2025-09-08T09:13:40,128 Created temporary directory: /tmp/pip-build-tracker-4fhghucz 2025-09-08T09:13:40,128 Initialized build tracking at /tmp/pip-build-tracker-4fhghucz 2025-09-08T09:13:40,128 Created build tracker: /tmp/pip-build-tracker-4fhghucz 2025-09-08T09:13:40,129 Entered build tracker: /tmp/pip-build-tracker-4fhghucz 2025-09-08T09:13:40,129 Created temporary directory: /tmp/pip-wheel-tl3tecnp 2025-09-08T09:13:40,132 Created temporary directory: /tmp/pip-ephem-wheel-cache-b_1_s0q5 2025-09-08T09:13:40,191 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T09:13:40,193 2 location(s) to search for versions of pydensecrf: 2025-09-08T09:13:40,193 * https://pypi.org/simple/pydensecrf/ 2025-09-08T09:13:40,193 * https://www.piwheels.org/simple/pydensecrf/ 2025-09-08T09:13:40,193 Fetching project page and analyzing links: https://pypi.org/simple/pydensecrf/ 2025-09-08T09:13:40,194 Getting page https://pypi.org/simple/pydensecrf/ 2025-09-08T09:13:40,195 Found index url https://pypi.org/simple/ 2025-09-08T09:13:40,340 Fetched page https://pypi.org/simple/pydensecrf/ as application/vnd.pypi.simple.v1+json 2025-09-08T09:13:40,342 Found link https://files.pythonhosted.org/packages/87/40/8bca500342914f83d35da61fd7be0c47955156bee87683a6aa1d0e8e040a/pydensecrf-1.0rc1.tar.gz (from https://pypi.org/simple/pydensecrf/), version: 1.0rc1 2025-09-08T09:13:40,342 Found link https://files.pythonhosted.org/packages/dd/11/7a79e817078323893f8071bb3fda1f45e34e443ec4a0790f8542158bbced/pydensecrf-1.0rc2.tar.gz (from https://pypi.org/simple/pydensecrf/), version: 1.0rc2 2025-09-08T09:13:40,343 Found link https://files.pythonhosted.org/packages/31/5a/1c2ab48e8019d282c128bc5c621332267bb954d32eecdda3ba57306b1551/pydensecrf-1.0rc3.tar.gz (from https://pypi.org/simple/pydensecrf/), version: 1.0rc3 2025-09-08T09:13:40,344 Fetching project page and analyzing links: https://www.piwheels.org/simple/pydensecrf/ 2025-09-08T09:13:40,344 Getting page https://www.piwheels.org/simple/pydensecrf/ 2025-09-08T09:13:40,346 Found index url https://www.piwheels.org/simple/ 2025-09-08T09:13:40,474 Fetched page https://www.piwheels.org/simple/pydensecrf/ as text/html 2025-09-08T09:13:40,480 Skipping link: No binaries permitted for pydensecrf: https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc3-cp34-cp34m-linux_armv6l.whl#sha256=10b3c73f1525f811209ecccc1f6c4c428bf493ddacc88091c8c2f97c5c1a52a4 (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,481 Skipping link: No binaries permitted for pydensecrf: https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc3-cp34-cp34m-linux_armv7l.whl#sha256=10b3c73f1525f811209ecccc1f6c4c428bf493ddacc88091c8c2f97c5c1a52a4 (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,481 Skipping link: No binaries permitted for pydensecrf: 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https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc2-cp34-cp34m-linux_armv7l.whl#sha256=72376de0d7e5c4f4d20e10701a5c6baff63266ad7b69da29dad270263fe92563 (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,482 Skipping link: No binaries permitted for pydensecrf: https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc2-cp35-cp35m-linux_armv7l.whl#sha256=9c5ac6c66ed3d66607fa12832a19ce4366c0826d3030e1cd84825d9eb80bedae (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,483 Skipping link: No binaries permitted for pydensecrf: https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc2-cp35-cp35m-linux_armv6l.whl#sha256=9c5ac6c66ed3d66607fa12832a19ce4366c0826d3030e1cd84825d9eb80bedae (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,483 Skipping link: No binaries permitted for pydensecrf: https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc1-cp35-cp35m-linux_armv6l.whl#sha256=ed50ded72e9ee0d18aa6c0a8b83d40251834554a543313f84e90041cdc18b9bd (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,483 Skipping link: No binaries permitted for pydensecrf: https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc1-cp35-cp35m-linux_armv7l.whl#sha256=ed50ded72e9ee0d18aa6c0a8b83d40251834554a543313f84e90041cdc18b9bd (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,484 Skipping link: No binaries permitted for pydensecrf: https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc1-cp34-cp34m-linux_armv7l.whl#sha256=243d9cd5d31c6c6b3f9be94fe3483f569f55cadc574b85a5f3850b0cc720a035 (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,484 Skipping link: No binaries permitted for pydensecrf: https://archive1.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc1-cp34-cp34m-linux_armv6l.whl#sha256=243d9cd5d31c6c6b3f9be94fe3483f569f55cadc574b85a5f3850b0cc720a035 (from https://www.piwheels.org/simple/pydensecrf/) 2025-09-08T09:13:40,484 Skipping link: not a file: https://www.piwheels.org/simple/pydensecrf/ 2025-09-08T09:13:40,485 Skipping link: not a file: https://pypi.org/simple/pydensecrf/ 2025-09-08T09:13:40,512 Given no hashes to check 1 links for project 'pydensecrf': discarding no candidates 2025-09-08T09:13:40,513 Collecting pydensecrf==1.0rc1 2025-09-08T09:13:40,515 Created temporary directory: /tmp/pip-unpack-2_hej6gj 2025-09-08T09:13:40,656 Downloading pydensecrf-1.0rc1.tar.gz (1.0 MB) 2025-09-08T09:13:41,072 Added pydensecrf==1.0rc1 from https://files.pythonhosted.org/packages/87/40/8bca500342914f83d35da61fd7be0c47955156bee87683a6aa1d0e8e040a/pydensecrf-1.0rc1.tar.gz to build tracker '/tmp/pip-build-tracker-4fhghucz' 2025-09-08T09:13:41,073 Running setup.py (path:/tmp/pip-wheel-tl3tecnp/pydensecrf_95adce033e86432fa48c92a48d887f2f/setup.py) egg_info for package pydensecrf 2025-09-08T09:13:41,073 Created temporary directory: /tmp/pip-pip-egg-info-3xh8bc_f 2025-09-08T09:13:41,073 Preparing metadata (setup.py): started 2025-09-08T09:13:41,074 Running command python setup.py egg_info 2025-09-08T09:13:43,011 Error compiling Cython file: 2025-09-08T09:13:43,011 ------------------------------------------------------------ 2025-09-08T09:13:43,011 ... 2025-09-08T09:13:43,012 from eigen cimport * 2025-09-08T09:13:43,012 ^ 2025-09-08T09:13:43,012 ------------------------------------------------------------ 2025-09-08T09:13:43,012 pydensecrf/densecrf.pxd:1:0: 'eigen.pxd' not found 2025-09-08T09:13:43,012 Error compiling Cython file: 2025-09-08T09:13:43,013 ------------------------------------------------------------ 2025-09-08T09:13:43,013 ... 2025-09-08T09:13:43,013 cdef cppclass PottsCompatibility(LabelCompatibility): 2025-09-08T09:13:43,013 PottsCompatibility(float) except + 2025-09-08T09:13:43,013 cdef cppclass DiagonalCompatibility(LabelCompatibility): 2025-09-08T09:13:43,013 DiagonalCompatibility(const c_VectorXf&) except + 2025-09-08T09:13:43,013 ^ 2025-09-08T09:13:43,014 ------------------------------------------------------------ 2025-09-08T09:13:43,014 pydensecrf/densecrf.pxd:12:36: 'c_VectorXf' is not a type identifier 2025-09-08T09:13:43,014 Error compiling Cython file: 2025-09-08T09:13:43,014 ------------------------------------------------------------ 2025-09-08T09:13:43,014 ... 2025-09-08T09:13:43,014 cdef cppclass DiagonalCompatibility(LabelCompatibility): 2025-09-08T09:13:43,014 DiagonalCompatibility(const c_VectorXf&) except + 2025-09-08T09:13:43,015 cdef cppclass MatrixCompatibility(LabelCompatibility): 2025-09-08T09:13:43,015 MatrixCompatibility(const c_MatrixXf&) except + 2025-09-08T09:13:43,015 ^ 2025-09-08T09:13:43,015 ------------------------------------------------------------ 2025-09-08T09:13:43,015 pydensecrf/densecrf.pxd:15:34: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,015 Error compiling Cython file: 2025-09-08T09:13:43,015 ------------------------------------------------------------ 2025-09-08T09:13:43,016 ... 2025-09-08T09:13:43,016 cdef extern from "densecrf/include/unary.h": 2025-09-08T09:13:43,016 cdef cppclass UnaryEnergy: 2025-09-08T09:13:43,016 pass 2025-09-08T09:13:43,016 cdef cppclass ConstUnaryEnergy(UnaryEnergy): 2025-09-08T09:13:43,016 ConstUnaryEnergy(const c_MatrixXf& unary) except + 2025-09-08T09:13:43,016 ^ 2025-09-08T09:13:43,016 ------------------------------------------------------------ 2025-09-08T09:13:43,016 pydensecrf/densecrf.pxd:23:31: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,017 Error compiling Cython file: 2025-09-08T09:13:43,017 ------------------------------------------------------------ 2025-09-08T09:13:43,017 ... 2025-09-08T09:13:43,017 cdef cppclass ConstUnaryEnergy(UnaryEnergy): 2025-09-08T09:13:43,017 ConstUnaryEnergy(const c_MatrixXf& unary) except + 2025-09-08T09:13:43,017 cdef cppclass LogisticUnaryEnergy(UnaryEnergy): 2025-09-08T09:13:43,017 LogisticUnaryEnergy(const c_MatrixXf& L, const c_MatrixXf& feature) except + 2025-09-08T09:13:43,018 ^ 2025-09-08T09:13:43,018 ------------------------------------------------------------ 2025-09-08T09:13:43,018 pydensecrf/densecrf.pxd:26:34: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,018 Error compiling Cython file: 2025-09-08T09:13:43,018 ------------------------------------------------------------ 2025-09-08T09:13:43,018 ... 2025-09-08T09:13:43,018 cdef cppclass ConstUnaryEnergy(UnaryEnergy): 2025-09-08T09:13:43,018 ConstUnaryEnergy(const c_MatrixXf& unary) except + 2025-09-08T09:13:43,019 cdef cppclass LogisticUnaryEnergy(UnaryEnergy): 2025-09-08T09:13:43,019 LogisticUnaryEnergy(const c_MatrixXf& L, const c_MatrixXf& feature) except + 2025-09-08T09:13:43,019 ^ 2025-09-08T09:13:43,019 ------------------------------------------------------------ 2025-09-08T09:13:43,019 pydensecrf/densecrf.pxd:26:55: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,019 Error compiling Cython file: 2025-09-08T09:13:43,019 ------------------------------------------------------------ 2025-09-08T09:13:43,020 ... 2025-09-08T09:13:43,020 c_DenseCRF(int N, int M) except + 2025-09-08T09:13:43,020 # Setup methods. 2025-09-08T09:13:43,020 # TODO 2025-09-08T09:13:43,020 #void addPairwiseEnergy(PairwisePotential *potential) 2025-09-08T09:13:43,020 void addPairwiseEnergy(const c_MatrixXf &features, LabelCompatibility*, KernelType, NormalizationType) 2025-09-08T09:13:43,020 ^ 2025-09-08T09:13:43,020 ------------------------------------------------------------ 2025-09-08T09:13:43,020 pydensecrf/densecrf.pxd:54:37: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,021 Error compiling Cython file: 2025-09-08T09:13:43,021 ------------------------------------------------------------ 2025-09-08T09:13:43,021 ... 2025-09-08T09:13:43,021 # Setup methods. 2025-09-08T09:13:43,021 # TODO 2025-09-08T09:13:43,021 #void addPairwiseEnergy(PairwisePotential *potential) 2025-09-08T09:13:43,021 void addPairwiseEnergy(const c_MatrixXf &features, LabelCompatibility*, KernelType, NormalizationType) 2025-09-08T09:13:43,021 void setUnaryEnergy(UnaryEnergy *unary) 2025-09-08T09:13:43,021 void setUnaryEnergy(const c_MatrixXf &unary) 2025-09-08T09:13:43,022 ^ 2025-09-08T09:13:43,022 ------------------------------------------------------------ 2025-09-08T09:13:43,022 pydensecrf/densecrf.pxd:56:34: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,022 Error compiling Cython file: 2025-09-08T09:13:43,022 ------------------------------------------------------------ 2025-09-08T09:13:43,022 ... 2025-09-08T09:13:43,022 # TODO 2025-09-08T09:13:43,022 #void addPairwiseEnergy(PairwisePotential *potential) 2025-09-08T09:13:43,023 void addPairwiseEnergy(const c_MatrixXf &features, LabelCompatibility*, KernelType, NormalizationType) 2025-09-08T09:13:43,023 void setUnaryEnergy(UnaryEnergy *unary) 2025-09-08T09:13:43,023 void setUnaryEnergy(const c_MatrixXf &unary) 2025-09-08T09:13:43,023 void setUnaryEnergy(const c_MatrixXf &L, const c_MatrixXf &feature) 2025-09-08T09:13:43,023 ^ 2025-09-08T09:13:43,023 ------------------------------------------------------------ 2025-09-08T09:13:43,023 pydensecrf/densecrf.pxd:57:34: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,023 Error compiling Cython file: 2025-09-08T09:13:43,023 ------------------------------------------------------------ 2025-09-08T09:13:43,024 ... 2025-09-08T09:13:43,024 # TODO 2025-09-08T09:13:43,024 #void addPairwiseEnergy(PairwisePotential *potential) 2025-09-08T09:13:43,024 void addPairwiseEnergy(const c_MatrixXf &features, LabelCompatibility*, KernelType, NormalizationType) 2025-09-08T09:13:43,024 void setUnaryEnergy(UnaryEnergy *unary) 2025-09-08T09:13:43,024 void setUnaryEnergy(const c_MatrixXf &unary) 2025-09-08T09:13:43,024 void setUnaryEnergy(const c_MatrixXf &L, const c_MatrixXf &feature) 2025-09-08T09:13:43,024 ^ 2025-09-08T09:13:43,024 ------------------------------------------------------------ 2025-09-08T09:13:43,025 pydensecrf/densecrf.pxd:57:55: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,025 Error compiling Cython file: 2025-09-08T09:13:43,025 ------------------------------------------------------------ 2025-09-08T09:13:43,025 ... 2025-09-08T09:13:43,025 void setUnaryEnergy(UnaryEnergy *unary) 2025-09-08T09:13:43,025 void setUnaryEnergy(const c_MatrixXf &unary) 2025-09-08T09:13:43,025 void setUnaryEnergy(const c_MatrixXf &L, const c_MatrixXf &feature) 2025-09-08T09:13:43,025 # Inference methods. 2025-09-08T09:13:43,025 c_MatrixXf inference(int n_iterations) 2025-09-08T09:13:43,026 ^ 2025-09-08T09:13:43,026 ------------------------------------------------------------ 2025-09-08T09:13:43,026 pydensecrf/densecrf.pxd:60:8: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,026 Error compiling Cython file: 2025-09-08T09:13:43,026 ------------------------------------------------------------ 2025-09-08T09:13:43,026 ... 2025-09-08T09:13:43,026 c_MatrixXf inference(int n_iterations) 2025-09-08T09:13:43,026 # TODO: Not enabled because it would require wrapping VectorXs (note the `s`) 2025-09-08T09:13:43,026 #c_VectorXs map(int n_iterations) 2025-09-08T09:13:43,027 # Step-by-step inference methods. 2025-09-08T09:13:43,027 c_MatrixXf startInference() const 2025-09-08T09:13:43,027 ^ 2025-09-08T09:13:43,027 ------------------------------------------------------------ 2025-09-08T09:13:43,027 pydensecrf/densecrf.pxd:65:8: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,027 Error compiling Cython file: 2025-09-08T09:13:43,027 ------------------------------------------------------------ 2025-09-08T09:13:43,027 ... 2025-09-08T09:13:43,028 # TODO: Not enabled because it would require wrapping VectorXs (note the `s`) 2025-09-08T09:13:43,028 #c_VectorXs map(int n_iterations) 2025-09-08T09:13:43,028 # Step-by-step inference methods. 2025-09-08T09:13:43,028 c_MatrixXf startInference() const 2025-09-08T09:13:43,028 void stepInference(c_MatrixXf &Q, c_MatrixXf &tmp1, c_MatrixXf &tmp2) const 2025-09-08T09:13:43,028 ^ 2025-09-08T09:13:43,028 ------------------------------------------------------------ 2025-09-08T09:13:43,028 pydensecrf/densecrf.pxd:66:27: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,029 Error compiling Cython file: 2025-09-08T09:13:43,029 ------------------------------------------------------------ 2025-09-08T09:13:43,029 ... 2025-09-08T09:13:43,029 # TODO: Not enabled because it would require wrapping VectorXs (note the `s`) 2025-09-08T09:13:43,029 #c_VectorXs map(int n_iterations) 2025-09-08T09:13:43,029 # Step-by-step inference methods. 2025-09-08T09:13:43,029 c_MatrixXf startInference() const 2025-09-08T09:13:43,029 void stepInference(c_MatrixXf &Q, c_MatrixXf &tmp1, c_MatrixXf &tmp2) const 2025-09-08T09:13:43,029 ^ 2025-09-08T09:13:43,030 ------------------------------------------------------------ 2025-09-08T09:13:43,030 pydensecrf/densecrf.pxd:66:42: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,030 Error compiling Cython file: 2025-09-08T09:13:43,030 ------------------------------------------------------------ 2025-09-08T09:13:43,030 ... 2025-09-08T09:13:43,030 # TODO: Not enabled because it would require wrapping VectorXs (note the `s`) 2025-09-08T09:13:43,030 #c_VectorXs map(int n_iterations) 2025-09-08T09:13:43,030 # Step-by-step inference methods. 2025-09-08T09:13:43,031 c_MatrixXf startInference() const 2025-09-08T09:13:43,031 void stepInference(c_MatrixXf &Q, c_MatrixXf &tmp1, c_MatrixXf &tmp2) const 2025-09-08T09:13:43,031 ^ 2025-09-08T09:13:43,031 ------------------------------------------------------------ 2025-09-08T09:13:43,031 pydensecrf/densecrf.pxd:66:60: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,031 Error compiling Cython file: 2025-09-08T09:13:43,031 ------------------------------------------------------------ 2025-09-08T09:13:43,031 ... 2025-09-08T09:13:43,032 # Step-by-step inference methods. 2025-09-08T09:13:43,032 c_MatrixXf startInference() const 2025-09-08T09:13:43,032 void stepInference(c_MatrixXf &Q, c_MatrixXf &tmp1, c_MatrixXf &tmp2) const 2025-09-08T09:13:43,032 #double gradient( int n_iterations, const ObjectiveFunction & objective, c_VectorXf * unary_grad, c_VectorXf * lbl_cmp_grad, c_VectorXf * kernel_grad=NULL ) const; 2025-09-08T09:13:43,032 double klDivergence(const c_MatrixXf &Q) const 2025-09-08T09:13:43,032 ^ 2025-09-08T09:13:43,032 ------------------------------------------------------------ 2025-09-08T09:13:43,032 pydensecrf/densecrf.pxd:69:34: 'c_MatrixXf' is not a type identifier 2025-09-08T09:13:43,055 warning: pydensecrf/densecrf.pyx:20:4: Unreachable code 2025-09-08T09:13:43,527 Error compiling Cython file: 2025-09-08T09:13:43,527 ------------------------------------------------------------ 2025-09-08T09:13:43,527 ... 2025-09-08T09:13:43,527 return eigen.MatrixXf().wrap(self._this.inference(niter)) 2025-09-08T09:13:43,527 def startInference(self): 2025-09-08T09:13:43,527 return eigen.MatrixXf().wrap(self._this.startInference()), eigen.MatrixXf(), eigen.MatrixXf() 2025-09-08T09:13:43,528 def stepInference(self, MatrixXf Q, MatrixXf tmp1, MatrixXf tmp2): 2025-09-08T09:13:43,528 ^ 2025-09-08T09:13:43,528 ------------------------------------------------------------ 2025-09-08T09:13:43,528 pydensecrf/densecrf.pyx:97:28: 'MatrixXf' is not a type identifier 2025-09-08T09:13:43,528 Error compiling Cython file: 2025-09-08T09:13:43,528 ------------------------------------------------------------ 2025-09-08T09:13:43,528 ... 2025-09-08T09:13:43,529 return eigen.MatrixXf().wrap(self._this.inference(niter)) 2025-09-08T09:13:43,529 def startInference(self): 2025-09-08T09:13:43,529 return eigen.MatrixXf().wrap(self._this.startInference()), eigen.MatrixXf(), eigen.MatrixXf() 2025-09-08T09:13:43,529 def stepInference(self, MatrixXf Q, MatrixXf tmp1, MatrixXf tmp2): 2025-09-08T09:13:43,529 ^ 2025-09-08T09:13:43,529 ------------------------------------------------------------ 2025-09-08T09:13:43,529 pydensecrf/densecrf.pyx:97:40: 'MatrixXf' is not a type identifier 2025-09-08T09:13:43,530 Error compiling Cython file: 2025-09-08T09:13:43,530 ------------------------------------------------------------ 2025-09-08T09:13:43,530 ... 2025-09-08T09:13:43,530 return eigen.MatrixXf().wrap(self._this.inference(niter)) 2025-09-08T09:13:43,530 def startInference(self): 2025-09-08T09:13:43,530 return eigen.MatrixXf().wrap(self._this.startInference()), eigen.MatrixXf(), eigen.MatrixXf() 2025-09-08T09:13:43,530 def stepInference(self, MatrixXf Q, MatrixXf tmp1, MatrixXf tmp2): 2025-09-08T09:13:43,530 ^ 2025-09-08T09:13:43,531 ------------------------------------------------------------ 2025-09-08T09:13:43,531 pydensecrf/densecrf.pyx:97:55: 'MatrixXf' is not a type identifier 2025-09-08T09:13:43,531 Error compiling Cython file: 2025-09-08T09:13:43,531 ------------------------------------------------------------ 2025-09-08T09:13:43,531 ... 2025-09-08T09:13:43,531 return eigen.MatrixXf().wrap(self._this.startInference()), eigen.MatrixXf(), eigen.MatrixXf() 2025-09-08T09:13:43,531 def stepInference(self, MatrixXf Q, MatrixXf tmp1, MatrixXf tmp2): 2025-09-08T09:13:43,531 self._this.stepInference(Q.m, tmp1.m, tmp2.m) 2025-09-08T09:13:43,532 def klDivergence(self, MatrixXf Q): 2025-09-08T09:13:43,532 ^ 2025-09-08T09:13:43,532 ------------------------------------------------------------ 2025-09-08T09:13:43,532 pydensecrf/densecrf.pyx:100:27: 'MatrixXf' is not a type identifier 2025-09-08T09:13:44,597 Traceback (most recent call last): 2025-09-08T09:13:44,599 File "", line 2, in 2025-09-08T09:13:44,600 exec(compile(''' 2025-09-08T09:13:44,600 ~~~~^^^^^^^^^^^^ 2025-09-08T09:13:44,600 # This is -- a caller that pip uses to run setup.py 2025-09-08T09:13:44,600 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:44,600 ...<32 lines>... 2025-09-08T09:13:44,600 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T09:13:44,600 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:44,600 ''' % ('/tmp/pip-wheel-tl3tecnp/pydensecrf_95adce033e86432fa48c92a48d887f2f/setup.py',), "", "exec")) 2025-09-08T09:13:44,600 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:44,601 File "", line 35, in 2025-09-08T09:13:44,601 File "/tmp/pip-wheel-tl3tecnp/pydensecrf_95adce033e86432fa48c92a48d887f2f/setup.py", line 13, in 2025-09-08T09:13:44,601 ext_modules = cythonize(['pydensecrf/eigen.pyx', 'pydensecrf/densecrf.pyx']) 2025-09-08T09:13:44,601 File "/usr/local/lib/python3.13/dist-packages/Cython/Build/Dependencies.py", line 1154, in cythonize 2025-09-08T09:13:44,601 cythonize_one(*args) 2025-09-08T09:13:44,601 ~~~~~~~~~~~~~^^^^^^^ 2025-09-08T09:13:44,601 File "/usr/local/lib/python3.13/dist-packages/Cython/Build/Dependencies.py", line 1298, in cythonize_one 2025-09-08T09:13:44,601 raise CompileError(None, pyx_file) 2025-09-08T09:13:44,601 Cython.Compiler.Errors.CompileError: pydensecrf/densecrf.pyx 2025-09-08T09:13:44,602 Compiling pydensecrf/eigen.pyx because it changed. 2025-09-08T09:13:44,602 Compiling pydensecrf/densecrf.pyx because it changed. 2025-09-08T09:13:44,602 [1/2] Cythonizing pydensecrf/densecrf.pyx 2025-09-08T09:13:45,027 ERROR: python setup.py egg_info exited with 1 2025-09-08T09:13:45,039 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T09:13:45,039 exec(compile('"'"''"'"''"'"' 2025-09-08T09:13:45,039 # This is -- a caller that pip uses to run setup.py 2025-09-08T09:13:45,039 # 2025-09-08T09:13:45,039 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T09:13:45,039 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T09:13:45,039 # - It provides a clear error message when setuptools is not installed. 2025-09-08T09:13:45,039 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T09:13:45,039 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T09:13:45,039 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T09:13:45,039 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T09:13:45,039 import os, sys, tokenize, traceback 2025-09-08T09:13:45,039 2025-09-08T09:13:45,039 try: 2025-09-08T09:13:45,039 import setuptools 2025-09-08T09:13:45,039 except ImportError: 2025-09-08T09:13:45,039 print( 2025-09-08T09:13:45,039 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T09:13:45,039 "the build environment with exception:", 2025-09-08T09:13:45,039 file=sys.stderr, 2025-09-08T09:13:45,039 ) 2025-09-08T09:13:45,039 traceback.print_exc() 2025-09-08T09:13:45,039 sys.exit(1) 2025-09-08T09:13:45,039 2025-09-08T09:13:45,039 __file__ = %r 2025-09-08T09:13:45,039 sys.argv[0] = __file__ 2025-09-08T09:13:45,039 2025-09-08T09:13:45,039 if os.path.exists(__file__): 2025-09-08T09:13:45,039 filename = __file__ 2025-09-08T09:13:45,039 with tokenize.open(__file__) as f: 2025-09-08T09:13:45,039 setup_py_code = f.read() 2025-09-08T09:13:45,039 else: 2025-09-08T09:13:45,039 filename = "" 2025-09-08T09:13:45,039 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T09:13:45,039 2025-09-08T09:13:45,039 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T09:13:45,039 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-tl3tecnp/pydensecrf_95adce033e86432fa48c92a48d887f2f/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-3xh8bc_f[/] 2025-09-08T09:13:45,039 [bold magenta]cwd[/]: /tmp/pip-wheel-tl3tecnp/pydensecrf_95adce033e86432fa48c92a48d887f2f/ 2025-09-08T09:13:45,040 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T09:13:45,041 ERROR: metadata generation failed 2025-09-08T09:13:45,047 Exception information: 2025-09-08T09:13:45,047 Traceback (most recent call last): 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T09:13:45,047 call_subprocess( 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~^ 2025-09-08T09:13:45,047 args, 2025-09-08T09:13:45,047 ^^^^^ 2025-09-08T09:13:45,047 ...<2 lines>... 2025-09-08T09:13:45,047 spinner=spinner, 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 ) 2025-09-08T09:13:45,047 ^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T09:13:45,047 raise error 2025-09-08T09:13:45,047 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T09:13:45,047 2025-09-08T09:13:45,047 The above exception was the direct cause of the following exception: 2025-09-08T09:13:45,047 2025-09-08T09:13:45,047 Traceback (most recent call last): 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T09:13:45,047 status = _inner_run() 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T09:13:45,047 return self.run(options, args) 2025-09-08T09:13:45,047 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T09:13:45,047 return func(self, options, args) 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T09:13:45,047 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T09:13:45,047 result = self._result = resolver.resolve( 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~^ 2025-09-08T09:13:45,047 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 ) 2025-09-08T09:13:45,047 ^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T09:13:45,047 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T09:13:45,047 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T09:13:45,047 if not criterion.candidates: 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T09:13:45,047 return bool(self._sequence) 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T09:13:45,047 self._bool = any(self) 2025-09-08T09:13:45,047 ~~~^^^^^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T09:13:45,047 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T09:13:45,047 ^^^^^^^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T09:13:45,047 candidate = func() 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T09:13:45,047 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T09:13:45,047 link, template, name, version 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 ) 2025-09-08T09:13:45,047 ^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T09:13:45,047 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~^ 2025-09-08T09:13:45,047 link, 2025-09-08T09:13:45,047 ^^^^^ 2025-09-08T09:13:45,047 ...<3 lines>... 2025-09-08T09:13:45,047 version=version, 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 ) 2025-09-08T09:13:45,047 ^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T09:13:45,047 super().__init__( 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~^ 2025-09-08T09:13:45,047 link=link, 2025-09-08T09:13:45,047 ^^^^^^^^^^ 2025-09-08T09:13:45,047 ...<4 lines>... 2025-09-08T09:13:45,047 version=version, 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 ) 2025-09-08T09:13:45,047 ^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T09:13:45,047 self.dist = self._prepare() 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T09:13:45,047 dist = self._prepare_distribution() 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T09:13:45,047 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T09:13:45,047 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T09:13:45,047 dist = _get_prepared_distribution( 2025-09-08T09:13:45,047 req, 2025-09-08T09:13:45,047 ...<3 lines>... 2025-09-08T09:13:45,047 self.check_build_deps, 2025-09-08T09:13:45,047 ) 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T09:13:45,047 abstract_dist.prepare_distribution_metadata( 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T09:13:45,047 finder, build_isolation, check_build_deps 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 ) 2025-09-08T09:13:45,047 ^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T09:13:45,047 self.req.prepare_metadata() 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T09:13:45,047 self.metadata_directory = generate_metadata_legacy( 2025-09-08T09:13:45,047 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T09:13:45,047 build_env=self.build_env, 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 ...<3 lines>... 2025-09-08T09:13:45,047 details=details, 2025-09-08T09:13:45,047 ^^^^^^^^^^^^^^^^ 2025-09-08T09:13:45,047 ) 2025-09-08T09:13:45,047 ^ 2025-09-08T09:13:45,047 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T09:13:45,047 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T09:13:45,047 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T09:13:45,069 Removed pydensecrf==1.0rc1 from https://files.pythonhosted.org/packages/87/40/8bca500342914f83d35da61fd7be0c47955156bee87683a6aa1d0e8e040a/pydensecrf-1.0rc1.tar.gz from build tracker '/tmp/pip-build-tracker-4fhghucz' 2025-09-08T09:13:45,069 Removed build tracker: '/tmp/pip-build-tracker-4fhghucz'