2025-09-08T12:04:53,217 Created temporary directory: /tmp/pip-build-tracker-12zh0_9g 2025-09-08T12:04:53,217 Initialized build tracking at /tmp/pip-build-tracker-12zh0_9g 2025-09-08T12:04:53,218 Created build tracker: /tmp/pip-build-tracker-12zh0_9g 2025-09-08T12:04:53,218 Entered build tracker: /tmp/pip-build-tracker-12zh0_9g 2025-09-08T12:04:53,218 Created temporary directory: /tmp/pip-wheel-md8mrdd_ 2025-09-08T12:04:53,221 Created temporary directory: /tmp/pip-ephem-wheel-cache-dexdhtkq 2025-09-08T12:04:53,278 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T12:04:53,280 2 location(s) to search for versions of genomelake: 2025-09-08T12:04:53,280 * https://pypi.org/simple/genomelake/ 2025-09-08T12:04:53,280 * https://www.piwheels.org/simple/genomelake/ 2025-09-08T12:04:53,280 Fetching project page and analyzing links: https://pypi.org/simple/genomelake/ 2025-09-08T12:04:53,280 Getting page https://pypi.org/simple/genomelake/ 2025-09-08T12:04:53,282 Found index url https://pypi.org/simple/ 2025-09-08T12:04:53,350 Fetched page https://pypi.org/simple/genomelake/ as application/vnd.pypi.simple.v1+json 2025-09-08T12:04:53,352 Found link https://files.pythonhosted.org/packages/61/ff/e44bf090afa15196ab8b561fa006df736d03a9112614f613f097f5232b20/genomelake-0.1.1.tar.gz (from https://pypi.org/simple/genomelake/), version: 0.1.1 2025-09-08T12:04:53,352 Found link https://files.pythonhosted.org/packages/7f/a4/3d4211b0cf4ef57bb2103b37cfe8d0a4484f77d45bf5969fc02d2521fc4a/genomelake-0.1.2.tar.gz (from https://pypi.org/simple/genomelake/), version: 0.1.2 2025-09-08T12:04:53,352 Found link https://files.pythonhosted.org/packages/7d/2c/aadd37728e26d89dbbe47200d60d861b11e4416b707fa4ec16cf9e1f1141/genomelake-0.1.3.tar.gz (from https://pypi.org/simple/genomelake/), version: 0.1.3 2025-09-08T12:04:53,352 Found link https://files.pythonhosted.org/packages/07/f9/bfefaffe5478615f126704c385d0f38383d9dd912a65fb090eced83ba01e/genomelake-0.1.4.tar.gz (from https://pypi.org/simple/genomelake/), version: 0.1.4 2025-09-08T12:04:53,353 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomelake/ 2025-09-08T12:04:53,353 Getting page https://www.piwheels.org/simple/genomelake/ 2025-09-08T12:04:53,354 Found index url https://www.piwheels.org/simple/ 2025-09-08T12:04:53,454 Fetched page https://www.piwheels.org/simple/genomelake/ as text/html 2025-09-08T12:04:53,459 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp35-cp35m-linux_armv6l.whl#sha256=b35ed15acc4e85ba04ec2ac703cf11908334cd7504c4d9a970f390141ce70792 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,460 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp35-cp35m-linux_armv7l.whl#sha256=b35ed15acc4e85ba04ec2ac703cf11908334cd7504c4d9a970f390141ce70792 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,460 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp34-cp34m-linux_armv6l.whl#sha256=3e8e9e033a6878a9aa650031e494d0a06800065a30664ab6e4c0d9c0d71b2ed5 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,460 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp34-cp34m-linux_armv7l.whl#sha256=3e8e9e033a6878a9aa650031e494d0a06800065a30664ab6e4c0d9c0d71b2ed5 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,460 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp311-cp311-linux_armv6l.whl#sha256=0b734d5d818f6d45aa9dbfce10ceb62a58c06a974b84604b4d45c2727b0ceabf (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,460 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.4-cp311-cp311-linux_armv7l.whl#sha256=0b734d5d818f6d45aa9dbfce10ceb62a58c06a974b84604b4d45c2727b0ceabf (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,460 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp35-cp35m-linux_armv7l.whl#sha256=9ed8b9db2fff15d0ca3b9d45af6bc192143a4fe695e998f5b011e243fdd173d4 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,460 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp35-cp35m-linux_armv6l.whl#sha256=9ed8b9db2fff15d0ca3b9d45af6bc192143a4fe695e998f5b011e243fdd173d4 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,461 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp34-cp34m-linux_armv7l.whl#sha256=917ab7e24bc2ca06a3457720716996f18694e1738c89e46e17537af3bac3058e (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,461 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp34-cp34m-linux_armv6l.whl#sha256=917ab7e24bc2ca06a3457720716996f18694e1738c89e46e17537af3bac3058e (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,461 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp311-cp311-linux_armv6l.whl#sha256=0d977c467064bdfa99e4a508808aede09e5c51f1f1462c36bb8a50bf5b675d83 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,461 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.3-cp311-cp311-linux_armv7l.whl#sha256=0d977c467064bdfa99e4a508808aede09e5c51f1f1462c36bb8a50bf5b675d83 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,461 Skipping link: No binaries permitted for genomelake: https://www.piwheels.org/simple/genomelake/genomelake-0.1.3-cp313-cp313-linux_armv6l.whl#sha256=b842159cdb80ec570febe471ff62e1048c1174435daad587209cd4af2f19f68f (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,461 Skipping link: No binaries permitted for genomelake: https://www.piwheels.org/simple/genomelake/genomelake-0.1.3-cp313-cp313-linux_armv7l.whl#sha256=b842159cdb80ec570febe471ff62e1048c1174435daad587209cd4af2f19f68f (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,461 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp37-cp37m-linux_armv7l.whl#sha256=4f26d6e757f3111f433eebc6c6b96d36516ffdb5b5d965cf86ec98e9734e03fd (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,461 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp37-cp37m-linux_armv6l.whl#sha256=4f26d6e757f3111f433eebc6c6b96d36516ffdb5b5d965cf86ec98e9734e03fd (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,462 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=bfb10d510e2f76942f033126e00bea3a4d82beffacfb1d04a7a52a77b563b587 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,462 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=bfb10d510e2f76942f033126e00bea3a4d82beffacfb1d04a7a52a77b563b587 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,462 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp34-cp34m-linux_armv7l.whl#sha256=a4ddded13739145009abf8c74b2bf25cb2a00656d41dc6f18aabdfbcb832475c (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,462 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp34-cp34m-linux_armv6l.whl#sha256=a4ddded13739145009abf8c74b2bf25cb2a00656d41dc6f18aabdfbcb832475c (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,462 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp311-cp311-linux_armv6l.whl#sha256=1897df9c3426a8ba0a0e7bc78db595ad8dea1fecce89850071c233cdce4965f1 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,462 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp311-cp311-linux_armv7l.whl#sha256=1897df9c3426a8ba0a0e7bc78db595ad8dea1fecce89850071c233cdce4965f1 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,462 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp39-cp39-linux_armv6l.whl#sha256=28906610565412569a83928d28e306e87ebf215e4c7c121d808d803a7a7cba2d (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,462 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.2-cp39-cp39-linux_armv7l.whl#sha256=28906610565412569a83928d28e306e87ebf215e4c7c121d808d803a7a7cba2d (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,463 Skipping link: No binaries permitted for genomelake: https://www.piwheels.org/simple/genomelake/genomelake-0.1.2-cp313-cp313-linux_armv6l.whl#sha256=6ac2eb88fff7148456400eaa63d1c2353b68d0dec85d6855bc6159664e2a1533 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,463 Skipping link: No binaries permitted for genomelake: https://www.piwheels.org/simple/genomelake/genomelake-0.1.2-cp313-cp313-linux_armv7l.whl#sha256=6ac2eb88fff7148456400eaa63d1c2353b68d0dec85d6855bc6159664e2a1533 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,463 Skipping link: No binaries permitted for genomelake: https://archive1.piwheels.org/simple/genomelake/genomelake-0.1.1-py3-none-any.whl#sha256=d6f3505ca40cff1a6a5fc082478520661f061c716ab92ec605889e3b24c58ee8 (from https://www.piwheels.org/simple/genomelake/) 2025-09-08T12:04:53,463 Skipping link: not a file: https://www.piwheels.org/simple/genomelake/ 2025-09-08T12:04:53,463 Skipping link: not a file: https://pypi.org/simple/genomelake/ 2025-09-08T12:04:53,487 Given no hashes to check 1 links for project 'genomelake': discarding no candidates 2025-09-08T12:04:53,488 Collecting genomelake==0.1.4 2025-09-08T12:04:53,490 Created temporary directory: /tmp/pip-unpack-ubxtai4j 2025-09-08T12:04:53,628 Downloading genomelake-0.1.4.tar.gz (88 kB) 2025-09-08T12:04:53,680 Added genomelake==0.1.4 from https://files.pythonhosted.org/packages/07/f9/bfefaffe5478615f126704c385d0f38383d9dd912a65fb090eced83ba01e/genomelake-0.1.4.tar.gz to build tracker '/tmp/pip-build-tracker-12zh0_9g' 2025-09-08T12:04:53,681 Running setup.py (path:/tmp/pip-wheel-md8mrdd_/genomelake_8a1bee23be394478a32de6bd87130327/setup.py) egg_info for package genomelake 2025-09-08T12:04:53,681 Created temporary directory: /tmp/pip-pip-egg-info-7dpg3qzs 2025-09-08T12:04:53,681 Preparing metadata (setup.py): started 2025-09-08T12:04:53,682 Running command python setup.py egg_info 2025-09-08T12:04:54,283 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-08T12:04:54,283 !! 2025-09-08T12:04:54,283 ******************************************************************************** 2025-09-08T12:04:54,284 Usage of dash-separated 'description-file' will not be supported in future 2025-09-08T12:04:54,284 versions. Please use the underscore name 'description_file' instead. 2025-09-08T12:04:54,284 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-08T12:04:54,284 or your builds will no longer be supported. 2025-09-08T12:04:54,284 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-08T12:04:54,284 ******************************************************************************** 2025-09-08T12:04:54,284 !! 2025-09-08T12:04:54,285 opt = self._enforce_underscore(opt, section) 2025-09-08T12:04:54,308 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T12:04:54,308 !! 2025-09-08T12:04:54,309 ******************************************************************************** 2025-09-08T12:04:54,309 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T12:04:54,309 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T12:04:54,309 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T12:04:54,309 or your builds will no longer be supported. 2025-09-08T12:04:54,309 ******************************************************************************** 2025-09-08T12:04:54,309 !! 2025-09-08T12:04:54,309 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T12:04:54,851 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-08T12:04:54,851 !! 2025-09-08T12:04:54,851 ******************************************************************************** 2025-09-08T12:04:54,851 Usage of dash-separated 'description-file' will not be supported in future 2025-09-08T12:04:54,851 versions. Please use the underscore name 'description_file' instead. 2025-09-08T12:04:54,851 (Affected: genomelake). 2025-09-08T12:04:54,851 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-08T12:04:54,852 or your builds will no longer be supported. 2025-09-08T12:04:54,852 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-08T12:04:54,852 ******************************************************************************** 2025-09-08T12:04:54,852 !! 2025-09-08T12:04:54,852 opt = self._enforce_underscore(opt, section) 2025-09-08T12:04:54,852 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T12:04:54,852 !! 2025-09-08T12:04:54,852 ******************************************************************************** 2025-09-08T12:04:54,853 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T12:04:54,853 License :: OSI Approved :: BSD License 2025-09-08T12:04:54,853 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T12:04:54,853 ******************************************************************************** 2025-09-08T12:04:54,853 !! 2025-09-08T12:04:54,853 self._finalize_license_expression() 2025-09-08T12:04:54,926 running egg_info 2025-09-08T12:04:54,999 creating /tmp/pip-pip-egg-info-7dpg3qzs/genomelake.egg-info 2025-09-08T12:04:54,999 writing /tmp/pip-pip-egg-info-7dpg3qzs/genomelake.egg-info/PKG-INFO 2025-09-08T12:04:55,002 writing dependency_links to /tmp/pip-pip-egg-info-7dpg3qzs/genomelake.egg-info/dependency_links.txt 2025-09-08T12:04:55,003 writing requirements to /tmp/pip-pip-egg-info-7dpg3qzs/genomelake.egg-info/requires.txt 2025-09-08T12:04:55,004 writing top-level names to /tmp/pip-pip-egg-info-7dpg3qzs/genomelake.egg-info/top_level.txt 2025-09-08T12:04:55,004 writing manifest file '/tmp/pip-pip-egg-info-7dpg3qzs/genomelake.egg-info/SOURCES.txt' 2025-09-08T12:04:55,302 reading manifest file '/tmp/pip-pip-egg-info-7dpg3qzs/genomelake.egg-info/SOURCES.txt' 2025-09-08T12:04:55,303 reading manifest template 'MANIFEST.in' 2025-09-08T12:04:55,304 warning: no previously-included files matching '__pycache__' found under directory '*' 2025-09-08T12:04:55,305 warning: no previously-included files matching '*.py[co]' found under directory '*' 2025-09-08T12:04:55,305 adding license file 'LICENSE' 2025-09-08T12:04:55,307 writing manifest file '/tmp/pip-pip-egg-info-7dpg3qzs/genomelake.egg-info/SOURCES.txt' 2025-09-08T12:04:55,420 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T12:04:55,425 Source in /tmp/pip-wheel-md8mrdd_/genomelake_8a1bee23be394478a32de6bd87130327 has version 0.1.4, which satisfies requirement genomelake==0.1.4 from https://files.pythonhosted.org/packages/07/f9/bfefaffe5478615f126704c385d0f38383d9dd912a65fb090eced83ba01e/genomelake-0.1.4.tar.gz 2025-09-08T12:04:55,425 Removed genomelake==0.1.4 from https://files.pythonhosted.org/packages/07/f9/bfefaffe5478615f126704c385d0f38383d9dd912a65fb090eced83ba01e/genomelake-0.1.4.tar.gz from build tracker '/tmp/pip-build-tracker-12zh0_9g' 2025-09-08T12:04:55,431 Created temporary directory: /tmp/pip-unpack-ytk6abb_ 2025-09-08T12:04:55,431 Created temporary directory: /tmp/pip-unpack-1sm157b0 2025-09-08T12:04:55,431 Building wheels for collected packages: genomelake 2025-09-08T12:04:55,432 Created temporary directory: /tmp/pip-wheel-toy_0jbl 2025-09-08T12:04:55,433 DEPRECATION: Building 'genomelake' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'genomelake'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T12:04:55,434 Building wheel for genomelake (setup.py): started 2025-09-08T12:04:55,435 Destination directory: /tmp/pip-wheel-toy_0jbl 2025-09-08T12:04:55,435 Running command python setup.py bdist_wheel 2025-09-08T12:04:56,025 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-08T12:04:56,025 !! 2025-09-08T12:04:56,025 ******************************************************************************** 2025-09-08T12:04:56,025 Usage of dash-separated 'description-file' will not be supported in future 2025-09-08T12:04:56,025 versions. Please use the underscore name 'description_file' instead. 2025-09-08T12:04:56,026 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-08T12:04:56,026 or your builds will no longer be supported. 2025-09-08T12:04:56,026 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-08T12:04:56,026 ******************************************************************************** 2025-09-08T12:04:56,026 !! 2025-09-08T12:04:56,026 opt = self._enforce_underscore(opt, section) 2025-09-08T12:04:56,048 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T12:04:56,048 !! 2025-09-08T12:04:56,048 ******************************************************************************** 2025-09-08T12:04:56,048 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T12:04:56,049 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T12:04:56,049 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T12:04:56,049 or your builds will no longer be supported. 2025-09-08T12:04:56,049 ******************************************************************************** 2025-09-08T12:04:56,049 !! 2025-09-08T12:04:56,049 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T12:04:56,578 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-08T12:04:56,579 !! 2025-09-08T12:04:56,579 ******************************************************************************** 2025-09-08T12:04:56,579 Usage of dash-separated 'description-file' will not be supported in future 2025-09-08T12:04:56,579 versions. Please use the underscore name 'description_file' instead. 2025-09-08T12:04:56,579 (Affected: genomelake). 2025-09-08T12:04:56,579 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-08T12:04:56,579 or your builds will no longer be supported. 2025-09-08T12:04:56,580 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-08T12:04:56,580 ******************************************************************************** 2025-09-08T12:04:56,580 !! 2025-09-08T12:04:56,580 opt = self._enforce_underscore(opt, section) 2025-09-08T12:04:56,580 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T12:04:56,580 !! 2025-09-08T12:04:56,580 ******************************************************************************** 2025-09-08T12:04:56,580 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T12:04:56,581 License :: OSI Approved :: BSD License 2025-09-08T12:04:56,581 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T12:04:56,581 ******************************************************************************** 2025-09-08T12:04:56,581 !! 2025-09-08T12:04:56,581 self._finalize_license_expression() 2025-09-08T12:04:56,581 running bdist_wheel 2025-09-08T12:04:56,938 running build 2025-09-08T12:04:56,938 running build_py 2025-09-08T12:04:57,012 creating build/lib.linux-armv7l-cpython-313/genomelake 2025-09-08T12:04:57,013 copying genomelake/backend.py -> build/lib.linux-armv7l-cpython-313/genomelake 2025-09-08T12:04:57,013 copying genomelake/__init__.py -> build/lib.linux-armv7l-cpython-313/genomelake 2025-09-08T12:04:57,014 copying genomelake/extractors.py -> build/lib.linux-armv7l-cpython-313/genomelake 2025-09-08T12:04:57,015 running build_ext 2025-09-08T12:04:57,370 Compiling genomelake/util.pyx because it changed. 2025-09-08T12:04:57,370 [1/1] Cythonizing genomelake/util.pyx 2025-09-08T12:04:59,975 building 'genomelake.util' extension 2025-09-08T12:04:59,975 creating build/temp.linux-armv7l-cpython-313/genomelake 2025-09-08T12:04:59,976 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c genomelake/util.c -o build/temp.linux-armv7l-cpython-313/genomelake/util.o 2025-09-08T12:05:18,520 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/genomelake/util.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/genomelake/util.cpython-313-arm-linux-gnueabihf.so 2025-09-08T12:05:18,733 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-08T12:05:18,734 !! 2025-09-08T12:05:18,734 ******************************************************************************** 2025-09-08T12:05:18,734 Please avoid running ``setup.py`` directly. 2025-09-08T12:05:18,734 Instead, use pypa/build, pypa/installer or other 2025-09-08T12:05:18,734 standards-based tools. 2025-09-08T12:05:18,734 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T12:05:18,734 or your builds will no longer be supported. 2025-09-08T12:05:18,735 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-08T12:05:18,735 ******************************************************************************** 2025-09-08T12:05:18,735 !! 2025-09-08T12:05:18,735 self.initialize_options() 2025-09-08T12:05:18,808 installing to build/bdist.linux-armv7l/wheel 2025-09-08T12:05:18,808 running install 2025-09-08T12:05:18,831 running install_lib 2025-09-08T12:05:18,902 creating build/bdist.linux-armv7l/wheel 2025-09-08T12:05:18,903 creating build/bdist.linux-armv7l/wheel/genomelake 2025-09-08T12:05:18,903 copying build/lib.linux-armv7l-cpython-313/genomelake/util.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./genomelake 2025-09-08T12:05:18,907 copying build/lib.linux-armv7l-cpython-313/genomelake/extractors.py -> build/bdist.linux-armv7l/wheel/./genomelake 2025-09-08T12:05:18,907 copying build/lib.linux-armv7l-cpython-313/genomelake/__init__.py -> build/bdist.linux-armv7l/wheel/./genomelake 2025-09-08T12:05:18,908 copying build/lib.linux-armv7l-cpython-313/genomelake/backend.py -> build/bdist.linux-armv7l/wheel/./genomelake 2025-09-08T12:05:18,908 running install_egg_info 2025-09-08T12:05:18,981 running egg_info 2025-09-08T12:05:19,054 writing genomelake.egg-info/PKG-INFO 2025-09-08T12:05:19,057 writing dependency_links to genomelake.egg-info/dependency_links.txt 2025-09-08T12:05:19,059 writing requirements to genomelake.egg-info/requires.txt 2025-09-08T12:05:19,059 writing top-level names to genomelake.egg-info/top_level.txt 2025-09-08T12:05:19,133 reading manifest file 'genomelake.egg-info/SOURCES.txt' 2025-09-08T12:05:19,134 reading manifest template 'MANIFEST.in' 2025-09-08T12:05:19,136 warning: no previously-included files matching '__pycache__' found under directory '*' 2025-09-08T12:05:19,136 warning: no previously-included files matching '*.py[co]' found under directory '*' 2025-09-08T12:05:19,136 adding license file 'LICENSE' 2025-09-08T12:05:19,139 writing manifest file 'genomelake.egg-info/SOURCES.txt' 2025-09-08T12:05:19,139 Copying genomelake.egg-info to build/bdist.linux-armv7l/wheel/./genomelake-0.1.4-py3.13.egg-info 2025-09-08T12:05:19,141 running install_scripts 2025-09-08T12:05:19,191 creating build/bdist.linux-armv7l/wheel/genomelake-0.1.4.dist-info/WHEEL 2025-09-08T12:05:19,192 creating '/tmp/pip-wheel-toy_0jbl/genomelake-0.1.4-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-08T12:05:19,193 adding 'genomelake/__init__.py' 2025-09-08T12:05:19,194 adding 'genomelake/backend.py' 2025-09-08T12:05:19,195 adding 'genomelake/extractors.py' 2025-09-08T12:05:19,407 adding 'genomelake/util.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T12:05:19,414 adding 'genomelake-0.1.4.dist-info/licenses/LICENSE' 2025-09-08T12:05:19,415 adding 'genomelake-0.1.4.dist-info/METADATA' 2025-09-08T12:05:19,416 adding 'genomelake-0.1.4.dist-info/WHEEL' 2025-09-08T12:05:19,416 adding 'genomelake-0.1.4.dist-info/top_level.txt' 2025-09-08T12:05:19,417 adding 'genomelake-0.1.4.dist-info/RECORD' 2025-09-08T12:05:19,417 removing build/bdist.linux-armv7l/wheel 2025-09-08T12:05:19,852 Building wheel for genomelake (setup.py): finished with status 'done' 2025-09-08T12:05:19,857 Created wheel for genomelake: filename=genomelake-0.1.4-cp313-cp313-linux_armv7l.whl size=384868 sha256=e05b9c2ecf3f65e91a60d211ba2b46feadbe8b0812e97e4a9ef09beff912ef50 2025-09-08T12:05:19,858 Stored in directory: /tmp/pip-ephem-wheel-cache-dexdhtkq/wheels/6a/05/42/01275af0157f4e8cdfa1add9de1747491d8a335673c0b0699d 2025-09-08T12:05:19,868 Successfully built genomelake 2025-09-08T12:05:19,871 Removed build tracker: '/tmp/pip-build-tracker-12zh0_9g'