' 2025-09-08T07:41:59,186 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc' 2025-09-08T07:41:59,188 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc' 2025-09-08T07:41:59,190 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc' 2025-09-08T07:41:59,192 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc' 2025-09-08T07:41:59,195 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc' 2025-09-08T07:41:59,198 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc' 2025-09-08T07:41:59,202 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc' 2025-09-08T07:41:59,207 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc' 2025-09-08T07:41:59,212 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc' 2025-09-08T07:41:59,215 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc' 2025-09-08T07:41:59,219 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc' 2025-09-08T07:41:59,222 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc' 2025-09-08T07:41:59,223 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc' 2025-09-08T07:41:59,224 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc' 2025-09-08T07:41:59,226 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc' 2025-09-08T07:41:59,226 adding 'Mikado/tests/fusion_test/fusion_test.log' 2025-09-08T07:41:59,227 adding 'Mikado/tests/fusion_test/fusion_test_pred.gtf' 2025-09-08T07:41:59,228 adding 'Mikado/tests/fusion_test/fusion_test_ref.gff3' 2025-09-08T07:41:59,228 adding 'Mikado/transcripts/__init__.py' 2025-09-08T07:41:59,229 adding 'Mikado/transcripts/clique_methods.py' 2025-09-08T07:41:59,240 adding 'Mikado/transcripts/transcript.py' 2025-09-08T07:41:59,242 adding 'Mikado/transcripts/transcriptchecker.py' 2025-09-08T07:41:59,243 adding 'Mikado/transcripts/transcript_methods/__init__.py' 2025-09-08T07:41:59,245 adding 'Mikado/transcripts/transcript_methods/finalizing.py' 2025-09-08T07:41:59,247 adding 'Mikado/transcripts/transcript_methods/printing.py' 2025-09-08T07:41:59,249 adding 'Mikado/transcripts/transcript_methods/retrieval.py' 2025-09-08T07:41:59,253 adding 'Mikado/transcripts/transcript_methods/splitting.py' 2025-09-08T07:41:59,254 adding 'Mikado/utilities/__init__.py' 2025-09-08T07:41:59,255 adding 'Mikado/utilities/dbutils.py' 2025-09-08T07:41:59,324 adding 'Mikado/utilities/intervaltree.c' 2025-09-08T07:41:59,537 adding 'Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T07:41:59,546 adding 'Mikado/utilities/intervaltree.pyx' 2025-09-08T07:41:59,547 adding 'Mikado/utilities/log_utils.py' 2025-09-08T07:41:59,579 adding 'Mikado/utilities/overlap.c' 2025-09-08T07:41:59,629 adding 'Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T07:41:59,631 adding 'Mikado/utilities/overlap.pxd' 2025-09-08T07:41:59,632 adding 'Mikado/utilities/overlap.pyx' 2025-09-08T07:41:59,632 adding 'mikado-1.0.data/scripts/add_transcript_feature_to_gtf.py' 2025-09-08T07:41:59,633 adding 'mikado-1.0.data/scripts/align_collect.py' 2025-09-08T07:41:59,634 adding 'mikado-1.0.data/scripts/analyse_metrics.py' 2025-09-08T07:41:59,635 adding 'mikado-1.0.data/scripts/asm_collect.py' 2025-09-08T07:41:59,635 adding 'mikado-1.0.data/scripts/bam2gtf.py' 2025-09-08T07:41:59,636 adding 'mikado-1.0.data/scripts/class_run.py' 2025-09-08T07:41:59,638 adding 'mikado-1.0.data/scripts/create_model.py' 2025-09-08T07:41:59,638 adding 'mikado-1.0.data/scripts/getFastaFromIds.py' 2025-09-08T07:41:59,639 adding 'mikado-1.0.data/scripts/gffjunc_to_bed12.py' 2025-09-08T07:41:59,640 adding 'mikado-1.0.data/scripts/grep.py' 2025-09-08T07:41:59,641 adding 'mikado-1.0.data/scripts/merge_junction_bed12.py' 2025-09-08T07:41:59,641 adding 'mikado-1.0.data/scripts/remove_from_embl.py' 2025-09-08T07:41:59,642 adding 'mikado-1.0.data/scripts/sanitize_blast_db.py' 2025-09-08T07:41:59,643 adding 'mikado-1.0.data/scripts/self_training.py' 2025-09-08T07:41:59,644 adding 'mikado-1.0.data/scripts/split_fasta.py' 2025-09-08T07:41:59,645 adding 'mikado-1.0.data/scripts/trim_long_introns.py' 2025-09-08T07:41:59,646 adding 'mikado-1.0.dist-info/licenses/AUTHORS' 2025-09-08T07:41:59,647 adding 'mikado-1.0.dist-info/METADATA' 2025-09-08T07:41:59,647 adding 'mikado-1.0.dist-info/WHEEL' 2025-09-08T07:41:59,648 adding 'mikado-1.0.dist-info/entry_points.txt' 2025-09-08T07:41:59,648 adding 'mikado-1.0.dist-info/top_level.txt' 2025-09-08T07:41:59,652 adding 'mikado-1.0.dist-info/RECORD' 2025-09-08T07:41:59,654 removing build/bdist.linux-armv7l/wheel 2025-09-08T07:41:59,817 Building wheel for mikado (setup.py): finished with status 'done' 2025-09-08T07:41:59,994 Created wheel for mikado: filename=mikado-1.0-cp313-cp313-linux_armv7l.whl size=17721954 sha256=7b05ef72b23835adf1757bbd0efb0cd8d5f5e3f9b505e72a913aef68936edead 2025-09-08T07:41:59,994 Stored in directory: /tmp/pip-ephem-wheel-cache-q9pj5o10/wheels/08/45/a1/cad3e71bc8bd7fbe2ac7101dae226bc3c5f4fc4cd2d25ffb41 2025-09-08T07:42:00,008 Successfully built mikado 2025-09-08T07:42:00,045 Removed build tracker: '/tmp/pip-build-tracker-5cklcqc5'