2025-09-08T12:25:10,212 Created temporary directory: /tmp/pip-build-tracker-9obldxg4 2025-09-08T12:25:10,213 Initialized build tracking at /tmp/pip-build-tracker-9obldxg4 2025-09-08T12:25:10,213 Created build tracker: /tmp/pip-build-tracker-9obldxg4 2025-09-08T12:25:10,213 Entered build tracker: /tmp/pip-build-tracker-9obldxg4 2025-09-08T12:25:10,213 Created temporary directory: /tmp/pip-wheel-09nngwtu 2025-09-08T12:25:10,216 Created temporary directory: /tmp/pip-ephem-wheel-cache-pvy21i8a 2025-09-08T12:25:10,275 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T12:25:10,277 2 location(s) to search for versions of mikado: 2025-09-08T12:25:10,277 * https://pypi.org/simple/mikado/ 2025-09-08T12:25:10,277 * https://www.piwheels.org/simple/mikado/ 2025-09-08T12:25:10,277 Fetching project page and analyzing links: https://pypi.org/simple/mikado/ 2025-09-08T12:25:10,278 Getting page https://pypi.org/simple/mikado/ 2025-09-08T12:25:10,279 Found index url https://pypi.org/simple/ 2025-09-08T12:25:10,347 Fetched page https://pypi.org/simple/mikado/ as application/vnd.pypi.simple.v1+json 2025-09-08T12:25:10,350 Found link https://files.pythonhosted.org/packages/e0/9f/c6c5da77e4164c37427bc069d92e83c8269cdf779a43501403ae837a24b3/Mikado-1.0.0b5.post1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b5.post1 2025-09-08T12:25:10,350 Found link https://files.pythonhosted.org/packages/8f/6c/ee9884cd930db5bfbee812ad1592a32127edbedf01cf28713eda06d5a9b1/Mikado-1.0.0b9.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b9 2025-09-08T12:25:10,351 Found link https://files.pythonhosted.org/packages/7d/c9/edc669907250923ca1113fa140d1965eb25691f57aaff891642d34aaf217/Mikado-1.0.0b10.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b10 2025-09-08T12:25:10,351 Found link https://files.pythonhosted.org/packages/69/15/3551e2856f041aefdd1505656aa8af26b1af04f8e1b4c0448f133724e1f4/Mikado-1.0.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0 2025-09-08T12:25:10,351 Found link https://files.pythonhosted.org/packages/c2/b9/41d0a6f2ebad5eab5bc183beca8de854b4187266c6674ae6da0d86053f63/Mikado-1.1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.1 2025-09-08T12:25:10,351 Found link https://files.pythonhosted.org/packages/40/3d/1158abded48d747b982a77c1badd0d718a174470cdecde82a313f3eb9d4f/Mikado-1.2.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2 2025-09-08T12:25:10,352 Found link https://files.pythonhosted.org/packages/9a/07/5d0790de2c40a36826ac078bf4f7bf62e1fd5848411a784e7eef9fd673c4/Mikado-1.2.1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.1 2025-09-08T12:25:10,352 Found link https://files.pythonhosted.org/packages/35/a8/73f0dfa3062e3744b27ba7dd4c0bfc6af9b23da38c4c0ce8c7d5b27b0757/Mikado-1.2.2.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.2 2025-09-08T12:25:10,352 Skipping link: No binaries permitted for mikado: https://files.pythonhosted.org/packages/f6/7f/d791fd6b5667bf18f4e167803a05fe5c389722ca954dea524259e08121e1/Mikado-1.2.4-cp36-cp36m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/mikado/) 2025-09-08T12:25:10,352 Found link https://files.pythonhosted.org/packages/fc/2d/cc88561deaa5c1b4425855cd821253c68353ed787c7c63dc0f4ea155927e/Mikado-1.2.4.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.4 2025-09-08T12:25:10,352 Found link https://files.pythonhosted.org/packages/36/12/08d60892041a13f4bd13a486fb510844a8ed99961df828e7509e394904e6/Mikado-2.0rc1.tar.gz (from https://pypi.org/simple/mikado/), version: 2.0rc1 2025-09-08T12:25:10,353 Found link https://files.pythonhosted.org/packages/ba/bf/b9a01f43d67eacafe2deea77708497e8523b9cbc9c08d1da4bade64fdb99/Mikado-2.0rc2.tar.gz (from https://pypi.org/simple/mikado/), version: 2.0rc2 2025-09-08T12:25:10,353 Found link https://files.pythonhosted.org/packages/86/6d/f8b099f9637b38fd94c3f164f2c996765b579d2eae62cda48a04f108edb1/Mikado-2.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0 2025-09-08T12:25:10,354 Found link https://files.pythonhosted.org/packages/2e/33/25f4ffb7a3fb20eb2d68ebbb4547dc7c2a26f6c5576a29cca8ba3981a753/Mikado-2.0.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0.1 2025-09-08T12:25:10,354 Found link https://files.pythonhosted.org/packages/3a/6e/c589e961b797498aa99fe23634edda75166679cd2a381b0354a2d1d7b46f/Mikado-2.0.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0.2 2025-09-08T12:25:10,354 Found link https://files.pythonhosted.org/packages/96/ff/815427acc6fb277fe387f6bf7509ad8e374be65f557bbf1f8c7741b21e02/Mikado-2.1.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.1.0 2025-09-08T12:25:10,354 Found link https://files.pythonhosted.org/packages/13/49/571306c6f821dc029a1cb70472498bd9d25525d126f2084798a774f9e4ce/Mikado-2.1.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.1.1 2025-09-08T12:25:10,354 Found link https://files.pythonhosted.org/packages/88/25/93f4d40e98702547602916000e9e8dee101c4e072c29306fcbf9cb6a0797/Mikado-2.2.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.0 2025-09-08T12:25:10,355 Found link https://files.pythonhosted.org/packages/f5/4a/ea11bafcbd376966836c1a70d6500fc63839fe529e8d103df8771057750a/Mikado-2.2.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.1 2025-09-08T12:25:10,355 Found link https://files.pythonhosted.org/packages/d0/ba/88df54116a8a68de82bd668d6fa2189d4a26045b7e0437cdc50bfccf7002/Mikado-2.2.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.2 2025-09-08T12:25:10,355 Found link https://files.pythonhosted.org/packages/28/dd/dec1ae4c7519971dc80a780dde045fce221adffba00535e3ff26de7c29ba/Mikado-2.2.3.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.3 2025-09-08T12:25:10,356 Found link https://files.pythonhosted.org/packages/26/c2/021f128fc8733aa031191d140d26c992a0f62dbd0f974913c7245f208bcf/Mikado-2.2.4.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.2.4 2025-09-08T12:25:10,356 Found link https://files.pythonhosted.org/packages/30/57/69347e6f46b8845741045f2782a5f59bd1a650167bb6be3ddbd38c8c73c5/Mikado-2.2.5.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.2.5 2025-09-08T12:25:10,356 Found link https://files.pythonhosted.org/packages/09/d8/c98c1549bcbb7f37b93d69625d4228b6b6a29a0676e9dece16e3a6061ff6/Mikado-2.3.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.0 2025-09-08T12:25:10,356 Found link https://files.pythonhosted.org/packages/8c/7c/70149e3cca2d6e50f302d7615728ecaade107420be6c7f6b52d2c89135b1/Mikado-2.3.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.1 2025-09-08T12:25:10,357 Found link https://files.pythonhosted.org/packages/d1/90/5867a6616f873700d9bd599edbfefe142307d1c0dcefb02f8106bed2794d/Mikado-2.3.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.2 2025-09-08T12:25:10,357 Found link https://files.pythonhosted.org/packages/37/09/898b9cc9c310317368a4a0a71f818fab51a1f7bea5eee895284036116321/Mikado-2.3.3.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.3 2025-09-08T12:25:10,357 Found link https://files.pythonhosted.org/packages/7c/53/cbd94a6419cb6b85fe392f5e82b2270567a7f3fd3cf381f54f9bd080d4b0/Mikado-2.3.4.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.4 2025-09-08T12:25:10,357 Fetching project page and analyzing links: https://www.piwheels.org/simple/mikado/ 2025-09-08T12:25:10,358 Getting page https://www.piwheels.org/simple/mikado/ 2025-09-08T12:25:10,359 Found index url https://www.piwheels.org/simple/ 2025-09-08T12:25:10,457 Fetched page https://www.piwheels.org/simple/mikado/ as text/html 2025-09-08T12:25:10,490 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp39-cp39-linux_armv6l.whl#sha256=eae7460c0e91feef77b9891ab838d346e9149481f59d271ace65691fd3fab322 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,490 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp39-cp39-linux_armv7l.whl#sha256=eae7460c0e91feef77b9891ab838d346e9149481f59d271ace65691fd3fab322 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,490 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp37-cp37m-linux_armv6l.whl#sha256=d200ed2b907ce98c298ab164a11c61552acec54fed7a727d944b8744bc9c87a5 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,490 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp37-cp37m-linux_armv7l.whl#sha256=d200ed2b907ce98c298ab164a11c61552acec54fed7a727d944b8744bc9c87a5 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,491 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp37-cp37m-linux_armv6l.whl#sha256=b860c76dd2aff5fb774ebbede86a08d05ca2bcc32e188e0a8fc6b3392e132b55 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,491 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp37-cp37m-linux_armv7l.whl#sha256=b860c76dd2aff5fb774ebbede86a08d05ca2bcc32e188e0a8fc6b3392e132b55 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,491 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp39-cp39-linux_armv6l.whl#sha256=8ae20fd6fa9134eaf3b4216aafe499dd03d080f1338d465f819e529b9448178b (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,491 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp39-cp39-linux_armv7l.whl#sha256=8ae20fd6fa9134eaf3b4216aafe499dd03d080f1338d465f819e529b9448178b (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,491 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp37-cp37m-linux_armv6l.whl#sha256=0962ee8458a1d2c09e44acbf646c97dfbbaacb80b1cbc5e1e6546bc3175e9c6c (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,491 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp37-cp37m-linux_armv7l.whl#sha256=0962ee8458a1d2c09e44acbf646c97dfbbaacb80b1cbc5e1e6546bc3175e9c6c (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,491 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp39-cp39-linux_armv6l.whl#sha256=3ee48fa3d96deeb9e0a99617a0e99dca88fb69d47078393f8caa1f08fa35ce8a (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,492 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp39-cp39-linux_armv7l.whl#sha256=3ee48fa3d96deeb9e0a99617a0e99dca88fb69d47078393f8caa1f08fa35ce8a (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,492 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp37-cp37m-linux_armv6l.whl#sha256=fc848e6322df2e3611ca3722bcee0981f195f667bf874a7c6dcea0f9dc0ab731 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,492 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp37-cp37m-linux_armv7l.whl#sha256=fc848e6322df2e3611ca3722bcee0981f195f667bf874a7c6dcea0f9dc0ab731 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,492 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp39-cp39-linux_armv6l.whl#sha256=a38312d4ddc4abf2c34c1de984f3023e216cbaa455158a856480ae4d8e68c745 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,492 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp39-cp39-linux_armv7l.whl#sha256=a38312d4ddc4abf2c34c1de984f3023e216cbaa455158a856480ae4d8e68c745 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,492 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp37-cp37m-linux_armv6l.whl#sha256=4e8abcc783b98e290382b8ec0ee7f385c27700d5a9c1841a7bcae3ea507170a0 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,492 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp37-cp37m-linux_armv7l.whl#sha256=4e8abcc783b98e290382b8ec0ee7f385c27700d5a9c1841a7bcae3ea507170a0 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,493 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp39-cp39-linux_armv6l.whl#sha256=a041f4538b689653924bc0c7bdd03bb29fdda8143a60434de6e2d63aa67cd0c8 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,493 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp39-cp39-linux_armv7l.whl#sha256=a041f4538b689653924bc0c7bdd03bb29fdda8143a60434de6e2d63aa67cd0c8 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,493 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp37-cp37m-linux_armv6l.whl#sha256=5c409502210a8aefb7de44b86fb2ea2a309b92b91226e6b13d4d54725d171baf (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,493 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp37-cp37m-linux_armv7l.whl#sha256=5c409502210a8aefb7de44b86fb2ea2a309b92b91226e6b13d4d54725d171baf (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,493 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp39-cp39-linux_armv6l.whl#sha256=3f743cbc61207059885fe9a59589bf602a3f90a29738ac52092067a0e6422a50 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,493 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp39-cp39-linux_armv7l.whl#sha256=3f743cbc61207059885fe9a59589bf602a3f90a29738ac52092067a0e6422a50 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,493 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp37-cp37m-linux_armv6l.whl#sha256=0754ca2b8f81fbd6eb9ff228073ae59a24073e3f1b7b4ec29b0d65a71e0370a7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,494 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp37-cp37m-linux_armv7l.whl#sha256=0754ca2b8f81fbd6eb9ff228073ae59a24073e3f1b7b4ec29b0d65a71e0370a7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,494 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp39-cp39-linux_armv6l.whl#sha256=867f03bfe6e9cf06e29820272b9f451f30462c4287ebaebebe24b3ee358be321 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,494 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp39-cp39-linux_armv7l.whl#sha256=867f03bfe6e9cf06e29820272b9f451f30462c4287ebaebebe24b3ee358be321 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T12:25:10,494 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.3-cp37-cp37m-linux_armv6l.whl#sha256=0ca20e373c9e6bb78e52fcc63bd76ce297019dc0398a342552de37e05393ec0d (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T12:25:10,494 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,500 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc2-cp39-cp39-linux_armv7l.whl#sha256=27d920e52482eb28c4c4915cd13022c57b6a2e9b24ab9cbb9c6fb84a57c86006 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,500 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc1-cp35-cp35m-linux_armv6l.whl#sha256=f0c146400dbcde6c6b2b4691d3519ee99863e2f9a5a53473bb658567431c4e58 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,500 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc1-cp35-cp35m-linux_armv7l.whl#sha256=f0c146400dbcde6c6b2b4691d3519ee99863e2f9a5a53473bb658567431c4e58 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,500 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,501 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp34-cp34m-linux_armv6l.whl#sha256=013fe7312e89e4ef0a1cefc59efd6deded6fe09a82e2684638461eefc0d15cec (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,501 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp34-cp34m-linux_armv7l.whl#sha256=013fe7312e89e4ef0a1cefc59efd6deded6fe09a82e2684638461eefc0d15cec (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,501 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp35-cp35m-linux_armv7l.whl#sha256=70805f9e31cbe895eb764eccf40b81eb7dbc61a65ff199ddbefdebde920c1447 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,501 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,502 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp311-cp311-linux_armv7l.whl#sha256=f046bdaea4a2cf6889ea15964c360551b58427311379d68e8d438b673e4f4d97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,502 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp35-cp35m-linux_armv6l.whl#sha256=6e1e51e81057df0e2d693c84b108c9fc11c0b43b8f11118797d73d7838a9eb6d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,502 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp35-cp35m-linux_armv7l.whl#sha256=6e1e51e81057df0e2d693c84b108c9fc11c0b43b8f11118797d73d7838a9eb6d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,502 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp37-cp37m-linux_armv7l.whl#sha256=61a7b7c61f8476136a43f64ff77f3eedf70a72ac480343a833472539bb9be86a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,502 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp37-cp37m-linux_armv6l.whl#sha256=61a7b7c61f8476136a43f64ff77f3eedf70a72ac480343a833472539bb9be86a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,503 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp311-cp311-linux_armv6l.whl#sha256=69c57b0a7e661700c4d7c775e26f5acf8fc27f2732d78c6325ecbf52106b4225 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,503 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp311-cp311-linux_armv7l.whl#sha256=69c57b0a7e661700c4d7c775e26f5acf8fc27f2732d78c6325ecbf52106b4225 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,503 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp34-cp34m-linux_armv7l.whl#sha256=6302e3b12807435d38dfd802e1b8dc983feb6cea1b55db4e480aec539a5f85bc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,503 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp34-cp34m-linux_armv6l.whl#sha256=6302e3b12807435d38dfd802e1b8dc983feb6cea1b55db4e480aec539a5f85bc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,503 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp35-cp35m-linux_armv6l.whl#sha256=a39e49d25153534bd5c1e6574e84ed72e6814b12ed39527b7e329221e6f1b13d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,503 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp35-cp35m-linux_armv7l.whl#sha256=a39e49d25153534bd5c1e6574e84ed72e6814b12ed39527b7e329221e6f1b13d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,503 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=a2910227f92bec48ad32c61c404cd1b8637bede7fbd684ae3d64df57bbe5ac7b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,504 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=a2910227f92bec48ad32c61c404cd1b8637bede7fbd684ae3d64df57bbe5ac7b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,504 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=02f84927b3a911dd345525ca16e3ca1e880528ab03a545543f33a9cfb49c5f4e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,504 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=02f84927b3a911dd345525ca16e3ca1e880528ab03a545543f33a9cfb49c5f4e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,504 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2.1-cp313-cp313-linux_armv6l.whl#sha256=c0fc68d1c17cc21df85983efdc5535fbb687578f4bcf3287212e41d53d625bb9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,504 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2.1-cp313-cp313-linux_armv7l.whl#sha256=c0fc68d1c17cc21df85983efdc5535fbb687578f4bcf3287212e41d53d625bb9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,504 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp35-cp35m-linux_armv7l.whl#sha256=dae54e57e5b7f3185e90e47fa278840a38f8c98d49a7a337b29951bec33ece13 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,504 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp35-cp35m-linux_armv6l.whl#sha256=dae54e57e5b7f3185e90e47fa278840a38f8c98d49a7a337b29951bec33ece13 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,505 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp34-cp34m-linux_armv6l.whl#sha256=4bb34a1ae37485284a0661c2a6a7f1094636a0372a859dcd87d7c0aad94c91cd (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,505 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp34-cp34m-linux_armv7l.whl#sha256=4bb34a1ae37485284a0661c2a6a7f1094636a0372a859dcd87d7c0aad94c91cd (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,505 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp37-cp37m-linux_armv6l.whl#sha256=5a5abadadc716ff22023b6f44b03a9e8049fac6667df41dbf611f0597708a9b7 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,505 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp37-cp37m-linux_armv7l.whl#sha256=5a5abadadc716ff22023b6f44b03a9e8049fac6667df41dbf611f0597708a9b7 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,505 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp311-cp311-linux_armv6l.whl#sha256=8cb994b5e0b5076b40fd77ebadda7a599cb19d680ca175eba47f43e372701c97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,505 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp311-cp311-linux_armv7l.whl#sha256=8cb994b5e0b5076b40fd77ebadda7a599cb19d680ca175eba47f43e372701c97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,505 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp39-cp39-linux_armv6l.whl#sha256=dfcb87da8afbf3806c9ba6ac00eb3fcc32717eecd66839e3981624e0c83102b9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,506 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp39-cp39-linux_armv7l.whl#sha256=dfcb87da8afbf3806c9ba6ac00eb3fcc32717eecd66839e3981624e0c83102b9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,506 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2-cp313-cp313-linux_armv6l.whl#sha256=b63a957bbb27cd561f5370b31d5c05479d9eb8d059d348d126bf884f10ca2121 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,506 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2-cp313-cp313-linux_armv7l.whl#sha256=b63a957bbb27cd561f5370b31d5c05479d9eb8d059d348d126bf884f10ca2121 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,506 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp34-cp34m-linux_armv6l.whl#sha256=ad148a2be64148656d9fd55c8a2767fb7b93b5c4f225dd7f44bc45c779afe4ca (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,506 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp34-cp34m-linux_armv7l.whl#sha256=ad148a2be64148656d9fd55c8a2767fb7b93b5c4f225dd7f44bc45c779afe4ca (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,506 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,507 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.1-cp313-cp313-linux_armv6l.whl#sha256=cc5aaceaf7fdd95eaabce55d720dfd1f5d3fbcd4d6c286fe1159d54cd58aee5b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,507 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.1-cp313-cp313-linux_armv7l.whl#sha256=cc5aaceaf7fdd95eaabce55d720dfd1f5d3fbcd4d6c286fe1159d54cd58aee5b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,507 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp35-cp35m-linux_armv7l.whl#sha256=a8d63c41eb54392f132fadff33c5b18e9f67778562711eb50caa98dcbe7f1f84 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,507 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,508 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0-cp313-cp313-linux_armv7l.whl#sha256=7b05ef72b23835adf1757bbd0efb0cd8d5f5e3f9b505e72a913aef68936edead (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,508 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp35-cp35m-linux_armv7l.whl#sha256=5efcb4a1b4a9e814f31e3ac913e4debb0c7eb4eb35328f9c1a7044a7d919efdc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,508 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp35-cp35m-linux_armv6l.whl#sha256=5efcb4a1b4a9e814f31e3ac913e4debb0c7eb4eb35328f9c1a7044a7d919efdc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,508 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,509 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp35-cp35m-linux_armv7l.whl#sha256=20c5fe322f4783bf164ebe1856a68d1f05890b4df93d62a91e5a403942d99a08 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,509 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp35-cp35m-linux_armv6l.whl#sha256=20c5fe322f4783bf164ebe1856a68d1f05890b4df93d62a91e5a403942d99a08 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,509 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp311-cp311-linux_armv6l.whl#sha256=ed7e4964520403c9d79c191483d7a3d9ad8e0b35b77eae60f39cd0f1b5d70b0e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,509 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp311-cp311-linux_armv7l.whl#sha256=ed7e4964520403c9d79c191483d7a3d9ad8e0b35b77eae60f39cd0f1b5d70b0e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,509 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b9-cp313-cp313-linux_armv6l.whl#sha256=feed0441e01e5ed6abdde5aa63f32d8938e0f4396312cde18b80a225e942fe6a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,510 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b9-cp313-cp313-linux_armv7l.whl#sha256=feed0441e01e5ed6abdde5aa63f32d8938e0f4396312cde18b80a225e942fe6a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,510 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp35-cp35m-linux_armv7l.whl#sha256=e42650c477a2db9d73486fb0c1ea7183280ccd2d216a8994a4620148d1208b6b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,510 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp35-cp35m-linux_armv6l.whl#sha256=e42650c477a2db9d73486fb0c1ea7183280ccd2d216a8994a4620148d1208b6b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,510 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp37-cp37m-linux_armv7l.whl#sha256=ad15eb4f2ea89eef0f6fdfacdacafc0005a9554e350cc2e9da31cc8512dfdb15 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,510 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp37-cp37m-linux_armv6l.whl#sha256=ad15eb4f2ea89eef0f6fdfacdacafc0005a9554e350cc2e9da31cc8512dfdb15 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,510 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp311-cp311-linux_armv6l.whl#sha256=bf8598c676e5ac37decb6a90621ec401e89b7791374e961d544d8f1a924a317e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,510 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp311-cp311-linux_armv7l.whl#sha256=bf8598c676e5ac37decb6a90621ec401e89b7791374e961d544d8f1a924a317e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,511 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b5.post1-cp313-cp313-linux_armv6l.whl#sha256=a484381081c56e7106e45ed0d641845f6c7386588a9564360e66d4259c2a30c2 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,511 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b5.post1-cp313-cp313-linux_armv7l.whl#sha256=a484381081c56e7106e45ed0d641845f6c7386588a9564360e66d4259c2a30c2 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T12:25:10,511 Skipping link: not a file: https://www.piwheels.org/simple/mikado/ 2025-09-08T12:25:10,511 Skipping link: not a file: https://pypi.org/simple/mikado/ 2025-09-08T12:25:10,535 Given no hashes to check 1 links for project 'mikado': discarding no candidates 2025-09-08T12:25:10,536 Collecting mikado==1.2.2 2025-09-08T12:25:10,537 Created temporary directory: /tmp/pip-unpack-rbkh1d7d 2025-09-08T12:25:10,814 Downloading Mikado-1.2.2.tar.gz (22.1 MB) 2025-09-08T12:25:15,857 Added mikado==1.2.2 from https://files.pythonhosted.org/packages/35/a8/73f0dfa3062e3744b27ba7dd4c0bfc6af9b23da38c4c0ce8c7d5b27b0757/Mikado-1.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-9obldxg4' 2025-09-08T12:25:15,858 Running setup.py (path:/tmp/pip-wheel-09nngwtu/mikado_ad3862d7f6fd4184b7983d6675aa7283/setup.py) egg_info for package mikado 2025-09-08T12:25:15,858 Created temporary directory: /tmp/pip-pip-egg-info-aeeji5ql 2025-09-08T12:25:15,858 Preparing metadata (setup.py): started 2025-09-08T12:25:15,859 Running command python setup.py egg_info 2025-09-08T12:25:19,076 Compiling Mikado/utilities/overlap.pyx because it changed. 2025-09-08T12:25:19,076 Compiling Mikado/scales/f1.pyx because it changed. 2025-09-08T12:25:19,076 Compiling Mikado/scales/contrast.pyx because it changed. 2025-09-08T12:25:19,076 Compiling Mikado/utilities/intervaltree.pyx because it changed. 2025-09-08T12:25:19,076 [1/4] Cythonizing Mikado/scales/contrast.pyx 2025-09-08T12:25:19,077 [2/4] Cythonizing Mikado/scales/f1.pyx 2025-09-08T12:25:19,077 [3/4] Cythonizing Mikado/utilities/intervaltree.pyx 2025-09-08T12:25:19,077 [4/4] Cythonizing Mikado/utilities/overlap.pyx 2025-09-08T12:25:19,255 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T12:25:19,255 warnings.warn(msg) 2025-09-08T12:25:19,480 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T12:25:19,480 !! 2025-09-08T12:25:19,480 ******************************************************************************** 2025-09-08T12:25:19,480 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T12:25:19,480 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T12:25:19,481 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T12:25:19,481 ******************************************************************************** 2025-09-08T12:25:19,481 !! 2025-09-08T12:25:19,481 self._finalize_license_expression() 2025-09-08T12:25:19,557 running egg_info 2025-09-08T12:25:19,634 creating /tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info 2025-09-08T12:25:19,634 writing /tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info/PKG-INFO 2025-09-08T12:25:19,638 writing dependency_links to /tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info/dependency_links.txt 2025-09-08T12:25:19,639 writing entry points to /tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info/entry_points.txt 2025-09-08T12:25:19,642 writing requirements to /tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info/requires.txt 2025-09-08T12:25:19,643 writing top-level names to /tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info/top_level.txt 2025-09-08T12:25:19,643 writing manifest file '/tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info/SOURCES.txt' 2025-09-08T12:25:20,026 reading manifest file '/tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info/SOURCES.txt' 2025-09-08T12:25:20,027 reading manifest template 'MANIFEST.in' 2025-09-08T12:25:20,252 warning: no previously-included files matching '*' found under directory 'docs' 2025-09-08T12:25:20,253 adding license file 'AUTHORS' 2025-09-08T12:25:20,316 writing manifest file '/tmp/pip-pip-egg-info-aeeji5ql/Mikado.egg-info/SOURCES.txt' 2025-09-08T12:25:20,629 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T12:25:20,634 Source in /tmp/pip-wheel-09nngwtu/mikado_ad3862d7f6fd4184b7983d6675aa7283 has version 1.2.2, which satisfies requirement mikado==1.2.2 from https://files.pythonhosted.org/packages/35/a8/73f0dfa3062e3744b27ba7dd4c0bfc6af9b23da38c4c0ce8c7d5b27b0757/Mikado-1.2.2.tar.gz 2025-09-08T12:25:20,634 Removed mikado==1.2.2 from https://files.pythonhosted.org/packages/35/a8/73f0dfa3062e3744b27ba7dd4c0bfc6af9b23da38c4c0ce8c7d5b27b0757/Mikado-1.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-9obldxg4' 2025-09-08T12:25:20,645 Created temporary directory: /tmp/pip-unpack-_3ih_056 2025-09-08T12:25:20,645 Created temporary directory: /tmp/pip-unpack-yt2bw8vb 2025-09-08T12:25:20,645 Building wheels for collected packages: mikado 2025-09-08T12:25:20,646 Created temporary directory: /tmp/pip-wheel-yofgn9ax 2025-09-08T12:25:20,647 DEPRECATION: Building 'mikado' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'mikado'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T12:25:20,648 Building wheel for mikado (setup.py): started 2025-09-08T12:25:20,648 Destination directory: /tmp/pip-wheel-yofgn9ax 2025-09-08T12:25:20,649 Running command python setup.py bdist_wheel 2025-09-08T12:25:21,842 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T12:25:21,842 warnings.warn(msg) 2025-09-08T12:25:22,058 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T12:25:22,058 !! 2025-09-08T12:25:22,058 ******************************************************************************** 2025-09-08T12:25:22,058 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T12:25:22,059 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T12:25:22,059 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T12:25:22,059 ******************************************************************************** 2025-09-08T12:25:22,059 !! 2025-09-08T12:25:22,059 self._finalize_license_expression() 2025-09-08T12:25:22,060 running bdist_wheel 2025-09-08T12:25:22,420 running build 2025-09-08T12:25:22,420 running build_py 2025-09-08T12:25:22,495 creating build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T12:25:22,495 copying Mikado/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T12:25:22,496 copying Mikado/version.py -> build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T12:25:22,496 copying Mikado/exceptions.py -> build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T12:25:22,497 creating build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T12:25:22,497 copying Mikado/transcripts/transcript.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T12:25:22,498 copying Mikado/transcripts/transcriptchecker.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T12:25:22,499 copying Mikado/transcripts/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T12:25:22,499 copying Mikado/transcripts/clique_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T12:25:22,500 creating build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T12:25:22,500 copying Mikado/parsers/blast_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T12:25:22,501 copying Mikado/parsers/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T12:25:22,502 copying Mikado/parsers/blast_xml.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T12:25:22,502 copying Mikado/parsers/GTF.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T12:25:22,503 copying Mikado/parsers/bed12.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T12:25:22,503 copying Mikado/parsers/gfannotation.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T12:25:22,504 copying Mikado/parsers/GFF.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T12:25:22,505 creating build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T12:25:22,505 copying Mikado/configuration/configurator.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T12:25:22,505 copying Mikado/configuration/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T12:25:22,506 copying Mikado/configuration/daijin_configurator.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T12:25:22,507 creating build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:22,507 copying Mikado/utilities/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:22,508 copying Mikado/utilities/log_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:22,508 copying Mikado/utilities/dbutils.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:22,509 creating build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,509 copying Mikado/tests/test_modifications.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,510 copying Mikado/tests/parser_testing.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,511 copying Mikado/tests/orf_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,511 copying Mikado/tests/locus_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,512 copying Mikado/tests/test_serialisation.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,513 copying Mikado/tests/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,513 copying Mikado/tests/test_invalid_orfs.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,514 copying Mikado/tests/test_clique_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,514 copying Mikado/tests/test_system_calls.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,515 copying Mikado/tests/test_gene.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,515 copying Mikado/tests/test_bed12.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,516 copying Mikado/tests/test_db_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,516 copying Mikado/tests/test_blast_related.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,517 copying Mikado/tests/test_transcript_checker.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,517 copying Mikado/tests/intervaltree_tests.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,518 copying Mikado/tests/test_json.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,518 copying Mikado/tests/transcript_tester_negative.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,519 copying Mikado/tests/assigner_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,520 copying Mikado/tests/transcript_tester_positive.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,520 copying Mikado/tests/transcript_tester_single.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,521 copying Mikado/tests/test_splitting.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,521 copying Mikado/tests/test_external_scores.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,522 copying Mikado/tests/test_metrics.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,522 copying Mikado/tests/test_transcript_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,523 copying Mikado/tests/utilities_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:22,524 creating build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T12:25:22,524 copying Mikado/daijin/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T12:25:22,525 creating build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,525 copying Mikado/loci/locus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,526 copying Mikado/loci/sublocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,526 copying Mikado/loci/excluded.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,527 copying Mikado/loci/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,527 copying Mikado/loci/monosublocusholder.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,528 copying Mikado/loci/superlocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,529 copying Mikado/loci/abstractlocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,529 copying Mikado/loci/reference_gene.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,530 copying Mikado/loci/monosublocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T12:25:22,531 creating build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T12:25:22,531 copying Mikado/picking/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T12:25:22,532 copying Mikado/picking/picker.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T12:25:22,532 copying Mikado/picking/loci_processer.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T12:25:22,533 creating build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T12:25:22,533 copying Mikado/preparation/prepare.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T12:25:22,534 copying Mikado/preparation/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T12:25:22,535 copying Mikado/preparation/annotation_parser.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T12:25:22,535 copying Mikado/preparation/checking.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T12:25:22,536 creating build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T12:25:22,536 copying Mikado/subprograms/__main__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T12:25:22,537 copying Mikado/subprograms/prepare.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T12:25:22,537 copying Mikado/subprograms/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T12:25:22,538 copying Mikado/subprograms/configure.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T12:25:22,538 copying Mikado/subprograms/serialise.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T12:25:22,539 copying Mikado/subprograms/pick.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T12:25:22,539 copying Mikado/subprograms/compare.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T12:25:22,540 creating build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:22,541 copying Mikado/scales/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:22,541 copying Mikado/scales/class_codes.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:22,542 copying Mikado/scales/accountant.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:22,542 copying Mikado/scales/assigner.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:22,543 copying Mikado/scales/resultstorer.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:22,543 copying Mikado/scales/compare.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:22,544 creating build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T12:25:22,545 copying Mikado/serializers/orf.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T12:25:22,545 copying Mikado/serializers/junction.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T12:25:22,546 copying Mikado/serializers/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T12:25:22,546 copying Mikado/serializers/external.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T12:25:22,547 creating build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T12:25:22,547 copying Mikado/transcripts/transcript_methods/retrieval.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T12:25:22,548 copying Mikado/transcripts/transcript_methods/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T12:25:22,548 copying Mikado/transcripts/transcript_methods/splitting.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T12:25:22,549 copying Mikado/transcripts/transcript_methods/printing.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T12:25:22,550 copying Mikado/transcripts/transcript_methods/finalizing.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T12:25:22,551 creating build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,551 copying Mikado/subprograms/util/awk_gtf.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,552 copying Mikado/subprograms/util/metrics.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,552 copying Mikado/subprograms/util/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,553 copying Mikado/subprograms/util/stats.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,553 copying Mikado/subprograms/util/class_codes.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,554 copying Mikado/subprograms/util/trim.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,554 copying Mikado/subprograms/util/convert.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,555 copying Mikado/subprograms/util/merge_blast.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,555 copying Mikado/subprograms/util/grep.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T12:25:22,556 creating build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T12:25:22,556 copying Mikado/serializers/blast_serializer/utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T12:25:22,557 copying Mikado/serializers/blast_serializer/query.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T12:25:22,557 copying Mikado/serializers/blast_serializer/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T12:25:22,558 copying Mikado/serializers/blast_serializer/xml_serialiser.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T12:25:22,558 copying Mikado/serializers/blast_serializer/target.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T12:25:22,559 copying Mikado/serializers/blast_serializer/hit.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T12:25:22,559 copying Mikado/serializers/blast_serializer/hsp.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T12:25:22,560 running egg_info 2025-09-08T12:25:22,633 writing Mikado.egg-info/PKG-INFO 2025-09-08T12:25:22,636 writing dependency_links to Mikado.egg-info/dependency_links.txt 2025-09-08T12:25:22,636 writing entry points to Mikado.egg-info/entry_points.txt 2025-09-08T12:25:22,639 writing requirements to Mikado.egg-info/requires.txt 2025-09-08T12:25:22,640 writing top-level names to Mikado.egg-info/top_level.txt 2025-09-08T12:25:22,723 reading manifest file 'Mikado.egg-info/SOURCES.txt' 2025-09-08T12:25:22,839 reading manifest template 'MANIFEST.in' 2025-09-08T12:25:23,075 adding license file 'AUTHORS' 2025-09-08T12:25:23,188 writing manifest file 'Mikado.egg-info/SOURCES.txt' 2025-09-08T12:25:23,288 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.configuration.scoring_files' is absent from the `packages` configuration. 2025-09-08T12:25:23,288 !! 2025-09-08T12:25:23,288 ******************************************************************************** 2025-09-08T12:25:23,288 ############################ 2025-09-08T12:25:23,288 # Package would be ignored # 2025-09-08T12:25:23,288 ############################ 2025-09-08T12:25:23,289 Python recognizes 'Mikado.configuration.scoring_files' as an importable package[^1], 2025-09-08T12:25:23,289 but it is absent from setuptools' `packages` configuration. 2025-09-08T12:25:23,289 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T12:25:23,289 package, please make sure that 'Mikado.configuration.scoring_files' is explicitly added 2025-09-08T12:25:23,289 to the `packages` configuration field. 2025-09-08T12:25:23,289 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T12:25:23,289 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T12:25:23,289 instead of `find_packages(...)`/`find:`). 2025-09-08T12:25:23,290 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T12:25:23,290 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T12:25:23,290 If you don't want 'Mikado.configuration.scoring_files' to be distributed and are 2025-09-08T12:25:23,290 already explicitly excluding 'Mikado.configuration.scoring_files' via 2025-09-08T12:25:23,290 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T12:25:23,290 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T12:25:23,290 combination with a more fine grained `package-data` configuration. 2025-09-08T12:25:23,290 You can read more about "package data files" on setuptools documentation page: 2025-09-08T12:25:23,291 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T12:25:23,291 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T12:25:23,291 even if it does not contain any `.py` files. 2025-09-08T12:25:23,291 On the other hand, currently there is no concept of package data 2025-09-08T12:25:23,291 directory, all directories are treated like packages. 2025-09-08T12:25:23,291 ******************************************************************************** 2025-09-08T12:25:23,291 !! 2025-09-08T12:25:23,292 check.warn(importable) 2025-09-08T12:25:23,292 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.tests.__pycache__' is absent from the `packages` configuration. 2025-09-08T12:25:23,292 !! 2025-09-08T12:25:23,292 ******************************************************************************** 2025-09-08T12:25:23,292 ############################ 2025-09-08T12:25:23,292 # Package would be ignored # 2025-09-08T12:25:23,292 ############################ 2025-09-08T12:25:23,292 Python recognizes 'Mikado.tests.__pycache__' as an importable package[^1], 2025-09-08T12:25:23,292 but it is absent from setuptools' `packages` configuration. 2025-09-08T12:25:23,292 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T12:25:23,293 package, please make sure that 'Mikado.tests.__pycache__' is explicitly added 2025-09-08T12:25:23,293 to the `packages` configuration field. 2025-09-08T12:25:23,293 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T12:25:23,293 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T12:25:23,293 instead of `find_packages(...)`/`find:`). 2025-09-08T12:25:23,293 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T12:25:23,293 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T12:25:23,294 If you don't want 'Mikado.tests.__pycache__' to be distributed and are 2025-09-08T12:25:23,294 already explicitly excluding 'Mikado.tests.__pycache__' via 2025-09-08T12:25:23,294 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T12:25:23,294 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T12:25:23,294 combination with a more fine grained `package-data` configuration. 2025-09-08T12:25:23,294 You can read more about "package data files" on setuptools documentation page: 2025-09-08T12:25:23,294 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T12:25:23,294 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T12:25:23,295 even if it does not contain any `.py` files. 2025-09-08T12:25:23,295 On the other hand, currently there is no concept of package data 2025-09-08T12:25:23,295 directory, all directories are treated like packages. 2025-09-08T12:25:23,295 ******************************************************************************** 2025-09-08T12:25:23,295 !! 2025-09-08T12:25:23,295 check.warn(importable) 2025-09-08T12:25:23,295 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.tests.fusion_test' is absent from the `packages` configuration. 2025-09-08T12:25:23,295 !! 2025-09-08T12:25:23,295 ******************************************************************************** 2025-09-08T12:25:23,296 ############################ 2025-09-08T12:25:23,296 # Package would be ignored # 2025-09-08T12:25:23,296 ############################ 2025-09-08T12:25:23,296 Python recognizes 'Mikado.tests.fusion_test' as an importable package[^1], 2025-09-08T12:25:23,296 but it is absent from setuptools' `packages` configuration. 2025-09-08T12:25:23,296 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T12:25:23,296 package, please make sure that 'Mikado.tests.fusion_test' is explicitly added 2025-09-08T12:25:23,296 to the `packages` configuration field. 2025-09-08T12:25:23,297 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T12:25:23,297 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T12:25:23,297 instead of `find_packages(...)`/`find:`). 2025-09-08T12:25:23,297 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T12:25:23,297 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T12:25:23,297 If you don't want 'Mikado.tests.fusion_test' to be distributed and are 2025-09-08T12:25:23,297 already explicitly excluding 'Mikado.tests.fusion_test' via 2025-09-08T12:25:23,297 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T12:25:23,298 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T12:25:23,298 combination with a more fine grained `package-data` configuration. 2025-09-08T12:25:23,298 You can read more about "package data files" on setuptools documentation page: 2025-09-08T12:25:23,298 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T12:25:23,298 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T12:25:23,298 even if it does not contain any `.py` files. 2025-09-08T12:25:23,298 On the other hand, currently there is no concept of package data 2025-09-08T12:25:23,298 directory, all directories are treated like packages. 2025-09-08T12:25:23,299 ******************************************************************************** 2025-09-08T12:25:23,299 !! 2025-09-08T12:25:23,299 check.warn(importable) 2025-09-08T12:25:23,304 copying Mikado/configuration/configuration_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T12:25:23,305 copying Mikado/configuration/daijin_schema.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T12:25:23,306 copying Mikado/configuration/requirements_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T12:25:23,306 copying Mikado/configuration/scoring_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T12:25:23,307 creating build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,307 copying Mikado/configuration/scoring_files/athaliana_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,307 copying Mikado/configuration/scoring_files/celegans_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,308 copying Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,308 copying Mikado/configuration/scoring_files/hsapiens_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,309 copying Mikado/configuration/scoring_files/human.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,309 copying Mikado/configuration/scoring_files/insects.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,310 copying Mikado/configuration/scoring_files/plants.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,311 copying Mikado/configuration/scoring_files/scerevisiae.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,311 copying Mikado/configuration/scoring_files/worm.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T12:25:23,312 copying Mikado/utilities/intervaltree.c -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:23,316 copying Mikado/utilities/intervaltree.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:23,316 copying Mikado/utilities/overlap.c -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:23,318 copying Mikado/utilities/overlap.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:23,319 copying Mikado/utilities/overlap.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:23,319 copying Mikado/tests/chr5.fas.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,349 copying Mikado/tests/configuration.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,349 copying Mikado/tests/cufflinks.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,350 copying Mikado/tests/genome.fai -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,351 copying Mikado/tests/junctions.bed -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,351 copying Mikado/tests/mikado.blast.asn.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,353 copying Mikado/tests/mikado.blast.xml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,357 copying Mikado/tests/mikado.db -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,364 copying Mikado/tests/mikado_prepared.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,365 copying Mikado/tests/plants.suspicious_requirement.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,365 copying Mikado/tests/plants.yaml~ -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,366 copying Mikado/tests/scoring_only_cds.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,366 copying Mikado/tests/trinity.cDNA_match.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,367 copying Mikado/tests/trinity.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,368 copying Mikado/tests/trinity.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,368 copying Mikado/tests/trinity.match_matchpart.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,369 copying Mikado/tests/trinity_stats.txt -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,369 copying Mikado/tests/uniprot_sprot_plants.fasta.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T12:25:23,394 creating build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,394 copying Mikado/tests/__pycache__/__init__.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,394 copying Mikado/tests/__pycache__/__init__.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,395 copying Mikado/tests/__pycache__/__init__.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,395 copying Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,396 copying Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,397 copying Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,397 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,398 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,398 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,399 copying Mikado/tests/__pycache__/locus_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,400 copying Mikado/tests/__pycache__/locus_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,401 copying Mikado/tests/__pycache__/locus_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,401 copying Mikado/tests/__pycache__/orf_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,402 copying Mikado/tests/__pycache__/orf_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,403 copying Mikado/tests/__pycache__/orf_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,403 copying Mikado/tests/__pycache__/parser_testing.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,404 copying Mikado/tests/__pycache__/parser_testing.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,404 copying Mikado/tests/__pycache__/parser_testing.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,405 copying Mikado/tests/__pycache__/phases_checker.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,405 copying Mikado/tests/__pycache__/phases_checker.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,406 copying Mikado/tests/__pycache__/system_checks.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,406 copying Mikado/tests/__pycache__/test_bed12.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,407 copying Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,407 copying Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,408 copying Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,408 copying Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,409 copying Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,409 copying Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,410 copying Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,411 copying Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,411 copying Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,412 copying Mikado/tests/__pycache__/test_external_scores.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,412 copying Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,413 copying Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,413 copying Mikado/tests/__pycache__/test_gene.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,414 copying Mikado/tests/__pycache__/test_gene.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,414 copying Mikado/tests/__pycache__/test_gene.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,415 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,415 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,416 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,416 copying Mikado/tests/__pycache__/test_json.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,417 copying Mikado/tests/__pycache__/test_json.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,417 copying Mikado/tests/__pycache__/test_json.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,418 copying Mikado/tests/__pycache__/test_metrics.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,418 copying Mikado/tests/__pycache__/test_metrics.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,419 copying Mikado/tests/__pycache__/test_metrics.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,419 copying Mikado/tests/__pycache__/test_modifications.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,420 copying Mikado/tests/__pycache__/test_modifications.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,420 copying Mikado/tests/__pycache__/test_modifications.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,421 copying Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,421 copying Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,422 copying Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,422 copying Mikado/tests/__pycache__/test_splitting.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,423 copying Mikado/tests/__pycache__/test_splitting.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,423 copying Mikado/tests/__pycache__/test_splitting.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,424 copying Mikado/tests/__pycache__/test_system_calls.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,425 copying Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,425 copying Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,426 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,426 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,427 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,428 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,428 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,429 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,429 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,430 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,431 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,431 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,432 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,433 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,433 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,434 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,435 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,435 copying Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,436 copying Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,436 copying Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T12:25:23,437 creating build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T12:25:23,437 copying Mikado/tests/fusion_test/fusion_test.log -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T12:25:23,438 copying Mikado/tests/fusion_test/fusion_test_pred.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T12:25:23,438 copying Mikado/tests/fusion_test/fusion_test_ref.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T12:25:23,439 copying Mikado/daijin/example_config.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T12:25:23,439 copying Mikado/daijin/hpc.json -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T12:25:23,440 copying Mikado/daijin/hpc.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T12:25:23,440 copying Mikado/daijin/mikado.snakefile -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T12:25:23,441 copying Mikado/daijin/tr.snakefile -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T12:25:23,441 copying Mikado/scales/contrast.c -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:23,444 copying Mikado/scales/contrast.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:23,445 copying Mikado/scales/contrast.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:23,445 copying Mikado/scales/f1.c -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:23,447 copying Mikado/scales/f1.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:23,448 copying Mikado/scales/f1.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:23,453 running build_ext 2025-09-08T12:25:23,460 building 'Mikado.utilities.overlap' extension 2025-09-08T12:25:23,460 creating build/temp.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T12:25:23,461 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/utilities/overlap.c -o build/temp.linux-armv7l-cpython-313/Mikado/utilities/overlap.o 2025-09-08T12:25:27,475 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/utilities/overlap.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so 2025-09-08T12:25:27,592 building 'Mikado.scales.f1' extension 2025-09-08T12:25:27,592 creating build/temp.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T12:25:27,593 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/scales/f1.c -o build/temp.linux-armv7l-cpython-313/Mikado/scales/f1.o 2025-09-08T12:25:30,891 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/scales/f1.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so 2025-09-08T12:25:31,004 building 'Mikado.scales.contrast' extension 2025-09-08T12:25:31,005 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/scales/contrast.c -o build/temp.linux-armv7l-cpython-313/Mikado/scales/contrast.o 2025-09-08T12:25:43,511 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/scales/contrast.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so 2025-09-08T12:25:43,634 building 'Mikado.utilities.intervaltree' extension 2025-09-08T12:25:43,634 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/utilities/intervaltree.c -o build/temp.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.o 2025-09-08T12:26:03,392 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so 2025-09-08T12:26:03,529 running build_scripts 2025-09-08T12:26:03,530 creating build/scripts-3.13 2025-09-08T12:26:03,530 copying and adjusting util/trim_long_introns.py -> build/scripts-3.13 2025-09-08T12:26:03,531 copying and adjusting util/asm_collect.py -> build/scripts-3.13 2025-09-08T12:26:03,531 copying and adjusting util/bam2gtf.py -> build/scripts-3.13 2025-09-08T12:26:03,532 copying and adjusting util/self_training.py -> build/scripts-3.13 2025-09-08T12:26:03,533 copying and adjusting util/convert_cdna_match_gff3.py -> build/scripts-3.13 2025-09-08T12:26:03,533 copying and adjusting util/calculate_distances.py -> build/scripts-3.13 2025-09-08T12:26:03,534 copying util/tease_maker_apart.py -> build/scripts-3.13 2025-09-08T12:26:03,535 copying and adjusting util/merge_junction_bed12.py -> build/scripts-3.13 2025-09-08T12:26:03,535 copying and adjusting util/getFastaFromIds.py -> build/scripts-3.13 2025-09-08T12:26:03,536 copying and adjusting util/gffjunc_to_bed12.py -> build/scripts-3.13 2025-09-08T12:26:03,536 copying and adjusting util/sanitize_blast_db.py -> build/scripts-3.13 2025-09-08T12:26:03,537 copying and adjusting util/remove_utrs.py -> build/scripts-3.13 2025-09-08T12:26:03,537 copying and adjusting util/align_collect.py -> build/scripts-3.13 2025-09-08T12:26:03,538 copying and adjusting util/extract_promoter_regions.py -> build/scripts-3.13 2025-09-08T12:26:03,538 copying and adjusting util/grep.py -> build/scripts-3.13 2025-09-08T12:26:03,539 copying and adjusting util/add_transcript_feature_to_gtf.py -> build/scripts-3.13 2025-09-08T12:26:03,539 copying and adjusting util/class_run.py -> build/scripts-3.13 2025-09-08T12:26:03,540 copying and adjusting util/split_fasta.py -> build/scripts-3.13 2025-09-08T12:26:03,540 copying and adjusting util/remove_from_embl.py -> build/scripts-3.13 2025-09-08T12:26:03,541 copying and adjusting util/analyse_metrics.py -> build/scripts-3.13 2025-09-08T12:26:03,541 copying and adjusting util/create_model.py -> build/scripts-3.13 2025-09-08T12:26:03,542 changing mode of build/scripts-3.13/trim_long_introns.py from 644 to 755 2025-09-08T12:26:03,542 changing mode of build/scripts-3.13/asm_collect.py from 644 to 755 2025-09-08T12:26:03,542 changing mode of build/scripts-3.13/bam2gtf.py from 644 to 755 2025-09-08T12:26:03,542 changing mode of build/scripts-3.13/self_training.py from 644 to 755 2025-09-08T12:26:03,542 changing mode of build/scripts-3.13/convert_cdna_match_gff3.py from 644 to 755 2025-09-08T12:26:03,542 changing mode of build/scripts-3.13/calculate_distances.py from 644 to 755 2025-09-08T12:26:03,542 changing mode of build/scripts-3.13/tease_maker_apart.py from 644 to 755 2025-09-08T12:26:03,542 changing mode of build/scripts-3.13/merge_junction_bed12.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/getFastaFromIds.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/gffjunc_to_bed12.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/sanitize_blast_db.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/remove_utrs.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/align_collect.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/extract_promoter_regions.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/grep.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/add_transcript_feature_to_gtf.py from 644 to 755 2025-09-08T12:26:03,543 changing mode of build/scripts-3.13/class_run.py from 644 to 755 2025-09-08T12:26:03,544 changing mode of build/scripts-3.13/split_fasta.py from 644 to 755 2025-09-08T12:26:03,544 changing mode of build/scripts-3.13/remove_from_embl.py from 644 to 755 2025-09-08T12:26:03,544 changing mode of build/scripts-3.13/analyse_metrics.py from 644 to 755 2025-09-08T12:26:03,544 changing mode of build/scripts-3.13/create_model.py from 644 to 755 2025-09-08T12:26:03,674 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-08T12:26:03,674 !! 2025-09-08T12:26:03,674 ******************************************************************************** 2025-09-08T12:26:03,674 Please avoid running ``setup.py`` directly. 2025-09-08T12:26:03,674 Instead, use pypa/build, pypa/installer or other 2025-09-08T12:26:03,674 standards-based tools. 2025-09-08T12:26:03,675 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T12:26:03,675 or your builds will no longer be supported. 2025-09-08T12:26:03,675 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-08T12:26:03,675 ******************************************************************************** 2025-09-08T12:26:03,675 !! 2025-09-08T12:26:03,675 self.initialize_options() 2025-09-08T12:26:03,748 installing to build/bdist.linux-armv7l/wheel 2025-09-08T12:26:03,748 running install 2025-09-08T12:26:03,771 running install_lib 2025-09-08T12:26:03,842 creating build/bdist.linux-armv7l/wheel 2025-09-08T12:26:03,842 creating build/bdist.linux-armv7l/wheel/Mikado 2025-09-08T12:26:03,843 creating build/bdist.linux-armv7l/wheel/Mikado/serializers 2025-09-08T12:26:03,843 creating build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2025-09-08T12:26:03,843 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/hsp.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T12:26:03,844 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/hit.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T12:26:03,844 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/target.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T12:26:03,845 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/xml_serialiser.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T12:26:03,845 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T12:26:03,846 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/query.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T12:26:03,846 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T12:26:03,846 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/external.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T12:26:03,847 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T12:26:03,847 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/junction.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T12:26:03,847 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/orf.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T12:26:03,848 creating build/bdist.linux-armv7l/wheel/Mikado/scales 2025-09-08T12:26:03,848 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,851 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,852 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,853 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,853 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.c -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,855 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,855 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,855 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.c -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,858 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/compare.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,858 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/resultstorer.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,859 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/assigner.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,859 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/accountant.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,860 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/class_codes.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,860 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T12:26:03,861 creating build/bdist.linux-armv7l/wheel/Mikado/subprograms 2025-09-08T12:26:03,861 creating build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2025-09-08T12:26:03,862 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/grep.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,862 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/merge_blast.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,862 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/convert.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,863 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/trim.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,863 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/class_codes.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,864 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/stats.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,864 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,864 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/metrics.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,865 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/awk_gtf.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T12:26:03,865 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/compare.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T12:26:03,865 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/pick.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T12:26:03,866 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/serialise.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T12:26:03,866 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/configure.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T12:26:03,867 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T12:26:03,867 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/prepare.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T12:26:03,867 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/__main__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T12:26:03,868 creating build/bdist.linux-armv7l/wheel/Mikado/preparation 2025-09-08T12:26:03,868 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/checking.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T12:26:03,869 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/annotation_parser.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T12:26:03,869 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T12:26:03,869 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/prepare.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T12:26:03,870 creating build/bdist.linux-armv7l/wheel/Mikado/picking 2025-09-08T12:26:03,870 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/loci_processer.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T12:26:03,871 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/picker.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T12:26:03,871 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T12:26:03,872 creating build/bdist.linux-armv7l/wheel/Mikado/loci 2025-09-08T12:26:03,872 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/monosublocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,873 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/reference_gene.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,873 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/abstractlocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,874 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/superlocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,874 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/monosublocusholder.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,875 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,875 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/excluded.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,875 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/sublocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,876 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/locus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T12:26:03,877 creating build/bdist.linux-armv7l/wheel/Mikado/daijin 2025-09-08T12:26:03,877 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/tr.snakefile -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T12:26:03,877 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/mikado.snakefile -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T12:26:03,878 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/hpc.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T12:26:03,878 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/hpc.json -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T12:26:03,878 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/example_config.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T12:26:03,879 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T12:26:03,879 creating build/bdist.linux-armv7l/wheel/Mikado/tests 2025-09-08T12:26:03,880 creating build/bdist.linux-armv7l/wheel/Mikado/tests/fusion_test 2025-09-08T12:26:03,880 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test_ref.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T12:26:03,881 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test_pred.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T12:26:03,881 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test.log -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T12:26:03,882 creating build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2025-09-08T12:26:03,882 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,882 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,883 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,883 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,884 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,884 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,885 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,885 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,886 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,886 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,887 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,887 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,888 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,888 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,888 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,889 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,889 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,890 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,890 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,891 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,891 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_system_calls.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,892 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_splitting.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,892 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_splitting.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,892 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_splitting.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,893 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,893 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,893 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,894 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_modifications.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,894 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_modifications.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,895 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_modifications.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,895 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_metrics.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,895 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_metrics.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,896 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_metrics.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,896 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_json.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,896 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_json.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,897 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_json.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,897 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,897 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,898 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,898 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_gene.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,898 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_gene.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,899 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_gene.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,899 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,900 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,900 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_external_scores.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,900 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,901 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,901 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,901 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,902 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,902 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,903 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,903 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,903 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,904 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_bed12.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,904 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/system_checks.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,904 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/phases_checker.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,905 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/phases_checker.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,905 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/parser_testing.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,905 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/parser_testing.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,906 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/parser_testing.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,906 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/orf_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,907 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/orf_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,907 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/orf_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,907 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/locus_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,908 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/locus_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,909 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/locus_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,909 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,910 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,910 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,911 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,911 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,912 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,912 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,913 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/__init__.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,913 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/__init__.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T12:26:03,913 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/uniprot_sprot_plants.fasta.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,937 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity_stats.txt -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,938 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.match_matchpart.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,938 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,939 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,939 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.cDNA_match.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,940 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/scoring_only_cds.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,940 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/plants.yaml~ -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,940 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/plants.suspicious_requirement.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,941 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado_prepared.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,941 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.db -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,948 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.blast.xml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,952 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.blast.asn.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,953 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/junctions.bed -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,954 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/genome.fai -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,954 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/cufflinks.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,955 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/configuration.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,955 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/chr5.fas.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,984 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/utilities_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,985 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_transcript_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,985 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_metrics.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,985 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_external_scores.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,986 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_splitting.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,986 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_single.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,987 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_positive.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,987 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/assigner_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,988 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_negative.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,988 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_json.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,989 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/intervaltree_tests.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,989 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_transcript_checker.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,989 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_blast_related.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,990 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_db_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,990 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_bed12.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,991 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_gene.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,991 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_system_calls.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,992 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_clique_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,992 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_invalid_orfs.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,992 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,993 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_serialisation.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,993 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/locus_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,994 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/orf_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,994 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/parser_testing.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,995 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_modifications.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T12:26:03,995 creating build/bdist.linux-armv7l/wheel/Mikado/utilities 2025-09-08T12:26:03,995 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,000 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,001 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,001 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,002 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.c -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,003 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,004 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.c -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,008 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/dbutils.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,008 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/log_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,009 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T12:26:04,009 creating build/bdist.linux-armv7l/wheel/Mikado/configuration 2025-09-08T12:26:04,010 creating build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2025-09-08T12:26:04,010 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/worm.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,010 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/scerevisiae.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,011 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/plants.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,011 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/insects.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,011 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/human.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,012 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/hsapiens_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,012 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,012 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/celegans_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,013 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/athaliana_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T12:26:04,013 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T12:26:04,014 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/requirements_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T12:26:04,014 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/daijin_schema.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T12:26:04,014 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/configuration_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T12:26:04,015 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/daijin_configurator.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T12:26:04,015 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T12:26:04,016 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/configurator.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T12:26:04,016 creating build/bdist.linux-armv7l/wheel/Mikado/parsers 2025-09-08T12:26:04,016 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/GFF.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T12:26:04,017 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/gfannotation.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T12:26:04,017 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/bed12.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T12:26:04,018 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/GTF.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T12:26:04,018 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/blast_xml.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T12:26:04,019 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T12:26:04,019 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/blast_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T12:26:04,020 creating build/bdist.linux-armv7l/wheel/Mikado/transcripts 2025-09-08T12:26:04,020 creating build/bdist.linux-armv7l/wheel/Mikado/transcripts/transcript_methods 2025-09-08T12:26:04,020 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/finalizing.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T12:26:04,021 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/printing.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T12:26:04,021 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/splitting.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T12:26:04,022 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T12:26:04,022 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/retrieval.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T12:26:04,023 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/clique_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T12:26:04,023 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T12:26:04,023 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcriptchecker.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T12:26:04,024 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T12:26:04,024 copying build/lib.linux-armv7l-cpython-313/Mikado/exceptions.py -> build/bdist.linux-armv7l/wheel/./Mikado 2025-09-08T12:26:04,025 copying build/lib.linux-armv7l-cpython-313/Mikado/version.py -> build/bdist.linux-armv7l/wheel/./Mikado 2025-09-08T12:26:04,025 copying build/lib.linux-armv7l-cpython-313/Mikado/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado 2025-09-08T12:26:04,026 running install_egg_info 2025-09-08T12:26:04,101 Copying Mikado.egg-info to build/bdist.linux-armv7l/wheel/./Mikado-1.2.2-py3.13.egg-info 2025-09-08T12:26:04,104 running install_scripts 2025-09-08T12:26:04,104 creating build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,105 copying build/scripts-3.13/create_model.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,105 copying build/scripts-3.13/analyse_metrics.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,106 copying build/scripts-3.13/remove_from_embl.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,106 copying build/scripts-3.13/split_fasta.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,106 copying build/scripts-3.13/class_run.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,107 copying build/scripts-3.13/add_transcript_feature_to_gtf.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,107 copying build/scripts-3.13/grep.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,107 copying build/scripts-3.13/extract_promoter_regions.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,108 copying build/scripts-3.13/align_collect.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,108 copying build/scripts-3.13/remove_utrs.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,108 copying build/scripts-3.13/sanitize_blast_db.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,109 copying build/scripts-3.13/gffjunc_to_bed12.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,109 copying build/scripts-3.13/getFastaFromIds.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,109 copying build/scripts-3.13/merge_junction_bed12.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,110 copying build/scripts-3.13/tease_maker_apart.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,110 copying build/scripts-3.13/calculate_distances.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,111 copying build/scripts-3.13/convert_cdna_match_gff3.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,111 copying build/scripts-3.13/self_training.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,111 copying build/scripts-3.13/bam2gtf.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,112 copying build/scripts-3.13/asm_collect.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,112 copying build/scripts-3.13/trim_long_introns.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts 2025-09-08T12:26:04,112 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/create_model.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/analyse_metrics.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/remove_from_embl.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/split_fasta.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/class_run.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/add_transcript_feature_to_gtf.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/grep.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/extract_promoter_regions.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/align_collect.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/remove_utrs.py to 755 2025-09-08T12:26:04,113 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/sanitize_blast_db.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/gffjunc_to_bed12.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/getFastaFromIds.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/merge_junction_bed12.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/tease_maker_apart.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/calculate_distances.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/convert_cdna_match_gff3.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/self_training.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/bam2gtf.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/asm_collect.py to 755 2025-09-08T12:26:04,114 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.2.data/scripts/trim_long_introns.py to 755 2025-09-08T12:26:04,165 creating build/bdist.linux-armv7l/wheel/mikado-1.2.2.dist-info/WHEEL 2025-09-08T12:26:04,166 creating '/tmp/pip-wheel-yofgn9ax/mikado-1.2.2-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-08T12:26:04,168 adding 'Mikado/__init__.py' 2025-09-08T12:26:04,169 adding 'Mikado/exceptions.py' 2025-09-08T12:26:04,169 adding 'Mikado/version.py' 2025-09-08T12:26:04,170 adding 'Mikado/configuration/__init__.py' 2025-09-08T12:26:04,173 adding 'Mikado/configuration/configuration_blueprint.json' 2025-09-08T12:26:04,176 adding 'Mikado/configuration/configurator.py' 2025-09-08T12:26:04,177 adding 'Mikado/configuration/daijin_configurator.py' 2025-09-08T12:26:04,179 adding 'Mikado/configuration/daijin_schema.json' 2025-09-08T12:26:04,179 adding 'Mikado/configuration/requirements_blueprint.json' 2025-09-08T12:26:04,180 adding 'Mikado/configuration/scoring_blueprint.json' 2025-09-08T12:26:04,181 adding 'Mikado/configuration/scoring_files/athaliana_scoring.yaml' 2025-09-08T12:26:04,181 adding 'Mikado/configuration/scoring_files/celegans_scoring.yaml' 2025-09-08T12:26:04,182 adding 'Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml' 2025-09-08T12:26:04,183 adding 'Mikado/configuration/scoring_files/hsapiens_scoring.yaml' 2025-09-08T12:26:04,184 adding 'Mikado/configuration/scoring_files/human.yaml' 2025-09-08T12:26:04,184 adding 'Mikado/configuration/scoring_files/insects.yaml' 2025-09-08T12:26:04,185 adding 'Mikado/configuration/scoring_files/plants.yaml' 2025-09-08T12:26:04,186 adding 'Mikado/configuration/scoring_files/scerevisiae.yaml' 2025-09-08T12:26:04,186 adding 'Mikado/configuration/scoring_files/worm.yaml' 2025-09-08T12:26:04,189 adding 'Mikado/daijin/__init__.py' 2025-09-08T12:26:04,190 adding 'Mikado/daijin/example_config.yaml' 2025-09-08T12:26:04,190 adding 'Mikado/daijin/hpc.json' 2025-09-08T12:26:04,191 adding 'Mikado/daijin/hpc.yaml' 2025-09-08T12:26:04,192 adding 'Mikado/daijin/mikado.snakefile' 2025-09-08T12:26:04,195 adding 'Mikado/daijin/tr.snakefile' 2025-09-08T12:26:04,196 adding 'Mikado/loci/__init__.py' 2025-09-08T12:26:04,203 adding 'Mikado/loci/abstractlocus.py' 2025-09-08T12:26:04,204 adding 'Mikado/loci/excluded.py' 2025-09-08T12:26:04,207 adding 'Mikado/loci/locus.py' 2025-09-08T12:26:04,208 adding 'Mikado/loci/monosublocus.py' 2025-09-08T12:26:04,210 adding 'Mikado/loci/monosublocusholder.py' 2025-09-08T12:26:04,212 adding 'Mikado/loci/reference_gene.py' 2025-09-08T12:26:04,214 adding 'Mikado/loci/sublocus.py' 2025-09-08T12:26:04,219 adding 'Mikado/loci/superlocus.py' 2025-09-08T12:26:04,221 adding 'Mikado/parsers/GFF.py' 2025-09-08T12:26:04,222 adding 'Mikado/parsers/GTF.py' 2025-09-08T12:26:04,223 adding 'Mikado/parsers/__init__.py' 2025-09-08T12:26:04,226 adding 'Mikado/parsers/bed12.py' 2025-09-08T12:26:04,228 adding 'Mikado/parsers/blast_utils.py' 2025-09-08T12:26:04,232 adding 'Mikado/parsers/blast_xml.py' 2025-09-08T12:26:04,233 adding 'Mikado/parsers/gfannotation.py' 2025-09-08T12:26:04,234 adding 'Mikado/picking/__init__.py' 2025-09-08T12:26:04,237 adding 'Mikado/picking/loci_processer.py' 2025-09-08T12:26:04,242 adding 'Mikado/picking/picker.py' 2025-09-08T12:26:04,243 adding 'Mikado/preparation/__init__.py' 2025-09-08T12:26:04,245 adding 'Mikado/preparation/annotation_parser.py' 2025-09-08T12:26:04,246 adding 'Mikado/preparation/checking.py' 2025-09-08T12:26:04,248 adding 'Mikado/preparation/prepare.py' 2025-09-08T12:26:04,249 adding 'Mikado/scales/__init__.py' 2025-09-08T12:26:04,252 adding 'Mikado/scales/accountant.py' 2025-09-08T12:26:04,256 adding 'Mikado/scales/assigner.py' 2025-09-08T12:26:04,257 adding 'Mikado/scales/class_codes.py' 2025-09-08T12:26:04,260 adding 'Mikado/scales/compare.py' 2025-09-08T12:26:04,309 adding 'Mikado/scales/contrast.c' 2025-09-08T12:26:04,432 adding 'Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T12:26:04,436 adding 'Mikado/scales/contrast.pxd' 2025-09-08T12:26:04,438 adding 'Mikado/scales/contrast.pyx' 2025-09-08T12:26:04,470 adding 'Mikado/scales/f1.c' 2025-09-08T12:26:04,509 adding 'Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T12:26:04,512 adding 'Mikado/scales/f1.pxd' 2025-09-08T12:26:04,512 adding 'Mikado/scales/f1.pyx' 2025-09-08T12:26:04,513 adding 'Mikado/scales/resultstorer.py' 2025-09-08T12:26:04,514 adding 'Mikado/serializers/__init__.py' 2025-09-08T12:26:04,515 adding 'Mikado/serializers/external.py' 2025-09-08T12:26:04,516 adding 'Mikado/serializers/junction.py' 2025-09-08T12:26:04,517 adding 'Mikado/serializers/orf.py' 2025-09-08T12:26:04,518 adding 'Mikado/serializers/blast_serializer/__init__.py' 2025-09-08T12:26:04,519 adding 'Mikado/serializers/blast_serializer/hit.py' 2025-09-08T12:26:04,520 adding 'Mikado/serializers/blast_serializer/hsp.py' 2025-09-08T12:26:04,521 adding 'Mikado/serializers/blast_serializer/query.py' 2025-09-08T12:26:04,522 adding 'Mikado/serializers/blast_serializer/target.py' 2025-09-08T12:26:04,523 adding 'Mikado/serializers/blast_serializer/utils.py' 2025-09-08T12:26:04,526 adding 'Mikado/serializers/blast_serializer/xml_serialiser.py' 2025-09-08T12:26:04,527 adding 'Mikado/subprograms/__init__.py' 2025-09-08T12:26:04,528 adding 'Mikado/subprograms/__main__.py' 2025-09-08T12:26:04,528 adding 'Mikado/subprograms/compare.py' 2025-09-08T12:26:04,530 adding 'Mikado/subprograms/configure.py' 2025-09-08T12:26:04,532 adding 'Mikado/subprograms/pick.py' 2025-09-08T12:26:04,533 adding 'Mikado/subprograms/prepare.py' 2025-09-08T12:26:04,535 adding 'Mikado/subprograms/serialise.py' 2025-09-08T12:26:04,536 adding 'Mikado/subprograms/util/__init__.py' 2025-09-08T12:26:04,537 adding 'Mikado/subprograms/util/awk_gtf.py' 2025-09-08T12:26:04,537 adding 'Mikado/subprograms/util/class_codes.py' 2025-09-08T12:26:04,538 adding 'Mikado/subprograms/util/convert.py' 2025-09-08T12:26:04,539 adding 'Mikado/subprograms/util/grep.py' 2025-09-08T12:26:04,540 adding 'Mikado/subprograms/util/merge_blast.py' 2025-09-08T12:26:04,541 adding 'Mikado/subprograms/util/metrics.py' 2025-09-08T12:26:04,543 adding 'Mikado/subprograms/util/stats.py' 2025-09-08T12:26:04,545 adding 'Mikado/subprograms/util/trim.py' 2025-09-08T12:26:04,546 adding 'Mikado/tests/__init__.py' 2025-09-08T12:26:04,548 adding 'Mikado/tests/assigner_tester.py' 2025-09-08T12:26:05,413 adding 'Mikado/tests/chr5.fas.gz' 2025-09-08T12:26:05,464 adding 'Mikado/tests/configuration.yaml' 2025-09-08T12:26:05,466 adding 'Mikado/tests/cufflinks.gtf' 2025-09-08T12:26:05,466 adding 'Mikado/tests/genome.fai' 2025-09-08T12:26:05,467 adding 'Mikado/tests/intervaltree_tests.py' 2025-09-08T12:26:05,472 adding 'Mikado/tests/junctions.bed' 2025-09-08T12:26:05,478 adding 'Mikado/tests/locus_tester.py' 2025-09-08T12:26:05,502 adding 'Mikado/tests/mikado.blast.asn.gz' 2025-09-08T12:26:05,556 adding 'Mikado/tests/mikado.blast.xml' 2025-09-08T12:26:05,827 adding 'Mikado/tests/mikado.db' 2025-09-08T12:26:05,842 adding 'Mikado/tests/mikado_prepared.gtf' 2025-09-08T12:26:05,847 adding 'Mikado/tests/orf_tester.py' 2025-09-08T12:26:05,848 adding 'Mikado/tests/parser_testing.py' 2025-09-08T12:26:05,849 adding 'Mikado/tests/plants.suspicious_requirement.yaml' 2025-09-08T12:26:05,849 adding 'Mikado/tests/plants.yaml~' 2025-09-08T12:26:05,850 adding 'Mikado/tests/scoring_only_cds.yaml' 2025-09-08T12:26:05,851 adding 'Mikado/tests/test_bed12.py' 2025-09-08T12:26:05,852 adding 'Mikado/tests/test_blast_related.py' 2025-09-08T12:26:05,853 adding 'Mikado/tests/test_clique_methods.py' 2025-09-08T12:26:05,854 adding 'Mikado/tests/test_db_utils.py' 2025-09-08T12:26:05,854 adding 'Mikado/tests/test_external_scores.py' 2025-09-08T12:26:05,855 adding 'Mikado/tests/test_gene.py' 2025-09-08T12:26:05,856 adding 'Mikado/tests/test_invalid_orfs.py' 2025-09-08T12:26:05,856 adding 'Mikado/tests/test_json.py' 2025-09-08T12:26:05,857 adding 'Mikado/tests/test_metrics.py' 2025-09-08T12:26:05,858 adding 'Mikado/tests/test_modifications.py' 2025-09-08T12:26:05,859 adding 'Mikado/tests/test_serialisation.py' 2025-09-08T12:26:05,860 adding 'Mikado/tests/test_splitting.py' 2025-09-08T12:26:05,863 adding 'Mikado/tests/test_system_calls.py' 2025-09-08T12:26:05,864 adding 'Mikado/tests/test_transcript_checker.py' 2025-09-08T12:26:05,866 adding 'Mikado/tests/test_transcript_methods.py' 2025-09-08T12:26:05,868 adding 'Mikado/tests/transcript_tester_negative.py' 2025-09-08T12:26:05,871 adding 'Mikado/tests/transcript_tester_positive.py' 2025-09-08T12:26:05,874 adding 'Mikado/tests/transcript_tester_single.py' 2025-09-08T12:26:05,875 adding 'Mikado/tests/trinity.cDNA_match.gff3' 2025-09-08T12:26:05,877 adding 'Mikado/tests/trinity.gff3' 2025-09-08T12:26:05,879 adding 'Mikado/tests/trinity.gtf' 2025-09-08T12:26:05,880 adding 'Mikado/tests/trinity.match_matchpart.gff3' 2025-09-08T12:26:05,881 adding 'Mikado/tests/trinity_stats.txt' 2025-09-08T12:26:06,590 adding 'Mikado/tests/uniprot_sprot_plants.fasta.gz' 2025-09-08T12:26:06,632 adding 'Mikado/tests/utilities_tester.py' 2025-09-08T12:26:06,633 adding 'Mikado/tests/__pycache__/__init__.cpython-34.pyc' 2025-09-08T12:26:06,634 adding 'Mikado/tests/__pycache__/__init__.cpython-35.pyc' 2025-09-08T12:26:06,634 adding 'Mikado/tests/__pycache__/__init__.cpython-36.pyc' 2025-09-08T12:26:06,638 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc' 2025-09-08T12:26:06,642 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc' 2025-09-08T12:26:06,646 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc' 2025-09-08T12:26:06,647 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc' 2025-09-08T12:26:06,649 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc' 2025-09-08T12:26:06,650 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc' 2025-09-08T12:26:06,658 adding 'Mikado/tests/__pycache__/locus_tester.cpython-34.pyc' 2025-09-08T12:26:06,666 adding 'Mikado/tests/__pycache__/locus_tester.cpython-35.pyc' 2025-09-08T12:26:06,673 adding 'Mikado/tests/__pycache__/locus_tester.cpython-36.pyc' 2025-09-08T12:26:06,679 adding 'Mikado/tests/__pycache__/orf_tester.cpython-34.pyc' 2025-09-08T12:26:06,684 adding 'Mikado/tests/__pycache__/orf_tester.cpython-35.pyc' 2025-09-08T12:26:06,690 adding 'Mikado/tests/__pycache__/orf_tester.cpython-36.pyc' 2025-09-08T12:26:06,691 adding 'Mikado/tests/__pycache__/parser_testing.cpython-34.pyc' 2025-09-08T12:26:06,692 adding 'Mikado/tests/__pycache__/parser_testing.cpython-35.pyc' 2025-09-08T12:26:06,692 adding 'Mikado/tests/__pycache__/parser_testing.cpython-36.pyc' 2025-09-08T12:26:06,693 adding 'Mikado/tests/__pycache__/phases_checker.cpython-34.pyc' 2025-09-08T12:26:06,694 adding 'Mikado/tests/__pycache__/phases_checker.cpython-35.pyc' 2025-09-08T12:26:06,696 adding 'Mikado/tests/__pycache__/system_checks.cpython-35.pyc' 2025-09-08T12:26:06,698 adding 'Mikado/tests/__pycache__/test_bed12.cpython-36.pyc' 2025-09-08T12:26:06,699 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc' 2025-09-08T12:26:06,700 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc' 2025-09-08T12:26:06,701 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc' 2025-09-08T12:26:06,702 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc' 2025-09-08T12:26:06,702 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc' 2025-09-08T12:26:06,703 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc' 2025-09-08T12:26:06,704 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc' 2025-09-08T12:26:06,705 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc' 2025-09-08T12:26:06,706 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc' 2025-09-08T12:26:06,707 adding 'Mikado/tests/__pycache__/test_external_scores.cpython-34.pyc' 2025-09-08T12:26:06,708 adding 'Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc' 2025-09-08T12:26:06,709 adding 'Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc' 2025-09-08T12:26:06,709 adding 'Mikado/tests/__pycache__/test_gene.cpython-34.pyc' 2025-09-08T12:26:06,710 adding 'Mikado/tests/__pycache__/test_gene.cpython-35.pyc' 2025-09-08T12:26:06,711 adding 'Mikado/tests/__pycache__/test_gene.cpython-36.pyc' 2025-09-08T12:26:06,712 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc' 2025-09-08T12:26:06,713 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc' 2025-09-08T12:26:06,714 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc' 2025-09-08T12:26:06,715 adding 'Mikado/tests/__pycache__/test_json.cpython-34.pyc' 2025-09-08T12:26:06,716 adding 'Mikado/tests/__pycache__/test_json.cpython-35.pyc' 2025-09-08T12:26:06,717 adding 'Mikado/tests/__pycache__/test_json.cpython-36.pyc' 2025-09-08T12:26:06,718 adding 'Mikado/tests/__pycache__/test_metrics.cpython-34.pyc' 2025-09-08T12:26:06,719 adding 'Mikado/tests/__pycache__/test_metrics.cpython-35.pyc' 2025-09-08T12:26:06,721 adding 'Mikado/tests/__pycache__/test_metrics.cpython-36.pyc' 2025-09-08T12:26:06,722 adding 'Mikado/tests/__pycache__/test_modifications.cpython-34.pyc' 2025-09-08T12:26:06,722 adding 'Mikado/tests/__pycache__/test_modifications.cpython-35.pyc' 2025-09-08T12:26:06,723 adding 'Mikado/tests/__pycache__/test_modifications.cpython-36.pyc' 2025-09-08T12:26:06,725 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc' 2025-09-08T12:26:06,726 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc' 2025-09-08T12:26:06,727 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc' 2025-09-08T12:26:06,728 adding 'Mikado/tests/__pycache__/test_splitting.cpython-34.pyc' 2025-09-08T12:26:06,730 adding 'Mikado/tests/__pycache__/test_splitting.cpython-35.pyc' 2025-09-08T12:26:06,732 adding 'Mikado/tests/__pycache__/test_splitting.cpython-36.pyc' 2025-09-08T12:26:06,735 adding 'Mikado/tests/__pycache__/test_system_calls.cpython-34.pyc' 2025-09-08T12:26:06,739 adding 'Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc' 2025-09-08T12:26:06,743 adding 'Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc' 2025-09-08T12:26:06,744 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc' 2025-09-08T12:26:06,746 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc' 2025-09-08T12:26:06,747 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc' 2025-09-08T12:26:06,749 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc' 2025-09-08T12:26:06,751 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc' 2025-09-08T12:26:06,753 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc' 2025-09-08T12:26:06,756 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc' 2025-09-08T12:26:06,758 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc' 2025-09-08T12:26:06,762 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc' 2025-09-08T12:26:06,767 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc' 2025-09-08T12:26:06,772 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc' 2025-09-08T12:26:06,776 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc' 2025-09-08T12:26:06,780 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc' 2025-09-08T12:26:06,783 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc' 2025-09-08T12:26:06,786 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc' 2025-09-08T12:26:06,787 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc' 2025-09-08T12:26:06,789 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc' 2025-09-08T12:26:06,790 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc' 2025-09-08T12:26:06,791 adding 'Mikado/tests/fusion_test/fusion_test.log' 2025-09-08T12:26:06,792 adding 'Mikado/tests/fusion_test/fusion_test_pred.gtf' 2025-09-08T12:26:06,792 adding 'Mikado/tests/fusion_test/fusion_test_ref.gff3' 2025-09-08T12:26:06,793 adding 'Mikado/transcripts/__init__.py' 2025-09-08T12:26:06,794 adding 'Mikado/transcripts/clique_methods.py' 2025-09-08T12:26:06,805 adding 'Mikado/transcripts/transcript.py' 2025-09-08T12:26:06,808 adding 'Mikado/transcripts/transcriptchecker.py' 2025-09-08T12:26:06,809 adding 'Mikado/transcripts/transcript_methods/__init__.py' 2025-09-08T12:26:06,812 adding 'Mikado/transcripts/transcript_methods/finalizing.py' 2025-09-08T12:26:06,813 adding 'Mikado/transcripts/transcript_methods/printing.py' 2025-09-08T12:26:06,816 adding 'Mikado/transcripts/transcript_methods/retrieval.py' 2025-09-08T12:26:06,820 adding 'Mikado/transcripts/transcript_methods/splitting.py' 2025-09-08T12:26:06,821 adding 'Mikado/utilities/__init__.py' 2025-09-08T12:26:06,822 adding 'Mikado/utilities/dbutils.py' 2025-09-08T12:26:06,892 adding 'Mikado/utilities/intervaltree.c' 2025-09-08T12:26:07,109 adding 'Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T12:26:07,118 adding 'Mikado/utilities/intervaltree.pyx' 2025-09-08T12:26:07,119 adding 'Mikado/utilities/log_utils.py' 2025-09-08T12:26:07,151 adding 'Mikado/utilities/overlap.c' 2025-09-08T12:26:07,201 adding 'Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T12:26:07,204 adding 'Mikado/utilities/overlap.pxd' 2025-09-08T12:26:07,204 adding 'Mikado/utilities/overlap.pyx' 2025-09-08T12:26:07,205 adding 'mikado-1.2.2.data/scripts/add_transcript_feature_to_gtf.py' 2025-09-08T12:26:07,206 adding 'mikado-1.2.2.data/scripts/align_collect.py' 2025-09-08T12:26:07,207 adding 'mikado-1.2.2.data/scripts/analyse_metrics.py' 2025-09-08T12:26:07,207 adding 'mikado-1.2.2.data/scripts/asm_collect.py' 2025-09-08T12:26:07,208 adding 'mikado-1.2.2.data/scripts/bam2gtf.py' 2025-09-08T12:26:07,209 adding 'mikado-1.2.2.data/scripts/calculate_distances.py' 2025-09-08T12:26:07,210 adding 'mikado-1.2.2.data/scripts/class_run.py' 2025-09-08T12:26:07,211 adding 'mikado-1.2.2.data/scripts/convert_cdna_match_gff3.py' 2025-09-08T12:26:07,212 adding 'mikado-1.2.2.data/scripts/create_model.py' 2025-09-08T12:26:07,213 adding 'mikado-1.2.2.data/scripts/extract_promoter_regions.py' 2025-09-08T12:26:07,214 adding 'mikado-1.2.2.data/scripts/getFastaFromIds.py' 2025-09-08T12:26:07,214 adding 'mikado-1.2.2.data/scripts/gffjunc_to_bed12.py' 2025-09-08T12:26:07,215 adding 'mikado-1.2.2.data/scripts/grep.py' 2025-09-08T12:26:07,216 adding 'mikado-1.2.2.data/scripts/merge_junction_bed12.py' 2025-09-08T12:26:07,217 adding 'mikado-1.2.2.data/scripts/remove_from_embl.py' 2025-09-08T12:26:07,217 adding 'mikado-1.2.2.data/scripts/remove_utrs.py' 2025-09-08T12:26:07,218 adding 'mikado-1.2.2.data/scripts/sanitize_blast_db.py' 2025-09-08T12:26:07,219 adding 'mikado-1.2.2.data/scripts/self_training.py' 2025-09-08T12:26:07,220 adding 'mikado-1.2.2.data/scripts/split_fasta.py' 2025-09-08T12:26:07,221 adding 'mikado-1.2.2.data/scripts/tease_maker_apart.py' 2025-09-08T12:26:07,222 adding 'mikado-1.2.2.data/scripts/trim_long_introns.py' 2025-09-08T12:26:07,223 adding 'mikado-1.2.2.dist-info/licenses/AUTHORS' 2025-09-08T12:26:07,224 adding 'mikado-1.2.2.dist-info/METADATA' 2025-09-08T12:26:07,224 adding 'mikado-1.2.2.dist-info/WHEEL' 2025-09-08T12:26:07,224 adding 'mikado-1.2.2.dist-info/entry_points.txt' 2025-09-08T12:26:07,225 adding 'mikado-1.2.2.dist-info/top_level.txt' 2025-09-08T12:26:07,229 adding 'mikado-1.2.2.dist-info/RECORD' 2025-09-08T12:26:07,232 removing build/bdist.linux-armv7l/wheel 2025-09-08T12:26:07,394 Building wheel for mikado (setup.py): finished with status 'done' 2025-09-08T12:26:07,577 Created wheel for mikado: filename=mikado-1.2.2-cp313-cp313-linux_armv7l.whl size=17764169 sha256=d92d3cf3fb8f35a4d630611be308ecb5dcb57238929afe01c3aed7086244f706 2025-09-08T12:26:07,578 Stored in directory: /tmp/pip-ephem-wheel-cache-pvy21i8a/wheels/29/bd/f8/17f10884a7c8c3cdc2f4d9c71579c3abdf97c9ada4b8eaacf3 2025-09-08T12:26:07,592 Successfully built mikado 2025-09-08T12:26:07,628 Removed build tracker: '/tmp/pip-build-tracker-9obldxg4'