2025-09-08T09:00:06,347 Created temporary directory: /tmp/pip-build-tracker-if4rny6y 2025-09-08T09:00:06,348 Initialized build tracking at /tmp/pip-build-tracker-if4rny6y 2025-09-08T09:00:06,348 Created build tracker: /tmp/pip-build-tracker-if4rny6y 2025-09-08T09:00:06,348 Entered build tracker: /tmp/pip-build-tracker-if4rny6y 2025-09-08T09:00:06,349 Created temporary directory: /tmp/pip-wheel-9xxu2o9q 2025-09-08T09:00:06,352 Created temporary directory: /tmp/pip-ephem-wheel-cache-yblwee1z 2025-09-08T09:00:06,411 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T09:00:06,413 2 location(s) to search for versions of seqlib: 2025-09-08T09:00:06,413 * https://pypi.org/simple/seqlib/ 2025-09-08T09:00:06,413 * https://www.piwheels.org/simple/seqlib/ 2025-09-08T09:00:06,414 Fetching project page and analyzing links: https://pypi.org/simple/seqlib/ 2025-09-08T09:00:06,414 Getting page https://pypi.org/simple/seqlib/ 2025-09-08T09:00:06,415 Found index url https://pypi.org/simple/ 2025-09-08T09:00:06,486 Fetched page https://pypi.org/simple/seqlib/ as application/vnd.pypi.simple.v1+json 2025-09-08T09:00:06,488 Found link https://files.pythonhosted.org/packages/f4/6d/d435e3b52eac85931b422fb91c0072499fd6bf2407113b678a1fc7b45af3/seqlib-0.0.2.tar.gz (from https://pypi.org/simple/seqlib/), version: 0.0.2 2025-09-08T09:00:06,488 Found link https://files.pythonhosted.org/packages/92/c5/5e920fe60a3122bcf29e71c61e829f4282a80dd74be60fd0d0d41b199403/seqlib-0.0.3.tar.gz (from https://pypi.org/simple/seqlib/), version: 0.0.3 2025-09-08T09:00:06,488 Skipping link: No binaries permitted for seqlib: https://files.pythonhosted.org/packages/f0/04/ff9d870e2c374d0fa0b8127b0ab225c241fa6cbe28cb9cc58ad901fa0dd5/seqlib-0.0.5-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/seqlib/) 2025-09-08T09:00:06,489 Found link https://files.pythonhosted.org/packages/98/24/83eecf315d536649ef65bfa3f99cf3115674f5ab46217e6a8126256d96a2/seqlib-0.0.5.tar.gz (from https://pypi.org/simple/seqlib/), version: 0.0.5 2025-09-08T09:00:06,489 Skipping link: No binaries permitted for seqlib: https://files.pythonhosted.org/packages/07/06/4177555c0421661b1d3d8a6d60c25df7527a4653792f76f6077a217f9e2b/seqlib-0.0.6-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/seqlib/) 2025-09-08T09:00:06,489 Found link https://files.pythonhosted.org/packages/62/35/8b843ab21b0a4cd669088097615d2a4008d683137485825f925bb3cb753b/seqlib-0.0.6.tar.gz (from https://pypi.org/simple/seqlib/), version: 0.0.6 2025-09-08T09:00:06,489 Fetching project page and analyzing links: https://www.piwheels.org/simple/seqlib/ 2025-09-08T09:00:06,490 Getting page https://www.piwheels.org/simple/seqlib/ 2025-09-08T09:00:06,490 Found index url https://www.piwheels.org/simple/ 2025-09-08T09:00:06,578 Fetched page https://www.piwheels.org/simple/seqlib/ as text/html 2025-09-08T09:00:06,579 Skipping link: not a file: https://www.piwheels.org/simple/seqlib/ 2025-09-08T09:00:06,579 Skipping link: not a file: https://pypi.org/simple/seqlib/ 2025-09-08T09:00:06,604 Given no hashes to check 1 links for project 'seqlib': discarding no candidates 2025-09-08T09:00:06,605 Collecting seqlib==0.0.3 2025-09-08T09:00:06,606 Created temporary directory: /tmp/pip-unpack-is6_0jcp 2025-09-08T09:00:06,902 Downloading seqlib-0.0.3.tar.gz (1.8 MB) 2025-09-08T09:00:07,475 Added seqlib==0.0.3 from https://files.pythonhosted.org/packages/92/c5/5e920fe60a3122bcf29e71c61e829f4282a80dd74be60fd0d0d41b199403/seqlib-0.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-if4rny6y' 2025-09-08T09:00:07,476 Running setup.py (path:/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/setup.py) egg_info for package seqlib 2025-09-08T09:00:07,477 Created temporary directory: /tmp/pip-pip-egg-info-0xygzpr5 2025-09-08T09:00:07,477 Preparing metadata (setup.py): started 2025-09-08T09:00:07,478 Running command python setup.py egg_info 2025-09-08T09:00:08,834 running egg_info 2025-09-08T09:00:08,908 creating /tmp/pip-pip-egg-info-0xygzpr5/seqlib.egg-info 2025-09-08T09:00:08,908 writing /tmp/pip-pip-egg-info-0xygzpr5/seqlib.egg-info/PKG-INFO 2025-09-08T09:00:08,910 writing dependency_links to /tmp/pip-pip-egg-info-0xygzpr5/seqlib.egg-info/dependency_links.txt 2025-09-08T09:00:08,910 writing requirements to /tmp/pip-pip-egg-info-0xygzpr5/seqlib.egg-info/requires.txt 2025-09-08T09:00:08,911 writing top-level names to /tmp/pip-pip-egg-info-0xygzpr5/seqlib.egg-info/top_level.txt 2025-09-08T09:00:08,911 writing manifest file '/tmp/pip-pip-egg-info-0xygzpr5/seqlib.egg-info/SOURCES.txt' 2025-09-08T09:00:09,134 reading manifest file '/tmp/pip-pip-egg-info-0xygzpr5/seqlib.egg-info/SOURCES.txt' 2025-09-08T09:00:09,135 reading manifest template 'MANIFEST.in' 2025-09-08T09:00:09,172 writing manifest file '/tmp/pip-pip-egg-info-0xygzpr5/seqlib.egg-info/SOURCES.txt' 2025-09-08T09:00:09,285 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T09:00:09,290 Source in /tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73 has version 0.0.3, which satisfies requirement seqlib==0.0.3 from https://files.pythonhosted.org/packages/92/c5/5e920fe60a3122bcf29e71c61e829f4282a80dd74be60fd0d0d41b199403/seqlib-0.0.3.tar.gz 2025-09-08T09:00:09,290 Removed seqlib==0.0.3 from https://files.pythonhosted.org/packages/92/c5/5e920fe60a3122bcf29e71c61e829f4282a80dd74be60fd0d0d41b199403/seqlib-0.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-if4rny6y' 2025-09-08T09:00:09,293 Created temporary directory: /tmp/pip-unpack-ts04z44s 2025-09-08T09:00:09,294 Created temporary directory: /tmp/pip-unpack-4764jbvi 2025-09-08T09:00:09,294 Building wheels for collected packages: seqlib 2025-09-08T09:00:09,295 Created temporary directory: /tmp/pip-wheel-5g4som2p 2025-09-08T09:00:09,295 DEPRECATION: Building 'seqlib' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'seqlib'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T09:00:09,296 Building wheel for seqlib (setup.py): started 2025-09-08T09:00:09,297 Destination directory: /tmp/pip-wheel-5g4som2p 2025-09-08T09:00:09,297 Running command python setup.py bdist_wheel 2025-09-08T09:00:10,376 running bdist_wheel 2025-09-08T09:00:10,671 running build 2025-09-08T09:00:10,671 running build_py 2025-09-08T09:00:10,749 creating build/lib.linux-armv7l-cpython-313/seqlib 2025-09-08T09:00:10,749 copying src/seqlib/__init__.py -> build/lib.linux-armv7l-cpython-313/seqlib 2025-09-08T09:00:10,750 running build_ext 2025-09-08T09:00:10,757 creating tmp 2025-09-08T09:00:10,758 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c /tmp/tmp4c3cpjxp.cpp -o tmp/tmp4c3cpjxp.o -std=c++14 2025-09-08T09:00:10,818 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c /tmp/tmps_si_ltt.cpp -o tmp/tmps_si_ltt.o -fvisibility=hidden 2025-09-08T09:00:10,891 Running command: ./configure CFLAGS=-fPIC CXXFLAGS=-fPIC 2025-09-08T09:00:11,587 checking for a BSD-compatible install... /usr/bin/install -c 2025-09-08T09:00:11,603 checking whether build environment is sane... yes 2025-09-08T09:00:11,632 /tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/lib/SeqLib/missing: Unknown `--is-lightweight' option 2025-09-08T09:00:11,632 Try `/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/lib/SeqLib/missing --help' for more information 2025-09-08T09:00:11,636 configure: WARNING: 'missing' script is too old or missing 2025-09-08T09:00:11,643 checking for a thread-safe mkdir -p... /usr/bin/mkdir -p 2025-09-08T09:00:11,646 checking for gawk... gawk 2025-09-08T09:00:11,902 checking whether make sets $(MAKE)... yes 2025-09-08T09:00:12,159 checking whether make supports nested variables... yes 2025-09-08T09:00:12,193 checking whether to enable maintainer-specific portions of Makefiles... no 2025-09-08T09:00:12,196 checking for g++... g++ 2025-09-08T09:00:12,534 checking whether the C++ compiler works... yes 2025-09-08T09:00:12,534 checking for C++ compiler default output file name... a.out 2025-09-08T09:00:12,751 checking for suffix of executables... 2025-09-08T09:00:13,003 checking whether we are cross compiling... no 2025-09-08T09:00:13,096 checking for suffix of object files... o 2025-09-08T09:00:13,179 checking whether we are using the GNU C++ compiler... yes 2025-09-08T09:00:13,265 checking whether g++ accepts -g... yes 2025-09-08T09:00:13,281 checking for style of include used by make... GNU 2025-09-08T09:00:13,439 checking dependency style of g++... gcc3 2025-09-08T09:00:13,442 checking for gcc... gcc 2025-09-08T09:00:13,625 checking whether we are using the GNU C compiler... yes 2025-09-08T09:00:13,705 checking whether gcc accepts -g... yes 2025-09-08T09:00:13,816 checking for gcc option to accept ISO C89... none needed 2025-09-08T09:00:13,955 checking whether gcc understands -c and -o together... yes 2025-09-08T09:00:14,106 checking dependency style of gcc... gcc3 2025-09-08T09:00:14,108 checking for ranlib... ranlib 2025-09-08T09:00:14,246 checking how to run the C++ preprocessor... g++ -E 2025-09-08T09:00:14,388 checking for grep that handles long lines and -e... /usr/bin/grep 2025-09-08T09:00:14,396 checking for egrep... /usr/bin/grep -E 2025-09-08T09:00:14,962 checking for ANSI C header files... yes 2025-09-08T09:00:15,110 checking for sys/types.h... yes 2025-09-08T09:00:15,289 checking for sys/stat.h... yes 2025-09-08T09:00:15,466 checking for stdlib.h... yes 2025-09-08T09:00:15,652 checking for string.h... yes 2025-09-08T09:00:15,842 checking for memory.h... yes 2025-09-08T09:00:16,036 checking for strings.h... yes 2025-09-08T09:00:16,228 checking for inttypes.h... yes 2025-09-08T09:00:16,422 checking for stdint.h... yes 2025-09-08T09:00:16,630 checking for unistd.h... yes 2025-09-08T09:00:16,832 checking zlib.h usability... yes 2025-09-08T09:00:16,918 checking zlib.h presence... yes 2025-09-08T09:00:16,918 checking for zlib.h... yes 2025-09-08T09:00:17,439 checking for library containing gzopen... -lz 2025-09-08T09:00:17,690 checking for library containing clock_gettime... none required 2025-09-08T09:00:17,770 checking that generated files are newer than configure... done 2025-09-08T09:00:17,771 configure: creating ./config.status 2025-09-08T09:00:18,171 config.status: creating Makefile 2025-09-08T09:00:18,228 config.status: creating src/Makefile 2025-09-08T09:00:18,305 config.status: creating src/seqtools/Makefile 2025-09-08T09:00:18,381 config.status: creating config.h 2025-09-08T09:00:18,426 config.status: executing depfiles commands 2025-09-08T09:00:18,821 Running command: make 2025-09-08T09:00:18,851 make all-recursive 2025-09-08T09:00:18,870 make[1]: Entering directory '/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/lib/SeqLib' 2025-09-08T09:00:18,894 Making all in bwa 2025-09-08T09:00:18,906 make[2]: Entering directory '/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/lib/SeqLib/bwa' 2025-09-08T09:00:18,916 gcc -c -g -Wall -Wno-unused-function -O2 -fPIC -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS utils.c -o utils.o 2025-09-08T09:00:20,727 gcc -c -g -Wall -Wno-unused-function -O2 -fPIC -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kthread.c -o kthread.o 2025-09-08T09:00:21,045 gcc -c -g -Wall -Wno-unused-function -O2 -fPIC -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS ksw.c -o ksw.o 2025-09-08T09:00:21,120 ksw.c:29:10: fatal error: emmintrin.h: No such file or directory 2025-09-08T09:00:21,120 29 | #include 2025-09-08T09:00:21,120 | ^~~~~~~~~~~~~ 2025-09-08T09:00:21,120 compilation terminated. 2025-09-08T09:00:21,122 make[2]: *** [Makefile:26: ksw.o] Error 1 2025-09-08T09:00:21,122 make[2]: Leaving directory '/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/lib/SeqLib/bwa' 2025-09-08T09:00:21,123 make[1]: *** [Makefile:358: all-recursive] Error 1 2025-09-08T09:00:21,124 make[1]: Leaving directory '/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/lib/SeqLib' 2025-09-08T09:00:21,124 make: *** [Makefile:299: all] Error 2 2025-09-08T09:00:21,137 Traceback (most recent call last): 2025-09-08T09:00:21,147 File "", line 2, in 2025-09-08T09:00:21,147 exec(compile(''' 2025-09-08T09:00:21,148 ~~~~^^^^^^^^^^^^ 2025-09-08T09:00:21,148 # This is -- a caller that pip uses to run setup.py 2025-09-08T09:00:21,148 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:00:21,148 ...<32 lines>... 2025-09-08T09:00:21,148 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T09:00:21,148 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:00:21,148 ''' % ('/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/setup.py',), "", "exec")) 2025-09-08T09:00:21,149 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:00:21,149 File "", line 35, in 2025-09-08T09:00:21,149 File "/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/setup.py", line 212, in 2025-09-08T09:00:21,149 setup( 2025-09-08T09:00:21,149 ~~~~~^ 2025-09-08T09:00:21,150 name='seqlib', 2025-09-08T09:00:21,150 ^^^^^^^^^^^^^^ 2025-09-08T09:00:21,150 ...<10 lines>... 2025-09-08T09:00:21,150 zip_safe=False, 2025-09-08T09:00:21,150 ^^^^^^^^^^^^^^^ 2025-09-08T09:00:21,150 ) 2025-09-08T09:00:21,150 ^ 2025-09-08T09:00:21,151 File "/usr/local/lib/python3.13/dist-packages/setuptools/__init__.py", line 115, in setup 2025-09-08T09:00:21,151 return distutils.core.setup(**attrs) 2025-09-08T09:00:21,151 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T09:00:21,151 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 186, in setup 2025-09-08T09:00:21,151 return run_commands(dist) 2025-09-08T09:00:21,151 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 202, in run_commands 2025-09-08T09:00:21,152 dist.run_commands() 2025-09-08T09:00:21,152 ~~~~~~~~~~~~~~~~~^^ 2025-09-08T09:00:21,152 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1002, in run_commands 2025-09-08T09:00:21,152 self.run_command(cmd) 2025-09-08T09:00:21,152 ~~~~~~~~~~~~~~~~^^^^^ 2025-09-08T09:00:21,152 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-08T09:00:21,152 super().run_command(command) 2025-09-08T09:00:21,153 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T09:00:21,153 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-08T09:00:21,153 cmd_obj.run() 2025-09-08T09:00:21,153 ~~~~~~~~~~~^^ 2025-09-08T09:00:21,153 File "/usr/local/lib/python3.13/dist-packages/setuptools/command/bdist_wheel.py", line 370, in run 2025-09-08T09:00:21,153 self.run_command("build") 2025-09-08T09:00:21,153 ~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T09:00:21,154 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command 2025-09-08T09:00:21,154 self.distribution.run_command(command) 2025-09-08T09:00:21,154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T09:00:21,154 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-08T09:00:21,154 super().run_command(command) 2025-09-08T09:00:21,154 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T09:00:21,155 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-08T09:00:21,155 cmd_obj.run() 2025-09-08T09:00:21,155 ~~~~~~~~~~~^^ 2025-09-08T09:00:21,155 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build.py", line 135, in run 2025-09-08T09:00:21,155 self.run_command(cmd_name) 2025-09-08T09:00:21,155 ~~~~~~~~~~~~~~~~^^^^^^^^^^ 2025-09-08T09:00:21,155 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command 2025-09-08T09:00:21,156 self.distribution.run_command(command) 2025-09-08T09:00:21,156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T09:00:21,156 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-08T09:00:21,156 super().run_command(command) 2025-09-08T09:00:21,156 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-08T09:00:21,156 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-08T09:00:21,157 cmd_obj.run() 2025-09-08T09:00:21,157 ~~~~~~~~~~~^^ 2025-09-08T09:00:21,157 File "/usr/local/lib/python3.13/dist-packages/setuptools/command/build_ext.py", line 96, in run 2025-09-08T09:00:21,157 _build_ext.run(self) 2025-09-08T09:00:21,157 ~~~~~~~~~~~~~~^^^^^^ 2025-09-08T09:00:21,157 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 368, in run 2025-09-08T09:00:21,157 self.build_extensions() 2025-09-08T09:00:21,158 ~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T09:00:21,158 File "/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/setup.py", line 152, in build_extensions 2025-09-08T09:00:21,158 build_ext.build_extensions(self) 2025-09-08T09:00:21,158 ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^ 2025-09-08T09:00:21,158 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 484, in build_extensions 2025-09-08T09:00:21,158 self._build_extensions_serial() 2025-09-08T09:00:21,159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T09:00:21,159 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 510, in _build_extensions_serial 2025-09-08T09:00:21,159 self.build_extension(ext) 2025-09-08T09:00:21,159 ~~~~~~~~~~~~~~~~~~~~^^^^^ 2025-09-08T09:00:21,159 File "/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/setup.py", line 157, in build_extension 2025-09-08T09:00:21,159 compile_seqlib() 2025-09-08T09:00:21,160 ~~~~~~~~~~~~~~^^ 2025-09-08T09:00:21,160 File "/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/setup.py", line 74, in compile_seqlib 2025-09-08T09:00:21,160 check_call("make") 2025-09-08T09:00:21,160 ~~~~~~~~~~^^^^^^^^ 2025-09-08T09:00:21,160 File "/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/setup.py", line 26, in check_call 2025-09-08T09:00:21,160 subprocess.check_call(command, shell=True) 2025-09-08T09:00:21,160 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:00:21,161 File "/usr/lib/python3.13/subprocess.py", line 419, in check_call 2025-09-08T09:00:21,161 raise CalledProcessError(retcode, cmd) 2025-09-08T09:00:21,161 subprocess.CalledProcessError: Command 'make' returned non-zero exit status 2. 2025-09-08T09:00:21,266 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T09:00:21,278 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T09:00:21,278 exec(compile('"'"''"'"''"'"' 2025-09-08T09:00:21,278 # This is -- a caller that pip uses to run setup.py 2025-09-08T09:00:21,278 # 2025-09-08T09:00:21,278 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T09:00:21,278 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T09:00:21,278 # - It provides a clear error message when setuptools is not installed. 2025-09-08T09:00:21,278 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T09:00:21,278 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T09:00:21,278 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T09:00:21,278 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T09:00:21,278 import os, sys, tokenize, traceback 2025-09-08T09:00:21,278 2025-09-08T09:00:21,278 try: 2025-09-08T09:00:21,278 import setuptools 2025-09-08T09:00:21,278 except ImportError: 2025-09-08T09:00:21,278 print( 2025-09-08T09:00:21,278 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T09:00:21,278 "the build environment with exception:", 2025-09-08T09:00:21,278 file=sys.stderr, 2025-09-08T09:00:21,278 ) 2025-09-08T09:00:21,278 traceback.print_exc() 2025-09-08T09:00:21,278 sys.exit(1) 2025-09-08T09:00:21,278 2025-09-08T09:00:21,278 __file__ = %r 2025-09-08T09:00:21,278 sys.argv[0] = __file__ 2025-09-08T09:00:21,278 2025-09-08T09:00:21,278 if os.path.exists(__file__): 2025-09-08T09:00:21,278 filename = __file__ 2025-09-08T09:00:21,278 with tokenize.open(__file__) as f: 2025-09-08T09:00:21,278 setup_py_code = f.read() 2025-09-08T09:00:21,278 else: 2025-09-08T09:00:21,278 filename = "" 2025-09-08T09:00:21,278 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T09:00:21,278 2025-09-08T09:00:21,278 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T09:00:21,278 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-5g4som2p[/] 2025-09-08T09:00:21,278 [bold magenta]cwd[/]: /tmp/pip-wheel-9xxu2o9q/seqlib_226c2931a6a241a49e4386dc086fff73/ 2025-09-08T09:00:21,278 Building wheel for seqlib (setup.py): finished with status 'error' 2025-09-08T09:00:21,279 ERROR: Failed building wheel for seqlib 2025-09-08T09:00:21,279 Running setup.py clean for seqlib 2025-09-08T09:00:21,280 Running command python setup.py clean 2025-09-08T09:00:22,433 running clean 2025-09-08T09:00:22,579 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:00:22,580 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T09:00:22,580 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T09:00:22,580 removing 'build' 2025-09-08T09:00:22,691 Failed to build seqlib 2025-09-08T09:00:22,692 ERROR: Failed to build one or more wheels 2025-09-08T09:00:22,693 Exception information: 2025-09-08T09:00:22,693 Traceback (most recent call last): 2025-09-08T09:00:22,693 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T09:00:22,693 status = _inner_run() 2025-09-08T09:00:22,693 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T09:00:22,693 return self.run(options, args) 2025-09-08T09:00:22,693 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T09:00:22,693 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T09:00:22,693 return func(self, options, args) 2025-09-08T09:00:22,693 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T09:00:22,693 raise CommandError("Failed to build one or more wheels") 2025-09-08T09:00:22,693 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T09:00:22,697 Removed build tracker: '/tmp/pip-build-tracker-if4rny6y'