2025-09-08T09:34:33,141 Created temporary directory: /tmp/pip-build-tracker-l7stjyvx 2025-09-08T09:34:33,141 Initialized build tracking at /tmp/pip-build-tracker-l7stjyvx 2025-09-08T09:34:33,142 Created build tracker: /tmp/pip-build-tracker-l7stjyvx 2025-09-08T09:34:33,142 Entered build tracker: /tmp/pip-build-tracker-l7stjyvx 2025-09-08T09:34:33,142 Created temporary directory: /tmp/pip-wheel-za0c0f6i 2025-09-08T09:34:33,146 Created temporary directory: /tmp/pip-ephem-wheel-cache-xe9y5i8k 2025-09-08T09:34:33,211 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T09:34:33,214 2 location(s) to search for versions of hapflk: 2025-09-08T09:34:33,214 * https://pypi.org/simple/hapflk/ 2025-09-08T09:34:33,214 * https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:34:33,214 Fetching project page and analyzing links: https://pypi.org/simple/hapflk/ 2025-09-08T09:34:33,215 Getting page https://pypi.org/simple/hapflk/ 2025-09-08T09:34:33,216 Found index url https://pypi.org/simple/ 2025-09-08T09:34:33,298 Fetched page https://pypi.org/simple/hapflk/ as application/vnd.pypi.simple.v1+json 2025-09-08T09:34:33,301 Found link https://files.pythonhosted.org/packages/b2/ad/85999140cbc66853d701f214fd6548aab07dc46fe29c2d8632c332e97689/hapflk-1.3.2.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.2 2025-09-08T09:34:33,301 Found link https://files.pythonhosted.org/packages/ca/fa/51a8f51e01fbc13e8f4b36acbdb6d31188481f4c1ce440b8797ec769d910/hapflk-1.3.3.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.3 2025-09-08T09:34:33,301 Found link https://files.pythonhosted.org/packages/63/d9/33d91f8a3376ab13ffc0a102caa32a2332fccda2db96009f7cf317593e1b/hapflk-1.3.4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.4 2025-09-08T09:34:33,302 Found link https://files.pythonhosted.org/packages/65/21/a92bba282c49dcacbdb002ed60a7a9b2bddfb98f7eedc382a3d0c134abe7/hapflk-1.3.5.dev0.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev0 2025-09-08T09:34:33,302 Found link https://files.pythonhosted.org/packages/6b/81/cc8f04f774e8728b5167bc58ae12eb4fb2125b784a395fdfefb3e78f7733/hapflk-1.3.5.dev1.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev1 2025-09-08T09:34:33,302 Found link https://files.pythonhosted.org/packages/f8/34/1bd9c49ea13e6be4afec643acfe9f960ae6714fea4d5499a75988e81663e/hapflk-1.3.5.dev2.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev2 2025-09-08T09:34:33,303 Found link https://files.pythonhosted.org/packages/96/14/256f0eda9b570de3b48a7fcff1d062ab7694bd32e7f2ad7ef8bd483b926f/hapflk-1.3.5.dev3.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev3 2025-09-08T09:34:33,303 Found link https://files.pythonhosted.org/packages/aa/c6/c72917e6d4492061b47104c7922b0368c38be20b87bf3e0553d8824a9cfe/hapflk-1.3.5.dev4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev4 2025-09-08T09:34:33,303 Found link https://files.pythonhosted.org/packages/a4/96/4b534230ad9ea961235c5841bde1054bacbb574f88fe19324a776d4b0992/hapflk-1.3.5.dev5.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev5 2025-09-08T09:34:33,304 Found link https://files.pythonhosted.org/packages/5c/f9/f5bd0ea0712da4d11795fda5b40c44be0421a85d6b05f8e9687ce30b8089/hapflk-1.3.5.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5 2025-09-08T09:34:33,304 Found link https://files.pythonhosted.org/packages/51/c4/ed7b823aa136185d750d60f53268cfb6804dcc87183dbe216135e63aa583/hapflk-1.4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.4 2025-09-08T09:34:33,304 Found link https://files.pythonhosted.org/packages/c6/a6/ed1b0c03bdb79de6f288c5e982af3afcaae7a26cdd00ff75dd98bf81a13e/hapflk-2.0.dev0.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev0 2025-09-08T09:34:33,305 Found link https://files.pythonhosted.org/packages/30/60/1dab8e6a54e7ef2c19a62114527d5512da17a09a590d5551610b2fce8195/hapflk-2.0.dev1.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev1 2025-09-08T09:34:33,305 Found link https://files.pythonhosted.org/packages/89/5d/fa3af0a5d868d5154d1516696a317c13bcb686706143ec2052f789e17017/hapflk-2.0.dev2.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev2 2025-09-08T09:34:33,305 Skipping link: No binaries permitted for hapflk: https://files.pythonhosted.org/packages/17/3e/be1a90cc099e9ab4e2031be8539dad16495f9fc61f72424cee5dd0260f08/hapflk-2.1-py3-none-any.whl (from https://pypi.org/simple/hapflk/) (requires-python:>=3.8) 2025-09-08T09:34:33,306 Found link https://files.pythonhosted.org/packages/6c/ea/807cf8f36f1af15848db5264d8af4a260c081525943a932d69a81543ca8e/hapflk-2.1.tar.gz (from https://pypi.org/simple/hapflk/) (requires-python:>=3.8), version: 2.1 2025-09-08T09:34:33,307 Fetching project page and analyzing links: https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:34:33,307 Getting page https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:34:33,308 Found index url https://www.piwheels.org/simple/ 2025-09-08T09:34:33,411 Fetched page https://www.piwheels.org/simple/hapflk/ as text/html 2025-09-08T09:34:33,418 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-2.1-py3-none-any.whl#sha256=12ca832837ecb12292516fbb6ab0aff875d2be9a41f09362808a6973e3b3114e (from https://www.piwheels.org/simple/hapflk/) (requires-python:>=3.8) 2025-09-08T09:34:33,418 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp35-cp35m-linux_armv6l.whl#sha256=f7038eca9bba9d085b3b2ba6c6cba6778b3767a641d8c77b4a6770167d4d322d (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,419 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp35-cp35m-linux_armv7l.whl#sha256=f7038eca9bba9d085b3b2ba6c6cba6778b3767a641d8c77b4a6770167d4d322d (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,419 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp34-cp34m-linux_armv7l.whl#sha256=fb3798d9a4c7b3e2fb4b977a8d6dc3ae44b4cb0102ca67167d58182da2bdce0b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,419 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp35-cp35m-linux_armv6l.whl#sha256=73ecd00dcf029388178f31b3cbf3c04cbb264f752a6d05214bd6df8db316df6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,419 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp35-cp35m-linux_armv7l.whl#sha256=73ecd00dcf029388178f31b3cbf3c04cbb264f752a6d05214bd6df8db316df6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,419 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp34-cp34m-linux_armv7l.whl#sha256=5a64b9b9dae78e36eca456a2e9709b21d7a7bdb908a3d47e2b6529e1a5a64d1b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,419 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp34-cp34m-linux_armv7l.whl#sha256=fc973aad2b2ab1f031c8f17bd84b9707d283a7ce888fd944c7af2b0a925a4deb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,420 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp35-cp35m-linux_armv7l.whl#sha256=2801d5ffbdc9b9fcbf8e6cce77a1514b01ca28f562e550bfd093296db4ef9a95 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,420 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp35-cp35m-linux_armv6l.whl#sha256=2801d5ffbdc9b9fcbf8e6cce77a1514b01ca28f562e550bfd093296db4ef9a95 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,420 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp35-cp35m-linux_armv6l.whl#sha256=36fb4c6462ef30dda62684182251105eb2c822311065fd8ecd3b8a50f71ff244 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,420 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp35-cp35m-linux_armv7l.whl#sha256=36fb4c6462ef30dda62684182251105eb2c822311065fd8ecd3b8a50f71ff244 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,420 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp34-cp34m-linux_armv7l.whl#sha256=ba9a150f4c149df5b850e3dd31a6b7c442c50be76885355dc4a61611769ea367 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,420 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp34-cp34m-linux_armv7l.whl#sha256=12a3afe8bcb1936f5e30f374a25c6c3ad3f95ae5f59debcd89d3411d54899c86 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,421 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp35-cp35m-linux_armv7l.whl#sha256=e102a09db17e00ce4674077242b8abe77b140ccbc28084bc872a84f6a1f5dab0 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,421 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp35-cp35m-linux_armv6l.whl#sha256=e102a09db17e00ce4674077242b8abe77b140ccbc28084bc872a84f6a1f5dab0 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,421 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp34-cp34m-linux_armv7l.whl#sha256=12bd84214f6f58f4c6f555ae0634e7113ce57a3acdd1f6d868c9e7af24fa02b9 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,421 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp35-cp35m-linux_armv7l.whl#sha256=85ee36207b1cd90230358cc0a26778bda8e49013f9d5f7c8ceb5cea13e0dc6c1 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,421 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp35-cp35m-linux_armv6l.whl#sha256=85ee36207b1cd90230358cc0a26778bda8e49013f9d5f7c8ceb5cea13e0dc6c1 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,421 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp34-cp34m-linux_armv7l.whl#sha256=bab3585f6d546ed89812d88ba4d53169fec7ed73ea4998b71ff15b044cac28fb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,422 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp35-cp35m-linux_armv6l.whl#sha256=35e24788097f96d5805a7deb3fb82097bd48e535242bc017451a29d7b7330b64 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,422 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp35-cp35m-linux_armv7l.whl#sha256=35e24788097f96d5805a7deb3fb82097bd48e535242bc017451a29d7b7330b64 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,422 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp34-cp34m-linux_armv7l.whl#sha256=7bc675908db24bc875711def8f5103a4072f0708f3aa25e4947ca14666b6175b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,422 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp35-cp35m-linux_armv6l.whl#sha256=b3c6463a3333cb6d9246c27e81417b47bf70e14044a9c20fe9f11bed9b674215 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,422 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp35-cp35m-linux_armv7l.whl#sha256=b3c6463a3333cb6d9246c27e81417b47bf70e14044a9c20fe9f11bed9b674215 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,422 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp35-cp35m-linux_armv7l.whl#sha256=800b7833e4834c2b1376c8720f91d0a268d68f015607f79809e1ee7029ef2037 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,423 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp35-cp35m-linux_armv6l.whl#sha256=800b7833e4834c2b1376c8720f91d0a268d68f015607f79809e1ee7029ef2037 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,423 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp34-cp34m-linux_armv7l.whl#sha256=90f903ac669e6630c734222d9d32160aba9bcc7bccfa461f13f96d6003c1c935 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,423 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp35-cp35m-linux_armv7l.whl#sha256=b75ac5587497663f5dc6408cb449fac164d073dc6484492b692955d58e16cf6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,423 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp35-cp35m-linux_armv6l.whl#sha256=b75ac5587497663f5dc6408cb449fac164d073dc6484492b692955d58e16cf6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,423 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp34-cp34m-linux_armv7l.whl#sha256=4f02cb00f9b7473476979a98ce9531d641cf13cc2bc2b300a8d9c3d64d8deceb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:34:33,424 Skipping link: not a file: https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:34:33,424 Skipping link: not a file: https://pypi.org/simple/hapflk/ 2025-09-08T09:34:33,452 Given no hashes to check 1 links for project 'hapflk': discarding no candidates 2025-09-08T09:34:33,454 Collecting hapflk==1.3.5.dev3 2025-09-08T09:34:33,455 Created temporary directory: /tmp/pip-unpack-8fa_lhr_ 2025-09-08T09:34:33,603 Downloading hapflk-1.3.5.dev3.tar.gz (277 kB) 2025-09-08T09:34:33,703 Added hapflk==1.3.5.dev3 from https://files.pythonhosted.org/packages/96/14/256f0eda9b570de3b48a7fcff1d062ab7694bd32e7f2ad7ef8bd483b926f/hapflk-1.3.5.dev3.tar.gz to build tracker '/tmp/pip-build-tracker-l7stjyvx' 2025-09-08T09:34:33,704 Running setup.py (path:/tmp/pip-wheel-za0c0f6i/hapflk_c0d6b16c32e041cd8960b751e1647604/setup.py) egg_info for package hapflk 2025-09-08T09:34:33,705 Created temporary directory: /tmp/pip-pip-egg-info-iw8szfh8 2025-09-08T09:34:33,705 Preparing metadata (setup.py): started 2025-09-08T09:34:33,706 Running command python setup.py egg_info 2025-09-08T09:34:35,289 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '1.3.5-dev3' to '1.3.5.dev3' 2025-09-08T09:34:35,289 self.metadata.version = self._normalize_version(self.metadata.version) 2025-09-08T09:34:35,291 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:34:35,292 !! 2025-09-08T09:34:35,292 ******************************************************************************** 2025-09-08T09:34:35,292 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:34:35,292 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:34:35,292 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:34:35,293 ******************************************************************************** 2025-09-08T09:34:35,293 !! 2025-09-08T09:34:35,293 self._finalize_license_expression() 2025-09-08T09:34:35,380 running egg_info 2025-09-08T09:34:35,470 creating /tmp/pip-pip-egg-info-iw8szfh8/hapflk.egg-info 2025-09-08T09:34:35,471 writing /tmp/pip-pip-egg-info-iw8szfh8/hapflk.egg-info/PKG-INFO 2025-09-08T09:34:35,472 writing dependency_links to /tmp/pip-pip-egg-info-iw8szfh8/hapflk.egg-info/dependency_links.txt 2025-09-08T09:34:35,473 writing top-level names to /tmp/pip-pip-egg-info-iw8szfh8/hapflk.egg-info/top_level.txt 2025-09-08T09:34:35,473 writing manifest file '/tmp/pip-pip-egg-info-iw8szfh8/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:34:35,917 reading manifest file '/tmp/pip-pip-egg-info-iw8szfh8/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:34:35,918 reading manifest template 'MANIFEST.in' 2025-09-08T09:34:35,920 adding license file 'LICENSE.txt' 2025-09-08T09:34:35,920 adding license file 'COPYING.txt' 2025-09-08T09:34:35,922 writing manifest file '/tmp/pip-pip-egg-info-iw8szfh8/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:34:36,080 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T09:34:36,085 Source in /tmp/pip-wheel-za0c0f6i/hapflk_c0d6b16c32e041cd8960b751e1647604 has version 1.3.5.dev3, which satisfies requirement hapflk==1.3.5.dev3 from https://files.pythonhosted.org/packages/96/14/256f0eda9b570de3b48a7fcff1d062ab7694bd32e7f2ad7ef8bd483b926f/hapflk-1.3.5.dev3.tar.gz 2025-09-08T09:34:36,085 Removed hapflk==1.3.5.dev3 from https://files.pythonhosted.org/packages/96/14/256f0eda9b570de3b48a7fcff1d062ab7694bd32e7f2ad7ef8bd483b926f/hapflk-1.3.5.dev3.tar.gz from build tracker '/tmp/pip-build-tracker-l7stjyvx' 2025-09-08T09:34:36,089 Created temporary directory: /tmp/pip-unpack-ym50z0to 2025-09-08T09:34:36,089 Created temporary directory: /tmp/pip-unpack-_of627it 2025-09-08T09:34:36,089 Building wheels for collected packages: hapflk 2025-09-08T09:34:36,091 Created temporary directory: /tmp/pip-wheel-fgumfujq 2025-09-08T09:34:36,091 DEPRECATION: Building 'hapflk' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'hapflk'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T09:34:36,093 Building wheel for hapflk (setup.py): started 2025-09-08T09:34:36,093 Destination directory: /tmp/pip-wheel-fgumfujq 2025-09-08T09:34:36,094 Running command python setup.py bdist_wheel 2025-09-08T09:34:37,480 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '1.3.5-dev3' to '1.3.5.dev3' 2025-09-08T09:34:37,480 self.metadata.version = self._normalize_version(self.metadata.version) 2025-09-08T09:34:37,482 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:34:37,482 !! 2025-09-08T09:34:37,482 ******************************************************************************** 2025-09-08T09:34:37,483 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:34:37,483 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:34:37,483 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:34:37,483 ******************************************************************************** 2025-09-08T09:34:37,483 !! 2025-09-08T09:34:37,483 self._finalize_license_expression() 2025-09-08T09:34:37,484 running bdist_wheel 2025-09-08T09:34:37,929 running build 2025-09-08T09:34:37,929 running build_py 2025-09-08T09:34:38,020 creating build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:34:38,021 copying fastphase/__init__.py -> build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:34:38,022 creating build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:38,022 copying hapflk/popgen.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:38,023 copying hapflk/InputOutput.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:38,024 copying hapflk/nj.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:38,025 copying hapflk/data.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:38,026 copying hapflk/__init__.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:34:38,028 running build_ext 2025-09-08T09:34:38,381 building 'fastphase.fastphaseCython' extension 2025-09-08T09:34:38,382 creating build/temp.linux-armv7l-cpython-313/fastphase 2025-09-08T09:34:38,382 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c fastphase/fastphaseCython.c -o build/temp.linux-armv7l-cpython-313/fastphase/fastphaseCython.o 2025-09-08T09:34:38,828 fastphase/fastphaseCython.c: In function ‘__Pyx_ListComp_Append’: 2025-09-08T09:34:38,829 fastphase/fastphaseCython.c:934:23: error: lvalue required as left operand of assignment 2025-09-08T09:34:38,829 934 | Py_SIZE(list) = len+1; 2025-09-08T09:34:38,829 | ^ 2025-09-08T09:34:38,830 fastphase/fastphaseCython.c: In function ‘__Pyx_PyList_Append’: 2025-09-08T09:34:38,831 fastphase/fastphaseCython.c:993:23: error: lvalue required as left operand of assignment 2025-09-08T09:34:38,831 993 | Py_SIZE(list) = len+1; 2025-09-08T09:34:38,831 | ^ 2025-09-08T09:34:38,937 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase___init__’: 2025-09-08T09:34:38,941 fastphase/fastphaseCython.c:4208:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:38,941 4208 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:34:38,941 | ^~ 2025-09-08T09:34:38,942 In file included from /usr/include/python3.13/Python.h:76, 2025-09-08T09:34:38,942 from fastphase/fastphaseCython.c:4: 2025-09-08T09:34:38,942 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:34:38,942 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:34:38,942 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:38,949 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase_4addHaplotype’: 2025-09-08T09:34:38,954 fastphase/fastphaseCython.c:4483:7: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:38,954 4483 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:34:38,954 | ^~ 2025-09-08T09:34:38,954 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:34:38,955 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:34:38,955 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:38,963 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase_6addGenotype’: 2025-09-08T09:34:38,968 fastphase/fastphaseCython.c:4769:7: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:38,968 4769 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:34:38,968 | ^~ 2025-09-08T09:34:38,969 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:34:38,969 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:34:38,969 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:40,248 fastphase/fastphaseCython.c: In function ‘__pyx_pf_5numpy_7ndarray___getbuffer__’: 2025-09-08T09:34:40,270 fastphase/fastphaseCython.c:13331:50: error: ‘NPY_C_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_C_CONTIGUOUS’? 2025-09-08T09:34:40,270 13331 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_C_CONTIGUOUS) != 0)) != 0); 2025-09-08T09:34:40,270 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,270 | PyBUF_C_CONTIGUOUS 2025-09-08T09:34:40,272 fastphase/fastphaseCython.c:13331:50: note: each undeclared identifier is reported only once for each function it appears in 2025-09-08T09:34:40,316 fastphase/fastphaseCython.c:13387:50: error: ‘NPY_F_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_F_CONTIGUOUS’? 2025-09-08T09:34:40,316 13387 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_F_CONTIGUOUS) != 0)) != 0); 2025-09-08T09:34:40,316 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,316 | PyBUF_F_CONTIGUOUS 2025-09-08T09:34:40,325 fastphase/fastphaseCython.c: In function ‘__pyx_f_5numpy__util_dtypestring’: 2025-09-08T09:34:40,341 fastphase/fastphaseCython.c:14453:29: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T09:34:40,341 14453 | if (unlikely(__pyx_v_descr->names == Py_None)) { 2025-09-08T09:34:40,341 | ^~ 2025-09-08T09:34:40,342 fastphase/fastphaseCython.c:434:43: note: in definition of macro ‘unlikely’ 2025-09-08T09:34:40,342 434 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T09:34:40,342 | ^ 2025-09-08T09:34:40,361 fastphase/fastphaseCython.c:14457:28: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T09:34:40,361 14457 | __pyx_t_1 = __pyx_v_descr->names; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; 2025-09-08T09:34:40,361 | ^~ 2025-09-08T09:34:40,381 fastphase/fastphaseCython.c:14476:31: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T09:34:40,382 14476 | if (unlikely(__pyx_v_descr->fields == Py_None)) { 2025-09-08T09:34:40,382 | ^~ 2025-09-08T09:34:40,382 fastphase/fastphaseCython.c:434:43: note: in definition of macro ‘unlikely’ 2025-09-08T09:34:40,382 434 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T09:34:40,382 | ^ 2025-09-08T09:34:40,402 fastphase/fastphaseCython.c:14480:51: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T09:34:40,402 14480 | __pyx_t_3 = __Pyx_PyDict_GetItem(__pyx_v_descr->fields, __pyx_v_childname); if (unlikely(__pyx_t_3 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; 2025-09-08T09:34:40,402 | ^~ 2025-09-08T09:34:40,437 fastphase/fastphaseCython.c:14685:79: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘elsize’ 2025-09-08T09:34:40,437 14685 | (__pyx_v_offset[__pyx_t_8]) = ((__pyx_v_offset[__pyx_t_8]) + __pyx_v_child->elsize); 2025-09-08T09:34:40,437 | ^~ 2025-09-08T09:34:40,488 fastphase/fastphaseCython.c: In function ‘__pyx_tp_dealloc_15fastphaseCython_fphParams’: 2025-09-08T09:34:40,506 fastphase/fastphaseCython.c:15335:75: error: implicit declaration of function ‘_PyGC_FINALIZED’ [-Wimplicit-function-declaration] 2025-09-08T09:34:40,506 15335 | if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { 2025-09-08T09:34:40,506 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:40,515 fastphase/fastphaseCython.c: In function ‘__Pyx_InitCachedConstants’: 2025-09-08T09:34:40,536 fastphase/fastphaseCython.c:15686:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:40,536 15686 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_init, 33, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,536 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,536 In file included from /usr/include/python3.13/Python.h:101: 2025-09-08T09:34:40,536 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,536 213 | PyCode_New( 2025-09-08T09:34:40,536 | ^~~~~~~~~~ 2025-09-08T09:34:40,558 fastphase/fastphaseCython.c:15686:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:40,558 15686 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_init, 33, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,558 | ^~ 2025-09-08T09:34:40,558 | | 2025-09-08T09:34:40,558 | int 2025-09-08T09:34:40,558 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,558 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,559 | ^~~~~ 2025-09-08T09:34:40,559 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:40,559 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,559 | ~~~~~~~~~~^ 2025-09-08T09:34:40,580 fastphase/fastphaseCython.c:15686:242: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:40,581 15686 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_init, 33, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,581 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,581 | | 2025-09-08T09:34:40,581 | PyObject * {aka struct _object *} 2025-09-08T09:34:40,581 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,581 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,581 | ^~~~ 2025-09-08T09:34:40,581 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:40,582 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,582 | ~~~~^ 2025-09-08T09:34:40,603 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:40,603 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,603 | ^~~~~~~~~~ 2025-09-08T09:34:40,603 fastphase/fastphaseCython.c:15686:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,603 15686 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_init, 33, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,603 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,604 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,604 213 | PyCode_New( 2025-09-08T09:34:40,604 | ^~~~~~~~~~ 2025-09-08T09:34:40,624 fastphase/fastphaseCython.c:15698:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:40,624 15698 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_initUpdate, 39, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,624 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,624 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,624 213 | PyCode_New( 2025-09-08T09:34:40,624 | ^~~~~~~~~~ 2025-09-08T09:34:40,644 fastphase/fastphaseCython.c:15698:244: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:40,645 15698 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_initUpdate, 39, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,645 | ^~ 2025-09-08T09:34:40,645 | | 2025-09-08T09:34:40,645 | int 2025-09-08T09:34:40,645 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,645 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,645 | ^~~~~ 2025-09-08T09:34:40,645 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:40,646 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,646 | ~~~~~~~~~~^ 2025-09-08T09:34:40,665 fastphase/fastphaseCython.c:15698:248: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:40,666 15698 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_initUpdate, 39, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,666 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,666 | | 2025-09-08T09:34:40,666 | PyObject * {aka struct _object *} 2025-09-08T09:34:40,666 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,666 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,666 | ^~~~ 2025-09-08T09:34:40,666 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:40,666 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,667 | ~~~~^ 2025-09-08T09:34:40,686 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:40,686 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,687 | ^~~~~~~~~~ 2025-09-08T09:34:40,687 fastphase/fastphaseCython.c:15698:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,687 15698 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_initUpdate, 39, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,687 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,687 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,687 213 | PyCode_New( 2025-09-08T09:34:40,687 | ^~~~~~~~~~ 2025-09-08T09:34:40,705 fastphase/fastphaseCython.c:15710:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:40,706 15710 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addIndivFit, 45, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 45; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,706 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,706 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,706 213 | PyCode_New( 2025-09-08T09:34:40,706 | ^~~~~~~~~~ 2025-09-08T09:34:40,726 fastphase/fastphaseCython.c:15710:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:40,726 15710 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addIndivFit, 45, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 45; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,727 | ^~ 2025-09-08T09:34:40,727 | | 2025-09-08T09:34:40,727 | int 2025-09-08T09:34:40,727 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,727 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,727 | ^~~~~ 2025-09-08T09:34:40,727 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:40,727 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,727 | ~~~~~~~~~~^ 2025-09-08T09:34:40,747 fastphase/fastphaseCython.c:15710:249: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:40,747 15710 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addIndivFit, 45, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 45; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,747 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,747 | | 2025-09-08T09:34:40,748 | PyObject * {aka struct _object *} 2025-09-08T09:34:40,748 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,748 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,748 | ^~~~ 2025-09-08T09:34:40,748 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:40,748 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,748 | ~~~~^ 2025-09-08T09:34:40,768 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:40,768 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,768 | ^~~~~~~~~~ 2025-09-08T09:34:40,768 fastphase/fastphaseCython.c:15710:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,768 15710 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addIndivFit, 45, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 45; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,769 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,769 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,769 213 | PyCode_New( 2025-09-08T09:34:40,769 | ^~~~~~~~~~ 2025-09-08T09:34:40,787 fastphase/fastphaseCython.c:15722:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:40,787 15722 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_update, 51, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,787 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,787 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,787 213 | PyCode_New( 2025-09-08T09:34:40,788 | ^~~~~~~~~~ 2025-09-08T09:34:40,808 fastphase/fastphaseCython.c:15722:240: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:40,808 15722 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_update, 51, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,808 | ^~ 2025-09-08T09:34:40,808 | | 2025-09-08T09:34:40,808 | int 2025-09-08T09:34:40,808 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,808 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,809 | ^~~~~ 2025-09-08T09:34:40,809 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:40,809 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,809 | ~~~~~~~~~~^ 2025-09-08T09:34:40,829 fastphase/fastphaseCython.c:15722:244: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:40,829 15722 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_update, 51, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,829 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,829 | | 2025-09-08T09:34:40,829 | PyObject * {aka struct _object *} 2025-09-08T09:34:40,829 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,829 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,829 | ^~~~ 2025-09-08T09:34:40,830 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:40,830 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,830 | ~~~~^ 2025-09-08T09:34:40,849 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:40,850 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,850 | ^~~~~~~~~~ 2025-09-08T09:34:40,850 fastphase/fastphaseCython.c:15722:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,850 15722 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_update, 51, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,850 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,850 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,850 213 | PyCode_New( 2025-09-08T09:34:40,850 | ^~~~~~~~~~ 2025-09-08T09:34:40,868 fastphase/fastphaseCython.c:15734:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:40,869 15734 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_write, 76, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 76; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,869 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,869 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,869 213 | PyCode_New( 2025-09-08T09:34:40,869 | ^~~~~~~~~~ 2025-09-08T09:34:40,889 fastphase/fastphaseCython.c:15734:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:40,889 15734 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_write, 76, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 76; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,890 | ^~ 2025-09-08T09:34:40,890 | | 2025-09-08T09:34:40,890 | int 2025-09-08T09:34:40,890 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,890 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,890 | ^~~~~ 2025-09-08T09:34:40,890 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:40,890 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,890 | ~~~~~~~~~~^ 2025-09-08T09:34:40,910 fastphase/fastphaseCython.c:15734:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:40,910 15734 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_write, 76, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 76; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,911 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,911 | | 2025-09-08T09:34:40,911 | PyObject * {aka struct _object *} 2025-09-08T09:34:40,911 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,911 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,911 | ^~~~ 2025-09-08T09:34:40,911 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:40,911 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,911 | ~~~~^ 2025-09-08T09:34:40,931 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:40,931 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,931 | ^~~~~~~~~~ 2025-09-08T09:34:40,932 fastphase/fastphaseCython.c:15734:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,932 15734 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_write, 76, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 76; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,932 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,932 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,932 213 | PyCode_New( 2025-09-08T09:34:40,932 | ^~~~~~~~~~ 2025-09-08T09:34:40,950 fastphase/fastphaseCython.c:15746:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:40,950 15746 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_init, 92, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,951 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,951 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:40,951 213 | PyCode_New( 2025-09-08T09:34:40,951 | ^~~~~~~~~~ 2025-09-08T09:34:40,971 fastphase/fastphaseCython.c:15746:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:40,971 15746 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_init, 92, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,971 | ^~ 2025-09-08T09:34:40,971 | | 2025-09-08T09:34:40,972 | int 2025-09-08T09:34:40,972 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,972 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,972 | ^~~~~ 2025-09-08T09:34:40,972 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:40,972 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,972 | ~~~~~~~~~~^ 2025-09-08T09:34:40,992 fastphase/fastphaseCython.c:15746:242: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:40,992 15746 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_init, 92, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:40,992 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:40,992 | | 2025-09-08T09:34:40,993 | PyObject * {aka struct _object *} 2025-09-08T09:34:40,993 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:40,993 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:40,993 | ^~~~ 2025-09-08T09:34:40,993 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:40,993 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:40,993 | ~~~~^ 2025-09-08T09:34:41,013 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:41,013 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,013 | ^~~~~~~~~~ 2025-09-08T09:34:41,013 fastphase/fastphaseCython.c:15746:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,013 15746 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_init, 92, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,014 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,014 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,014 213 | PyCode_New( 2025-09-08T09:34:41,014 | ^~~~~~~~~~ 2025-09-08T09:34:41,032 fastphase/fastphaseCython.c:15758:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:41,032 15758 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_flush, 97, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 97; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,032 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,032 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,033 213 | PyCode_New( 2025-09-08T09:34:41,033 | ^~~~~~~~~~ 2025-09-08T09:34:41,053 fastphase/fastphaseCython.c:15758:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:41,053 15758 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_flush, 97, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 97; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,053 | ^~ 2025-09-08T09:34:41,053 | | 2025-09-08T09:34:41,053 | int 2025-09-08T09:34:41,053 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,054 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,054 | ^~~~~ 2025-09-08T09:34:41,054 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:41,054 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,054 | ~~~~~~~~~~^ 2025-09-08T09:34:41,074 fastphase/fastphaseCython.c:15758:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:41,074 15758 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_flush, 97, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 97; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,074 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,074 | | 2025-09-08T09:34:41,074 | PyObject * {aka struct _object *} 2025-09-08T09:34:41,074 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,075 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,075 | ^~~~ 2025-09-08T09:34:41,075 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:41,075 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,075 | ~~~~^ 2025-09-08T09:34:41,095 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:41,095 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,095 | ^~~~~~~~~~ 2025-09-08T09:34:41,095 fastphase/fastphaseCython.c:15758:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,095 15758 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_flush, 97, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 97; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,095 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,095 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,096 213 | PyCode_New( 2025-09-08T09:34:41,096 | ^~~~~~~~~~ 2025-09-08T09:34:41,114 fastphase/fastphaseCython.c:15770:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:41,114 15770 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addHaplotype, 103, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 103; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,114 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,114 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,114 213 | PyCode_New( 2025-09-08T09:34:41,114 | ^~~~~~~~~~ 2025-09-08T09:34:41,135 fastphase/fastphaseCython.c:15770:246: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:41,135 15770 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addHaplotype, 103, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 103; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,135 | ^~~ 2025-09-08T09:34:41,135 | | 2025-09-08T09:34:41,135 | int 2025-09-08T09:34:41,135 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,135 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,136 | ^~~~~ 2025-09-08T09:34:41,136 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:41,136 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,136 | ~~~~~~~~~~^ 2025-09-08T09:34:41,156 fastphase/fastphaseCython.c:15770:251: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:41,156 15770 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addHaplotype, 103, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 103; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,156 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,156 | | 2025-09-08T09:34:41,156 | PyObject * {aka struct _object *} 2025-09-08T09:34:41,156 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,156 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,156 | ^~~~ 2025-09-08T09:34:41,157 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:41,157 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,157 | ~~~~^ 2025-09-08T09:34:41,177 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:41,177 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,177 | ^~~~~~~~~~ 2025-09-08T09:34:41,177 fastphase/fastphaseCython.c:15770:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,177 15770 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addHaplotype, 103, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 103; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,177 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,177 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,178 213 | PyCode_New( 2025-09-08T09:34:41,178 | ^~~~~~~~~~ 2025-09-08T09:34:41,196 fastphase/fastphaseCython.c:15785:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:41,196 15785 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addGenotype, 115, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 115; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,196 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,196 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,196 213 | PyCode_New( 2025-09-08T09:34:41,197 | ^~~~~~~~~~ 2025-09-08T09:34:41,217 fastphase/fastphaseCython.c:15785:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:41,217 15785 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addGenotype, 115, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 115; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,217 | ^~~ 2025-09-08T09:34:41,217 | | 2025-09-08T09:34:41,217 | int 2025-09-08T09:34:41,217 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,218 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,218 | ^~~~~ 2025-09-08T09:34:41,218 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:41,218 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,218 | ~~~~~~~~~~^ 2025-09-08T09:34:41,238 fastphase/fastphaseCython.c:15785:250: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:41,238 15785 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addGenotype, 115, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 115; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,238 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,238 | | 2025-09-08T09:34:41,238 | PyObject * {aka struct _object *} 2025-09-08T09:34:41,238 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,239 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,239 | ^~~~ 2025-09-08T09:34:41,239 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:41,239 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,239 | ~~~~^ 2025-09-08T09:34:41,259 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:41,259 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,259 | ^~~~~~~~~~ 2025-09-08T09:34:41,259 fastphase/fastphaseCython.c:15785:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,259 15785 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_addGenotype, 115, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 115; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,259 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,260 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,260 213 | PyCode_New( 2025-09-08T09:34:41,260 | ^~~~~~~~~~ 2025-09-08T09:34:41,278 fastphase/fastphaseCython.c:15800:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:41,278 15800 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_fit, 127, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 127; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,278 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,279 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,279 213 | PyCode_New( 2025-09-08T09:34:41,279 | ^~~~~~~~~~ 2025-09-08T09:34:41,299 fastphase/fastphaseCython.c:15800:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:41,299 15800 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_fit, 127, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 127; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,300 | ^~~ 2025-09-08T09:34:41,300 | | 2025-09-08T09:34:41,300 | int 2025-09-08T09:34:41,300 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,300 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,300 | ^~~~~ 2025-09-08T09:34:41,300 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:41,300 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,300 | ~~~~~~~~~~^ 2025-09-08T09:34:41,320 fastphase/fastphaseCython.c:15800:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:41,320 15800 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_fit, 127, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 127; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,321 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,321 | | 2025-09-08T09:34:41,321 | PyObject * {aka struct _object *} 2025-09-08T09:34:41,321 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,321 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,321 | ^~~~ 2025-09-08T09:34:41,321 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:41,321 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,321 | ~~~~^ 2025-09-08T09:34:41,341 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:41,341 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,342 | ^~~~~~~~~~ 2025-09-08T09:34:41,342 fastphase/fastphaseCython.c:15800:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,342 15800 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_fit, 127, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 127; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,342 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,342 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,342 213 | PyCode_New( 2025-09-08T09:34:41,342 | ^~~~~~~~~~ 2025-09-08T09:34:41,361 fastphase/fastphaseCython.c:15815:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:34:41,361 15815 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_impute, 179, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 179; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,361 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,361 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,361 213 | PyCode_New( 2025-09-08T09:34:41,361 | ^~~~~~~~~~ 2025-09-08T09:34:41,382 fastphase/fastphaseCython.c:15815:241: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:34:41,382 15815 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_impute, 179, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 179; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,382 | ^~~ 2025-09-08T09:34:41,382 | | 2025-09-08T09:34:41,382 | int 2025-09-08T09:34:41,382 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,383 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,383 | ^~~~~ 2025-09-08T09:34:41,383 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:34:41,383 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,383 | ~~~~~~~~~~^ 2025-09-08T09:34:41,403 fastphase/fastphaseCython.c:15815:246: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:34:41,403 15815 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_impute, 179, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 179; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,403 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,403 | | 2025-09-08T09:34:41,403 | PyObject * {aka struct _object *} 2025-09-08T09:34:41,404 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,404 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,404 | ^~~~ 2025-09-08T09:34:41,404 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:34:41,404 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:34:41,404 | ~~~~^ 2025-09-08T09:34:41,424 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:34:41,424 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:34:41,424 | ^~~~~~~~~~ 2025-09-08T09:34:41,424 fastphase/fastphaseCython.c:15815:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:34:41,424 15815 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_bservin_Network_marcel_hom, __pyx_n_s_impute, 179, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 179; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:34:41,425 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,425 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:34:41,425 213 | PyCode_New( 2025-09-08T09:34:41,425 | ^~~~~~~~~~ 2025-09-08T09:34:41,429 fastphase/fastphaseCython.c: In function ‘PyInit_fastphaseCython’: 2025-09-08T09:34:41,448 fastphase/fastphaseCython.c:15936:41: error: ‘PyTypeObject’ {aka ‘struct _typeobject’} has no member named ‘tp_print’ 2025-09-08T09:34:41,448 15936 | __pyx_type_15fastphaseCython_fphParams.tp_print = 0; 2025-09-08T09:34:41,448 | ^ 2025-09-08T09:34:41,486 fastphase/fastphaseCython.c: In function ‘__Pyx_ParseOptionalKeywords’: 2025-09-08T09:34:41,514 fastphase/fastphaseCython.c:16343:22: error: implicit declaration of function ‘PyUnicode_GET_SIZE’; did you mean ‘PyDict_GET_SIZE’? [-Wimplicit-function-declaration] 2025-09-08T09:34:41,515 16343 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2025-09-08T09:34:41,515 | ^~~~~~~~~~~~~~~~~~ 2025-09-08T09:34:41,515 | PyDict_GET_SIZE 2025-09-08T09:34:41,534 fastphase/fastphaseCython.c: At top level: 2025-09-08T09:34:41,554 fastphase/fastphaseCython.c:16397:12: fatal error: longintrepr.h: No such file or directory 2025-09-08T09:34:41,554 16397 | #include "longintrepr.h" 2025-09-08T09:34:41,554 | ^~~~~~~~~~~~~~~ 2025-09-08T09:34:41,554 compilation terminated. 2025-09-08T09:34:41,560 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-08T09:34:41,755 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T09:34:41,769 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T09:34:41,769 exec(compile('"'"''"'"''"'"' 2025-09-08T09:34:41,769 # This is -- a caller that pip uses to run setup.py 2025-09-08T09:34:41,769 # 2025-09-08T09:34:41,769 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T09:34:41,769 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T09:34:41,769 # - It provides a clear error message when setuptools is not installed. 2025-09-08T09:34:41,769 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T09:34:41,769 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T09:34:41,769 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T09:34:41,769 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T09:34:41,769 import os, sys, tokenize, traceback 2025-09-08T09:34:41,769 2025-09-08T09:34:41,769 try: 2025-09-08T09:34:41,769 import setuptools 2025-09-08T09:34:41,769 except ImportError: 2025-09-08T09:34:41,769 print( 2025-09-08T09:34:41,769 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T09:34:41,769 "the build environment with exception:", 2025-09-08T09:34:41,769 file=sys.stderr, 2025-09-08T09:34:41,769 ) 2025-09-08T09:34:41,769 traceback.print_exc() 2025-09-08T09:34:41,769 sys.exit(1) 2025-09-08T09:34:41,769 2025-09-08T09:34:41,769 __file__ = %r 2025-09-08T09:34:41,769 sys.argv[0] = __file__ 2025-09-08T09:34:41,769 2025-09-08T09:34:41,769 if os.path.exists(__file__): 2025-09-08T09:34:41,769 filename = __file__ 2025-09-08T09:34:41,769 with tokenize.open(__file__) as f: 2025-09-08T09:34:41,769 setup_py_code = f.read() 2025-09-08T09:34:41,769 else: 2025-09-08T09:34:41,769 filename = "" 2025-09-08T09:34:41,769 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T09:34:41,769 2025-09-08T09:34:41,769 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T09:34:41,769 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-za0c0f6i/hapflk_c0d6b16c32e041cd8960b751e1647604/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-fgumfujq[/] 2025-09-08T09:34:41,769 [bold magenta]cwd[/]: /tmp/pip-wheel-za0c0f6i/hapflk_c0d6b16c32e041cd8960b751e1647604/ 2025-09-08T09:34:41,769 Building wheel for hapflk (setup.py): finished with status 'error' 2025-09-08T09:34:41,770 ERROR: Failed building wheel for hapflk 2025-09-08T09:34:41,771 Running setup.py clean for hapflk 2025-09-08T09:34:41,772 Running command python setup.py clean 2025-09-08T09:34:43,166 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:332: InformationOnly: Normalizing '1.3.5-dev3' to '1.3.5.dev3' 2025-09-08T09:34:43,166 self.metadata.version = self._normalize_version(self.metadata.version) 2025-09-08T09:34:43,168 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:34:43,168 !! 2025-09-08T09:34:43,169 ******************************************************************************** 2025-09-08T09:34:43,169 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:34:43,169 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:34:43,169 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:34:43,169 ******************************************************************************** 2025-09-08T09:34:43,169 !! 2025-09-08T09:34:43,169 self._finalize_license_expression() 2025-09-08T09:34:43,254 running clean 2025-09-08T09:34:43,424 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:34:43,424 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:34:43,425 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T09:34:43,425 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T09:34:43,425 removing 'build' 2025-09-08T09:34:43,580 Failed to build hapflk 2025-09-08T09:34:43,581 ERROR: Failed to build one or more wheels 2025-09-08T09:34:43,582 Exception information: 2025-09-08T09:34:43,582 Traceback (most recent call last): 2025-09-08T09:34:43,582 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T09:34:43,582 status = _inner_run() 2025-09-08T09:34:43,582 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T09:34:43,582 return self.run(options, args) 2025-09-08T09:34:43,582 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T09:34:43,582 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T09:34:43,582 return func(self, options, args) 2025-09-08T09:34:43,582 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T09:34:43,582 raise CommandError("Failed to build one or more wheels") 2025-09-08T09:34:43,582 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T09:34:43,587 Removed build tracker: '/tmp/pip-build-tracker-l7stjyvx'