2025-09-08T08:16:33,444 Created temporary directory: /tmp/pip-build-tracker-xukauc4u 2025-09-08T08:16:33,444 Initialized build tracking at /tmp/pip-build-tracker-xukauc4u 2025-09-08T08:16:33,444 Created build tracker: /tmp/pip-build-tracker-xukauc4u 2025-09-08T08:16:33,444 Entered build tracker: /tmp/pip-build-tracker-xukauc4u 2025-09-08T08:16:33,445 Created temporary directory: /tmp/pip-wheel-hvcurikc 2025-09-08T08:16:33,448 Created temporary directory: /tmp/pip-ephem-wheel-cache-c6d2hby1 2025-09-08T08:16:33,508 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T08:16:33,510 2 location(s) to search for versions of khmer: 2025-09-08T08:16:33,510 * https://pypi.org/simple/khmer/ 2025-09-08T08:16:33,510 * https://www.piwheels.org/simple/khmer/ 2025-09-08T08:16:33,510 Fetching project page and analyzing links: https://pypi.org/simple/khmer/ 2025-09-08T08:16:33,511 Getting page https://pypi.org/simple/khmer/ 2025-09-08T08:16:33,512 Found index url https://pypi.org/simple/ 2025-09-08T08:16:33,581 Fetched page https://pypi.org/simple/khmer/ as application/vnd.pypi.simple.v1+json 2025-09-08T08:16:33,586 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/a5/8e/d814af49f243e9628cc68cf9a89a290fa761a1acdfbf4044e69bb5f3185b/khmer-0.6-py2.7-linux-x86_64.egg (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,587 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f1/61/71c0e5b337f3fb110d22314a90985f58d2a643c8fe701dd832f7a3b3cbe7/khmer-0.6-py2.7-macosx-10.8-intel.egg (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,587 Found link https://files.pythonhosted.org/packages/b9/d6/e343a534406110221eb690dc3ffa7548f03f2d51c4d9d407bf2e72278861/khmer-0.6.tar.gz (from https://pypi.org/simple/khmer/), version: 0.6 2025-09-08T08:16:33,587 Found link https://files.pythonhosted.org/packages/81/89/085bcb663ac1bd3a0b363b5a1de8f5a1c7d3b10e4a3ec197c976c2911ab9/khmer-0.6.1.tar.gz (from https://pypi.org/simple/khmer/), version: 0.6.1 2025-09-08T08:16:33,587 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/74/ff/a33663f83fd01cd5ffc9903d8116bd3dfc065f1f865db5c91b080991690b/khmer-0.7-cp27-none-macosx_10_8_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,587 Found link https://files.pythonhosted.org/packages/3a/bd/b1eb804f77e6ea99f9db02688c1474628d844e2f59a4f77d7bc00f8c990b/khmer-0.7.tar.gz (from https://pypi.org/simple/khmer/), version: 0.7 2025-09-08T08:16:33,588 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/d5/8b/ae021e29186d3f9ed8cfdd4f8a81db44f7d4105446dc9e119afd908eea21/khmer-0.7.1-cp27-none-macosx_10_8_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,588 Found link https://files.pythonhosted.org/packages/92/11/b17b809e155f35cfc17710ea67b7515b6025e141de6506a4af4e32e32b70/khmer-0.7.1.tar.gz (from https://pypi.org/simple/khmer/), version: 0.7.1 2025-09-08T08:16:33,588 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/84/a8/09ee794b0db1cc2b113a4f2f56beb325769389c35b48f802289d67297e24/khmer-0.8-cp27-none-macosx_10_9_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,588 Found link https://files.pythonhosted.org/packages/31/8f/7063987e7713dfbcd05bc53e4778c2284e3ea905112fc97d83d03afa60d9/khmer-0.8.tar.gz (from https://pypi.org/simple/khmer/), version: 0.8 2025-09-08T08:16:33,588 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/4e/6c/33badfa2550b73b7f037afa2e37aa09b7506b5dbd58175b0c24f40ed8179/khmer-1.0-cp27-none-macosx_10_9_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,589 Found link https://files.pythonhosted.org/packages/67/d0/334f8bba7befb5d671bf5663d1073c73cba841f13088d6426b93dbb884ce/khmer-1.0.tar.gz (from https://pypi.org/simple/khmer/), version: 1.0 2025-09-08T08:16:33,589 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/fd/a6/5b64bad521c070581ecb1f22ecfcb33d2b297ec353094438d807028e4be0/khmer-1.0.1-cp27-none-macosx_10_9_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,589 Found link https://files.pythonhosted.org/packages/4e/73/cebb5f4952d79693ddd5c8a9efac21883f1b4cdff1d046adb2df1f2070bd/khmer-1.0.1.tar.gz (from https://pypi.org/simple/khmer/), version: 1.0.1 2025-09-08T08:16:33,589 Found link https://files.pythonhosted.org/packages/df/66/250be153108b73fa745d22b0e141d6d922cd011b6cda2233d46d34bcc596/khmer-1.1.tar.gz (from https://pypi.org/simple/khmer/), version: 1.1 2025-09-08T08:16:33,589 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/6d/0b/97e3dd8339736c4f4ebf3906274bcf972b2d308bb76db1702c187bfbd9fd/khmer-1.2-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,590 Found link https://files.pythonhosted.org/packages/b8/b5/8143587dd5eba9204dea9eab50b990656b70e03538a44af56eec11a28f02/khmer-1.2.tar.gz (from https://pypi.org/simple/khmer/), version: 1.2 2025-09-08T08:16:33,590 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/41/7a/d94ad453d04782d82aebe7825ef4f1a38fc9e3374b0b3cfe9b1c5400482e/khmer-1.3-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,590 Found link https://files.pythonhosted.org/packages/6c/cf/37bd5901fe1322b59cd2cece9c53661944e18dddba3e8ebf2aa2d7834113/khmer-1.3.tar.gz (from https://pypi.org/simple/khmer/), version: 1.3 2025-09-08T08:16:33,590 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/89/b4/310a7e99bac77a488cc482f4184480aa803f65bad8ffacb961c94f819335/khmer-1.4-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,590 Found link https://files.pythonhosted.org/packages/5a/91/eb0c9a5fdab42699c56b8c60d0d02e806f4d4d42f809061eb9a1a9a59dfa/khmer-1.4.tar.gz (from https://pypi.org/simple/khmer/), version: 1.4 2025-09-08T08:16:33,590 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/5c/44/1d4273abe1bf162cd1a8c8d5424cec23e65971f90951659a0b590beaf364/khmer-1.4.1-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,591 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/96/b7/76a047a594778ad4d2646754e4454ac9d484b7e64548ebed24362c5aba4f/khmer-1.4.1-cp27-none-macosx_10_6_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,591 Found link https://files.pythonhosted.org/packages/5e/16/15243a0612c798595e8dd8bdf0477a7ce065929b9de5dbfebdf461006f05/khmer-1.4.1.tar.gz (from https://pypi.org/simple/khmer/), version: 1.4.1 2025-09-08T08:16:33,591 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/5d/f6/791f79f68be58cb20c6426726063d742b3dd778b222873cb9f01ab65bc09/khmer-2.0-cp27-none-macosx_10_6_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,591 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/22/37/6c6fb54d9b8feb8a64e52e6e16cd409bc47d8240294caf8449fac6523f64/khmer-2.0-cp33-cp33m-macosx_10_6_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,591 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/69/21/de9ff69a24a90e6f4e788b57a6d911b046cbc768436060c18a0c18c2e187/khmer-2.0-cp34-cp34m-macosx_10_6_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,591 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/36/cb/4a1638d5ca5a9b0d53c1b5484cefdcda9f3079bfb0b92e2ae2fac6d83bfd/khmer-2.0-cp35-cp35m-macosx_10_6_intel.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,592 Found link https://files.pythonhosted.org/packages/52/3b/2c52a13937197391775f274ed75b4a33b2d7767a904faaf4032e14e10a55/khmer-2.0.tar.gz (from https://pypi.org/simple/khmer/), version: 2.0 2025-09-08T08:16:33,592 Found link https://files.pythonhosted.org/packages/57/17/a1f05b13895e02cadeac06d61f7ea63e8c32eda38312d57e9ba218d0ca9b/khmer-2.1rc3.tar.gz (from https://pypi.org/simple/khmer/), version: 2.1rc3 2025-09-08T08:16:33,592 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/c9/bb/8cccf9bf31082b3d78aa628ca62e8603f81de83b7a5056f0ce026cfb50fd/khmer-2.1-cp36-cp36m-macosx_10_12_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,592 Found link https://files.pythonhosted.org/packages/3e/e5/b3190cb9def69d665b42cd91ea27712f1d7de643f4b9c66ef2e5f1ab29c6/khmer-2.1.tar.gz (from https://pypi.org/simple/khmer/), version: 2.1 2025-09-08T08:16:33,592 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/d3/55/d3f5da570677903679e0c40aa4b93323853ebe15e75944b4a0d7d25d11c8/khmer-2.1.1-cp27-cp27m-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,593 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/40/5a/328d310361d98bb2f29361128eaa2493f44b51997d6837c72f1766c4ec7b/khmer-2.1.1-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,593 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/34/a5/f3815d5ec3ee20f884f140ae4a2f253ae6d59885684fa8adc5525a9ed4f4/khmer-2.1.1-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,593 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/5f/7a/dd356f3b267d2adf079deebdd94590e42edbc376a2058759ff78ee6a75c5/khmer-2.1.1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,593 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/3f/1e/931281ac388cbb15d40319d0dcd54cfc3f1d972da5de2fa3063facedc966/khmer-2.1.1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2025-09-08T08:16:33,593 Found link https://files.pythonhosted.org/packages/78/c9/caee0a310f249c86fd351706d2513e197e036231f4db6f3bda7a363ea1c4/khmer-2.1.1.tar.gz (from https://pypi.org/simple/khmer/), version: 2.1.1 2025-09-08T08:16:33,594 Fetching project page and analyzing links: https://www.piwheels.org/simple/khmer/ 2025-09-08T08:16:33,594 Getting page https://www.piwheels.org/simple/khmer/ 2025-09-08T08:16:33,595 Found index url https://www.piwheels.org/simple/ 2025-09-08T08:16:33,687 Fetched page https://www.piwheels.org/simple/khmer/ as text/html 2025-09-08T08:16:33,688 Skipping link: not a file: https://www.piwheels.org/simple/khmer/ 2025-09-08T08:16:33,688 Skipping link: not a file: https://pypi.org/simple/khmer/ 2025-09-08T08:16:33,716 Given no hashes to check 1 links for project 'khmer': discarding no candidates 2025-09-08T08:16:33,717 Collecting khmer==2.1 2025-09-08T08:16:33,719 Created temporary directory: /tmp/pip-unpack-rw61qafp 2025-09-08T08:16:33,860 Downloading khmer-2.1.tar.gz (8.5 MB) 2025-09-08T08:16:35,937 Added khmer==2.1 from https://files.pythonhosted.org/packages/3e/e5/b3190cb9def69d665b42cd91ea27712f1d7de643f4b9c66ef2e5f1ab29c6/khmer-2.1.tar.gz to build tracker '/tmp/pip-build-tracker-xukauc4u' 2025-09-08T08:16:35,938 Running setup.py (path:/tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/setup.py) egg_info for package khmer 2025-09-08T08:16:35,939 Created temporary directory: /tmp/pip-pip-egg-info-muv5rjdk 2025-09-08T08:16:35,939 Preparing metadata (setup.py): started 2025-09-08T08:16:35,940 Running command python setup.py egg_info 2025-09-08T08:16:36,659 /tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/versioneer.py:564: SyntaxWarning: invalid escape sequence '\s' 2025-09-08T08:16:36,659 mo = re.search(r'=\s*"(.*)"', line) 2025-09-08T08:16:36,699 /tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/ez_setup.py:126: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81. 2025-09-08T08:16:36,699 import pkg_resources 2025-09-08T08:16:37,320 Traceback (most recent call last): 2025-09-08T08:16:37,322 File "", line 2, in 2025-09-08T08:16:37,323 exec(compile(''' 2025-09-08T08:16:37,323 ~~~~^^^^^^^^^^^^ 2025-09-08T08:16:37,323 # This is -- a caller that pip uses to run setup.py 2025-09-08T08:16:37,323 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,323 ...<32 lines>... 2025-09-08T08:16:37,323 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T08:16:37,323 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,323 ''' % ('/tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/setup.py',), "", "exec")) 2025-09-08T08:16:37,324 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,324 File "", line 35, in 2025-09-08T08:16:37,324 File "/tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/setup.py", line 168, in 2025-09-08T08:16:37,324 "define_macros": [("VERSION", versioneer.get_version()), ], 2025-09-08T08:16:37,324 ~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T08:16:37,324 File "/tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/versioneer.py", line 1480, in get_version 2025-09-08T08:16:37,324 return get_versions()["version"] 2025-09-08T08:16:37,324 ~~~~~~~~~~~~^^ 2025-09-08T08:16:37,324 File "/tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/versioneer.py", line 1412, in get_versions 2025-09-08T08:16:37,325 cfg = get_config_from_root(root) 2025-09-08T08:16:37,325 File "/tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/versioneer.py", line 342, in get_config_from_root 2025-09-08T08:16:37,325 parser = configparser.SafeConfigParser() 2025-09-08T08:16:37,325 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,325 AttributeError: module 'configparser' has no attribute 'SafeConfigParser'. Did you mean: 'RawConfigParser'? 2025-09-08T08:16:37,439 ERROR: python setup.py egg_info exited with 1 2025-09-08T08:16:37,452 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T08:16:37,452 exec(compile('"'"''"'"''"'"' 2025-09-08T08:16:37,452 # This is -- a caller that pip uses to run setup.py 2025-09-08T08:16:37,452 # 2025-09-08T08:16:37,452 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T08:16:37,452 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T08:16:37,452 # - It provides a clear error message when setuptools is not installed. 2025-09-08T08:16:37,452 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T08:16:37,452 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T08:16:37,452 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T08:16:37,452 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T08:16:37,452 import os, sys, tokenize, traceback 2025-09-08T08:16:37,452 2025-09-08T08:16:37,452 try: 2025-09-08T08:16:37,452 import setuptools 2025-09-08T08:16:37,452 except ImportError: 2025-09-08T08:16:37,452 print( 2025-09-08T08:16:37,452 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T08:16:37,452 "the build environment with exception:", 2025-09-08T08:16:37,452 file=sys.stderr, 2025-09-08T08:16:37,452 ) 2025-09-08T08:16:37,452 traceback.print_exc() 2025-09-08T08:16:37,452 sys.exit(1) 2025-09-08T08:16:37,452 2025-09-08T08:16:37,452 __file__ = %r 2025-09-08T08:16:37,452 sys.argv[0] = __file__ 2025-09-08T08:16:37,452 2025-09-08T08:16:37,452 if os.path.exists(__file__): 2025-09-08T08:16:37,452 filename = __file__ 2025-09-08T08:16:37,452 with tokenize.open(__file__) as f: 2025-09-08T08:16:37,452 setup_py_code = f.read() 2025-09-08T08:16:37,452 else: 2025-09-08T08:16:37,452 filename = "" 2025-09-08T08:16:37,452 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T08:16:37,452 2025-09-08T08:16:37,452 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T08:16:37,452 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-muv5rjdk[/] 2025-09-08T08:16:37,452 [bold magenta]cwd[/]: /tmp/pip-wheel-hvcurikc/khmer_deefd3d4808a45d68e57d027c9994e1c/ 2025-09-08T08:16:37,452 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T08:16:37,453 ERROR: metadata generation failed 2025-09-08T08:16:37,459 Exception information: 2025-09-08T08:16:37,459 Traceback (most recent call last): 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T08:16:37,459 call_subprocess( 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~^ 2025-09-08T08:16:37,459 args, 2025-09-08T08:16:37,459 ^^^^^ 2025-09-08T08:16:37,459 ...<2 lines>... 2025-09-08T08:16:37,459 spinner=spinner, 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 ) 2025-09-08T08:16:37,459 ^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T08:16:37,459 raise error 2025-09-08T08:16:37,459 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T08:16:37,459 2025-09-08T08:16:37,459 The above exception was the direct cause of the following exception: 2025-09-08T08:16:37,459 2025-09-08T08:16:37,459 Traceback (most recent call last): 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T08:16:37,459 status = _inner_run() 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T08:16:37,459 return self.run(options, args) 2025-09-08T08:16:37,459 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T08:16:37,459 return func(self, options, args) 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T08:16:37,459 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T08:16:37,459 result = self._result = resolver.resolve( 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~^ 2025-09-08T08:16:37,459 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 ) 2025-09-08T08:16:37,459 ^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T08:16:37,459 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T08:16:37,459 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T08:16:37,459 if not criterion.candidates: 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T08:16:37,459 return bool(self._sequence) 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T08:16:37,459 self._bool = any(self) 2025-09-08T08:16:37,459 ~~~^^^^^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T08:16:37,459 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T08:16:37,459 ^^^^^^^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T08:16:37,459 candidate = func() 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T08:16:37,459 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T08:16:37,459 link, template, name, version 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 ) 2025-09-08T08:16:37,459 ^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T08:16:37,459 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~^ 2025-09-08T08:16:37,459 link, 2025-09-08T08:16:37,459 ^^^^^ 2025-09-08T08:16:37,459 ...<3 lines>... 2025-09-08T08:16:37,459 version=version, 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 ) 2025-09-08T08:16:37,459 ^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T08:16:37,459 super().__init__( 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~^ 2025-09-08T08:16:37,459 link=link, 2025-09-08T08:16:37,459 ^^^^^^^^^^ 2025-09-08T08:16:37,459 ...<4 lines>... 2025-09-08T08:16:37,459 version=version, 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 ) 2025-09-08T08:16:37,459 ^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T08:16:37,459 self.dist = self._prepare() 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T08:16:37,459 dist = self._prepare_distribution() 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T08:16:37,459 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T08:16:37,459 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T08:16:37,459 dist = _get_prepared_distribution( 2025-09-08T08:16:37,459 req, 2025-09-08T08:16:37,459 ...<3 lines>... 2025-09-08T08:16:37,459 self.check_build_deps, 2025-09-08T08:16:37,459 ) 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T08:16:37,459 abstract_dist.prepare_distribution_metadata( 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T08:16:37,459 finder, build_isolation, check_build_deps 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 ) 2025-09-08T08:16:37,459 ^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T08:16:37,459 self.req.prepare_metadata() 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T08:16:37,459 self.metadata_directory = generate_metadata_legacy( 2025-09-08T08:16:37,459 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T08:16:37,459 build_env=self.build_env, 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 ...<3 lines>... 2025-09-08T08:16:37,459 details=details, 2025-09-08T08:16:37,459 ^^^^^^^^^^^^^^^^ 2025-09-08T08:16:37,459 ) 2025-09-08T08:16:37,459 ^ 2025-09-08T08:16:37,459 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T08:16:37,459 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T08:16:37,459 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T08:16:37,479 Removed khmer==2.1 from https://files.pythonhosted.org/packages/3e/e5/b3190cb9def69d665b42cd91ea27712f1d7de643f4b9c66ef2e5f1ab29c6/khmer-2.1.tar.gz from build tracker '/tmp/pip-build-tracker-xukauc4u' 2025-09-08T08:16:37,479 Removed build tracker: '/tmp/pip-build-tracker-xukauc4u'