2025-09-08T11:28:48,921 Created temporary directory: /tmp/pip-build-tracker-65k7whug 2025-09-08T11:28:48,922 Initialized build tracking at /tmp/pip-build-tracker-65k7whug 2025-09-08T11:28:48,922 Created build tracker: /tmp/pip-build-tracker-65k7whug 2025-09-08T11:28:48,922 Entered build tracker: /tmp/pip-build-tracker-65k7whug 2025-09-08T11:28:48,922 Created temporary directory: /tmp/pip-wheel-vodc8tx6 2025-09-08T11:28:48,925 Created temporary directory: /tmp/pip-ephem-wheel-cache-ye05rb5i 2025-09-08T11:28:48,981 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T11:28:48,983 2 location(s) to search for versions of genomelake: 2025-09-08T11:28:48,983 * https://pypi.org/simple/genomelake/ 2025-09-08T11:28:48,983 * https://www.piwheels.org/simple/genomelake/ 2025-09-08T11:28:48,984 Fetching project page and analyzing links: https://pypi.org/simple/genomelake/ 2025-09-08T11:28:48,984 Getting page https://pypi.org/simple/genomelake/ 2025-09-08T11:28:48,985 Found index url https://pypi.org/simple/ 2025-09-08T11:28:49,055 Fetched page https://pypi.org/simple/genomelake/ as application/vnd.pypi.simple.v1+json 2025-09-08T11:28:49,056 Found link https://files.pythonhosted.org/packages/61/ff/e44bf090afa15196ab8b561fa006df736d03a9112614f613f097f5232b20/genomelake-0.1.1.tar.gz (from https://pypi.org/simple/genomelake/), version: 0.1.1 2025-09-08T11:28:49,056 Found link https://files.pythonhosted.org/packages/7f/a4/3d4211b0cf4ef57bb2103b37cfe8d0a4484f77d45bf5969fc02d2521fc4a/genomelake-0.1.2.tar.gz (from https://pypi.org/simple/genomelake/), version: 0.1.2 2025-09-08T11:28:49,056 Found link https://files.pythonhosted.org/packages/7d/2c/aadd37728e26d89dbbe47200d60d861b11e4416b707fa4ec16cf9e1f1141/genomelake-0.1.3.tar.gz (from https://pypi.org/simple/genomelake/), version: 0.1.3 2025-09-08T11:28:49,056 Found link https://files.pythonhosted.org/packages/07/f9/bfefaffe5478615f126704c385d0f38383d9dd912a65fb090eced83ba01e/genomelake-0.1.4.tar.gz (from https://pypi.org/simple/genomelake/), version: 0.1.4 2025-09-08T11:28:49,057 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomelake/ 2025-09-08T11:28:49,057 Getting page https://www.piwheels.org/simple/genomelake/ 2025-09-08T11:28:49,058 Found index url https://www.piwheels.org/simple/ 2025-09-08T11:28:49,146 Fetched page https://www.piwheels.org/simple/genomelake/ as text/html 2025-09-08T11:28:49,151 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp35-cp35m-linux_armv6l.whl#sha256=b35ed15acc4e85ba04ec2ac703cf11908334cd7504c4d9a970f390141ce70792 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,151 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp35-cp35m-linux_armv7l.whl#sha256=b35ed15acc4e85ba04ec2ac703cf11908334cd7504c4d9a970f390141ce70792 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,152 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp34-cp34m-linux_armv6l.whl#sha256=3e8e9e033a6878a9aa650031e494d0a06800065a30664ab6e4c0d9c0d71b2ed5 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,152 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp34-cp34m-linux_armv7l.whl#sha256=3e8e9e033a6878a9aa650031e494d0a06800065a30664ab6e4c0d9c0d71b2ed5 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,152 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp311-cp311-linux_armv6l.whl#sha256=0b734d5d818f6d45aa9dbfce10ceb62a58c06a974b84604b4d45c2727b0ceabf (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,152 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp311-cp311-linux_armv7l.whl#sha256=0b734d5d818f6d45aa9dbfce10ceb62a58c06a974b84604b4d45c2727b0ceabf (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,152 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp35-cp35m-linux_armv7l.whl#sha256=9ed8b9db2fff15d0ca3b9d45af6bc192143a4fe695e998f5b011e243fdd173d4 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,152 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp35-cp35m-linux_armv6l.whl#sha256=9ed8b9db2fff15d0ca3b9d45af6bc192143a4fe695e998f5b011e243fdd173d4 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,153 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp34-cp34m-linux_armv7l.whl#sha256=917ab7e24bc2ca06a3457720716996f18694e1738c89e46e17537af3bac3058e (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,153 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp34-cp34m-linux_armv6l.whl#sha256=917ab7e24bc2ca06a3457720716996f18694e1738c89e46e17537af3bac3058e (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,153 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp311-cp311-linux_armv6l.whl#sha256=0d977c467064bdfa99e4a508808aede09e5c51f1f1462c36bb8a50bf5b675d83 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,153 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp311-cp311-linux_armv7l.whl#sha256=0d977c467064bdfa99e4a508808aede09e5c51f1f1462c36bb8a50bf5b675d83 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,153 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp37-cp37m-linux_armv7l.whl#sha256=4f26d6e757f3111f433eebc6c6b96d36516ffdb5b5d965cf86ec98e9734e03fd (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,153 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp37-cp37m-linux_armv6l.whl#sha256=4f26d6e757f3111f433eebc6c6b96d36516ffdb5b5d965cf86ec98e9734e03fd (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,153 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=bfb10d510e2f76942f033126e00bea3a4d82beffacfb1d04a7a52a77b563b587 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,154 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=bfb10d510e2f76942f033126e00bea3a4d82beffacfb1d04a7a52a77b563b587 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,154 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp34-cp34m-linux_armv7l.whl#sha256=a4ddded13739145009abf8c74b2bf25cb2a00656d41dc6f18aabdfbcb832475c (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,154 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp34-cp34m-linux_armv6l.whl#sha256=a4ddded13739145009abf8c74b2bf25cb2a00656d41dc6f18aabdfbcb832475c (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,154 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp311-cp311-linux_armv6l.whl#sha256=1897df9c3426a8ba0a0e7bc78db595ad8dea1fecce89850071c233cdce4965f1 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,154 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp311-cp311-linux_armv7l.whl#sha256=1897df9c3426a8ba0a0e7bc78db595ad8dea1fecce89850071c233cdce4965f1 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,154 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp39-cp39-linux_armv6l.whl#sha256=28906610565412569a83928d28e306e87ebf215e4c7c121d808d803a7a7cba2d (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,155 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp39-cp39-linux_armv7l.whl#sha256=28906610565412569a83928d28e306e87ebf215e4c7c121d808d803a7a7cba2d (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,155 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.1-py3-none-any.whl#sha256=d6f3505ca40cff1a6a5fc082478520661f061c716ab92ec605889e3b24c58ee8 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T11:28:49,155 Skipping link: not a file: https://www.piwheels.org/simple/genomelake/ 2025-09-08T11:28:49,155 Skipping link: not a file: https://pypi.org/simple/genomelake/ 2025-09-08T11:28:49,180 Given no hashes to check 1 links for project 'genomelake': discarding no candidates 2025-09-08T11:28:49,181 Collecting genomelake==0.1.3 2025-09-08T11:28:49,183 Created temporary directory: /tmp/pip-unpack-miplh4j1 2025-09-08T11:28:49,323 Downloading genomelake-0.1.3.tar.gz (88 kB) 2025-09-08T11:28:49,372 Added genomelake==0.1.3 from https://files.pythonhosted.org/packages/7d/2c/aadd37728e26d89dbbe47200d60d861b11e4416b707fa4ec16cf9e1f1141/genomelake-0.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-65k7whug' 2025-09-08T11:28:49,373 Running setup.py (path:/tmp/pip-wheel-vodc8tx6/genomelake_b1deb9a7bf2a44cf9d5ccaa6ed90f316/setup.py) egg_info for package genomelake 2025-09-08T11:28:49,373 Created temporary directory: /tmp/pip-pip-egg-info-h1z5aoo8 2025-09-08T11:28:49,373 Preparing metadata (setup.py): started 2025-09-08T11:28:49,374 Running command python setup.py egg_info 2025-09-08T11:28:49,989 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-08T11:28:49,989 !! 2025-09-08T11:28:49,989 ******************************************************************************** 2025-09-08T11:28:49,990 Usage of dash-separated 'description-file' will not be supported in future 2025-09-08T11:28:49,990 versions. Please use the underscore name 'description_file' instead. 2025-09-08T11:28:49,990 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-08T11:28:49,990 or your builds will no longer be supported. 2025-09-08T11:28:49,990 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-08T11:28:49,990 ******************************************************************************** 2025-09-08T11:28:49,990 !! 2025-09-08T11:28:49,991 opt = self._enforce_underscore(opt, section) 2025-09-08T11:28:50,014 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T11:28:50,014 !! 2025-09-08T11:28:50,014 ******************************************************************************** 2025-09-08T11:28:50,014 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T11:28:50,014 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T11:28:50,015 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T11:28:50,015 or your builds will no longer be supported. 2025-09-08T11:28:50,015 ******************************************************************************** 2025-09-08T11:28:50,015 !! 2025-09-08T11:28:50,015 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T11:28:50,494 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-08T11:28:50,494 !! 2025-09-08T11:28:50,494 ******************************************************************************** 2025-09-08T11:28:50,494 Usage of dash-separated 'description-file' will not be supported in future 2025-09-08T11:28:50,494 versions. Please use the underscore name 'description_file' instead. 2025-09-08T11:28:50,494 (Affected: genomelake). 2025-09-08T11:28:50,494 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-08T11:28:50,495 or your builds will no longer be supported. 2025-09-08T11:28:50,495 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-08T11:28:50,495 ******************************************************************************** 2025-09-08T11:28:50,495 !! 2025-09-08T11:28:50,495 opt = self._enforce_underscore(opt, section) 2025-09-08T11:28:50,495 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T11:28:50,495 !! 2025-09-08T11:28:50,496 ******************************************************************************** 2025-09-08T11:28:50,496 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T11:28:50,496 License :: OSI Approved :: BSD License 2025-09-08T11:28:50,496 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T11:28:50,496 ******************************************************************************** 2025-09-08T11:28:50,496 !! 2025-09-08T11:28:50,496 self._finalize_license_expression() 2025-09-08T11:28:50,569 running egg_info 2025-09-08T11:28:50,643 creating /tmp/pip-pip-egg-info-h1z5aoo8/genomelake.egg-info 2025-09-08T11:28:50,643 writing /tmp/pip-pip-egg-info-h1z5aoo8/genomelake.egg-info/PKG-INFO 2025-09-08T11:28:50,644 writing dependency_links to /tmp/pip-pip-egg-info-h1z5aoo8/genomelake.egg-info/dependency_links.txt 2025-09-08T11:28:50,645 writing requirements to /tmp/pip-pip-egg-info-h1z5aoo8/genomelake.egg-info/requires.txt 2025-09-08T11:28:50,645 writing top-level names to /tmp/pip-pip-egg-info-h1z5aoo8/genomelake.egg-info/top_level.txt 2025-09-08T11:28:50,646 writing manifest file '/tmp/pip-pip-egg-info-h1z5aoo8/genomelake.egg-info/SOURCES.txt' 2025-09-08T11:28:50,941 reading manifest file '/tmp/pip-pip-egg-info-h1z5aoo8/genomelake.egg-info/SOURCES.txt' 2025-09-08T11:28:50,941 reading manifest template 'MANIFEST.in' 2025-09-08T11:28:50,943 warning: no previously-included files matching '__pycache__' found under directory '*' 2025-09-08T11:28:50,943 warning: no previously-included files matching '*.py[co]' found under directory '*' 2025-09-08T11:28:50,943 adding license file 'LICENSE' 2025-09-08T11:28:50,946 writing manifest file '/tmp/pip-pip-egg-info-h1z5aoo8/genomelake.egg-info/SOURCES.txt' 2025-09-08T11:28:51,060 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T11:28:51,065 Source in /tmp/pip-wheel-vodc8tx6/genomelake_b1deb9a7bf2a44cf9d5ccaa6ed90f316 has version 0.1.3, which satisfies requirement genomelake==0.1.3 from https://files.pythonhosted.org/packages/7d/2c/aadd37728e26d89dbbe47200d60d861b11e4416b707fa4ec16cf9e1f1141/genomelake-0.1.3.tar.gz 2025-09-08T11:28:51,066 Removed genomelake==0.1.3 from https://files.pythonhosted.org/packages/7d/2c/aadd37728e26d89dbbe47200d60d861b11e4416b707fa4ec16cf9e1f1141/genomelake-0.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-65k7whug' 2025-09-08T11:28:51,073 Created temporary directory: /tmp/pip-unpack-8_49zo6t 2025-09-08T11:28:51,073 Created temporary directory: /tmp/pip-unpack-ybdl3npv 2025-09-08T11:28:51,074 Building wheels for collected packages: genomelake 2025-09-08T11:28:51,075 Created temporary directory: /tmp/pip-wheel-mc25tkz2 2025-09-08T11:28:51,076 DEPRECATION: Building 'genomelake' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'genomelake'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T11:28:51,077 Building wheel for genomelake (setup.py): started 2025-09-08T11:28:51,078 Destination directory: /tmp/pip-wheel-mc25tkz2 2025-09-08T11:28:51,078 Running command python setup.py bdist_wheel 2025-09-08T11:28:51,698 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-08T11:28:51,698 !! 2025-09-08T11:28:51,698 ******************************************************************************** 2025-09-08T11:28:51,698 Usage of dash-separated 'description-file' will not be supported in future 2025-09-08T11:28:51,698 versions. Please use the underscore name 'description_file' instead. 2025-09-08T11:28:51,699 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-08T11:28:51,699 or your builds will no longer be supported. 2025-09-08T11:28:51,699 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-08T11:28:51,699 ******************************************************************************** 2025-09-08T11:28:51,699 !! 2025-09-08T11:28:51,699 opt = self._enforce_underscore(opt, section) 2025-09-08T11:28:51,721 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T11:28:51,722 !! 2025-09-08T11:28:51,722 ******************************************************************************** 2025-09-08T11:28:51,722 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T11:28:51,722 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T11:28:51,722 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T11:28:51,722 or your builds will no longer be supported. 2025-09-08T11:28:51,722 ******************************************************************************** 2025-09-08T11:28:51,722 !! 2025-09-08T11:28:51,723 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T11:28:52,204 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-08T11:28:52,205 !! 2025-09-08T11:28:52,205 ******************************************************************************** 2025-09-08T11:28:52,205 Usage of dash-separated 'description-file' will not be supported in future 2025-09-08T11:28:52,205 versions. Please use the underscore name 'description_file' instead. 2025-09-08T11:28:52,205 (Affected: genomelake). 2025-09-08T11:28:52,205 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-08T11:28:52,205 or your builds will no longer be supported. 2025-09-08T11:28:52,205 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-08T11:28:52,206 ******************************************************************************** 2025-09-08T11:28:52,206 !! 2025-09-08T11:28:52,206 opt = self._enforce_underscore(opt, section) 2025-09-08T11:28:52,206 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T11:28:52,206 !! 2025-09-08T11:28:52,206 ******************************************************************************** 2025-09-08T11:28:52,206 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T11:28:52,207 License :: OSI Approved :: BSD License 2025-09-08T11:28:52,207 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T11:28:52,207 ******************************************************************************** 2025-09-08T11:28:52,207 !! 2025-09-08T11:28:52,207 self._finalize_license_expression() 2025-09-08T11:28:52,207 running bdist_wheel 2025-09-08T11:28:52,575 running build 2025-09-08T11:28:52,575 running build_py 2025-09-08T11:28:52,651 creating build/lib.linux-armv7l-cpython-313/genomelake 2025-09-08T11:28:52,652 copying genomelake/backend.py -> build/lib.linux-armv7l-cpython-313/genomelake 2025-09-08T11:28:52,652 copying genomelake/__init__.py -> build/lib.linux-armv7l-cpython-313/genomelake 2025-09-08T11:28:52,653 copying genomelake/extractors.py -> build/lib.linux-armv7l-cpython-313/genomelake 2025-09-08T11:28:52,654 running build_ext 2025-09-08T11:28:53,015 Compiling genomelake/util.pyx because it changed. 2025-09-08T11:28:53,015 [1/1] Cythonizing genomelake/util.pyx 2025-09-08T11:28:55,620 building 'genomelake.util' extension 2025-09-08T11:28:55,621 creating build/temp.linux-armv7l-cpython-313/genomelake 2025-09-08T11:28:55,621 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c genomelake/util.c -o build/temp.linux-armv7l-cpython-313/genomelake/util.o 2025-09-08T11:29:14,168 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/genomelake/util.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/genomelake/util.cpython-313-arm-linux-gnueabihf.so 2025-09-08T11:29:14,387 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-08T11:29:14,387 !! 2025-09-08T11:29:14,387 ******************************************************************************** 2025-09-08T11:29:14,387 Please avoid running ``setup.py`` directly. 2025-09-08T11:29:14,388 Instead, use pypa/build, pypa/installer or other 2025-09-08T11:29:14,388 standards-based tools. 2025-09-08T11:29:14,388 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T11:29:14,388 or your builds will no longer be supported. 2025-09-08T11:29:14,388 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-08T11:29:14,388 ******************************************************************************** 2025-09-08T11:29:14,388 !! 2025-09-08T11:29:14,389 self.initialize_options() 2025-09-08T11:29:14,460 installing to build/bdist.linux-armv7l/wheel 2025-09-08T11:29:14,460 running install 2025-09-08T11:29:14,483 running install_lib 2025-09-08T11:29:14,556 creating build/bdist.linux-armv7l/wheel 2025-09-08T11:29:14,557 creating build/bdist.linux-armv7l/wheel/genomelake 2025-09-08T11:29:14,557 copying build/lib.linux-armv7l-cpython-313/genomelake/util.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./genomelake 2025-09-08T11:29:14,561 copying build/lib.linux-armv7l-cpython-313/genomelake/extractors.py -> build/bdist.linux-armv7l/wheel/./genomelake 2025-09-08T11:29:14,561 copying build/lib.linux-armv7l-cpython-313/genomelake/__init__.py -> build/bdist.linux-armv7l/wheel/./genomelake 2025-09-08T11:29:14,562 copying build/lib.linux-armv7l-cpython-313/genomelake/backend.py -> build/bdist.linux-armv7l/wheel/./genomelake 2025-09-08T11:29:14,562 running install_egg_info 2025-09-08T11:29:14,637 running egg_info 2025-09-08T11:29:14,710 writing genomelake.egg-info/PKG-INFO 2025-09-08T11:29:14,711 writing dependency_links to genomelake.egg-info/dependency_links.txt 2025-09-08T11:29:14,712 writing requirements to genomelake.egg-info/requires.txt 2025-09-08T11:29:14,712 writing top-level names to genomelake.egg-info/top_level.txt 2025-09-08T11:29:14,786 reading manifest file 'genomelake.egg-info/SOURCES.txt' 2025-09-08T11:29:14,787 reading manifest template 'MANIFEST.in' 2025-09-08T11:29:14,789 warning: no previously-included files matching '__pycache__' found under directory '*' 2025-09-08T11:29:14,789 warning: no previously-included files matching '*.py[co]' found under directory '*' 2025-09-08T11:29:14,789 adding license file 'LICENSE' 2025-09-08T11:29:14,792 writing manifest file 'genomelake.egg-info/SOURCES.txt' 2025-09-08T11:29:14,792 Copying genomelake.egg-info to build/bdist.linux-armv7l/wheel/./genomelake-0.1.3-py3.13.egg-info 2025-09-08T11:29:14,794 running install_scripts 2025-09-08T11:29:14,844 creating build/bdist.linux-armv7l/wheel/genomelake-0.1.3.dist-info/WHEEL 2025-09-08T11:29:14,845 creating '/tmp/pip-wheel-mc25tkz2/genomelake-0.1.3-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-08T11:29:14,846 adding 'genomelake/__init__.py' 2025-09-08T11:29:14,847 adding 'genomelake/backend.py' 2025-09-08T11:29:14,847 adding 'genomelake/extractors.py' 2025-09-08T11:29:15,049 adding 'genomelake/util.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T11:29:15,056 adding 'genomelake-0.1.3.dist-info/licenses/LICENSE' 2025-09-08T11:29:15,057 adding 'genomelake-0.1.3.dist-info/METADATA' 2025-09-08T11:29:15,057 adding 'genomelake-0.1.3.dist-info/WHEEL' 2025-09-08T11:29:15,058 adding 'genomelake-0.1.3.dist-info/top_level.txt' 2025-09-08T11:29:15,059 adding 'genomelake-0.1.3.dist-info/RECORD' 2025-09-08T11:29:15,059 removing build/bdist.linux-armv7l/wheel 2025-09-08T11:29:15,498 Building wheel for genomelake (setup.py): finished with status 'done' 2025-09-08T11:29:15,503 Created wheel for genomelake: filename=genomelake-0.1.3-cp313-cp313-linux_armv7l.whl size=384864 sha256=b842159cdb80ec570febe471ff62e1048c1174435daad587209cd4af2f19f68f 2025-09-08T11:29:15,503 Stored in directory: /tmp/pip-ephem-wheel-cache-ye05rb5i/wheels/56/3e/19/893e746734525d36676ec7cdf2c304e213cdc54864dd43cbd0 2025-09-08T11:29:15,513 Successfully built genomelake 2025-09-08T11:29:15,516 Removed build tracker: '/tmp/pip-build-tracker-65k7whug'