2025-09-08T09:30:09,951 Created temporary directory: /tmp/pip-build-tracker-kb7ut1_0 2025-09-08T09:30:09,951 Initialized build tracking at /tmp/pip-build-tracker-kb7ut1_0 2025-09-08T09:30:09,951 Created build tracker: /tmp/pip-build-tracker-kb7ut1_0 2025-09-08T09:30:09,951 Entered build tracker: /tmp/pip-build-tracker-kb7ut1_0 2025-09-08T09:30:09,952 Created temporary directory: /tmp/pip-wheel-ryro695m 2025-09-08T09:30:09,955 Created temporary directory: /tmp/pip-ephem-wheel-cache-6kt543ql 2025-09-08T09:30:10,014 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T09:30:10,016 2 location(s) to search for versions of hapflk: 2025-09-08T09:30:10,016 * https://pypi.org/simple/hapflk/ 2025-09-08T09:30:10,016 * https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:30:10,016 Fetching project page and analyzing links: https://pypi.org/simple/hapflk/ 2025-09-08T09:30:10,017 Getting page https://pypi.org/simple/hapflk/ 2025-09-08T09:30:10,018 Found index url https://pypi.org/simple/ 2025-09-08T09:30:10,087 Fetched page https://pypi.org/simple/hapflk/ as application/vnd.pypi.simple.v1+json 2025-09-08T09:30:10,089 Found link https://files.pythonhosted.org/packages/b2/ad/85999140cbc66853d701f214fd6548aab07dc46fe29c2d8632c332e97689/hapflk-1.3.2.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.2 2025-09-08T09:30:10,090 Found link https://files.pythonhosted.org/packages/ca/fa/51a8f51e01fbc13e8f4b36acbdb6d31188481f4c1ce440b8797ec769d910/hapflk-1.3.3.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.3 2025-09-08T09:30:10,090 Found link https://files.pythonhosted.org/packages/63/d9/33d91f8a3376ab13ffc0a102caa32a2332fccda2db96009f7cf317593e1b/hapflk-1.3.4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.4 2025-09-08T09:30:10,090 Found link https://files.pythonhosted.org/packages/65/21/a92bba282c49dcacbdb002ed60a7a9b2bddfb98f7eedc382a3d0c134abe7/hapflk-1.3.5.dev0.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev0 2025-09-08T09:30:10,090 Found link https://files.pythonhosted.org/packages/6b/81/cc8f04f774e8728b5167bc58ae12eb4fb2125b784a395fdfefb3e78f7733/hapflk-1.3.5.dev1.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev1 2025-09-08T09:30:10,090 Found link https://files.pythonhosted.org/packages/f8/34/1bd9c49ea13e6be4afec643acfe9f960ae6714fea4d5499a75988e81663e/hapflk-1.3.5.dev2.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev2 2025-09-08T09:30:10,091 Found link https://files.pythonhosted.org/packages/96/14/256f0eda9b570de3b48a7fcff1d062ab7694bd32e7f2ad7ef8bd483b926f/hapflk-1.3.5.dev3.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev3 2025-09-08T09:30:10,091 Found link https://files.pythonhosted.org/packages/aa/c6/c72917e6d4492061b47104c7922b0368c38be20b87bf3e0553d8824a9cfe/hapflk-1.3.5.dev4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev4 2025-09-08T09:30:10,091 Found link https://files.pythonhosted.org/packages/a4/96/4b534230ad9ea961235c5841bde1054bacbb574f88fe19324a776d4b0992/hapflk-1.3.5.dev5.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev5 2025-09-08T09:30:10,091 Found link https://files.pythonhosted.org/packages/5c/f9/f5bd0ea0712da4d11795fda5b40c44be0421a85d6b05f8e9687ce30b8089/hapflk-1.3.5.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5 2025-09-08T09:30:10,091 Found link https://files.pythonhosted.org/packages/51/c4/ed7b823aa136185d750d60f53268cfb6804dcc87183dbe216135e63aa583/hapflk-1.4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.4 2025-09-08T09:30:10,092 Found link https://files.pythonhosted.org/packages/c6/a6/ed1b0c03bdb79de6f288c5e982af3afcaae7a26cdd00ff75dd98bf81a13e/hapflk-2.0.dev0.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev0 2025-09-08T09:30:10,092 Found link https://files.pythonhosted.org/packages/30/60/1dab8e6a54e7ef2c19a62114527d5512da17a09a590d5551610b2fce8195/hapflk-2.0.dev1.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev1 2025-09-08T09:30:10,092 Found link https://files.pythonhosted.org/packages/89/5d/fa3af0a5d868d5154d1516696a317c13bcb686706143ec2052f789e17017/hapflk-2.0.dev2.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev2 2025-09-08T09:30:10,092 Skipping link: No binaries permitted for hapflk: https://files.pythonhosted.org/packages/17/3e/be1a90cc099e9ab4e2031be8539dad16495f9fc61f72424cee5dd0260f08/hapflk-2.1-py3-none-any.whl (from https://pypi.org/simple/hapflk/) (requires-python:>=3.8) 2025-09-08T09:30:10,093 Found link https://files.pythonhosted.org/packages/6c/ea/807cf8f36f1af15848db5264d8af4a260c081525943a932d69a81543ca8e/hapflk-2.1.tar.gz (from https://pypi.org/simple/hapflk/) (requires-python:>=3.8), version: 2.1 2025-09-08T09:30:10,093 Fetching project page and analyzing links: https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:30:10,094 Getting page https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:30:10,094 Found index url https://www.piwheels.org/simple/ 2025-09-08T09:30:10,189 Fetched page https://www.piwheels.org/simple/hapflk/ as text/html 2025-09-08T09:30:10,195 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-2.1-py3-none-any.whl#sha256=12ca832837ecb12292516fbb6ab0aff875d2be9a41f09362808a6973e3b3114e (from https://www.piwheels.org/simple/hapflk/) (requires-python:>=3.8) 2025-09-08T09:30:10,196 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp35-cp35m-linux_armv6l.whl#sha256=f7038eca9bba9d085b3b2ba6c6cba6778b3767a641d8c77b4a6770167d4d322d (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,196 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp35-cp35m-linux_armv7l.whl#sha256=f7038eca9bba9d085b3b2ba6c6cba6778b3767a641d8c77b4a6770167d4d322d (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,196 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp34-cp34m-linux_armv7l.whl#sha256=fb3798d9a4c7b3e2fb4b977a8d6dc3ae44b4cb0102ca67167d58182da2bdce0b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,196 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp35-cp35m-linux_armv6l.whl#sha256=73ecd00dcf029388178f31b3cbf3c04cbb264f752a6d05214bd6df8db316df6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,196 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp35-cp35m-linux_armv7l.whl#sha256=73ecd00dcf029388178f31b3cbf3c04cbb264f752a6d05214bd6df8db316df6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,196 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp34-cp34m-linux_armv7l.whl#sha256=5a64b9b9dae78e36eca456a2e9709b21d7a7bdb908a3d47e2b6529e1a5a64d1b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,196 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp34-cp34m-linux_armv7l.whl#sha256=fc973aad2b2ab1f031c8f17bd84b9707d283a7ce888fd944c7af2b0a925a4deb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,197 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp35-cp35m-linux_armv7l.whl#sha256=2801d5ffbdc9b9fcbf8e6cce77a1514b01ca28f562e550bfd093296db4ef9a95 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,197 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp35-cp35m-linux_armv6l.whl#sha256=2801d5ffbdc9b9fcbf8e6cce77a1514b01ca28f562e550bfd093296db4ef9a95 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,197 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp35-cp35m-linux_armv6l.whl#sha256=36fb4c6462ef30dda62684182251105eb2c822311065fd8ecd3b8a50f71ff244 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,197 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp35-cp35m-linux_armv7l.whl#sha256=36fb4c6462ef30dda62684182251105eb2c822311065fd8ecd3b8a50f71ff244 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,197 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp34-cp34m-linux_armv7l.whl#sha256=ba9a150f4c149df5b850e3dd31a6b7c442c50be76885355dc4a61611769ea367 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,197 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp34-cp34m-linux_armv7l.whl#sha256=12a3afe8bcb1936f5e30f374a25c6c3ad3f95ae5f59debcd89d3411d54899c86 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,197 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp35-cp35m-linux_armv7l.whl#sha256=e102a09db17e00ce4674077242b8abe77b140ccbc28084bc872a84f6a1f5dab0 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,198 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp35-cp35m-linux_armv6l.whl#sha256=e102a09db17e00ce4674077242b8abe77b140ccbc28084bc872a84f6a1f5dab0 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,198 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp34-cp34m-linux_armv7l.whl#sha256=12bd84214f6f58f4c6f555ae0634e7113ce57a3acdd1f6d868c9e7af24fa02b9 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,198 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp35-cp35m-linux_armv7l.whl#sha256=85ee36207b1cd90230358cc0a26778bda8e49013f9d5f7c8ceb5cea13e0dc6c1 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,198 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp35-cp35m-linux_armv6l.whl#sha256=85ee36207b1cd90230358cc0a26778bda8e49013f9d5f7c8ceb5cea13e0dc6c1 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,198 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp34-cp34m-linux_armv7l.whl#sha256=bab3585f6d546ed89812d88ba4d53169fec7ed73ea4998b71ff15b044cac28fb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,198 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp35-cp35m-linux_armv6l.whl#sha256=35e24788097f96d5805a7deb3fb82097bd48e535242bc017451a29d7b7330b64 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,198 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp35-cp35m-linux_armv7l.whl#sha256=35e24788097f96d5805a7deb3fb82097bd48e535242bc017451a29d7b7330b64 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,199 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp34-cp34m-linux_armv7l.whl#sha256=7bc675908db24bc875711def8f5103a4072f0708f3aa25e4947ca14666b6175b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,199 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp35-cp35m-linux_armv6l.whl#sha256=b3c6463a3333cb6d9246c27e81417b47bf70e14044a9c20fe9f11bed9b674215 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,199 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp35-cp35m-linux_armv7l.whl#sha256=b3c6463a3333cb6d9246c27e81417b47bf70e14044a9c20fe9f11bed9b674215 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,199 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp35-cp35m-linux_armv7l.whl#sha256=800b7833e4834c2b1376c8720f91d0a268d68f015607f79809e1ee7029ef2037 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,199 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp35-cp35m-linux_armv6l.whl#sha256=800b7833e4834c2b1376c8720f91d0a268d68f015607f79809e1ee7029ef2037 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,199 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp34-cp34m-linux_armv7l.whl#sha256=90f903ac669e6630c734222d9d32160aba9bcc7bccfa461f13f96d6003c1c935 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,199 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp35-cp35m-linux_armv7l.whl#sha256=b75ac5587497663f5dc6408cb449fac164d073dc6484492b692955d58e16cf6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,200 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp35-cp35m-linux_armv6l.whl#sha256=b75ac5587497663f5dc6408cb449fac164d073dc6484492b692955d58e16cf6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,200 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp34-cp34m-linux_armv7l.whl#sha256=4f02cb00f9b7473476979a98ce9531d641cf13cc2bc2b300a8d9c3d64d8deceb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:30:10,200 Skipping link: not a file: https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:30:10,200 Skipping link: not a file: https://pypi.org/simple/hapflk/ 2025-09-08T09:30:10,224 Given no hashes to check 1 links for project 'hapflk': discarding no candidates 2025-09-08T09:30:10,226 Collecting hapflk==1.3.3 2025-09-08T09:30:10,227 Created temporary directory: /tmp/pip-unpack-2mu6nny7 2025-09-08T09:30:10,364 Downloading hapflk-1.3.3.tar.gz (276 kB) 2025-09-08T09:30:10,465 Added hapflk==1.3.3 from https://files.pythonhosted.org/packages/ca/fa/51a8f51e01fbc13e8f4b36acbdb6d31188481f4c1ce440b8797ec769d910/hapflk-1.3.3.tar.gz to build tracker '/tmp/pip-build-tracker-kb7ut1_0' 2025-09-08T09:30:10,466 Running setup.py (path:/tmp/pip-wheel-ryro695m/hapflk_674581a7bb8044b99d7a11792179c2ae/setup.py) egg_info for package hapflk 2025-09-08T09:30:10,466 Created temporary directory: /tmp/pip-pip-egg-info-tz3vrzqe 2025-09-08T09:30:10,466 Preparing metadata (setup.py): started 2025-09-08T09:30:10,467 Running command python setup.py egg_info 2025-09-08T09:30:11,758 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:30:11,758 !! 2025-09-08T09:30:11,759 ******************************************************************************** 2025-09-08T09:30:11,759 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:30:11,759 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:30:11,759 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:30:11,759 ******************************************************************************** 2025-09-08T09:30:11,759 !! 2025-09-08T09:30:11,759 self._finalize_license_expression() 2025-09-08T09:30:11,833 running egg_info 2025-09-08T09:30:11,909 creating /tmp/pip-pip-egg-info-tz3vrzqe/hapflk.egg-info 2025-09-08T09:30:11,910 writing /tmp/pip-pip-egg-info-tz3vrzqe/hapflk.egg-info/PKG-INFO 2025-09-08T09:30:11,911 writing dependency_links to /tmp/pip-pip-egg-info-tz3vrzqe/hapflk.egg-info/dependency_links.txt 2025-09-08T09:30:11,912 writing top-level names to /tmp/pip-pip-egg-info-tz3vrzqe/hapflk.egg-info/top_level.txt 2025-09-08T09:30:11,912 writing manifest file '/tmp/pip-pip-egg-info-tz3vrzqe/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:30:12,281 reading manifest file '/tmp/pip-pip-egg-info-tz3vrzqe/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:30:12,282 reading manifest template 'MANIFEST.in' 2025-09-08T09:30:12,284 adding license file 'LICENSE.txt' 2025-09-08T09:30:12,284 adding license file 'COPYING.txt' 2025-09-08T09:30:12,286 writing manifest file '/tmp/pip-pip-egg-info-tz3vrzqe/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:30:12,422 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T09:30:12,426 Source in /tmp/pip-wheel-ryro695m/hapflk_674581a7bb8044b99d7a11792179c2ae has version 1.3.3, which satisfies requirement hapflk==1.3.3 from https://files.pythonhosted.org/packages/ca/fa/51a8f51e01fbc13e8f4b36acbdb6d31188481f4c1ce440b8797ec769d910/hapflk-1.3.3.tar.gz 2025-09-08T09:30:12,426 Removed hapflk==1.3.3 from https://files.pythonhosted.org/packages/ca/fa/51a8f51e01fbc13e8f4b36acbdb6d31188481f4c1ce440b8797ec769d910/hapflk-1.3.3.tar.gz from build tracker '/tmp/pip-build-tracker-kb7ut1_0' 2025-09-08T09:30:12,429 Created temporary directory: /tmp/pip-unpack-9g_7xzfo 2025-09-08T09:30:12,430 Created temporary directory: /tmp/pip-unpack-rqhmqxit 2025-09-08T09:30:12,430 Building wheels for collected packages: hapflk 2025-09-08T09:30:12,431 Created temporary directory: /tmp/pip-wheel-w2xypo9a 2025-09-08T09:30:12,432 DEPRECATION: Building 'hapflk' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'hapflk'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T09:30:12,433 Building wheel for hapflk (setup.py): started 2025-09-08T09:30:12,433 Destination directory: /tmp/pip-wheel-w2xypo9a 2025-09-08T09:30:12,433 Running command python setup.py bdist_wheel 2025-09-08T09:30:13,712 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:30:13,713 !! 2025-09-08T09:30:13,713 ******************************************************************************** 2025-09-08T09:30:13,713 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:30:13,713 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:30:13,713 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:30:13,713 ******************************************************************************** 2025-09-08T09:30:13,714 !! 2025-09-08T09:30:13,714 self._finalize_license_expression() 2025-09-08T09:30:13,714 running bdist_wheel 2025-09-08T09:30:14,089 running build 2025-09-08T09:30:14,089 running build_py 2025-09-08T09:30:14,167 creating build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:30:14,167 copying fastphase/__init__.py -> build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:30:14,168 creating build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:30:14,168 copying hapflk/popgen.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:30:14,169 copying hapflk/InputOutput.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:30:14,170 copying hapflk/nj.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:30:14,170 copying hapflk/data.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:30:14,171 copying hapflk/__init__.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:30:14,173 running build_ext 2025-09-08T09:30:14,521 building 'fastphase.fastphaseCython' extension 2025-09-08T09:30:14,521 creating build/temp.linux-armv7l-cpython-313/fastphase 2025-09-08T09:30:14,522 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c fastphase/fastphaseCython.c -o build/temp.linux-armv7l-cpython-313/fastphase/fastphaseCython.o 2025-09-08T09:30:14,945 fastphase/fastphaseCython.c: In function ‘__Pyx_ListComp_Append’: 2025-09-08T09:30:14,945 fastphase/fastphaseCython.c:916:23: error: lvalue required as left operand of assignment 2025-09-08T09:30:14,945 916 | Py_SIZE(list) = len+1; 2025-09-08T09:30:14,946 | ^ 2025-09-08T09:30:14,946 fastphase/fastphaseCython.c: In function ‘__Pyx_PyList_Append’: 2025-09-08T09:30:14,946 fastphase/fastphaseCython.c:975:23: error: lvalue required as left operand of assignment 2025-09-08T09:30:14,946 975 | Py_SIZE(list) = len+1; 2025-09-08T09:30:14,946 | ^ 2025-09-08T09:30:15,041 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase___init__’: 2025-09-08T09:30:15,045 fastphase/fastphaseCython.c:4188:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:15,045 4188 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:30:15,046 | ^~ 2025-09-08T09:30:15,046 In file included from /usr/include/python3.13/Python.h:76, 2025-09-08T09:30:15,046 from fastphase/fastphaseCython.c:4: 2025-09-08T09:30:15,046 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:30:15,046 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:30:15,046 | ^~~~~~~~~~~~~~~ 2025-09-08T09:30:15,052 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase_4addHaplotype’: 2025-09-08T09:30:15,056 fastphase/fastphaseCython.c:4463:7: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:15,056 4463 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:30:15,056 | ^~ 2025-09-08T09:30:15,056 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:30:15,056 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:30:15,057 | ^~~~~~~~~~~~~~~ 2025-09-08T09:30:15,064 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase_6addGenotype’: 2025-09-08T09:30:15,068 fastphase/fastphaseCython.c:4749:7: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:15,068 4749 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:30:15,068 | ^~ 2025-09-08T09:30:15,069 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:30:15,069 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:30:15,069 | ^~~~~~~~~~~~~~~ 2025-09-08T09:30:16,303 fastphase/fastphaseCython.c: In function ‘__pyx_pf_5numpy_7ndarray___getbuffer__’: 2025-09-08T09:30:16,324 fastphase/fastphaseCython.c:13311:50: error: ‘NPY_C_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_C_CONTIGUOUS’? 2025-09-08T09:30:16,324 13311 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_C_CONTIGUOUS) != 0)) != 0); 2025-09-08T09:30:16,324 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,324 | PyBUF_C_CONTIGUOUS 2025-09-08T09:30:16,326 fastphase/fastphaseCython.c:13311:50: note: each undeclared identifier is reported only once for each function it appears in 2025-09-08T09:30:16,368 fastphase/fastphaseCython.c:13367:50: error: ‘NPY_F_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_F_CONTIGUOUS’? 2025-09-08T09:30:16,369 13367 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_F_CONTIGUOUS) != 0)) != 0); 2025-09-08T09:30:16,369 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,369 | PyBUF_F_CONTIGUOUS 2025-09-08T09:30:16,376 fastphase/fastphaseCython.c: In function ‘__pyx_f_5numpy__util_dtypestring’: 2025-09-08T09:30:16,392 fastphase/fastphaseCython.c:14433:29: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T09:30:16,392 14433 | if (unlikely(__pyx_v_descr->names == Py_None)) { 2025-09-08T09:30:16,392 | ^~ 2025-09-08T09:30:16,392 fastphase/fastphaseCython.c:434:43: note: in definition of macro ‘unlikely’ 2025-09-08T09:30:16,392 434 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T09:30:16,393 | ^ 2025-09-08T09:30:16,411 fastphase/fastphaseCython.c:14437:28: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T09:30:16,411 14437 | __pyx_t_1 = __pyx_v_descr->names; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; 2025-09-08T09:30:16,411 | ^~ 2025-09-08T09:30:16,431 fastphase/fastphaseCython.c:14456:31: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T09:30:16,431 14456 | if (unlikely(__pyx_v_descr->fields == Py_None)) { 2025-09-08T09:30:16,431 | ^~ 2025-09-08T09:30:16,431 fastphase/fastphaseCython.c:434:43: note: in definition of macro ‘unlikely’ 2025-09-08T09:30:16,432 434 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T09:30:16,432 | ^ 2025-09-08T09:30:16,450 fastphase/fastphaseCython.c:14460:51: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T09:30:16,450 14460 | __pyx_t_3 = __Pyx_PyDict_GetItem(__pyx_v_descr->fields, __pyx_v_childname); if (unlikely(__pyx_t_3 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; 2025-09-08T09:30:16,450 | ^~ 2025-09-08T09:30:16,480 fastphase/fastphaseCython.c:14665:79: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘elsize’ 2025-09-08T09:30:16,480 14665 | (__pyx_v_offset[__pyx_t_8]) = ((__pyx_v_offset[__pyx_t_8]) + __pyx_v_child->elsize); 2025-09-08T09:30:16,480 | ^~ 2025-09-08T09:30:16,497 fastphase/fastphaseCython.c: In function ‘__Pyx_InitCachedConstants’: 2025-09-08T09:30:16,515 fastphase/fastphaseCython.c:15588:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:16,515 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,515 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,515 In file included from /usr/include/python3.13/Python.h:101: 2025-09-08T09:30:16,515 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,515 213 | PyCode_New( 2025-09-08T09:30:16,516 | ^~~~~~~~~~ 2025-09-08T09:30:16,535 fastphase/fastphaseCython.c:15588:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:16,535 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,535 | ^~ 2025-09-08T09:30:16,535 | | 2025-09-08T09:30:16,535 | int 2025-09-08T09:30:16,536 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,536 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,536 | ^~~~~ 2025-09-08T09:30:16,536 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:16,536 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,536 | ~~~~~~~~~~^ 2025-09-08T09:30:16,555 fastphase/fastphaseCython.c:15588:242: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:16,555 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,555 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,555 | | 2025-09-08T09:30:16,555 | PyObject * {aka struct _object *} 2025-09-08T09:30:16,555 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,555 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,555 | ^~~~ 2025-09-08T09:30:16,555 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:16,556 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,556 | ~~~~^ 2025-09-08T09:30:16,575 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:16,576 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,576 | ^~~~~~~~~~ 2025-09-08T09:30:16,576 fastphase/fastphaseCython.c:15588:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,576 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,576 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,576 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,576 213 | PyCode_New( 2025-09-08T09:30:16,576 | ^~~~~~~~~~ 2025-09-08T09:30:16,593 fastphase/fastphaseCython.c:15600:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:16,594 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,594 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,594 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,594 213 | PyCode_New( 2025-09-08T09:30:16,594 | ^~~~~~~~~~ 2025-09-08T09:30:16,614 fastphase/fastphaseCython.c:15600:244: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:16,615 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,615 | ^~ 2025-09-08T09:30:16,615 | | 2025-09-08T09:30:16,615 | int 2025-09-08T09:30:16,615 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,615 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,615 | ^~~~~ 2025-09-08T09:30:16,615 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:16,615 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,615 | ~~~~~~~~~~^ 2025-09-08T09:30:16,634 fastphase/fastphaseCython.c:15600:248: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:16,634 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,634 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,635 | | 2025-09-08T09:30:16,635 | PyObject * {aka struct _object *} 2025-09-08T09:30:16,635 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,635 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,635 | ^~~~ 2025-09-08T09:30:16,635 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:16,635 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,635 | ~~~~^ 2025-09-08T09:30:16,655 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:16,655 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,655 | ^~~~~~~~~~ 2025-09-08T09:30:16,655 fastphase/fastphaseCython.c:15600:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,655 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,655 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,656 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,656 213 | PyCode_New( 2025-09-08T09:30:16,656 | ^~~~~~~~~~ 2025-09-08T09:30:16,673 fastphase/fastphaseCython.c:15612:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:16,673 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,674 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,674 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,674 213 | PyCode_New( 2025-09-08T09:30:16,674 | ^~~~~~~~~~ 2025-09-08T09:30:16,693 fastphase/fastphaseCython.c:15612:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:16,693 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,693 | ^~ 2025-09-08T09:30:16,693 | | 2025-09-08T09:30:16,693 | int 2025-09-08T09:30:16,693 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,694 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,694 | ^~~~~ 2025-09-08T09:30:16,694 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:16,694 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,694 | ~~~~~~~~~~^ 2025-09-08T09:30:16,713 fastphase/fastphaseCython.c:15612:249: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:16,713 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,713 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,713 | | 2025-09-08T09:30:16,713 | PyObject * {aka struct _object *} 2025-09-08T09:30:16,713 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,713 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,713 | ^~~~ 2025-09-08T09:30:16,713 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:16,714 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,714 | ~~~~^ 2025-09-08T09:30:16,732 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:16,732 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,732 | ^~~~~~~~~~ 2025-09-08T09:30:16,733 fastphase/fastphaseCython.c:15612:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,733 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,733 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,733 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,733 213 | PyCode_New( 2025-09-08T09:30:16,733 | ^~~~~~~~~~ 2025-09-08T09:30:16,750 fastphase/fastphaseCython.c:15624:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:16,750 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,750 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,750 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,751 213 | PyCode_New( 2025-09-08T09:30:16,751 | ^~~~~~~~~~ 2025-09-08T09:30:16,770 fastphase/fastphaseCython.c:15624:240: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:16,770 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,770 | ^~ 2025-09-08T09:30:16,770 | | 2025-09-08T09:30:16,770 | int 2025-09-08T09:30:16,770 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,770 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,770 | ^~~~~ 2025-09-08T09:30:16,771 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:16,771 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,771 | ~~~~~~~~~~^ 2025-09-08T09:30:16,789 fastphase/fastphaseCython.c:15624:244: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:16,790 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,790 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,790 | | 2025-09-08T09:30:16,790 | PyObject * {aka struct _object *} 2025-09-08T09:30:16,790 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,790 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,790 | ^~~~ 2025-09-08T09:30:16,790 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:16,790 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,790 | ~~~~^ 2025-09-08T09:30:16,809 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:16,809 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,809 | ^~~~~~~~~~ 2025-09-08T09:30:16,809 fastphase/fastphaseCython.c:15624:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,809 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,810 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,810 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,810 213 | PyCode_New( 2025-09-08T09:30:16,810 | ^~~~~~~~~~ 2025-09-08T09:30:16,827 fastphase/fastphaseCython.c:15636:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:16,827 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,827 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,827 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,827 213 | PyCode_New( 2025-09-08T09:30:16,828 | ^~~~~~~~~~ 2025-09-08T09:30:16,847 fastphase/fastphaseCython.c:15636:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:16,847 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,847 | ^~ 2025-09-08T09:30:16,847 | | 2025-09-08T09:30:16,847 | int 2025-09-08T09:30:16,847 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,847 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,847 | ^~~~~ 2025-09-08T09:30:16,847 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:16,848 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,848 | ~~~~~~~~~~^ 2025-09-08T09:30:16,866 fastphase/fastphaseCython.c:15636:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:16,867 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,867 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,867 | | 2025-09-08T09:30:16,867 | PyObject * {aka struct _object *} 2025-09-08T09:30:16,867 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,867 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,867 | ^~~~ 2025-09-08T09:30:16,867 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:16,867 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,867 | ~~~~^ 2025-09-08T09:30:16,886 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:16,886 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,886 | ^~~~~~~~~~ 2025-09-08T09:30:16,886 fastphase/fastphaseCython.c:15636:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,886 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,887 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,887 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,887 213 | PyCode_New( 2025-09-08T09:30:16,887 | ^~~~~~~~~~ 2025-09-08T09:30:16,904 fastphase/fastphaseCython.c:15648:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:16,904 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,904 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,904 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,904 213 | PyCode_New( 2025-09-08T09:30:16,904 | ^~~~~~~~~~ 2025-09-08T09:30:16,924 fastphase/fastphaseCython.c:15648:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:16,924 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,924 | ^~ 2025-09-08T09:30:16,924 | | 2025-09-08T09:30:16,924 | int 2025-09-08T09:30:16,924 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,924 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,924 | ^~~~~ 2025-09-08T09:30:16,924 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:16,925 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,925 | ~~~~~~~~~~^ 2025-09-08T09:30:16,943 fastphase/fastphaseCython.c:15648:242: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:16,943 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,944 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,944 | | 2025-09-08T09:30:16,944 | PyObject * {aka struct _object *} 2025-09-08T09:30:16,944 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,944 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,944 | ^~~~ 2025-09-08T09:30:16,944 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:16,944 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:16,944 | ~~~~^ 2025-09-08T09:30:16,963 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:16,963 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:16,963 | ^~~~~~~~~~ 2025-09-08T09:30:16,963 fastphase/fastphaseCython.c:15648:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:16,964 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,964 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,964 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,964 213 | PyCode_New( 2025-09-08T09:30:16,964 | ^~~~~~~~~~ 2025-09-08T09:30:16,981 fastphase/fastphaseCython.c:15660:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:16,981 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:16,981 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:16,981 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:16,981 213 | PyCode_New( 2025-09-08T09:30:16,981 | ^~~~~~~~~~ 2025-09-08T09:30:17,001 fastphase/fastphaseCython.c:15660:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:17,001 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,001 | ^~ 2025-09-08T09:30:17,001 | | 2025-09-08T09:30:17,001 | int 2025-09-08T09:30:17,001 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,001 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,001 | ^~~~~ 2025-09-08T09:30:17,001 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:17,002 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,002 | ~~~~~~~~~~^ 2025-09-08T09:30:17,020 fastphase/fastphaseCython.c:15660:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:17,021 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,021 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,021 | | 2025-09-08T09:30:17,021 | PyObject * {aka struct _object *} 2025-09-08T09:30:17,021 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,021 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,021 | ^~~~ 2025-09-08T09:30:17,021 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:17,021 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,021 | ~~~~^ 2025-09-08T09:30:17,040 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:17,040 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,040 | ^~~~~~~~~~ 2025-09-08T09:30:17,040 fastphase/fastphaseCython.c:15660:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,041 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,041 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,041 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,041 213 | PyCode_New( 2025-09-08T09:30:17,041 | ^~~~~~~~~~ 2025-09-08T09:30:17,058 fastphase/fastphaseCython.c:15672:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:17,058 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,058 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,058 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,058 213 | PyCode_New( 2025-09-08T09:30:17,059 | ^~~~~~~~~~ 2025-09-08T09:30:17,078 fastphase/fastphaseCython.c:15672:246: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:17,078 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,078 | ^~ 2025-09-08T09:30:17,078 | | 2025-09-08T09:30:17,078 | int 2025-09-08T09:30:17,078 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,078 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,078 | ^~~~~ 2025-09-08T09:30:17,079 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:17,079 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,079 | ~~~~~~~~~~^ 2025-09-08T09:30:17,098 fastphase/fastphaseCython.c:15672:250: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:17,098 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,098 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,098 | | 2025-09-08T09:30:17,098 | PyObject * {aka struct _object *} 2025-09-08T09:30:17,098 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,098 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,098 | ^~~~ 2025-09-08T09:30:17,098 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:17,098 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,099 | ~~~~^ 2025-09-08T09:30:17,117 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:17,117 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,118 | ^~~~~~~~~~ 2025-09-08T09:30:17,118 fastphase/fastphaseCython.c:15672:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,118 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,118 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,118 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,118 213 | PyCode_New( 2025-09-08T09:30:17,118 | ^~~~~~~~~~ 2025-09-08T09:30:17,135 fastphase/fastphaseCython.c:15687:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:17,136 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,136 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,136 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,136 213 | PyCode_New( 2025-09-08T09:30:17,136 | ^~~~~~~~~~ 2025-09-08T09:30:17,155 fastphase/fastphaseCython.c:15687:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:17,155 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,155 | ^~~ 2025-09-08T09:30:17,156 | | 2025-09-08T09:30:17,156 | int 2025-09-08T09:30:17,156 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,156 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,156 | ^~~~~ 2025-09-08T09:30:17,156 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:17,156 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,156 | ~~~~~~~~~~^ 2025-09-08T09:30:17,175 fastphase/fastphaseCython.c:15687:250: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:17,175 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,175 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,175 | | 2025-09-08T09:30:17,175 | PyObject * {aka struct _object *} 2025-09-08T09:30:17,176 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,176 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,176 | ^~~~ 2025-09-08T09:30:17,176 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:17,176 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,176 | ~~~~^ 2025-09-08T09:30:17,195 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:17,195 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,195 | ^~~~~~~~~~ 2025-09-08T09:30:17,195 fastphase/fastphaseCython.c:15687:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,195 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,195 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,195 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,196 213 | PyCode_New( 2025-09-08T09:30:17,196 | ^~~~~~~~~~ 2025-09-08T09:30:17,213 fastphase/fastphaseCython.c:15702:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:17,213 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,213 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,213 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,214 213 | PyCode_New( 2025-09-08T09:30:17,214 | ^~~~~~~~~~ 2025-09-08T09:30:17,233 fastphase/fastphaseCython.c:15702:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:17,233 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,233 | ^~~ 2025-09-08T09:30:17,233 | | 2025-09-08T09:30:17,233 | int 2025-09-08T09:30:17,233 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,233 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,234 | ^~~~~ 2025-09-08T09:30:17,234 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:17,234 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,234 | ~~~~~~~~~~^ 2025-09-08T09:30:17,253 fastphase/fastphaseCython.c:15702:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:17,253 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,253 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,253 | | 2025-09-08T09:30:17,253 | PyObject * {aka struct _object *} 2025-09-08T09:30:17,253 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,253 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,253 | ^~~~ 2025-09-08T09:30:17,253 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:17,253 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,254 | ~~~~^ 2025-09-08T09:30:17,272 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:17,273 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,273 | ^~~~~~~~~~ 2025-09-08T09:30:17,273 fastphase/fastphaseCython.c:15702:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,273 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,273 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,273 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,273 213 | PyCode_New( 2025-09-08T09:30:17,273 | ^~~~~~~~~~ 2025-09-08T09:30:17,291 fastphase/fastphaseCython.c:15717:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:30:17,291 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,291 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,291 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,291 213 | PyCode_New( 2025-09-08T09:30:17,291 | ^~~~~~~~~~ 2025-09-08T09:30:17,310 fastphase/fastphaseCython.c:15717:241: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:30:17,311 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,311 | ^~~ 2025-09-08T09:30:17,311 | | 2025-09-08T09:30:17,311 | int 2025-09-08T09:30:17,311 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,311 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,311 | ^~~~~ 2025-09-08T09:30:17,311 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:30:17,311 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,312 | ~~~~~~~~~~^ 2025-09-08T09:30:17,330 fastphase/fastphaseCython.c:15717:246: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:30:17,330 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,331 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,331 | | 2025-09-08T09:30:17,331 | PyObject * {aka struct _object *} 2025-09-08T09:30:17,331 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,331 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,331 | ^~~~ 2025-09-08T09:30:17,331 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:30:17,331 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:30:17,331 | ~~~~^ 2025-09-08T09:30:17,350 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:30:17,350 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:30:17,350 | ^~~~~~~~~~ 2025-09-08T09:30:17,350 fastphase/fastphaseCython.c:15717:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:30:17,351 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:30:17,351 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,351 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:30:17,351 213 | PyCode_New( 2025-09-08T09:30:17,351 | ^~~~~~~~~~ 2025-09-08T09:30:17,388 fastphase/fastphaseCython.c: In function ‘__Pyx_ParseOptionalKeywords’: 2025-09-08T09:30:17,415 fastphase/fastphaseCython.c:16241:22: error: implicit declaration of function ‘PyUnicode_GET_SIZE’; did you mean ‘PyDict_GET_SIZE’? [-Wimplicit-function-declaration] 2025-09-08T09:30:17,415 16241 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2025-09-08T09:30:17,415 | ^~~~~~~~~~~~~~~~~~ 2025-09-08T09:30:17,415 | PyDict_GET_SIZE 2025-09-08T09:30:17,433 fastphase/fastphaseCython.c: At top level: 2025-09-08T09:30:17,451 fastphase/fastphaseCython.c:16295:12: fatal error: longintrepr.h: No such file or directory 2025-09-08T09:30:17,452 16295 | #include "longintrepr.h" 2025-09-08T09:30:17,452 | ^~~~~~~~~~~~~~~ 2025-09-08T09:30:17,452 compilation terminated. 2025-09-08T09:30:17,456 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-08T09:30:17,628 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T09:30:17,640 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T09:30:17,640 exec(compile('"'"''"'"''"'"' 2025-09-08T09:30:17,640 # This is -- a caller that pip uses to run setup.py 2025-09-08T09:30:17,640 # 2025-09-08T09:30:17,640 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T09:30:17,640 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T09:30:17,640 # - It provides a clear error message when setuptools is not installed. 2025-09-08T09:30:17,640 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T09:30:17,640 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T09:30:17,640 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T09:30:17,640 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T09:30:17,640 import os, sys, tokenize, traceback 2025-09-08T09:30:17,640 2025-09-08T09:30:17,640 try: 2025-09-08T09:30:17,640 import setuptools 2025-09-08T09:30:17,640 except ImportError: 2025-09-08T09:30:17,640 print( 2025-09-08T09:30:17,640 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T09:30:17,640 "the build environment with exception:", 2025-09-08T09:30:17,640 file=sys.stderr, 2025-09-08T09:30:17,640 ) 2025-09-08T09:30:17,640 traceback.print_exc() 2025-09-08T09:30:17,640 sys.exit(1) 2025-09-08T09:30:17,640 2025-09-08T09:30:17,640 __file__ = %r 2025-09-08T09:30:17,640 sys.argv[0] = __file__ 2025-09-08T09:30:17,640 2025-09-08T09:30:17,640 if os.path.exists(__file__): 2025-09-08T09:30:17,640 filename = __file__ 2025-09-08T09:30:17,640 with tokenize.open(__file__) as f: 2025-09-08T09:30:17,640 setup_py_code = f.read() 2025-09-08T09:30:17,640 else: 2025-09-08T09:30:17,640 filename = "" 2025-09-08T09:30:17,640 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T09:30:17,640 2025-09-08T09:30:17,640 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T09:30:17,640 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-ryro695m/hapflk_674581a7bb8044b99d7a11792179c2ae/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-w2xypo9a[/] 2025-09-08T09:30:17,640 [bold magenta]cwd[/]: /tmp/pip-wheel-ryro695m/hapflk_674581a7bb8044b99d7a11792179c2ae/ 2025-09-08T09:30:17,640 Building wheel for hapflk (setup.py): finished with status 'error' 2025-09-08T09:30:17,641 ERROR: Failed building wheel for hapflk 2025-09-08T09:30:17,642 Running setup.py clean for hapflk 2025-09-08T09:30:17,642 Running command python setup.py clean 2025-09-08T09:30:18,925 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:30:18,925 !! 2025-09-08T09:30:18,925 ******************************************************************************** 2025-09-08T09:30:18,926 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:30:18,926 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:30:18,926 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:30:18,926 ******************************************************************************** 2025-09-08T09:30:18,926 !! 2025-09-08T09:30:18,926 self._finalize_license_expression() 2025-09-08T09:30:19,004 running clean 2025-09-08T09:30:19,154 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:30:19,154 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:30:19,155 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T09:30:19,155 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T09:30:19,155 removing 'build' 2025-09-08T09:30:19,290 Failed to build hapflk 2025-09-08T09:30:19,290 ERROR: Failed to build one or more wheels 2025-09-08T09:30:19,291 Exception information: 2025-09-08T09:30:19,291 Traceback (most recent call last): 2025-09-08T09:30:19,291 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T09:30:19,291 status = _inner_run() 2025-09-08T09:30:19,291 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T09:30:19,291 return self.run(options, args) 2025-09-08T09:30:19,291 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T09:30:19,291 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T09:30:19,291 return func(self, options, args) 2025-09-08T09:30:19,291 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T09:30:19,291 raise CommandError("Failed to build one or more wheels") 2025-09-08T09:30:19,291 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T09:30:19,296 Removed build tracker: '/tmp/pip-build-tracker-kb7ut1_0'