2025-09-08T09:35:08,192 Created temporary directory: /tmp/pip-build-tracker-tfwzr0v2 2025-09-08T09:35:08,193 Initialized build tracking at /tmp/pip-build-tracker-tfwzr0v2 2025-09-08T09:35:08,193 Created build tracker: /tmp/pip-build-tracker-tfwzr0v2 2025-09-08T09:35:08,193 Entered build tracker: /tmp/pip-build-tracker-tfwzr0v2 2025-09-08T09:35:08,193 Created temporary directory: /tmp/pip-wheel-0a9ux5nz 2025-09-08T09:35:08,197 Created temporary directory: /tmp/pip-ephem-wheel-cache-nqdhrddl 2025-09-08T09:35:08,255 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T09:35:08,257 2 location(s) to search for versions of hapflk: 2025-09-08T09:35:08,257 * https://pypi.org/simple/hapflk/ 2025-09-08T09:35:08,257 * https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:35:08,258 Fetching project page and analyzing links: https://pypi.org/simple/hapflk/ 2025-09-08T09:35:08,258 Getting page https://pypi.org/simple/hapflk/ 2025-09-08T09:35:08,259 Found index url https://pypi.org/simple/ 2025-09-08T09:35:08,329 Fetched page https://pypi.org/simple/hapflk/ as application/vnd.pypi.simple.v1+json 2025-09-08T09:35:08,332 Found link https://files.pythonhosted.org/packages/b2/ad/85999140cbc66853d701f214fd6548aab07dc46fe29c2d8632c332e97689/hapflk-1.3.2.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.2 2025-09-08T09:35:08,332 Found link https://files.pythonhosted.org/packages/ca/fa/51a8f51e01fbc13e8f4b36acbdb6d31188481f4c1ce440b8797ec769d910/hapflk-1.3.3.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.3 2025-09-08T09:35:08,332 Found link https://files.pythonhosted.org/packages/63/d9/33d91f8a3376ab13ffc0a102caa32a2332fccda2db96009f7cf317593e1b/hapflk-1.3.4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.4 2025-09-08T09:35:08,332 Found link https://files.pythonhosted.org/packages/65/21/a92bba282c49dcacbdb002ed60a7a9b2bddfb98f7eedc382a3d0c134abe7/hapflk-1.3.5.dev0.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev0 2025-09-08T09:35:08,333 Found link https://files.pythonhosted.org/packages/6b/81/cc8f04f774e8728b5167bc58ae12eb4fb2125b784a395fdfefb3e78f7733/hapflk-1.3.5.dev1.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev1 2025-09-08T09:35:08,333 Found link https://files.pythonhosted.org/packages/f8/34/1bd9c49ea13e6be4afec643acfe9f960ae6714fea4d5499a75988e81663e/hapflk-1.3.5.dev2.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev2 2025-09-08T09:35:08,333 Found link https://files.pythonhosted.org/packages/96/14/256f0eda9b570de3b48a7fcff1d062ab7694bd32e7f2ad7ef8bd483b926f/hapflk-1.3.5.dev3.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev3 2025-09-08T09:35:08,333 Found link https://files.pythonhosted.org/packages/aa/c6/c72917e6d4492061b47104c7922b0368c38be20b87bf3e0553d8824a9cfe/hapflk-1.3.5.dev4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev4 2025-09-08T09:35:08,334 Found link https://files.pythonhosted.org/packages/a4/96/4b534230ad9ea961235c5841bde1054bacbb574f88fe19324a776d4b0992/hapflk-1.3.5.dev5.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5.dev5 2025-09-08T09:35:08,334 Found link https://files.pythonhosted.org/packages/5c/f9/f5bd0ea0712da4d11795fda5b40c44be0421a85d6b05f8e9687ce30b8089/hapflk-1.3.5.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.3.5 2025-09-08T09:35:08,334 Found link https://files.pythonhosted.org/packages/51/c4/ed7b823aa136185d750d60f53268cfb6804dcc87183dbe216135e63aa583/hapflk-1.4.tar.gz (from https://pypi.org/simple/hapflk/), version: 1.4 2025-09-08T09:35:08,334 Found link https://files.pythonhosted.org/packages/c6/a6/ed1b0c03bdb79de6f288c5e982af3afcaae7a26cdd00ff75dd98bf81a13e/hapflk-2.0.dev0.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev0 2025-09-08T09:35:08,335 Found link https://files.pythonhosted.org/packages/30/60/1dab8e6a54e7ef2c19a62114527d5512da17a09a590d5551610b2fce8195/hapflk-2.0.dev1.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev1 2025-09-08T09:35:08,335 Found link https://files.pythonhosted.org/packages/89/5d/fa3af0a5d868d5154d1516696a317c13bcb686706143ec2052f789e17017/hapflk-2.0.dev2.tar.gz (from https://pypi.org/simple/hapflk/), version: 2.0.dev2 2025-09-08T09:35:08,335 Skipping link: No binaries permitted for hapflk: https://files.pythonhosted.org/packages/17/3e/be1a90cc099e9ab4e2031be8539dad16495f9fc61f72424cee5dd0260f08/hapflk-2.1-py3-none-any.whl (from https://pypi.org/simple/hapflk/) (requires-python:>=3.8) 2025-09-08T09:35:08,336 Found link https://files.pythonhosted.org/packages/6c/ea/807cf8f36f1af15848db5264d8af4a260c081525943a932d69a81543ca8e/hapflk-2.1.tar.gz (from https://pypi.org/simple/hapflk/) (requires-python:>=3.8), version: 2.1 2025-09-08T09:35:08,336 Fetching project page and analyzing links: https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:35:08,336 Getting page https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:35:08,337 Found index url https://www.piwheels.org/simple/ 2025-09-08T09:35:08,426 Fetched page https://www.piwheels.org/simple/hapflk/ as text/html 2025-09-08T09:35:08,432 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-2.1-py3-none-any.whl#sha256=12ca832837ecb12292516fbb6ab0aff875d2be9a41f09362808a6973e3b3114e (from https://www.piwheels.org/simple/hapflk/) (requires-python:>=3.8) 2025-09-08T09:35:08,432 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp35-cp35m-linux_armv6l.whl#sha256=f7038eca9bba9d085b3b2ba6c6cba6778b3767a641d8c77b4a6770167d4d322d (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,432 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp35-cp35m-linux_armv7l.whl#sha256=f7038eca9bba9d085b3b2ba6c6cba6778b3767a641d8c77b4a6770167d4d322d (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,432 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.4-cp34-cp34m-linux_armv7l.whl#sha256=fb3798d9a4c7b3e2fb4b977a8d6dc3ae44b4cb0102ca67167d58182da2bdce0b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,433 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp35-cp35m-linux_armv6l.whl#sha256=73ecd00dcf029388178f31b3cbf3c04cbb264f752a6d05214bd6df8db316df6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,433 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp35-cp35m-linux_armv7l.whl#sha256=73ecd00dcf029388178f31b3cbf3c04cbb264f752a6d05214bd6df8db316df6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,433 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5-cp34-cp34m-linux_armv7l.whl#sha256=5a64b9b9dae78e36eca456a2e9709b21d7a7bdb908a3d47e2b6529e1a5a64d1b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,433 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp34-cp34m-linux_armv7l.whl#sha256=fc973aad2b2ab1f031c8f17bd84b9707d283a7ce888fd944c7af2b0a925a4deb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,433 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp35-cp35m-linux_armv7l.whl#sha256=2801d5ffbdc9b9fcbf8e6cce77a1514b01ca28f562e550bfd093296db4ef9a95 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,433 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev5-cp35-cp35m-linux_armv6l.whl#sha256=2801d5ffbdc9b9fcbf8e6cce77a1514b01ca28f562e550bfd093296db4ef9a95 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,433 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp35-cp35m-linux_armv6l.whl#sha256=36fb4c6462ef30dda62684182251105eb2c822311065fd8ecd3b8a50f71ff244 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,433 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp35-cp35m-linux_armv7l.whl#sha256=36fb4c6462ef30dda62684182251105eb2c822311065fd8ecd3b8a50f71ff244 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev4-cp34-cp34m-linux_armv7l.whl#sha256=ba9a150f4c149df5b850e3dd31a6b7c442c50be76885355dc4a61611769ea367 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp34-cp34m-linux_armv7l.whl#sha256=12a3afe8bcb1936f5e30f374a25c6c3ad3f95ae5f59debcd89d3411d54899c86 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp35-cp35m-linux_armv7l.whl#sha256=e102a09db17e00ce4674077242b8abe77b140ccbc28084bc872a84f6a1f5dab0 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev3-cp35-cp35m-linux_armv6l.whl#sha256=e102a09db17e00ce4674077242b8abe77b140ccbc28084bc872a84f6a1f5dab0 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp34-cp34m-linux_armv7l.whl#sha256=12bd84214f6f58f4c6f555ae0634e7113ce57a3acdd1f6d868c9e7af24fa02b9 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp35-cp35m-linux_armv7l.whl#sha256=85ee36207b1cd90230358cc0a26778bda8e49013f9d5f7c8ceb5cea13e0dc6c1 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev2-cp35-cp35m-linux_armv6l.whl#sha256=85ee36207b1cd90230358cc0a26778bda8e49013f9d5f7c8ceb5cea13e0dc6c1 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp34-cp34m-linux_armv7l.whl#sha256=bab3585f6d546ed89812d88ba4d53169fec7ed73ea4998b71ff15b044cac28fb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,434 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp35-cp35m-linux_armv6l.whl#sha256=35e24788097f96d5805a7deb3fb82097bd48e535242bc017451a29d7b7330b64 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,435 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev1-cp35-cp35m-linux_armv7l.whl#sha256=35e24788097f96d5805a7deb3fb82097bd48e535242bc017451a29d7b7330b64 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,435 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp34-cp34m-linux_armv7l.whl#sha256=7bc675908db24bc875711def8f5103a4072f0708f3aa25e4947ca14666b6175b (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,435 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp35-cp35m-linux_armv6l.whl#sha256=b3c6463a3333cb6d9246c27e81417b47bf70e14044a9c20fe9f11bed9b674215 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,435 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.5.dev0-cp35-cp35m-linux_armv7l.whl#sha256=b3c6463a3333cb6d9246c27e81417b47bf70e14044a9c20fe9f11bed9b674215 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,435 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp35-cp35m-linux_armv7l.whl#sha256=800b7833e4834c2b1376c8720f91d0a268d68f015607f79809e1ee7029ef2037 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,435 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp35-cp35m-linux_armv6l.whl#sha256=800b7833e4834c2b1376c8720f91d0a268d68f015607f79809e1ee7029ef2037 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,435 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.4-cp34-cp34m-linux_armv7l.whl#sha256=90f903ac669e6630c734222d9d32160aba9bcc7bccfa461f13f96d6003c1c935 (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,435 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp35-cp35m-linux_armv7l.whl#sha256=b75ac5587497663f5dc6408cb449fac164d073dc6484492b692955d58e16cf6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,436 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp35-cp35m-linux_armv6l.whl#sha256=b75ac5587497663f5dc6408cb449fac164d073dc6484492b692955d58e16cf6f (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,436 Skipping link: No binaries permitted for hapflk: https://archive1.piwheels.org/simple/hapflk/hapflk-1.3.3-cp34-cp34m-linux_armv7l.whl#sha256=4f02cb00f9b7473476979a98ce9531d641cf13cc2bc2b300a8d9c3d64d8deceb (from https://www.piwheels.org/simple/hapflk/) 2025-09-08T09:35:08,436 Skipping link: not a file: https://www.piwheels.org/simple/hapflk/ 2025-09-08T09:35:08,436 Skipping link: not a file: https://pypi.org/simple/hapflk/ 2025-09-08T09:35:08,459 Given no hashes to check 1 links for project 'hapflk': discarding no candidates 2025-09-08T09:35:08,460 Collecting hapflk==1.4 2025-09-08T09:35:08,462 Created temporary directory: /tmp/pip-unpack-mo152wuh 2025-09-08T09:35:08,603 Downloading hapflk-1.4.tar.gz (276 kB) 2025-09-08T09:35:08,698 Added hapflk==1.4 from https://files.pythonhosted.org/packages/51/c4/ed7b823aa136185d750d60f53268cfb6804dcc87183dbe216135e63aa583/hapflk-1.4.tar.gz to build tracker '/tmp/pip-build-tracker-tfwzr0v2' 2025-09-08T09:35:08,699 Running setup.py (path:/tmp/pip-wheel-0a9ux5nz/hapflk_da95353a49974071bf24317674ab4d3e/setup.py) egg_info for package hapflk 2025-09-08T09:35:08,700 Created temporary directory: /tmp/pip-pip-egg-info-ebvcy21n 2025-09-08T09:35:08,700 Preparing metadata (setup.py): started 2025-09-08T09:35:08,701 Running command python setup.py egg_info 2025-09-08T09:35:09,981 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:35:09,982 !! 2025-09-08T09:35:09,982 ******************************************************************************** 2025-09-08T09:35:09,982 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:35:09,982 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:35:09,982 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:35:09,982 ******************************************************************************** 2025-09-08T09:35:09,983 !! 2025-09-08T09:35:09,983 self._finalize_license_expression() 2025-09-08T09:35:10,055 running egg_info 2025-09-08T09:35:10,131 creating /tmp/pip-pip-egg-info-ebvcy21n/hapflk.egg-info 2025-09-08T09:35:10,131 writing /tmp/pip-pip-egg-info-ebvcy21n/hapflk.egg-info/PKG-INFO 2025-09-08T09:35:10,132 writing dependency_links to /tmp/pip-pip-egg-info-ebvcy21n/hapflk.egg-info/dependency_links.txt 2025-09-08T09:35:10,133 writing top-level names to /tmp/pip-pip-egg-info-ebvcy21n/hapflk.egg-info/top_level.txt 2025-09-08T09:35:10,133 writing manifest file '/tmp/pip-pip-egg-info-ebvcy21n/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:35:10,508 reading manifest file '/tmp/pip-pip-egg-info-ebvcy21n/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:35:10,508 reading manifest template 'MANIFEST.in' 2025-09-08T09:35:10,510 adding license file 'LICENSE.txt' 2025-09-08T09:35:10,510 adding license file 'COPYING.txt' 2025-09-08T09:35:10,513 writing manifest file '/tmp/pip-pip-egg-info-ebvcy21n/hapflk.egg-info/SOURCES.txt' 2025-09-08T09:35:10,648 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T09:35:10,653 Source in /tmp/pip-wheel-0a9ux5nz/hapflk_da95353a49974071bf24317674ab4d3e has version 1.4, which satisfies requirement hapflk==1.4 from https://files.pythonhosted.org/packages/51/c4/ed7b823aa136185d750d60f53268cfb6804dcc87183dbe216135e63aa583/hapflk-1.4.tar.gz 2025-09-08T09:35:10,653 Removed hapflk==1.4 from https://files.pythonhosted.org/packages/51/c4/ed7b823aa136185d750d60f53268cfb6804dcc87183dbe216135e63aa583/hapflk-1.4.tar.gz from build tracker '/tmp/pip-build-tracker-tfwzr0v2' 2025-09-08T09:35:10,656 Created temporary directory: /tmp/pip-unpack-z6r70pga 2025-09-08T09:35:10,656 Created temporary directory: /tmp/pip-unpack-0izhme5v 2025-09-08T09:35:10,657 Building wheels for collected packages: hapflk 2025-09-08T09:35:10,658 Created temporary directory: /tmp/pip-wheel-cqyisyjq 2025-09-08T09:35:10,658 DEPRECATION: Building 'hapflk' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'hapflk'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T09:35:10,659 Building wheel for hapflk (setup.py): started 2025-09-08T09:35:10,660 Destination directory: /tmp/pip-wheel-cqyisyjq 2025-09-08T09:35:10,660 Running command python setup.py bdist_wheel 2025-09-08T09:35:11,947 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:35:11,948 !! 2025-09-08T09:35:11,948 ******************************************************************************** 2025-09-08T09:35:11,948 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:35:11,948 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:35:11,948 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:35:11,948 ******************************************************************************** 2025-09-08T09:35:11,949 !! 2025-09-08T09:35:11,949 self._finalize_license_expression() 2025-09-08T09:35:11,949 running bdist_wheel 2025-09-08T09:35:12,321 running build 2025-09-08T09:35:12,321 running build_py 2025-09-08T09:35:12,397 creating build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:35:12,398 copying fastphase/__init__.py -> build/lib.linux-armv7l-cpython-313/fastphase 2025-09-08T09:35:12,399 creating build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:35:12,399 copying hapflk/popgen.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:35:12,400 copying hapflk/InputOutput.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:35:12,400 copying hapflk/nj.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:35:12,401 copying hapflk/data.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:35:12,402 copying hapflk/__init__.py -> build/lib.linux-armv7l-cpython-313/hapflk 2025-09-08T09:35:12,403 running build_ext 2025-09-08T09:35:12,750 building 'fastphaseCython' extension 2025-09-08T09:35:12,751 creating build/temp.linux-armv7l-cpython-313/fastphase 2025-09-08T09:35:12,751 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c fastphase/fastphaseCython.c -o build/temp.linux-armv7l-cpython-313/fastphase/fastphaseCython.o 2025-09-08T09:35:13,165 fastphase/fastphaseCython.c: In function ‘__Pyx_ListComp_Append’: 2025-09-08T09:35:13,165 fastphase/fastphaseCython.c:916:23: error: lvalue required as left operand of assignment 2025-09-08T09:35:13,165 916 | Py_SIZE(list) = len+1; 2025-09-08T09:35:13,165 | ^ 2025-09-08T09:35:13,166 fastphase/fastphaseCython.c: In function ‘__Pyx_PyList_Append’: 2025-09-08T09:35:13,166 fastphase/fastphaseCython.c:975:23: error: lvalue required as left operand of assignment 2025-09-08T09:35:13,166 975 | Py_SIZE(list) = len+1; 2025-09-08T09:35:13,166 | ^ 2025-09-08T09:35:13,260 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase___init__’: 2025-09-08T09:35:13,264 fastphase/fastphaseCython.c:4188:3: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:13,264 4188 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:35:13,265 | ^~ 2025-09-08T09:35:13,265 In file included from /usr/include/python3.13/Python.h:76, 2025-09-08T09:35:13,265 from fastphase/fastphaseCython.c:4: 2025-09-08T09:35:13,265 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:35:13,265 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:35:13,265 | ^~~~~~~~~~~~~~~ 2025-09-08T09:35:13,271 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase_4addHaplotype’: 2025-09-08T09:35:13,275 fastphase/fastphaseCython.c:4463:7: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:13,275 4463 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:35:13,275 | ^~ 2025-09-08T09:35:13,275 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:35:13,275 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:35:13,275 | ^~~~~~~~~~~~~~~ 2025-09-08T09:35:13,282 fastphase/fastphaseCython.c: In function ‘__pyx_pf_15fastphaseCython_9fastphase_6addGenotype’: 2025-09-08T09:35:13,287 fastphase/fastphaseCython.c:4749:7: warning: ‘Py_OptimizeFlag’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:13,287 4749 | if (unlikely(!Py_OptimizeFlag)) { 2025-09-08T09:35:13,287 | ^~ 2025-09-08T09:35:13,287 /usr/include/python3.13/cpython/pydebug.h:13:37: note: declared here 2025-09-08T09:35:13,287 13 | Py_DEPRECATED(3.12) PyAPI_DATA(int) Py_OptimizeFlag; 2025-09-08T09:35:13,288 | ^~~~~~~~~~~~~~~ 2025-09-08T09:35:14,526 fastphase/fastphaseCython.c: In function ‘__pyx_pf_5numpy_7ndarray___getbuffer__’: 2025-09-08T09:35:14,548 fastphase/fastphaseCython.c:13311:50: error: ‘NPY_C_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_C_CONTIGUOUS’? 2025-09-08T09:35:14,548 13311 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_C_CONTIGUOUS) != 0)) != 0); 2025-09-08T09:35:14,549 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,549 | PyBUF_C_CONTIGUOUS 2025-09-08T09:35:14,550 fastphase/fastphaseCython.c:13311:50: note: each undeclared identifier is reported only once for each function it appears in 2025-09-08T09:35:14,595 fastphase/fastphaseCython.c:13367:50: error: ‘NPY_F_CONTIGUOUS’ undeclared (first use in this function); did you mean ‘PyBUF_F_CONTIGUOUS’? 2025-09-08T09:35:14,595 13367 | __pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_F_CONTIGUOUS) != 0)) != 0); 2025-09-08T09:35:14,596 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,596 | PyBUF_F_CONTIGUOUS 2025-09-08T09:35:14,603 fastphase/fastphaseCython.c: In function ‘__pyx_f_5numpy__util_dtypestring’: 2025-09-08T09:35:14,621 fastphase/fastphaseCython.c:14433:29: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T09:35:14,622 14433 | if (unlikely(__pyx_v_descr->names == Py_None)) { 2025-09-08T09:35:14,622 | ^~ 2025-09-08T09:35:14,622 fastphase/fastphaseCython.c:434:43: note: in definition of macro ‘unlikely’ 2025-09-08T09:35:14,622 434 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T09:35:14,622 | ^ 2025-09-08T09:35:14,640 fastphase/fastphaseCython.c:14437:28: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘names’ 2025-09-08T09:35:14,640 14437 | __pyx_t_1 = __pyx_v_descr->names; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; 2025-09-08T09:35:14,640 | ^~ 2025-09-08T09:35:14,660 fastphase/fastphaseCython.c:14456:31: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T09:35:14,660 14456 | if (unlikely(__pyx_v_descr->fields == Py_None)) { 2025-09-08T09:35:14,661 | ^~ 2025-09-08T09:35:14,661 fastphase/fastphaseCython.c:434:43: note: in definition of macro ‘unlikely’ 2025-09-08T09:35:14,661 434 | #define unlikely(x) __builtin_expect(!!(x), 0) 2025-09-08T09:35:14,661 | ^ 2025-09-08T09:35:14,679 fastphase/fastphaseCython.c:14460:51: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘fields’ 2025-09-08T09:35:14,679 14460 | __pyx_t_3 = __Pyx_PyDict_GetItem(__pyx_v_descr->fields, __pyx_v_childname); if (unlikely(__pyx_t_3 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; 2025-09-08T09:35:14,679 | ^~ 2025-09-08T09:35:14,709 fastphase/fastphaseCython.c:14665:79: error: ‘PyArray_Descr’ {aka ‘struct _PyArray_Descr’} has no member named ‘elsize’ 2025-09-08T09:35:14,709 14665 | (__pyx_v_offset[__pyx_t_8]) = ((__pyx_v_offset[__pyx_t_8]) + __pyx_v_child->elsize); 2025-09-08T09:35:14,710 | ^~ 2025-09-08T09:35:14,726 fastphase/fastphaseCython.c: In function ‘__Pyx_InitCachedConstants’: 2025-09-08T09:35:14,744 fastphase/fastphaseCython.c:15588:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:14,744 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,744 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,744 In file included from /usr/include/python3.13/Python.h:101: 2025-09-08T09:35:14,744 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:14,744 213 | PyCode_New( 2025-09-08T09:35:14,745 | ^~~~~~~~~~ 2025-09-08T09:35:14,764 fastphase/fastphaseCython.c:15588:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:14,764 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,764 | ^~ 2025-09-08T09:35:14,764 | | 2025-09-08T09:35:14,764 | int 2025-09-08T09:35:14,764 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,765 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,765 | ^~~~~ 2025-09-08T09:35:14,765 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:14,765 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:14,765 | ~~~~~~~~~~^ 2025-09-08T09:35:14,783 fastphase/fastphaseCython.c:15588:242: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:14,784 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,784 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,784 | | 2025-09-08T09:35:14,784 | PyObject * {aka struct _object *} 2025-09-08T09:35:14,784 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,784 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,784 | ^~~~ 2025-09-08T09:35:14,784 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:14,784 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:14,784 | ~~~~^ 2025-09-08T09:35:14,803 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:14,803 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,803 | ^~~~~~~~~~ 2025-09-08T09:35:14,803 fastphase/fastphaseCython.c:15588:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,803 15588 | __pyx_codeobj__13 = (PyObject*)__Pyx_PyCode_New(3, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__12, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 26, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__13)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,804 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,804 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:14,804 213 | PyCode_New( 2025-09-08T09:35:14,804 | ^~~~~~~~~~ 2025-09-08T09:35:14,821 fastphase/fastphaseCython.c:15600:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:14,821 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,821 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,821 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:14,821 213 | PyCode_New( 2025-09-08T09:35:14,821 | ^~~~~~~~~~ 2025-09-08T09:35:14,840 fastphase/fastphaseCython.c:15600:244: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:14,840 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,841 | ^~ 2025-09-08T09:35:14,841 | | 2025-09-08T09:35:14,841 | int 2025-09-08T09:35:14,841 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,841 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,841 | ^~~~~ 2025-09-08T09:35:14,841 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:14,841 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:14,841 | ~~~~~~~~~~^ 2025-09-08T09:35:14,860 fastphase/fastphaseCython.c:15600:248: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:14,860 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,860 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,860 | | 2025-09-08T09:35:14,860 | PyObject * {aka struct _object *} 2025-09-08T09:35:14,860 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,861 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,861 | ^~~~ 2025-09-08T09:35:14,861 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:14,861 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:14,861 | ~~~~^ 2025-09-08T09:35:14,879 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:14,880 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,880 | ^~~~~~~~~~ 2025-09-08T09:35:14,880 fastphase/fastphaseCython.c:15600:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,880 15600 | __pyx_codeobj__15 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__14, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_initUpdate, 32, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,880 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,880 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:14,880 213 | PyCode_New( 2025-09-08T09:35:14,880 | ^~~~~~~~~~ 2025-09-08T09:35:14,897 fastphase/fastphaseCython.c:15612:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:14,897 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,898 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,898 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:14,898 213 | PyCode_New( 2025-09-08T09:35:14,898 | ^~~~~~~~~~ 2025-09-08T09:35:14,917 fastphase/fastphaseCython.c:15612:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:14,917 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,917 | ^~ 2025-09-08T09:35:14,917 | | 2025-09-08T09:35:14,917 | int 2025-09-08T09:35:14,917 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,918 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,918 | ^~~~~ 2025-09-08T09:35:14,918 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:14,918 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:14,918 | ~~~~~~~~~~^ 2025-09-08T09:35:14,937 fastphase/fastphaseCython.c:15612:249: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:14,937 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,937 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,937 | | 2025-09-08T09:35:14,937 | PyObject * {aka struct _object *} 2025-09-08T09:35:14,937 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,937 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,937 | ^~~~ 2025-09-08T09:35:14,937 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:14,937 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:14,938 | ~~~~^ 2025-09-08T09:35:14,956 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:14,956 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,956 | ^~~~~~~~~~ 2025-09-08T09:35:14,956 fastphase/fastphaseCython.c:15612:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,957 15612 | __pyx_codeobj__17 = (PyObject*)__Pyx_PyCode_New(5, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__16, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addIndivFit, 38, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__17)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,957 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,957 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:14,957 213 | PyCode_New( 2025-09-08T09:35:14,957 | ^~~~~~~~~~ 2025-09-08T09:35:14,974 fastphase/fastphaseCython.c:15624:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:14,974 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,974 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:14,974 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:14,974 213 | PyCode_New( 2025-09-08T09:35:14,974 | ^~~~~~~~~~ 2025-09-08T09:35:14,994 fastphase/fastphaseCython.c:15624:240: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:14,994 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:14,994 | ^~ 2025-09-08T09:35:14,994 | | 2025-09-08T09:35:14,994 | int 2025-09-08T09:35:14,994 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:14,994 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:14,994 | ^~~~~ 2025-09-08T09:35:14,994 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:14,994 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:14,995 | ~~~~~~~~~~^ 2025-09-08T09:35:15,013 fastphase/fastphaseCython.c:15624:244: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:15,013 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,013 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,014 | | 2025-09-08T09:35:15,014 | PyObject * {aka struct _object *} 2025-09-08T09:35:15,014 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,014 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,014 | ^~~~ 2025-09-08T09:35:15,014 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:15,014 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,014 | ~~~~^ 2025-09-08T09:35:15,033 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:15,033 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,033 | ^~~~~~~~~~ 2025-09-08T09:35:15,033 fastphase/fastphaseCython.c:15624:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,033 15624 | __pyx_codeobj__19 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__18, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_update, 44, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,033 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,033 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,034 213 | PyCode_New( 2025-09-08T09:35:15,034 | ^~~~~~~~~~ 2025-09-08T09:35:15,051 fastphase/fastphaseCython.c:15636:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:15,051 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,051 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,051 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,051 213 | PyCode_New( 2025-09-08T09:35:15,051 | ^~~~~~~~~~ 2025-09-08T09:35:15,070 fastphase/fastphaseCython.c:15636:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:15,070 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,071 | ^~ 2025-09-08T09:35:15,071 | | 2025-09-08T09:35:15,071 | int 2025-09-08T09:35:15,071 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,071 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,071 | ^~~~~ 2025-09-08T09:35:15,071 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:15,071 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,071 | ~~~~~~~~~~^ 2025-09-08T09:35:15,090 fastphase/fastphaseCython.c:15636:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:15,090 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,090 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,090 | | 2025-09-08T09:35:15,090 | PyObject * {aka struct _object *} 2025-09-08T09:35:15,091 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,091 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,091 | ^~~~ 2025-09-08T09:35:15,091 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:15,091 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,091 | ~~~~^ 2025-09-08T09:35:15,110 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:15,110 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,110 | ^~~~~~~~~~ 2025-09-08T09:35:15,110 fastphase/fastphaseCython.c:15636:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,110 15636 | __pyx_codeobj__21 = (PyObject*)__Pyx_PyCode_New(2, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__20, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_write, 69, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__21)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 69; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,110 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,110 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,110 213 | PyCode_New( 2025-09-08T09:35:15,110 | ^~~~~~~~~~ 2025-09-08T09:35:15,128 fastphase/fastphaseCython.c:15648:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:15,128 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,128 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,128 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,128 213 | PyCode_New( 2025-09-08T09:35:15,128 | ^~~~~~~~~~ 2025-09-08T09:35:15,147 fastphase/fastphaseCython.c:15648:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:15,147 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,147 | ^~ 2025-09-08T09:35:15,147 | | 2025-09-08T09:35:15,148 | int 2025-09-08T09:35:15,148 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,148 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,148 | ^~~~~ 2025-09-08T09:35:15,148 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:15,148 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,148 | ~~~~~~~~~~^ 2025-09-08T09:35:15,167 fastphase/fastphaseCython.c:15648:242: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:15,167 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,167 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,167 | | 2025-09-08T09:35:15,167 | PyObject * {aka struct _object *} 2025-09-08T09:35:15,167 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,167 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,168 | ^~~~ 2025-09-08T09:35:15,168 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:15,168 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,168 | ~~~~^ 2025-09-08T09:35:15,186 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:15,187 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,187 | ^~~~~~~~~~ 2025-09-08T09:35:15,187 fastphase/fastphaseCython.c:15648:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,187 15648 | __pyx_codeobj__23 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__22, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_init, 85, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__23)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,187 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,187 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,187 213 | PyCode_New( 2025-09-08T09:35:15,187 | ^~~~~~~~~~ 2025-09-08T09:35:15,204 fastphase/fastphaseCython.c:15660:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:15,204 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,205 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,205 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,205 213 | PyCode_New( 2025-09-08T09:35:15,205 | ^~~~~~~~~~ 2025-09-08T09:35:15,224 fastphase/fastphaseCython.c:15660:239: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:15,224 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,224 | ^~ 2025-09-08T09:35:15,224 | | 2025-09-08T09:35:15,224 | int 2025-09-08T09:35:15,225 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,225 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,225 | ^~~~~ 2025-09-08T09:35:15,225 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:15,225 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,225 | ~~~~~~~~~~^ 2025-09-08T09:35:15,244 fastphase/fastphaseCython.c:15660:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:15,244 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,244 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,244 | | 2025-09-08T09:35:15,244 | PyObject * {aka struct _object *} 2025-09-08T09:35:15,244 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,244 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,244 | ^~~~ 2025-09-08T09:35:15,245 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:15,245 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,245 | ~~~~^ 2025-09-08T09:35:15,263 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:15,264 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,264 | ^~~~~~~~~~ 2025-09-08T09:35:15,264 fastphase/fastphaseCython.c:15660:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,264 15660 | __pyx_codeobj__25 = (PyObject*)__Pyx_PyCode_New(1, 0, 1, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__24, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_flush, 90, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__25)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,264 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,264 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,264 213 | PyCode_New( 2025-09-08T09:35:15,264 | ^~~~~~~~~~ 2025-09-08T09:35:15,281 fastphase/fastphaseCython.c:15672:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:15,281 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,282 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,282 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,282 213 | PyCode_New( 2025-09-08T09:35:15,282 | ^~~~~~~~~~ 2025-09-08T09:35:15,301 fastphase/fastphaseCython.c:15672:246: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:15,301 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,301 | ^~ 2025-09-08T09:35:15,301 | | 2025-09-08T09:35:15,301 | int 2025-09-08T09:35:15,301 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,302 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,302 | ^~~~~ 2025-09-08T09:35:15,302 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:15,302 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,302 | ~~~~~~~~~~^ 2025-09-08T09:35:15,321 fastphase/fastphaseCython.c:15672:250: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:15,321 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,321 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,321 | | 2025-09-08T09:35:15,321 | PyObject * {aka struct _object *} 2025-09-08T09:35:15,321 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,321 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,321 | ^~~~ 2025-09-08T09:35:15,322 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:15,322 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,322 | ~~~~^ 2025-09-08T09:35:15,340 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:15,341 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,341 | ^~~~~~~~~~ 2025-09-08T09:35:15,341 fastphase/fastphaseCython.c:15672:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,341 15672 | __pyx_codeobj__27 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__26, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addHaplotype, 96, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,341 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,341 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,341 213 | PyCode_New( 2025-09-08T09:35:15,341 | ^~~~~~~~~~ 2025-09-08T09:35:15,358 fastphase/fastphaseCython.c:15687:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:15,359 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,359 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,359 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,359 213 | PyCode_New( 2025-09-08T09:35:15,359 | ^~~~~~~~~~ 2025-09-08T09:35:15,378 fastphase/fastphaseCython.c:15687:245: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:15,378 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,378 | ^~~ 2025-09-08T09:35:15,379 | | 2025-09-08T09:35:15,379 | int 2025-09-08T09:35:15,379 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,379 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,379 | ^~~~~ 2025-09-08T09:35:15,379 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:15,379 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,379 | ~~~~~~~~~~^ 2025-09-08T09:35:15,398 fastphase/fastphaseCython.c:15687:250: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:15,398 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,398 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,398 | | 2025-09-08T09:35:15,398 | PyObject * {aka struct _object *} 2025-09-08T09:35:15,398 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,399 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,399 | ^~~~ 2025-09-08T09:35:15,399 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:15,399 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,399 | ~~~~^ 2025-09-08T09:35:15,418 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:15,418 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,418 | ^~~~~~~~~~ 2025-09-08T09:35:15,418 fastphase/fastphaseCython.c:15687:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,418 15687 | __pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(4, 0, 4, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_addGenotype, 108, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,418 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,418 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,418 213 | PyCode_New( 2025-09-08T09:35:15,418 | ^~~~~~~~~~ 2025-09-08T09:35:15,436 fastphase/fastphaseCython.c:15702:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:15,436 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,436 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,436 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,436 213 | PyCode_New( 2025-09-08T09:35:15,436 | ^~~~~~~~~~ 2025-09-08T09:35:15,456 fastphase/fastphaseCython.c:15702:238: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:15,456 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,456 | ^~~ 2025-09-08T09:35:15,456 | | 2025-09-08T09:35:15,456 | int 2025-09-08T09:35:15,456 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,456 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,456 | ^~~~~ 2025-09-08T09:35:15,456 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:15,457 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,457 | ~~~~~~~~~~^ 2025-09-08T09:35:15,475 fastphase/fastphaseCython.c:15702:243: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:15,476 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,476 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,476 | | 2025-09-08T09:35:15,476 | PyObject * {aka struct _object *} 2025-09-08T09:35:15,476 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,476 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,476 | ^~~~ 2025-09-08T09:35:15,476 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:15,476 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,476 | ~~~~^ 2025-09-08T09:35:15,495 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:15,495 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,495 | ^~~~~~~~~~ 2025-09-08T09:35:15,496 fastphase/fastphaseCython.c:15702:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,496 15702 | __pyx_codeobj__33 = (PyObject*)__Pyx_PyCode_New(6, 0, 19, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__32, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_fit, 120, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__33)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 120; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,496 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,496 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,496 213 | PyCode_New( 2025-09-08T09:35:15,496 | ^~~~~~~~~~ 2025-09-08T09:35:15,513 fastphase/fastphaseCython.c:15717:3: warning: ‘PyCode_New’ is deprecated [-Wdeprecated-declarations] 2025-09-08T09:35:15,514 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,514 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,514 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,514 213 | PyCode_New( 2025-09-08T09:35:15,514 | ^~~~~~~~~~ 2025-09-08T09:35:15,533 fastphase/fastphaseCython.c:15717:241: error: passing argument 14 of ‘PyCode_New’ makes pointer from integer without a cast [-Wint-conversion] 2025-09-08T09:35:15,533 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,533 | ^~~ 2025-09-08T09:35:15,534 | | 2025-09-08T09:35:15,534 | int 2025-09-08T09:35:15,534 fastphase/fastphaseCython.c:61:72: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,534 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,534 | ^~~~~ 2025-09-08T09:35:15,534 /usr/include/python3.13/cpython/code.h:216:45: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘int’ 2025-09-08T09:35:15,534 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,534 | ~~~~~~~~~~^ 2025-09-08T09:35:15,553 fastphase/fastphaseCython.c:15717:246: error: passing argument 15 of ‘PyCode_New’ makes integer from pointer without a cast [-Wint-conversion] 2025-09-08T09:35:15,553 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,553 | ^~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,553 | | 2025-09-08T09:35:15,553 | PyObject * {aka struct _object *} 2025-09-08T09:35:15,554 fastphase/fastphaseCython.c:61:79: note: in definition of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,554 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,554 | ^~~~ 2025-09-08T09:35:15,554 /usr/include/python3.13/cpython/code.h:216:52: note: expected ‘int’ but argument is of type ‘PyObject *’ {aka ‘struct _object *’} 2025-09-08T09:35:15,554 216 | PyObject *l, PyObject *m, PyObject *n, int o, PyObject *p, 2025-09-08T09:35:15,554 | ~~~~^ 2025-09-08T09:35:15,573 fastphase/fastphaseCython.c:61:11: error: too few arguments to function ‘PyCode_New’ 2025-09-08T09:35:15,573 61 | PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) 2025-09-08T09:35:15,573 | ^~~~~~~~~~ 2025-09-08T09:35:15,573 fastphase/fastphaseCython.c:15717:34: note: in expansion of macro ‘__Pyx_PyCode_New’ 2025-09-08T09:35:15,573 15717 | __pyx_codeobj__36 = (PyObject*)__Pyx_PyCode_New(3, 0, 15, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__35, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_mnt_dynfs_home_Code_python_pack, __pyx_n_s_impute, 172, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 2025-09-08T09:35:15,573 | ^~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,573 /usr/include/python3.13/cpython/code.h:213:1: note: declared here 2025-09-08T09:35:15,574 213 | PyCode_New( 2025-09-08T09:35:15,574 | ^~~~~~~~~~ 2025-09-08T09:35:15,611 fastphase/fastphaseCython.c: In function ‘__Pyx_ParseOptionalKeywords’: 2025-09-08T09:35:15,637 fastphase/fastphaseCython.c:16241:22: error: implicit declaration of function ‘PyUnicode_GET_SIZE’; did you mean ‘PyDict_GET_SIZE’? [-Wimplicit-function-declaration] 2025-09-08T09:35:15,637 16241 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2025-09-08T09:35:15,637 | ^~~~~~~~~~~~~~~~~~ 2025-09-08T09:35:15,638 | PyDict_GET_SIZE 2025-09-08T09:35:15,656 fastphase/fastphaseCython.c: At top level: 2025-09-08T09:35:15,675 fastphase/fastphaseCython.c:16295:12: fatal error: longintrepr.h: No such file or directory 2025-09-08T09:35:15,675 16295 | #include "longintrepr.h" 2025-09-08T09:35:15,675 | ^~~~~~~~~~~~~~~ 2025-09-08T09:35:15,675 compilation terminated. 2025-09-08T09:35:15,681 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-08T09:35:15,853 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T09:35:15,865 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T09:35:15,865 exec(compile('"'"''"'"''"'"' 2025-09-08T09:35:15,865 # This is -- a caller that pip uses to run setup.py 2025-09-08T09:35:15,865 # 2025-09-08T09:35:15,865 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T09:35:15,865 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T09:35:15,865 # - It provides a clear error message when setuptools is not installed. 2025-09-08T09:35:15,865 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T09:35:15,865 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T09:35:15,865 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T09:35:15,865 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T09:35:15,865 import os, sys, tokenize, traceback 2025-09-08T09:35:15,865 2025-09-08T09:35:15,865 try: 2025-09-08T09:35:15,865 import setuptools 2025-09-08T09:35:15,865 except ImportError: 2025-09-08T09:35:15,865 print( 2025-09-08T09:35:15,865 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T09:35:15,865 "the build environment with exception:", 2025-09-08T09:35:15,865 file=sys.stderr, 2025-09-08T09:35:15,865 ) 2025-09-08T09:35:15,865 traceback.print_exc() 2025-09-08T09:35:15,865 sys.exit(1) 2025-09-08T09:35:15,865 2025-09-08T09:35:15,865 __file__ = %r 2025-09-08T09:35:15,865 sys.argv[0] = __file__ 2025-09-08T09:35:15,865 2025-09-08T09:35:15,865 if os.path.exists(__file__): 2025-09-08T09:35:15,865 filename = __file__ 2025-09-08T09:35:15,865 with tokenize.open(__file__) as f: 2025-09-08T09:35:15,865 setup_py_code = f.read() 2025-09-08T09:35:15,865 else: 2025-09-08T09:35:15,865 filename = "" 2025-09-08T09:35:15,865 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T09:35:15,865 2025-09-08T09:35:15,865 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T09:35:15,865 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-0a9ux5nz/hapflk_da95353a49974071bf24317674ab4d3e/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-cqyisyjq[/] 2025-09-08T09:35:15,865 [bold magenta]cwd[/]: /tmp/pip-wheel-0a9ux5nz/hapflk_da95353a49974071bf24317674ab4d3e/ 2025-09-08T09:35:15,865 Building wheel for hapflk (setup.py): finished with status 'error' 2025-09-08T09:35:15,866 ERROR: Failed building wheel for hapflk 2025-09-08T09:35:15,866 Running setup.py clean for hapflk 2025-09-08T09:35:15,867 Running command python setup.py clean 2025-09-08T09:35:17,158 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T09:35:17,158 !! 2025-09-08T09:35:17,159 ******************************************************************************** 2025-09-08T09:35:17,159 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T09:35:17,159 License :: OSI Approved :: GNU General Public License (GPL) 2025-09-08T09:35:17,159 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T09:35:17,159 ******************************************************************************** 2025-09-08T09:35:17,159 !! 2025-09-08T09:35:17,160 self._finalize_license_expression() 2025-09-08T09:35:17,234 running clean 2025-09-08T09:35:17,377 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:35:17,377 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T09:35:17,378 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T09:35:17,378 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T09:35:17,378 removing 'build' 2025-09-08T09:35:17,513 Failed to build hapflk 2025-09-08T09:35:17,514 ERROR: Failed to build one or more wheels 2025-09-08T09:35:17,515 Exception information: 2025-09-08T09:35:17,515 Traceback (most recent call last): 2025-09-08T09:35:17,515 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T09:35:17,515 status = _inner_run() 2025-09-08T09:35:17,515 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T09:35:17,515 return self.run(options, args) 2025-09-08T09:35:17,515 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T09:35:17,515 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T09:35:17,515 return func(self, options, args) 2025-09-08T09:35:17,515 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T09:35:17,515 raise CommandError("Failed to build one or more wheels") 2025-09-08T09:35:17,515 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T09:35:17,519 Removed build tracker: '/tmp/pip-build-tracker-tfwzr0v2'