2025-09-08T09:34:25,036 Created temporary directory: /tmp/pip-build-tracker-ihuey_km 2025-09-08T09:34:25,037 Initialized build tracking at /tmp/pip-build-tracker-ihuey_km 2025-09-08T09:34:25,037 Created build tracker: /tmp/pip-build-tracker-ihuey_km 2025-09-08T09:34:25,037 Entered build tracker: /tmp/pip-build-tracker-ihuey_km 2025-09-08T09:34:25,037 Created temporary directory: /tmp/pip-wheel-q105q8_a 2025-09-08T09:34:25,040 Created temporary directory: /tmp/pip-ephem-wheel-cache-qr8tkke_ 2025-09-08T09:34:25,100 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T09:34:25,102 2 location(s) to search for versions of hapflk: 2025-09-08T09:34:25,102 * https://pypi.org/simple/hapflk/ 2025-09-08T09:34:25,102 * https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:34:25,102 Fetching project page and analyzing links: https://pypi.org/simple/hapflk/ 2025-09-08T09:34:25,103 Getting page https://pypi.org/simple/hapflk/ 2025-09-08T09:34:25,104 Found index url https://pypi.org/simple/ 2025-09-08T09:34:25,173 Fetched page https://pypi.org/simple/hapflk/ as application/vnd.pypi.simple.v1+json 2025-09-08T09:34:25,176 Found link https://files.pythonhosted.org/packages/b2/ad/85999140cbc66853d701f214fd6548aab07dc46fe29c2d8632c332e97689/hapflk-1.3.2.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.2 2025-09-08T09:34:25,176 Found link https://files.pythonhosted.org/packages/ca/fa/51a8f51e01fbc13e8f4b36acbdb6d31188481f4c1ce440b8797ec769d910/hapflk-1.3.3.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.3 2025-09-08T09:34:25,176 Found link https://files.pythonhosted.org/packages/63/d9/33d91f8a3376ab13ffc0a102caa32a2332fccda2db96009f7cf317593e1b/hapflk-1.3.4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.4 2025-09-08T09:34:25,176 Found link https://files.pythonhosted.org/packages/65/21/a92bba282c49dcacbdb002ed60a7a9b2bddfb98f7eedc382a3d0c134abe7/hapflk-1.3.5.dev0.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev0 2025-09-08T09:34:25,177 Found link https://files.pythonhosted.org/packages/6b/81/cc8f04f774e8728b5167bc58ae12eb4fb2125b784a395fdfefb3e78f7733/hapflk-1.3.5.dev1.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev1 2025-09-08T09:34:25,177 Found link https://files.pythonhosted.org/packages/f8/34/1bd9c49ea13e6be4afec643acfe9f960ae6714fea4d5499a75988e81663e/hapflk-1.3.5.dev2.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev2 2025-09-08T09:34:25,177 Found link https://files.pythonhosted.org/packages/96/14/256f0eda9b570de3b48a7fcff1d062ab7694bd32e7f2ad7ef8bd483b926f/hapflk-1.3.5.dev3.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev3 2025-09-08T09:34:25,177 Found link https://files.pythonhosted.org/packages/aa/c6/c72917e6d4492061b47104c7922b0368c38be20b87bf3e0553d8824a9cfe/hapflk-1.3.5.dev4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev4 2025-09-08T09:34:25,177 Found link https://files.pythonhosted.org/packages/a4/96/4b534230ad9ea961235c5841bde1054bacbb574f88fe19324a776d4b0992/hapflk-1.3.5.dev5.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev5 2025-09-08T09:34:25,178 Found link https://files.pythonhosted.org/packages/5c/f9/f5bd0ea0712da4d11795fda5b40c44be0421a85d6b05f8e9687ce30b8089/hapflk-1.3.5.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5 2025-09-08T09:34:25,178 Found link https://files.pythonhosted.org/packages/51/c4/ed7b823aa136185d750d60f53268cfb6804dcc87183dbe216135e63aa583/hapflk-1.4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.4 2025-09-08T09:34:25,178 Found link https://files.pythonhosted.org/packages/c6/a6/ed1b0c03bdb79de6f288c5e982af3afcaae7a26cdd00ff75dd98bf81a13e/hapflk-2.0.dev0.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev0 2025-09-08T09:34:25,178 Found link https://files.pythonhosted.org/packages/30/60/1dab8e6a54e7ef2c19a62114527d5512da17a09a590d5551610b2fce8195/hapflk-2.0.dev1.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev1 2025-09-08T09:34:25,179 Found link https://files.pythonhosted.org/packages/89/5d/fa3af0a5d868d5154d1516696a317c13bcb686706143ec2052f789e17017/hapflk-2.0.dev2.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev2 2025-09-08T09:34:25,179 Skipping link: No binaries permitted for hapflk: https://files.pythonhosted.org/packages/17/3e/be1a90cc099e9ab4e2031be8539dad16495f9fc61f72424cee5dd0260f08/hapflk-2.1-py3-none-any.whl (from https://pypi.org/simple/hapflk/) (requires-python:>=3.8) 2025-09-08T09:34:25,179 Found link https://files.pythonhosted.org/packages/6c/ea/807cf8f36f1af15848db5264d8af4a260c081525943a932d69a81543ca8e/hapflk-2.1.tar.gz (from https://pypi.org/simple/hapflk/) (requires-python:>=3.8), version: 2.1 2025-09-08T09:34:25,180 Fetching project page and analyzing links: https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:34:25,180 Getting page https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:34:25,181 Found index url https://www.piwheels.org/simple/ 2025-09-08T09:34:25,272 Fetched page https://www.piwheels.org/simple/hapflk/ as text/html 2025-09-08T09:34:25,279 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-2.1-py3-none-any.whl#sha256=12ca832837ecb12292516fbb6ab0aff875d2be9a41f09362808a6973e3b3114e (from https://www.piwheels.org/simple/hapflk/) (requires-python:>=3.8) 2025-09-08T09:34:25,279 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp35-cp35m-linux_armv6l.whl#sha256=f7038eca9bba9d085b3b2ba6c6cba6778b3767a641d8c77b4a6770167d4d322d (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,279 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp35-cp35m-linux_armv7l.whl#sha256=f7038eca9bba9d085b3b2ba6c6cba6778b3767a641d8c77b4a6770167d4d322d (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,279 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp34-cp34m-linux_armv7l.whl#sha256=fb3798d9a4c7b3e2fb4b977a8d6dc3ae44b4cb0102ca67167d58182da2bdce0b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,280 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp35-cp35m-linux_armv6l.whl#sha256=73ecd00dcf029388178f31b3cbf3c04cbb264f752a6d05214bd6df8db316df6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,280 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp35-cp35m-linux_armv7l.whl#sha256=73ecd00dcf029388178f31b3cbf3c04cbb264f752a6d05214bd6df8db316df6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,280 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp34-cp34m-linux_armv7l.whl#sha256=5a64b9b9dae78e36eca456a2e9709b21d7a7bdb908a3d47e2b6529e1a5a64d1b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,280 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp34-cp34m-linux_armv7l.whl#sha256=fc973aad2b2ab1f031c8f17bd84b9707d283a7ce888fd944c7af2b0a925a4deb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,280 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp35-cp35m-linux_armv7l.whl#sha256=2801d5ffbdc9b9fcbf8e6cce77a1514b01ca28f562e550bfd093296db4ef9a95 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,280 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp35-cp35m-linux_armv6l.whl#sha256=2801d5ffbdc9b9fcbf8e6cce77a1514b01ca28f562e550bfd093296db4ef9a95 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,281 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp35-cp35m-linux_armv6l.whl#sha256=36fb4c6462ef30dda62684182251105eb2c822311065fd8ecd3b8a50f71ff244 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,281 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp35-cp35m-linux_armv7l.whl#sha256=36fb4c6462ef30dda62684182251105eb2c822311065fd8ecd3b8a50f71ff244 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,281 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp34-cp34m-linux_armv7l.whl#sha256=ba9a150f4c149df5b850e3dd31a6b7c442c50be76885355dc4a61611769ea367 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,281 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp34-cp34m-linux_armv7l.whl#sha256=12a3afe8bcb1936f5e30f374a25c6c3ad3f95ae5f59debcd89d3411d54899c86 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,281 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp35-cp35m-linux_armv7l.whl#sha256=e102a09db17e00ce4674077242b8abe77b140ccbc28084bc872a84f6a1f5dab0 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,281 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp35-cp35m-linux_armv6l.whl#sha256=e102a09db17e00ce4674077242b8abe77b140ccbc28084bc872a84f6a1f5dab0 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,281 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp34-cp34m-linux_armv7l.whl#sha256=12bd84214f6f58f4c6f555ae0634e7113ce57a3acdd1f6d868c9e7af24fa02b9 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,281 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp35-cp35m-linux_armv7l.whl#sha256=85ee36207b1cd90230358cc0a26778bda8e49013f9d5f7c8ceb5cea13e0dc6c1 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,282 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp35-cp35m-linux_armv6l.whl#sha256=85ee36207b1cd90230358cc0a26778bda8e49013f9d5f7c8ceb5cea13e0dc6c1 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,282 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp34-cp34m-linux_armv7l.whl#sha256=bab3585f6d546ed89812d88ba4d53169fec7ed73ea4998b71ff15b044cac28fb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,282 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp35-cp35m-linux_armv6l.whl#sha256=35e24788097f96d5805a7deb3fb82097bd48e535242bc017451a29d7b7330b64 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,282 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp35-cp35m-linux_armv7l.whl#sha256=35e24788097f96d5805a7deb3fb82097bd48e535242bc017451a29d7b7330b64 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,282 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp34-cp34m-linux_armv7l.whl#sha256=7bc675908db24bc875711def8f5103a4072f0708f3aa25e4947ca14666b6175b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,282 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp35-cp35m-linux_armv6l.whl#sha256=b3c6463a3333cb6d9246c27e81417b47bf70e14044a9c20fe9f11bed9b674215 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,282 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp35-cp35m-linux_armv7l.whl#sha256=b3c6463a3333cb6d9246c27e81417b47bf70e14044a9c20fe9f11bed9b674215 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,283 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp35-cp35m-linux_armv7l.whl#sha256=800b7833e4834c2b1376c8720f91d0a268d68f015607f79809e1ee7029ef2037 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,283 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp35-cp35m-linux_armv6l.whl#sha256=800b7833e4834c2b1376c8720f91d0a268d68f015607f79809e1ee7029ef2037 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,283 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp34-cp34m-linux_armv7l.whl#sha256=90f903ac669e6630c734222d9d32160aba9bcc7bccfa461f13f96d6003c1c935 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,283 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp35-cp35m-linux_armv7l.whl#sha256=b75ac5587497663f5dc6408cb449fac164d073dc6484492b692955d58e16cf6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,283 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp35-cp35m-linux_armv6l.whl#sha256=b75ac5587497663f5dc6408cb449fac164d073dc6484492b692955d58e16cf6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,283 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp34-cp34m-linux_armv7l.whl#sha256=4f02cb00f9b7473476979a98ce9531d641cf13cc2bc2b300a8d9c3d64d8deceb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:25,283 Skipping link: not a file: https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:34:25,284 Skipping link: not a file: https://pypi.org/simple/hapflk/ 2025-09-08T09:34:25,309 Given no hashes to check 1 links for project 'hapflk': discarding no candidates 2025-09-08T09:34:25,310 Collecting hapflk==1.3.5 2025-09-08T09:34:25,312 Created temporary directory: /tmp/pip-unpack-crx64puy 2025-09-08T09:34:25,450 Downloading hapflk-1.3.5.tar.gz (277 kB) 2025-09-08T09:34:25,542 Added hapflk==1.3.5 from https://files.pythonhosted.org/packages/5c/f9/f5bd0ea0712da4d11795fda5b40c44be0421a85d6b05f8e9687ce30b8089/hapflk-1.3.5.tar.gz to build tracker '/tmp/pip-build-tracker-ihuey_km' 2025-09-08T09:34:25,543 Running setup.py (path:/tmp/pip-wheel-q105q8_a/hapflk_0252480c3b9444b18e4cb98d743abf7f/setup.py) egg_info for package hapflk 2025-09-08T09:34:25,543 Created temporary directory: /tmp/pip-pip-egg-info-tatdadn8 2025-09-08T09:34:25,543 Preparing metadata (setup.py): started 2025-09-08T09:34:25,544 Running command python setup.py egg_info 2025-09-08T09:34:26,830 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:34:26,830 !! 2025-09-08T09:34:26,830 ******************************************************************************** 2025-09-08T09:34:26,830 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:34:26,831 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:34:26,831 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:34:26,831 ******************************************************************************** 2025-09-08T09:34:26,831 !! 2025-09-08T09:34:26,831 self._finalize_license_expression() 2025-09-08T09:34:26,903 running egg_info 2025-09-08T09:34:26,980 creating /tmp/pip-pip-egg-info-tatdadn8/hapflk.egg-info 2025-09-08T09:34:26,980 writing /tmp/pip-pip-egg-info-tatdadn8/hapflk.egg-info/PKG-INFO 2025-09-08T09:34:26,982 writing dependency_links to /tmp/pip-pip-egg-info-tatdadn8/hapflk.egg-info/dependency_links.txt 2025-09-08T09:34:26,982 writing top-level names to /tmp/pip-pip-egg-info-tatdadn8/hapflk.egg-info/top_level.txt 2025-09-08T09:34:26,983 writing manifest file '/tmp/pip-pip-egg-info-tatdadn8/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:34:27,356 reading manifest file '/tmp/pip-pip-egg-info-tatdadn8/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:34:27,357 reading manifest template 'MANIFEST.in' 2025-09-08T09:34:27,358 adding license file 'LICENSE.txt' 2025-09-08T09:34:27,358 adding license file 'COPYING.txt' 2025-09-08T09:34:27,361 writing manifest file '/tmp/pip-pip-egg-info-tatdadn8/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:34:27,497 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T09:34:27,501 Source in /tmp/pip-wheel-q105q8_a/hapflk_0252480c3b9444b18e4cb98d743abf7f has version 1.3.5, which satisfies requirement hapflk==1.3.5 from https://files.pythonhosted.org/packages/5c/f9/f5bd0ea0712da4d11795fda5b40c44be0421a85d6b05f8e9687ce30b8089/hapflk-1.3.5.tar.gz 2025-09-08T09:34:27,502 Removed hapflk==1.3.5 from https://files.pythonhosted.org/packages/5c/f9/f5bd0ea0712da4d11795fda5b40c44be0421a85d6b05f8e9687ce30b8089/hapflk-1.3.5.tar.gz from build tracker '/tmp/pip-build-tracker-ihuey_km' 2025-09-08T09:34:27,505 Created temporary directory: /tmp/pip-unpack-vekm536f 2025-09-08T09:34:27,505 Created temporary directory: /tmp/pip-unpack-_zx8sgm0 2025-09-08T09:34:27,505 Building wheels for collected packages: hapflk 2025-09-08T09:34:27,506 Created temporary directory: /tmp/pip-wheel-5qy11ba6 2025-09-08T09:34:27,507 DEPRECATION: Building 'hapflk' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'hapflk'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T09:34:27,508 Building wheel for hapflk (setup.py): started 2025-09-08T09:34:27,509 Destination directory: /tmp/pip-wheel-5qy11ba6 2025-09-08T09:34:27,509 Running command python setup.py bdist_wheel 2025-09-08T09:34:28,780 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:34:28,780 !! 2025-09-08T09:34:28,780 ******************************************************************************** 2025-09-08T09:34:28,780 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:34:28,780 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:34:28,781 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:34:28,781 ******************************************************************************** 2025-09-08T09:34:28,781 !! 2025-09-08T09:34:28,781 self._finalize_license_expression() 2025-09-08T09:34:28,781 running bdist_wheel 2025-09-08T09:34:29,146 running build 2025-09-08T09:34:29,146 running build_py 2025-09-08T09:34:29,223 creating build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:34:29,223 copying fastphase/fphoptim.py -> build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:34:29,224 copying fastphase/__init__.py -> build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:34:29,225 creating build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:29,225 copying hapflk/popgen.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:29,226 copying hapflk/InputOutput.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:29,226 copying hapflk/nj.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:29,227 copying hapflk/data.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:29,227 copying hapflk/__init__.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:29,229 running build_ext 2025-09-08T09:34:29,558 building 'fastphase.fastphaseCython' extension 2025-09-08T09:34:29,559 creating build/temp.linux-armv7l-cpython-313/fastphase 2025-09-08T09:34:29,559 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c fastphase/fastphaseCython.c -o build/temp.linux-armv7l-cpython-313/fastphase/fastphaseCython.o 2025-09-08T09:34:29,976 fastphase/fastphaseCython.c: In function ‘__Pyx_ListComp_Append’: 2025-09-08T09:34:29,976 fastphase/fastphaseCython.c:916:23: error: lvalue required as left operand of assignment 2025-09-08T09:34:29,977 916 | Py_SIZE(list) = len+1; 2025-09-08T09:34:29,977 | ^ 2025-09-08T09:34:29,978 fastphase/fastphaseCython.c: In function ‘__Pyx_PyList_Append’: 2025-09-08T09:34:29,978 fastphase/fastphaseCython.c:975:23: error: lvalue required as left operand of assignment 2025-09-08T09:34:29,978 975 | Py_SIZE(list) = len+1; 2025-09-08T09:34:29,978 | ^ 2025-09-08T09:34:30,073 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase___init__’: 2025-09-08T09:34:30,077 fastphase/fastphaseCython.c:4188:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:30,077 4188 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:34:30,077 | ^~ 2025-09-08T09:34:30,078 In file included from /usr/include/python3.13/Python.h:76, 2025-09-08T09:34:30,078 from fastphase/fastphaseCython.c:4: 2025-09-08T09:34:30,078 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:34:30,078 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:34:30,078 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:30,084 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase_4addHaplotype’: 2025-09-08T09:34:30,089 fastphase/fastphaseCython.c:4463:7: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:30,089 4463 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:34:30,089 | ^~ 2025-09-08T09:34:30,089 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:34:30,089 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:34:30,089 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:30,097 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase_6addGenotype’: 2025-09-08T09:34:30,102 fastphase/fastphaseCython.c:4749:7: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:30,102 4749 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:34:30,102 | ^~ 2025-09-08T09:34:30,102 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:34:30,103 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:34:30,103 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:31,330 fastphase/fastphaseCython.c: In function ‘__pyx_pf_5numpy_7ndarray___getbuffer__’: 2025-09-08T09:34:31,352 fastphase/fastphaseCython.c:13311:50: error: ‘NPY_C_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_C_CONTIGUOUS’? 2025-09-08T09:34:31,352 13311 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_C_CONTIGUOUS) != 0)) != 0); 2025-09-08T09:34:31,352 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,352 | PyBUF_C_CONTIGUOUS 2025-09-08T09:34:31,354 fastphase/fastphaseCython.c:13311:50: note: each undeclared identifier is reported only once for each function it appears in 2025-09-08T09:34:31,397 fastphase/fastphaseCython.c:13367:50: error: ‘NPY_F_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_F_CONTIGUOUS’? 2025-09-08T09:34:31,397 13367 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_F_CONTIGUOUS) != 0)) != 0); 2025-09-08T09:34:31,397 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,398 | PyBUF_F_CONTIGUOUS 2025-09-08T09:34:31,405 fastphase/fastphaseCython.c: In function ‘__pyx_f_5numpy__util_dtypestring’: 2025-09-08T09:34:31,421 fastphase/fastphaseCython.c:14433:29: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T09:34:31,422 14433 | if (unlikely(__pyx_v_descr->names == Py_None)) { 2025-09-08T09:34:31,422 | ^~ 2025-09-08T09:34:31,422 fastphase/fastphaseCython.c:434:43: note: in definition of macro ‘unlikely’ 2025-09-08T09:34:31,422 434 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T09:34:31,422 | ^ 2025-09-08T09:34:31,441 fastphase/fastphaseCython.c:14437:28: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T09:34:31,441 14437 | __pyx_t_1 = __pyx_v_descr->names; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; 2025-09-08T09:34:31,441 | ^~ 2025-09-08T09:34:31,461 fastphase/fastphaseCython.c:14456:31: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T09:34:31,462 14456 | if (unlikely(__pyx_v_descr->fields == Py_None)) { 2025-09-08T09:34:31,462 | ^~ 2025-09-08T09:34:31,462 fastphase/fastphaseCython.c:434:43: note: in definition of macro ‘unlikely’ 2025-09-08T09:34:31,462 434 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T09:34:31,462 | ^ 2025-09-08T09:34:31,481 fastphase/fastphaseCython.c:14460:51: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T09:34:31,481 14460 | __pyx_t_3 = __Pyx_PyDict_GetItem(__pyx_v_descr->fields, __pyx_v_childname); if (unlikely(__pyx_t_3 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; 2025-09-08T09:34:31,481 | ^~ 2025-09-08T09:34:31,512 fastphase/fastphaseCython.c:14665:79: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘elsize’ 2025-09-08T09:34:31,512 14665 | (__pyx_v_offset[__pyx_t_8]) = ((__pyx_v_offset[__pyx_t_8]) + __pyx_v_child->elsize); 2025-09-08T09:34:31,512 | ^~ 2025-09-08T09:34:31,529 fastphase/fastphaseCython.c: In function ‘__Pyx_InitCachedConstants’: 2025-09-08T09:34:31,547 fastphase/fastphaseCython.c:15588:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:31,547 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,547 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,548 In file included from /usr/include/python3.13/Python.h:101: 2025-09-08T09:34:31,548 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,548 213 | PyCode_New( 2025-09-08T09:34:31,548 | ^~~~~~~~~~ 2025-09-08T09:34:31,568 fastphase/fastphaseCython.c:15588:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:31,568 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,568 | ^~ 2025-09-08T09:34:31,568 | | 2025-09-08T09:34:31,569 | int 2025-09-08T09:34:31,569 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,569 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,569 | ^~~~~ 2025-09-08T09:34:31,569 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:31,569 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,569 | ~~~~~~~~~~^ 2025-09-08T09:34:31,589 fastphase/fastphaseCython.c:15588:242: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:31,589 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,589 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,589 | | 2025-09-08T09:34:31,590 | PyObject * {aka struct _object *} 2025-09-08T09:34:31,590 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,590 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,590 | ^~~~ 2025-09-08T09:34:31,590 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:31,590 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,590 | ~~~~^ 2025-09-08T09:34:31,610 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:31,610 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,610 | ^~~~~~~~~~ 2025-09-08T09:34:31,610 fastphase/fastphaseCython.c:15588:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,610 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,610 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,611 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,611 213 | PyCode_New( 2025-09-08T09:34:31,611 | ^~~~~~~~~~ 2025-09-08T09:34:31,629 fastphase/fastphaseCython.c:15600:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:31,629 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,629 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,629 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,629 213 | PyCode_New( 2025-09-08T09:34:31,629 | ^~~~~~~~~~ 2025-09-08T09:34:31,649 fastphase/fastphaseCython.c:15600:244: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:31,649 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,649 | ^~ 2025-09-08T09:34:31,650 | | 2025-09-08T09:34:31,650 | int 2025-09-08T09:34:31,650 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,650 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,650 | ^~~~~ 2025-09-08T09:34:31,650 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:31,650 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,650 | ~~~~~~~~~~^ 2025-09-08T09:34:31,673 fastphase/fastphaseCython.c:15600:248: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:31,673 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,674 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,674 | | 2025-09-08T09:34:31,674 | PyObject * {aka struct _object *} 2025-09-08T09:34:31,674 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,674 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,674 | ^~~~ 2025-09-08T09:34:31,674 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:31,674 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,675 | ~~~~^ 2025-09-08T09:34:31,695 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:31,695 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,695 | ^~~~~~~~~~ 2025-09-08T09:34:31,695 fastphase/fastphaseCython.c:15600:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,696 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,696 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,696 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,696 213 | PyCode_New( 2025-09-08T09:34:31,696 | ^~~~~~~~~~ 2025-09-08T09:34:31,713 fastphase/fastphaseCython.c:15612:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:31,713 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,713 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,713 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,714 213 | PyCode_New( 2025-09-08T09:34:31,714 | ^~~~~~~~~~ 2025-09-08T09:34:31,733 fastphase/fastphaseCython.c:15612:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:31,733 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,733 | ^~ 2025-09-08T09:34:31,733 | | 2025-09-08T09:34:31,733 | int 2025-09-08T09:34:31,733 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,733 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,733 | ^~~~~ 2025-09-08T09:34:31,734 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:31,734 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,734 | ~~~~~~~~~~^ 2025-09-08T09:34:31,752 fastphase/fastphaseCython.c:15612:249: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:31,752 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,753 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,753 | | 2025-09-08T09:34:31,753 | PyObject * {aka struct _object *} 2025-09-08T09:34:31,753 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,753 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,753 | ^~~~ 2025-09-08T09:34:31,753 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:31,753 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,753 | ~~~~^ 2025-09-08T09:34:31,772 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:31,772 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,772 | ^~~~~~~~~~ 2025-09-08T09:34:31,772 fastphase/fastphaseCython.c:15612:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,772 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,773 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,773 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,773 213 | PyCode_New( 2025-09-08T09:34:31,773 | ^~~~~~~~~~ 2025-09-08T09:34:31,790 fastphase/fastphaseCython.c:15624:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:31,790 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,790 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,790 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,790 213 | PyCode_New( 2025-09-08T09:34:31,790 | ^~~~~~~~~~ 2025-09-08T09:34:31,810 fastphase/fastphaseCython.c:15624:240: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:31,810 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,810 | ^~ 2025-09-08T09:34:31,810 | | 2025-09-08T09:34:31,810 | int 2025-09-08T09:34:31,810 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,810 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,810 | ^~~~~ 2025-09-08T09:34:31,810 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:31,811 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,811 | ~~~~~~~~~~^ 2025-09-08T09:34:31,829 fastphase/fastphaseCython.c:15624:244: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:31,829 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,829 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,830 | | 2025-09-08T09:34:31,830 | PyObject * {aka struct _object *} 2025-09-08T09:34:31,830 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,830 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,830 | ^~~~ 2025-09-08T09:34:31,830 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:31,830 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,830 | ~~~~^ 2025-09-08T09:34:31,849 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:31,849 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,849 | ^~~~~~~~~~ 2025-09-08T09:34:31,849 fastphase/fastphaseCython.c:15624:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,849 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,849 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,849 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,850 213 | PyCode_New( 2025-09-08T09:34:31,850 | ^~~~~~~~~~ 2025-09-08T09:34:31,867 fastphase/fastphaseCython.c:15636:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:31,867 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,867 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,867 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,867 213 | PyCode_New( 2025-09-08T09:34:31,867 | ^~~~~~~~~~ 2025-09-08T09:34:31,886 fastphase/fastphaseCython.c:15636:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:31,887 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,887 | ^~ 2025-09-08T09:34:31,887 | | 2025-09-08T09:34:31,887 | int 2025-09-08T09:34:31,887 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,887 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,887 | ^~~~~ 2025-09-08T09:34:31,887 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:31,887 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,887 | ~~~~~~~~~~^ 2025-09-08T09:34:31,906 fastphase/fastphaseCython.c:15636:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:31,906 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,906 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,907 | | 2025-09-08T09:34:31,907 | PyObject * {aka struct _object *} 2025-09-08T09:34:31,907 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,907 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,907 | ^~~~ 2025-09-08T09:34:31,907 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:31,907 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,907 | ~~~~^ 2025-09-08T09:34:31,926 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:31,926 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,926 | ^~~~~~~~~~ 2025-09-08T09:34:31,926 fastphase/fastphaseCython.c:15636:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,926 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,926 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,926 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,927 213 | PyCode_New( 2025-09-08T09:34:31,927 | ^~~~~~~~~~ 2025-09-08T09:34:31,944 fastphase/fastphaseCython.c:15648:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:31,944 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,944 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,944 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:31,944 213 | PyCode_New( 2025-09-08T09:34:31,944 | ^~~~~~~~~~ 2025-09-08T09:34:31,964 fastphase/fastphaseCython.c:15648:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:31,964 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,964 | ^~ 2025-09-08T09:34:31,964 | | 2025-09-08T09:34:31,965 | int 2025-09-08T09:34:31,965 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,965 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,965 | ^~~~~ 2025-09-08T09:34:31,965 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:31,965 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,965 | ~~~~~~~~~~^ 2025-09-08T09:34:31,985 fastphase/fastphaseCython.c:15648:242: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:31,985 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:31,985 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:31,985 | | 2025-09-08T09:34:31,985 | PyObject * {aka struct _object *} 2025-09-08T09:34:31,985 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:31,985 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:31,985 | ^~~~ 2025-09-08T09:34:31,986 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:31,986 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:31,986 | ~~~~^ 2025-09-08T09:34:32,005 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:32,005 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,005 | ^~~~~~~~~~ 2025-09-08T09:34:32,005 fastphase/fastphaseCython.c:15648:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,005 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,005 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,005 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,006 213 | PyCode_New( 2025-09-08T09:34:32,006 | ^~~~~~~~~~ 2025-09-08T09:34:32,024 fastphase/fastphaseCython.c:15660:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:32,024 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,024 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,024 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,024 213 | PyCode_New( 2025-09-08T09:34:32,024 | ^~~~~~~~~~ 2025-09-08T09:34:32,044 fastphase/fastphaseCython.c:15660:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:32,044 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,044 | ^~ 2025-09-08T09:34:32,044 | | 2025-09-08T09:34:32,044 | int 2025-09-08T09:34:32,044 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,044 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,044 | ^~~~~ 2025-09-08T09:34:32,045 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:32,045 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,045 | ~~~~~~~~~~^ 2025-09-08T09:34:32,065 fastphase/fastphaseCython.c:15660:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:32,065 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,065 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,065 | | 2025-09-08T09:34:32,065 | PyObject * {aka struct _object *} 2025-09-08T09:34:32,066 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,066 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,066 | ^~~~ 2025-09-08T09:34:32,066 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:32,066 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,066 | ~~~~^ 2025-09-08T09:34:32,085 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:32,085 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,085 | ^~~~~~~~~~ 2025-09-08T09:34:32,085 fastphase/fastphaseCython.c:15660:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,085 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,085 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,085 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,085 213 | PyCode_New( 2025-09-08T09:34:32,086 | ^~~~~~~~~~ 2025-09-08T09:34:32,103 fastphase/fastphaseCython.c:15672:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:32,103 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,103 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,103 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,103 213 | PyCode_New( 2025-09-08T09:34:32,103 | ^~~~~~~~~~ 2025-09-08T09:34:32,122 fastphase/fastphaseCython.c:15672:246: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:32,123 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,123 | ^~ 2025-09-08T09:34:32,123 | | 2025-09-08T09:34:32,123 | int 2025-09-08T09:34:32,123 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,123 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,123 | ^~~~~ 2025-09-08T09:34:32,123 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:32,123 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,123 | ~~~~~~~~~~^ 2025-09-08T09:34:32,142 fastphase/fastphaseCython.c:15672:250: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:32,142 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,142 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,142 | | 2025-09-08T09:34:32,142 | PyObject * {aka struct _object *} 2025-09-08T09:34:32,143 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,143 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,143 | ^~~~ 2025-09-08T09:34:32,143 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:32,143 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,143 | ~~~~^ 2025-09-08T09:34:32,162 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:32,162 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,162 | ^~~~~~~~~~ 2025-09-08T09:34:32,162 fastphase/fastphaseCython.c:15672:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,162 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,162 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,162 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,163 213 | PyCode_New( 2025-09-08T09:34:32,163 | ^~~~~~~~~~ 2025-09-08T09:34:32,180 fastphase/fastphaseCython.c:15687:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:32,180 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,180 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,180 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,180 213 | PyCode_New( 2025-09-08T09:34:32,181 | ^~~~~~~~~~ 2025-09-08T09:34:32,200 fastphase/fastphaseCython.c:15687:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:32,200 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,200 | ^~~ 2025-09-08T09:34:32,200 | | 2025-09-08T09:34:32,200 | int 2025-09-08T09:34:32,200 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,200 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,200 | ^~~~~ 2025-09-08T09:34:32,201 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:32,201 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,201 | ~~~~~~~~~~^ 2025-09-08T09:34:32,220 fastphase/fastphaseCython.c:15687:250: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:32,220 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,220 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,220 | | 2025-09-08T09:34:32,220 | PyObject * {aka struct _object *} 2025-09-08T09:34:32,220 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,220 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,220 | ^~~~ 2025-09-08T09:34:32,220 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:32,220 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,221 | ~~~~^ 2025-09-08T09:34:32,239 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:32,239 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,239 | ^~~~~~~~~~ 2025-09-08T09:34:32,240 fastphase/fastphaseCython.c:15687:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,240 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,240 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,240 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,240 213 | PyCode_New( 2025-09-08T09:34:32,240 | ^~~~~~~~~~ 2025-09-08T09:34:32,257 fastphase/fastphaseCython.c:15702:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:32,258 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,258 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,258 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,258 213 | PyCode_New( 2025-09-08T09:34:32,258 | ^~~~~~~~~~ 2025-09-08T09:34:32,277 fastphase/fastphaseCython.c:15702:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:32,277 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,277 | ^~~ 2025-09-08T09:34:32,278 | | 2025-09-08T09:34:32,278 | int 2025-09-08T09:34:32,278 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,278 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,278 | ^~~~~ 2025-09-08T09:34:32,278 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:32,278 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,278 | ~~~~~~~~~~^ 2025-09-08T09:34:32,297 fastphase/fastphaseCython.c:15702:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:32,297 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,297 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,297 | | 2025-09-08T09:34:32,297 | PyObject * {aka struct _object *} 2025-09-08T09:34:32,298 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,298 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,298 | ^~~~ 2025-09-08T09:34:32,298 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:32,298 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,298 | ~~~~^ 2025-09-08T09:34:32,317 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:32,317 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,317 | ^~~~~~~~~~ 2025-09-08T09:34:32,317 fastphase/fastphaseCython.c:15702:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,317 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,317 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,318 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,318 213 | PyCode_New( 2025-09-08T09:34:32,318 | ^~~~~~~~~~ 2025-09-08T09:34:32,335 fastphase/fastphaseCython.c:15717:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:32,335 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,335 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,335 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,336 213 | PyCode_New( 2025-09-08T09:34:32,336 | ^~~~~~~~~~ 2025-09-08T09:34:32,355 fastphase/fastphaseCython.c:15717:241: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:32,355 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,355 | ^~~ 2025-09-08T09:34:32,355 | | 2025-09-08T09:34:32,355 | int 2025-09-08T09:34:32,355 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,355 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,356 | ^~~~~ 2025-09-08T09:34:32,356 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:32,356 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,356 | ~~~~~~~~~~^ 2025-09-08T09:34:32,375 fastphase/fastphaseCython.c:15717:246: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:32,375 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,375 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,375 | | 2025-09-08T09:34:32,375 | PyObject * {aka struct _object *} 2025-09-08T09:34:32,375 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,375 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,375 | ^~~~ 2025-09-08T09:34:32,376 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:32,376 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:32,376 | ~~~~^ 2025-09-08T09:34:32,394 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:32,395 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:32,395 | ^~~~~~~~~~ 2025-09-08T09:34:32,395 fastphase/fastphaseCython.c:15717:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:32,395 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:32,395 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,395 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:32,395 213 | PyCode_New( 2025-09-08T09:34:32,395 | ^~~~~~~~~~ 2025-09-08T09:34:32,432 fastphase/fastphaseCython.c: In function ‘__Pyx_ParseOptionalKeywords’: 2025-09-08T09:34:32,459 fastphase/fastphaseCython.c:16241:22: error: implicit declaration of function ‘PyUnicode_GET_SIZE’; did you mean ‘PyDict_GET_SIZE’? [-Wimplicit-function-declaration] 2025-09-08T09:34:32,459 16241 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2025-09-08T09:34:32,459 | ^~~~~~~~~~~~~~~~~~ 2025-09-08T09:34:32,460 | PyDict_GET_SIZE 2025-09-08T09:34:32,477 fastphase/fastphaseCython.c: At top level: 2025-09-08T09:34:32,496 fastphase/fastphaseCython.c:16295:12: fatal error: longintrepr.h: No such file or directory 2025-09-08T09:34:32,496 16295 | #include "longintrepr.h" 2025-09-08T09:34:32,496 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:32,496 compilation terminated. 2025-09-08T09:34:32,502 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-08T09:34:32,673 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T09:34:32,685 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T09:34:32,685 exec(compile('"'"''"'"''"'"' 2025-09-08T09:34:32,685 # This is -- a caller that pip uses to run setup.py 2025-09-08T09:34:32,685 # 2025-09-08T09:34:32,685 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T09:34:32,685 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T09:34:32,685 # - It provides a clear error message when setuptools is not installed. 2025-09-08T09:34:32,685 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T09:34:32,685 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T09:34:32,685 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T09:34:32,685 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T09:34:32,685 import os, sys, tokenize, traceback 2025-09-08T09:34:32,685 2025-09-08T09:34:32,685 try: 2025-09-08T09:34:32,685 import setuptools 2025-09-08T09:34:32,685 except ImportError: 2025-09-08T09:34:32,685 print( 2025-09-08T09:34:32,685 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T09:34:32,685 "the build environment with exception:", 2025-09-08T09:34:32,685 file=sys.stderr, 2025-09-08T09:34:32,685 ) 2025-09-08T09:34:32,685 traceback.print_exc() 2025-09-08T09:34:32,685 sys.exit(1) 2025-09-08T09:34:32,685 2025-09-08T09:34:32,685 __file__ = %r 2025-09-08T09:34:32,685 sys.argv[0] = __file__ 2025-09-08T09:34:32,685 2025-09-08T09:34:32,685 if os.path.exists(__file__): 2025-09-08T09:34:32,685 filename = __file__ 2025-09-08T09:34:32,685 with tokenize.open(__file__) as f: 2025-09-08T09:34:32,685 setup_py_code = f.read() 2025-09-08T09:34:32,685 else: 2025-09-08T09:34:32,685 filename = "" 2025-09-08T09:34:32,685 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T09:34:32,685 2025-09-08T09:34:32,685 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T09:34:32,685 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-q105q8_a/hapflk_0252480c3b9444b18e4cb98d743abf7f/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-5qy11ba6[/] 2025-09-08T09:34:32,685 [bold magenta]cwd[/]: /tmp/pip-wheel-q105q8_a/hapflk_0252480c3b9444b18e4cb98d743abf7f/ 2025-09-08T09:34:32,685 Building wheel for hapflk (setup.py): finished with status 'error' 2025-09-08T09:34:32,686 ERROR: Failed building wheel for hapflk 2025-09-08T09:34:32,686 Running setup.py clean for hapflk 2025-09-08T09:34:32,687 Running command python setup.py clean 2025-09-08T09:34:33,956 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:34:33,956 !! 2025-09-08T09:34:33,957 ******************************************************************************** 2025-09-08T09:34:33,957 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:34:33,957 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:34:33,957 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:34:33,957 ******************************************************************************** 2025-09-08T09:34:33,957 !! 2025-09-08T09:34:33,957 self._finalize_license_expression() 2025-09-08T09:34:34,032 running clean 2025-09-08T09:34:34,177 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:34:34,177 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:34:34,178 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T09:34:34,178 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T09:34:34,178 removing 'build' 2025-09-08T09:34:34,313 Failed to build hapflk 2025-09-08T09:34:34,314 ERROR: Failed to build one or more wheels 2025-09-08T09:34:34,315 Exception information: 2025-09-08T09:34:34,315 Traceback (most recent call last): 2025-09-08T09:34:34,315 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T09:34:34,315 status = _inner_run() 2025-09-08T09:34:34,315 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T09:34:34,315 return self.run(options, args) 2025-09-08T09:34:34,315 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T09:34:34,315 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T09:34:34,315 return func(self, options, args) 2025-09-08T09:34:34,315 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T09:34:34,315 raise CommandError("Failed to build one or more wheels") 2025-09-08T09:34:34,315 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T09:34:34,319 Removed build tracker: '/tmp/pip-build-tracker-ihuey_km'