2025-09-08T13:32:28,276 Created temporary directory: /tmp/pip-build-tracker-qiflpq6l 2025-09-08T13:32:28,277 Initialized build tracking at /tmp/pip-build-tracker-qiflpq6l 2025-09-08T13:32:28,277 Created build tracker: /tmp/pip-build-tracker-qiflpq6l 2025-09-08T13:32:28,277 Entered build tracker: /tmp/pip-build-tracker-qiflpq6l 2025-09-08T13:32:28,278 Created temporary directory: /tmp/pip-wheel-tye1l_13 2025-09-08T13:32:28,281 Created temporary directory: /tmp/pip-ephem-wheel-cache-f1ekypct 2025-09-08T13:32:28,339 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T13:32:28,342 2 location(s) to search for versions of mikado: 2025-09-08T13:32:28,342 * https://pypi.org/simple/mikado/ 2025-09-08T13:32:28,342 * https://www.piwheels.org/simple/mikado/ 2025-09-08T13:32:28,342 Fetching project page and analyzing links: https://pypi.org/simple/mikado/ 2025-09-08T13:32:28,342 Getting page https://pypi.org/simple/mikado/ 2025-09-08T13:32:28,343 Found index url https://pypi.org/simple/ 2025-09-08T13:32:28,416 Fetched page https://pypi.org/simple/mikado/ as application/vnd.pypi.simple.v1+json 2025-09-08T13:32:28,420 Found link https://files.pythonhosted.org/packages/e0/9f/c6c5da77e4164c37427bc069d92e83c8269cdf779a43501403ae837a24b3/Mikado-1.0.0b5.post1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b5.post1 2025-09-08T13:32:28,420 Found link https://files.pythonhosted.org/packages/8f/6c/ee9884cd930db5bfbee812ad1592a32127edbedf01cf28713eda06d5a9b1/Mikado-1.0.0b9.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b9 2025-09-08T13:32:28,421 Found link https://files.pythonhosted.org/packages/7d/c9/edc669907250923ca1113fa140d1965eb25691f57aaff891642d34aaf217/Mikado-1.0.0b10.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b10 2025-09-08T13:32:28,421 Found link https://files.pythonhosted.org/packages/69/15/3551e2856f041aefdd1505656aa8af26b1af04f8e1b4c0448f133724e1f4/Mikado-1.0.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0 2025-09-08T13:32:28,421 Found link https://files.pythonhosted.org/packages/c2/b9/41d0a6f2ebad5eab5bc183beca8de854b4187266c6674ae6da0d86053f63/Mikado-1.1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.1 2025-09-08T13:32:28,421 Found link https://files.pythonhosted.org/packages/40/3d/1158abded48d747b982a77c1badd0d718a174470cdecde82a313f3eb9d4f/Mikado-1.2.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2 2025-09-08T13:32:28,421 Found link https://files.pythonhosted.org/packages/9a/07/5d0790de2c40a36826ac078bf4f7bf62e1fd5848411a784e7eef9fd673c4/Mikado-1.2.1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.1 2025-09-08T13:32:28,422 Found link https://files.pythonhosted.org/packages/35/a8/73f0dfa3062e3744b27ba7dd4c0bfc6af9b23da38c4c0ce8c7d5b27b0757/Mikado-1.2.2.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.2 2025-09-08T13:32:28,422 Skipping link: No binaries permitted for mikado: https://files.pythonhosted.org/packages/f6/7f/d791fd6b5667bf18f4e167803a05fe5c389722ca954dea524259e08121e1/Mikado-1.2.4-cp36-cp36m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/mikado/) 2025-09-08T13:32:28,422 Found link https://files.pythonhosted.org/packages/fc/2d/cc88561deaa5c1b4425855cd821253c68353ed787c7c63dc0f4ea155927e/Mikado-1.2.4.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.4 2025-09-08T13:32:28,422 Found link https://files.pythonhosted.org/packages/36/12/08d60892041a13f4bd13a486fb510844a8ed99961df828e7509e394904e6/Mikado-2.0rc1.tar.gz (from https://pypi.org/simple/mikado/), version: 2.0rc1 2025-09-08T13:32:28,422 Found link https://files.pythonhosted.org/packages/ba/bf/b9a01f43d67eacafe2deea77708497e8523b9cbc9c08d1da4bade64fdb99/Mikado-2.0rc2.tar.gz (from https://pypi.org/simple/mikado/), version: 2.0rc2 2025-09-08T13:32:28,423 Found link https://files.pythonhosted.org/packages/86/6d/f8b099f9637b38fd94c3f164f2c996765b579d2eae62cda48a04f108edb1/Mikado-2.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0 2025-09-08T13:32:28,423 Found link https://files.pythonhosted.org/packages/2e/33/25f4ffb7a3fb20eb2d68ebbb4547dc7c2a26f6c5576a29cca8ba3981a753/Mikado-2.0.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0.1 2025-09-08T13:32:28,424 Found link https://files.pythonhosted.org/packages/3a/6e/c589e961b797498aa99fe23634edda75166679cd2a381b0354a2d1d7b46f/Mikado-2.0.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0.2 2025-09-08T13:32:28,424 Found link https://files.pythonhosted.org/packages/96/ff/815427acc6fb277fe387f6bf7509ad8e374be65f557bbf1f8c7741b21e02/Mikado-2.1.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.1.0 2025-09-08T13:32:28,424 Found link https://files.pythonhosted.org/packages/13/49/571306c6f821dc029a1cb70472498bd9d25525d126f2084798a774f9e4ce/Mikado-2.1.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.1.1 2025-09-08T13:32:28,424 Found link https://files.pythonhosted.org/packages/88/25/93f4d40e98702547602916000e9e8dee101c4e072c29306fcbf9cb6a0797/Mikado-2.2.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.0 2025-09-08T13:32:28,424 Found link https://files.pythonhosted.org/packages/f5/4a/ea11bafcbd376966836c1a70d6500fc63839fe529e8d103df8771057750a/Mikado-2.2.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.1 2025-09-08T13:32:28,425 Found link https://files.pythonhosted.org/packages/d0/ba/88df54116a8a68de82bd668d6fa2189d4a26045b7e0437cdc50bfccf7002/Mikado-2.2.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.2 2025-09-08T13:32:28,425 Found link https://files.pythonhosted.org/packages/28/dd/dec1ae4c7519971dc80a780dde045fce221adffba00535e3ff26de7c29ba/Mikado-2.2.3.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.3 2025-09-08T13:32:28,425 Found link https://files.pythonhosted.org/packages/26/c2/021f128fc8733aa031191d140d26c992a0f62dbd0f974913c7245f208bcf/Mikado-2.2.4.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.2.4 2025-09-08T13:32:28,426 Found link https://files.pythonhosted.org/packages/30/57/69347e6f46b8845741045f2782a5f59bd1a650167bb6be3ddbd38c8c73c5/Mikado-2.2.5.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.2.5 2025-09-08T13:32:28,426 Found link https://files.pythonhosted.org/packages/09/d8/c98c1549bcbb7f37b93d69625d4228b6b6a29a0676e9dece16e3a6061ff6/Mikado-2.3.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.0 2025-09-08T13:32:28,426 Found link https://files.pythonhosted.org/packages/8c/7c/70149e3cca2d6e50f302d7615728ecaade107420be6c7f6b52d2c89135b1/Mikado-2.3.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.1 2025-09-08T13:32:28,426 Found link https://files.pythonhosted.org/packages/d1/90/5867a6616f873700d9bd599edbfefe142307d1c0dcefb02f8106bed2794d/Mikado-2.3.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.2 2025-09-08T13:32:28,427 Found link https://files.pythonhosted.org/packages/37/09/898b9cc9c310317368a4a0a71f818fab51a1f7bea5eee895284036116321/Mikado-2.3.3.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.3 2025-09-08T13:32:28,427 Found link https://files.pythonhosted.org/packages/7c/53/cbd94a6419cb6b85fe392f5e82b2270567a7f3fd3cf381f54f9bd080d4b0/Mikado-2.3.4.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.4 2025-09-08T13:32:28,427 Fetching project page and analyzing links: https://www.piwheels.org/simple/mikado/ 2025-09-08T13:32:28,427 Getting page https://www.piwheels.org/simple/mikado/ 2025-09-08T13:32:28,428 Found index url https://www.piwheels.org/simple/ 2025-09-08T13:32:28,547 Fetched page https://www.piwheels.org/simple/mikado/ as text/html 2025-09-08T13:32:28,590 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp39-cp39-linux_armv6l.whl#sha256=eae7460c0e91feef77b9891ab838d346e9149481f59d271ace65691fd3fab322 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,590 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp39-cp39-linux_armv7l.whl#sha256=eae7460c0e91feef77b9891ab838d346e9149481f59d271ace65691fd3fab322 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,590 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp37-cp37m-linux_armv6l.whl#sha256=d200ed2b907ce98c298ab164a11c61552acec54fed7a727d944b8744bc9c87a5 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,590 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.4-cp37-cp37m-linux_armv7l.whl#sha256=d200ed2b907ce98c298ab164a11c61552acec54fed7a727d944b8744bc9c87a5 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,590 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp37-cp37m-linux_armv6l.whl#sha256=b860c76dd2aff5fb774ebbede86a08d05ca2bcc32e188e0a8fc6b3392e132b55 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,591 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp37-cp37m-linux_armv7l.whl#sha256=b860c76dd2aff5fb774ebbede86a08d05ca2bcc32e188e0a8fc6b3392e132b55 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,591 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp39-cp39-linux_armv6l.whl#sha256=8ae20fd6fa9134eaf3b4216aafe499dd03d080f1338d465f819e529b9448178b (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,591 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.3-cp39-cp39-linux_armv7l.whl#sha256=8ae20fd6fa9134eaf3b4216aafe499dd03d080f1338d465f819e529b9448178b (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,591 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp37-cp37m-linux_armv6l.whl#sha256=0962ee8458a1d2c09e44acbf646c97dfbbaacb80b1cbc5e1e6546bc3175e9c6c (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,591 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp37-cp37m-linux_armv7l.whl#sha256=0962ee8458a1d2c09e44acbf646c97dfbbaacb80b1cbc5e1e6546bc3175e9c6c (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,591 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp39-cp39-linux_armv6l.whl#sha256=3ee48fa3d96deeb9e0a99617a0e99dca88fb69d47078393f8caa1f08fa35ce8a (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,591 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.2-cp39-cp39-linux_armv7l.whl#sha256=3ee48fa3d96deeb9e0a99617a0e99dca88fb69d47078393f8caa1f08fa35ce8a (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,592 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp37-cp37m-linux_armv6l.whl#sha256=fc848e6322df2e3611ca3722bcee0981f195f667bf874a7c6dcea0f9dc0ab731 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,592 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp37-cp37m-linux_armv7l.whl#sha256=fc848e6322df2e3611ca3722bcee0981f195f667bf874a7c6dcea0f9dc0ab731 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,592 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp39-cp39-linux_armv6l.whl#sha256=a38312d4ddc4abf2c34c1de984f3023e216cbaa455158a856480ae4d8e68c745 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,592 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.1-cp39-cp39-linux_armv7l.whl#sha256=a38312d4ddc4abf2c34c1de984f3023e216cbaa455158a856480ae4d8e68c745 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,592 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp37-cp37m-linux_armv6l.whl#sha256=4e8abcc783b98e290382b8ec0ee7f385c27700d5a9c1841a7bcae3ea507170a0 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,592 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp37-cp37m-linux_armv7l.whl#sha256=4e8abcc783b98e290382b8ec0ee7f385c27700d5a9c1841a7bcae3ea507170a0 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,593 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp39-cp39-linux_armv6l.whl#sha256=a041f4538b689653924bc0c7bdd03bb29fdda8143a60434de6e2d63aa67cd0c8 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,593 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.3.0-cp39-cp39-linux_armv7l.whl#sha256=a041f4538b689653924bc0c7bdd03bb29fdda8143a60434de6e2d63aa67cd0c8 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,593 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp37-cp37m-linux_armv6l.whl#sha256=5c409502210a8aefb7de44b86fb2ea2a309b92b91226e6b13d4d54725d171baf (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,593 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp37-cp37m-linux_armv7l.whl#sha256=5c409502210a8aefb7de44b86fb2ea2a309b92b91226e6b13d4d54725d171baf (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,593 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp39-cp39-linux_armv6l.whl#sha256=3f743cbc61207059885fe9a59589bf602a3f90a29738ac52092067a0e6422a50 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,593 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.5-cp39-cp39-linux_armv7l.whl#sha256=3f743cbc61207059885fe9a59589bf602a3f90a29738ac52092067a0e6422a50 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,593 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp37-cp37m-linux_armv6l.whl#sha256=0754ca2b8f81fbd6eb9ff228073ae59a24073e3f1b7b4ec29b0d65a71e0370a7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,594 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp37-cp37m-linux_armv7l.whl#sha256=0754ca2b8f81fbd6eb9ff228073ae59a24073e3f1b7b4ec29b0d65a71e0370a7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,594 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp39-cp39-linux_armv6l.whl#sha256=867f03bfe6e9cf06e29820272b9f451f30462c4287ebaebebe24b3ee358be321 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,594 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.4-cp39-cp39-linux_armv7l.whl#sha256=867f03bfe6e9cf06e29820272b9f451f30462c4287ebaebebe24b3ee358be321 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2025-09-08T13:32:28,594 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.2.3-cp37-cp37m-linux_armv6l.whl#sha256=0ca20e373c9e6bb78e52fcc63bd76ce297019dc0398a342552de37e05393ec0d (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T13:32:28,594 Skipping link: No binaries permitted for mikado: 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https://archive1.piwheels.org/simple/mikado/Mikado-2.0.2-cp37-cp37m-linux_armv7l.whl#sha256=2f415150126f13a761de3741431aeeeedc7de2714bf481b1082993ad77d07529 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T13:32:28,598 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.2-cp39-cp39-linux_armv6l.whl#sha256=d470f2f06b5088be5229fff70d2f2453c550acccfed8693854613b383c3c2ceb (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T13:32:28,598 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0.2-cp39-cp39-linux_armv7l.whl#sha256=d470f2f06b5088be5229fff70d2f2453c550acccfed8693854613b383c3c2ceb (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2025-09-08T13:32:28,598 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,600 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc2-cp39-cp39-linux_armv7l.whl#sha256=27d920e52482eb28c4c4915cd13022c57b6a2e9b24ab9cbb9c6fb84a57c86006 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,600 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc1-cp35-cp35m-linux_armv6l.whl#sha256=f0c146400dbcde6c6b2b4691d3519ee99863e2f9a5a53473bb658567431c4e58 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,600 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-2.0rc1-cp35-cp35m-linux_armv7l.whl#sha256=f0c146400dbcde6c6b2b4691d3519ee99863e2f9a5a53473bb658567431c4e58 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,600 Skipping link: No binaries permitted for mikado: 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https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,601 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp34-cp34m-linux_armv6l.whl#sha256=013fe7312e89e4ef0a1cefc59efd6deded6fe09a82e2684638461eefc0d15cec (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,601 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp34-cp34m-linux_armv7l.whl#sha256=013fe7312e89e4ef0a1cefc59efd6deded6fe09a82e2684638461eefc0d15cec (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,601 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp35-cp35m-linux_armv7l.whl#sha256=70805f9e31cbe895eb764eccf40b81eb7dbc61a65ff199ddbefdebde920c1447 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,601 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp35-cp35m-linux_armv6l.whl#sha256=70805f9e31cbe895eb764eccf40b81eb7dbc61a65ff199ddbefdebde920c1447 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,601 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp37-cp37m-linux_armv7l.whl#sha256=8a63835167df1009a262783fca90ce25f88aad46ebf235820d7f21cea9e27926 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,601 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp37-cp37m-linux_armv6l.whl#sha256=8a63835167df1009a262783fca90ce25f88aad46ebf235820d7f21cea9e27926 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,602 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp311-cp311-linux_armv6l.whl#sha256=f046bdaea4a2cf6889ea15964c360551b58427311379d68e8d438b673e4f4d97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,602 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.4-cp311-cp311-linux_armv7l.whl#sha256=f046bdaea4a2cf6889ea15964c360551b58427311379d68e8d438b673e4f4d97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,602 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp35-cp35m-linux_armv6l.whl#sha256=6e1e51e81057df0e2d693c84b108c9fc11c0b43b8f11118797d73d7838a9eb6d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,602 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp35-cp35m-linux_armv7l.whl#sha256=6e1e51e81057df0e2d693c84b108c9fc11c0b43b8f11118797d73d7838a9eb6d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,602 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp37-cp37m-linux_armv7l.whl#sha256=61a7b7c61f8476136a43f64ff77f3eedf70a72ac480343a833472539bb9be86a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,602 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp37-cp37m-linux_armv6l.whl#sha256=61a7b7c61f8476136a43f64ff77f3eedf70a72ac480343a833472539bb9be86a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,602 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp311-cp311-linux_armv6l.whl#sha256=69c57b0a7e661700c4d7c775e26f5acf8fc27f2732d78c6325ecbf52106b4225 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,603 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.2-cp311-cp311-linux_armv7l.whl#sha256=69c57b0a7e661700c4d7c775e26f5acf8fc27f2732d78c6325ecbf52106b4225 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,603 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2.2-cp313-cp313-linux_armv6l.whl#sha256=d92d3cf3fb8f35a4d630611be308ecb5dcb57238929afe01c3aed7086244f706 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,603 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2.2-cp313-cp313-linux_armv7l.whl#sha256=d92d3cf3fb8f35a4d630611be308ecb5dcb57238929afe01c3aed7086244f706 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,603 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp34-cp34m-linux_armv7l.whl#sha256=6302e3b12807435d38dfd802e1b8dc983feb6cea1b55db4e480aec539a5f85bc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,603 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp34-cp34m-linux_armv6l.whl#sha256=6302e3b12807435d38dfd802e1b8dc983feb6cea1b55db4e480aec539a5f85bc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,603 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp35-cp35m-linux_armv6l.whl#sha256=a39e49d25153534bd5c1e6574e84ed72e6814b12ed39527b7e329221e6f1b13d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,603 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp35-cp35m-linux_armv7l.whl#sha256=a39e49d25153534bd5c1e6574e84ed72e6814b12ed39527b7e329221e6f1b13d (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,604 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=a2910227f92bec48ad32c61c404cd1b8637bede7fbd684ae3d64df57bbe5ac7b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,604 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=a2910227f92bec48ad32c61c404cd1b8637bede7fbd684ae3d64df57bbe5ac7b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,604 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=02f84927b3a911dd345525ca16e3ca1e880528ab03a545543f33a9cfb49c5f4e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,604 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=02f84927b3a911dd345525ca16e3ca1e880528ab03a545543f33a9cfb49c5f4e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,604 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2.1-cp313-cp313-linux_armv6l.whl#sha256=c0fc68d1c17cc21df85983efdc5535fbb687578f4bcf3287212e41d53d625bb9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,604 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2.1-cp313-cp313-linux_armv7l.whl#sha256=c0fc68d1c17cc21df85983efdc5535fbb687578f4bcf3287212e41d53d625bb9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,604 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp35-cp35m-linux_armv7l.whl#sha256=dae54e57e5b7f3185e90e47fa278840a38f8c98d49a7a337b29951bec33ece13 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,605 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp35-cp35m-linux_armv6l.whl#sha256=dae54e57e5b7f3185e90e47fa278840a38f8c98d49a7a337b29951bec33ece13 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,605 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp34-cp34m-linux_armv6l.whl#sha256=4bb34a1ae37485284a0661c2a6a7f1094636a0372a859dcd87d7c0aad94c91cd (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,605 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp34-cp34m-linux_armv7l.whl#sha256=4bb34a1ae37485284a0661c2a6a7f1094636a0372a859dcd87d7c0aad94c91cd (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,605 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp37-cp37m-linux_armv6l.whl#sha256=5a5abadadc716ff22023b6f44b03a9e8049fac6667df41dbf611f0597708a9b7 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,605 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp37-cp37m-linux_armv7l.whl#sha256=5a5abadadc716ff22023b6f44b03a9e8049fac6667df41dbf611f0597708a9b7 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,605 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp311-cp311-linux_armv6l.whl#sha256=8cb994b5e0b5076b40fd77ebadda7a599cb19d680ca175eba47f43e372701c97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,605 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp311-cp311-linux_armv7l.whl#sha256=8cb994b5e0b5076b40fd77ebadda7a599cb19d680ca175eba47f43e372701c97 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,606 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp39-cp39-linux_armv6l.whl#sha256=dfcb87da8afbf3806c9ba6ac00eb3fcc32717eecd66839e3981624e0c83102b9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,606 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.2-cp39-cp39-linux_armv7l.whl#sha256=dfcb87da8afbf3806c9ba6ac00eb3fcc32717eecd66839e3981624e0c83102b9 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,606 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2-cp313-cp313-linux_armv6l.whl#sha256=b63a957bbb27cd561f5370b31d5c05479d9eb8d059d348d126bf884f10ca2121 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,606 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.2-cp313-cp313-linux_armv7l.whl#sha256=b63a957bbb27cd561f5370b31d5c05479d9eb8d059d348d126bf884f10ca2121 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,606 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp34-cp34m-linux_armv6l.whl#sha256=ad148a2be64148656d9fd55c8a2767fb7b93b5c4f225dd7f44bc45c779afe4ca (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,606 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp34-cp34m-linux_armv7l.whl#sha256=ad148a2be64148656d9fd55c8a2767fb7b93b5c4f225dd7f44bc45c779afe4ca (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,606 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp35-cp35m-linux_armv6l.whl#sha256=15e4b722560a6b03960c443290d2e84fc46dfb6eef983541141cec45292a850e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,607 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp35-cp35m-linux_armv7l.whl#sha256=15e4b722560a6b03960c443290d2e84fc46dfb6eef983541141cec45292a850e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,607 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp311-cp311-linux_armv6l.whl#sha256=cc5c48ef960792f6929b69b2545baa144ec96b108c7bb51057f8a127f5cf5c31 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,607 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.1-cp311-cp311-linux_armv7l.whl#sha256=cc5c48ef960792f6929b69b2545baa144ec96b108c7bb51057f8a127f5cf5c31 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,607 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.1-cp313-cp313-linux_armv6l.whl#sha256=cc5aaceaf7fdd95eaabce55d720dfd1f5d3fbcd4d6c286fe1159d54cd58aee5b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,607 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.1-cp313-cp313-linux_armv7l.whl#sha256=cc5aaceaf7fdd95eaabce55d720dfd1f5d3fbcd4d6c286fe1159d54cd58aee5b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,607 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp35-cp35m-linux_armv7l.whl#sha256=a8d63c41eb54392f132fadff33c5b18e9f67778562711eb50caa98dcbe7f1f84 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,607 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp35-cp35m-linux_armv6l.whl#sha256=a8d63c41eb54392f132fadff33c5b18e9f67778562711eb50caa98dcbe7f1f84 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,607 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp311-cp311-linux_armv6l.whl#sha256=feb40aaa79ce035bee7e7b485c3f920f1f1dcf58ffff5e0305db6afebccbc9fb (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,608 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0-cp311-cp311-linux_armv7l.whl#sha256=feb40aaa79ce035bee7e7b485c3f920f1f1dcf58ffff5e0305db6afebccbc9fb (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,608 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0-cp313-cp313-linux_armv6l.whl#sha256=7b05ef72b23835adf1757bbd0efb0cd8d5f5e3f9b505e72a913aef68936edead (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,608 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0-cp313-cp313-linux_armv7l.whl#sha256=7b05ef72b23835adf1757bbd0efb0cd8d5f5e3f9b505e72a913aef68936edead (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,608 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp35-cp35m-linux_armv7l.whl#sha256=5efcb4a1b4a9e814f31e3ac913e4debb0c7eb4eb35328f9c1a7044a7d919efdc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,608 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp35-cp35m-linux_armv6l.whl#sha256=5efcb4a1b4a9e814f31e3ac913e4debb0c7eb4eb35328f9c1a7044a7d919efdc (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,608 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp311-cp311-linux_armv6l.whl#sha256=18be66f9bf4e8c24ff8fd2641ca6d9180948f738281c5967e141c01659a4076c (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,609 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp311-cp311-linux_armv7l.whl#sha256=18be66f9bf4e8c24ff8fd2641ca6d9180948f738281c5967e141c01659a4076c (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,609 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b10-cp313-cp313-linux_armv6l.whl#sha256=ffea753ff371f991add460bcf1ac33f764f959d104fbcee732e221437348aa03 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,609 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b10-cp313-cp313-linux_armv7l.whl#sha256=ffea753ff371f991add460bcf1ac33f764f959d104fbcee732e221437348aa03 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,609 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp35-cp35m-linux_armv7l.whl#sha256=20c5fe322f4783bf164ebe1856a68d1f05890b4df93d62a91e5a403942d99a08 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,609 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp35-cp35m-linux_armv6l.whl#sha256=20c5fe322f4783bf164ebe1856a68d1f05890b4df93d62a91e5a403942d99a08 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,609 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp311-cp311-linux_armv6l.whl#sha256=ed7e4964520403c9d79c191483d7a3d9ad8e0b35b77eae60f39cd0f1b5d70b0e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,609 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp311-cp311-linux_armv7l.whl#sha256=ed7e4964520403c9d79c191483d7a3d9ad8e0b35b77eae60f39cd0f1b5d70b0e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,609 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b9-cp313-cp313-linux_armv6l.whl#sha256=feed0441e01e5ed6abdde5aa63f32d8938e0f4396312cde18b80a225e942fe6a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,610 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b9-cp313-cp313-linux_armv7l.whl#sha256=feed0441e01e5ed6abdde5aa63f32d8938e0f4396312cde18b80a225e942fe6a (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,610 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp35-cp35m-linux_armv7l.whl#sha256=e42650c477a2db9d73486fb0c1ea7183280ccd2d216a8994a4620148d1208b6b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,610 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp35-cp35m-linux_armv6l.whl#sha256=e42650c477a2db9d73486fb0c1ea7183280ccd2d216a8994a4620148d1208b6b (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,610 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp37-cp37m-linux_armv7l.whl#sha256=ad15eb4f2ea89eef0f6fdfacdacafc0005a9554e350cc2e9da31cc8512dfdb15 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,610 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp37-cp37m-linux_armv6l.whl#sha256=ad15eb4f2ea89eef0f6fdfacdacafc0005a9554e350cc2e9da31cc8512dfdb15 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,610 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp311-cp311-linux_armv6l.whl#sha256=bf8598c676e5ac37decb6a90621ec401e89b7791374e961d544d8f1a924a317e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,610 Skipping link: No binaries permitted for mikado: https://archive1.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp311-cp311-linux_armv7l.whl#sha256=bf8598c676e5ac37decb6a90621ec401e89b7791374e961d544d8f1a924a317e (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,611 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b5.post1-cp313-cp313-linux_armv6l.whl#sha256=a484381081c56e7106e45ed0d641845f6c7386588a9564360e66d4259c2a30c2 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,611 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/mikado-1.0.0b5.post1-cp313-cp313-linux_armv7l.whl#sha256=a484381081c56e7106e45ed0d641845f6c7386588a9564360e66d4259c2a30c2 (from https://www.piwheels.org/simple/mikado/) 2025-09-08T13:32:28,611 Skipping link: not a file: https://www.piwheels.org/simple/mikado/ 2025-09-08T13:32:28,611 Skipping link: not a file: https://pypi.org/simple/mikado/ 2025-09-08T13:32:28,635 Given no hashes to check 1 links for project 'mikado': discarding no candidates 2025-09-08T13:32:28,636 Collecting mikado==1.2.4 2025-09-08T13:32:28,637 Created temporary directory: /tmp/pip-unpack-1tolkluo 2025-09-08T13:32:28,879 Downloading Mikado-1.2.4.tar.gz (19.9 MB) 2025-09-08T13:32:33,385 Added mikado==1.2.4 from https://files.pythonhosted.org/packages/fc/2d/cc88561deaa5c1b4425855cd821253c68353ed787c7c63dc0f4ea155927e/Mikado-1.2.4.tar.gz to build tracker '/tmp/pip-build-tracker-qiflpq6l' 2025-09-08T13:32:33,386 Running setup.py (path:/tmp/pip-wheel-tye1l_13/mikado_a2b605ac36fd499c96ba06e9741c2850/setup.py) egg_info for package mikado 2025-09-08T13:32:33,386 Created temporary directory: /tmp/pip-pip-egg-info-95zddw9v 2025-09-08T13:32:33,386 Preparing metadata (setup.py): started 2025-09-08T13:32:33,387 Running command python setup.py egg_info 2025-09-08T13:32:36,626 Compiling Mikado/utilities/overlap.pyx because it changed. 2025-09-08T13:32:36,626 Compiling Mikado/scales/f1.pyx because it changed. 2025-09-08T13:32:36,626 Compiling Mikado/scales/contrast.pyx because it changed. 2025-09-08T13:32:36,626 Compiling Mikado/utilities/intervaltree.pyx because it changed. 2025-09-08T13:32:36,626 [1/4] Cythonizing Mikado/scales/contrast.pyx 2025-09-08T13:32:36,626 [2/4] Cythonizing Mikado/scales/f1.pyx 2025-09-08T13:32:36,627 [3/4] Cythonizing Mikado/utilities/intervaltree.pyx 2025-09-08T13:32:36,627 [4/4] Cythonizing Mikado/utilities/overlap.pyx 2025-09-08T13:32:36,805 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T13:32:36,805 warnings.warn(msg) 2025-09-08T13:32:37,033 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T13:32:37,033 !! 2025-09-08T13:32:37,034 ******************************************************************************** 2025-09-08T13:32:37,034 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T13:32:37,034 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T13:32:37,034 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T13:32:37,034 ******************************************************************************** 2025-09-08T13:32:37,034 !! 2025-09-08T13:32:37,035 self._finalize_license_expression() 2025-09-08T13:32:37,110 running egg_info 2025-09-08T13:32:37,185 creating /tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info 2025-09-08T13:32:37,186 writing /tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info/PKG-INFO 2025-09-08T13:32:37,189 writing dependency_links to /tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info/dependency_links.txt 2025-09-08T13:32:37,190 writing entry points to /tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info/entry_points.txt 2025-09-08T13:32:37,193 writing requirements to /tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info/requires.txt 2025-09-08T13:32:37,193 writing top-level names to /tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info/top_level.txt 2025-09-08T13:32:37,193 writing manifest file '/tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info/SOURCES.txt' 2025-09-08T13:32:37,576 reading manifest file '/tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info/SOURCES.txt' 2025-09-08T13:32:37,577 reading manifest template 'MANIFEST.in' 2025-09-08T13:32:37,739 warning: no previously-included files matching '*' found under directory 'docs' 2025-09-08T13:32:37,739 adding license file 'AUTHORS' 2025-09-08T13:32:37,785 writing manifest file '/tmp/pip-pip-egg-info-95zddw9v/Mikado.egg-info/SOURCES.txt' 2025-09-08T13:32:38,100 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T13:32:38,104 Source in /tmp/pip-wheel-tye1l_13/mikado_a2b605ac36fd499c96ba06e9741c2850 has version 1.2.4, which satisfies requirement mikado==1.2.4 from https://files.pythonhosted.org/packages/fc/2d/cc88561deaa5c1b4425855cd821253c68353ed787c7c63dc0f4ea155927e/Mikado-1.2.4.tar.gz 2025-09-08T13:32:38,105 Removed mikado==1.2.4 from https://files.pythonhosted.org/packages/fc/2d/cc88561deaa5c1b4425855cd821253c68353ed787c7c63dc0f4ea155927e/Mikado-1.2.4.tar.gz from build tracker '/tmp/pip-build-tracker-qiflpq6l' 2025-09-08T13:32:38,116 Created temporary directory: /tmp/pip-unpack-br8pqdyu 2025-09-08T13:32:38,116 Created temporary directory: /tmp/pip-unpack-adzv53ir 2025-09-08T13:32:38,116 Building wheels for collected packages: mikado 2025-09-08T13:32:38,118 Created temporary directory: /tmp/pip-wheel-xgt5hz63 2025-09-08T13:32:38,118 DEPRECATION: Building 'mikado' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'mikado'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T13:32:38,119 Building wheel for mikado (setup.py): started 2025-09-08T13:32:38,120 Destination directory: /tmp/pip-wheel-xgt5hz63 2025-09-08T13:32:38,120 Running command python setup.py bdist_wheel 2025-09-08T13:32:39,352 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-08T13:32:39,352 warnings.warn(msg) 2025-09-08T13:32:39,578 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T13:32:39,578 !! 2025-09-08T13:32:39,578 ******************************************************************************** 2025-09-08T13:32:39,578 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T13:32:39,578 License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) 2025-09-08T13:32:39,579 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T13:32:39,579 ******************************************************************************** 2025-09-08T13:32:39,579 !! 2025-09-08T13:32:39,579 self._finalize_license_expression() 2025-09-08T13:32:39,579 running bdist_wheel 2025-09-08T13:32:39,950 running build 2025-09-08T13:32:39,950 running build_py 2025-09-08T13:32:40,029 creating build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T13:32:40,029 copying Mikado/exceptions.py -> build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T13:32:40,030 copying Mikado/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T13:32:40,030 copying Mikado/version.py -> build/lib.linux-armv7l-cpython-313/Mikado 2025-09-08T13:32:40,031 creating build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,031 copying Mikado/loci/excluded.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,032 copying Mikado/loci/reference_gene.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,033 copying Mikado/loci/locus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,033 copying Mikado/loci/abstractlocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,034 copying Mikado/loci/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,035 copying Mikado/loci/superlocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,035 copying Mikado/loci/monosublocusholder.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,036 copying Mikado/loci/sublocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,037 copying Mikado/loci/monosublocus.py -> build/lib.linux-armv7l-cpython-313/Mikado/loci 2025-09-08T13:32:40,037 creating build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T13:32:40,038 copying Mikado/preparation/prepare.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T13:32:40,038 copying Mikado/preparation/annotation_parser.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T13:32:40,039 copying Mikado/preparation/checking.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T13:32:40,039 copying Mikado/preparation/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/preparation 2025-09-08T13:32:40,040 creating build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T13:32:40,040 copying Mikado/daijin/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T13:32:40,041 creating build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T13:32:40,041 copying Mikado/serializers/external.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T13:32:40,042 copying Mikado/serializers/junction.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T13:32:40,043 copying Mikado/serializers/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T13:32:40,043 copying Mikado/serializers/orf.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers 2025-09-08T13:32:40,044 creating build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,044 copying Mikado/utilities/dbutils.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,045 copying Mikado/utilities/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,045 copying Mikado/utilities/log_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,046 creating build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,046 copying Mikado/scales/compare.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,047 copying Mikado/scales/assigner.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,048 copying Mikado/scales/class_codes.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,048 copying Mikado/scales/accountant.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,049 copying Mikado/scales/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,049 copying Mikado/scales/resultstorer.py -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,050 creating build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T13:32:40,050 copying Mikado/picking/loci_processer.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T13:32:40,051 copying Mikado/picking/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T13:32:40,051 copying Mikado/picking/picker.py -> build/lib.linux-armv7l-cpython-313/Mikado/picking 2025-09-08T13:32:40,053 creating build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,053 copying Mikado/tests/test_gene.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,054 copying Mikado/tests/test_clique_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,054 copying Mikado/tests/assigner_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,055 copying Mikado/tests/test_json.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,056 copying Mikado/tests/test_bed12.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,056 copying Mikado/tests/test_serialisation.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,057 copying Mikado/tests/parser_testing.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,057 copying Mikado/tests/test_transcript_checker.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,058 copying Mikado/tests/transcript_tester_single.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,058 copying Mikado/tests/orf_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,059 copying Mikado/tests/test_db_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,060 copying Mikado/tests/locus_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,060 copying Mikado/tests/test_splitting.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,061 copying Mikado/tests/test_invalid_orfs.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,062 copying Mikado/tests/utilities_tester.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,062 copying Mikado/tests/test_blast_related.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,063 copying Mikado/tests/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,063 copying Mikado/tests/test_transcript_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,064 copying Mikado/tests/intervaltree_tests.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,064 copying Mikado/tests/test_external_scores.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,065 copying Mikado/tests/test_modifications.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,065 copying Mikado/tests/transcript_tester_negative.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,066 copying Mikado/tests/test_metrics.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,066 copying Mikado/tests/transcript_tester_positive.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,067 copying Mikado/tests/test_system_calls.py -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,068 creating build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T13:32:40,068 copying Mikado/parsers/GFF.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T13:32:40,069 copying Mikado/parsers/GTF.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T13:32:40,070 copying Mikado/parsers/blast_xml.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T13:32:40,070 copying Mikado/parsers/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T13:32:40,071 copying Mikado/parsers/gfannotation.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T13:32:40,071 copying Mikado/parsers/blast_utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T13:32:40,072 copying Mikado/parsers/bed12.py -> build/lib.linux-armv7l-cpython-313/Mikado/parsers 2025-09-08T13:32:40,073 creating build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T13:32:40,073 copying Mikado/transcripts/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T13:32:40,074 copying Mikado/transcripts/transcriptchecker.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T13:32:40,074 copying Mikado/transcripts/clique_methods.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T13:32:40,075 copying Mikado/transcripts/transcript.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts 2025-09-08T13:32:40,076 creating build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T13:32:40,076 copying Mikado/configuration/configurator.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T13:32:40,077 copying Mikado/configuration/daijin_configurator.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T13:32:40,077 copying Mikado/configuration/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T13:32:40,078 creating build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T13:32:40,078 copying Mikado/subprograms/prepare.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T13:32:40,079 copying Mikado/subprograms/__main__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T13:32:40,079 copying Mikado/subprograms/compare.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T13:32:40,080 copying Mikado/subprograms/serialise.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T13:32:40,081 copying Mikado/subprograms/pick.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T13:32:40,081 copying Mikado/subprograms/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T13:32:40,082 copying Mikado/subprograms/configure.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms 2025-09-08T13:32:40,083 creating build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T13:32:40,083 copying Mikado/serializers/blast_serializer/hit.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T13:32:40,083 copying Mikado/serializers/blast_serializer/xml_serialiser.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T13:32:40,084 copying Mikado/serializers/blast_serializer/target.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T13:32:40,085 copying Mikado/serializers/blast_serializer/utils.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T13:32:40,085 copying Mikado/serializers/blast_serializer/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T13:32:40,086 copying Mikado/serializers/blast_serializer/query.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T13:32:40,086 copying Mikado/serializers/blast_serializer/hsp.py -> build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer 2025-09-08T13:32:40,087 creating build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T13:32:40,087 copying Mikado/transcripts/transcript_methods/printing.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T13:32:40,088 copying Mikado/transcripts/transcript_methods/retrieval.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T13:32:40,088 copying Mikado/transcripts/transcript_methods/finalizing.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T13:32:40,089 copying Mikado/transcripts/transcript_methods/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T13:32:40,090 copying Mikado/transcripts/transcript_methods/splitting.py -> build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods 2025-09-08T13:32:40,091 creating build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,091 copying Mikado/subprograms/util/awk_gtf.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,091 copying Mikado/subprograms/util/class_codes.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,092 copying Mikado/subprograms/util/stats.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,093 copying Mikado/subprograms/util/trim.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,093 copying Mikado/subprograms/util/grep.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,094 copying Mikado/subprograms/util/__init__.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,094 copying Mikado/subprograms/util/convert.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,095 copying Mikado/subprograms/util/merge_blast.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,095 copying Mikado/subprograms/util/metrics.py -> build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util 2025-09-08T13:32:40,096 running egg_info 2025-09-08T13:32:40,172 writing Mikado.egg-info/PKG-INFO 2025-09-08T13:32:40,175 writing dependency_links to Mikado.egg-info/dependency_links.txt 2025-09-08T13:32:40,176 writing entry points to Mikado.egg-info/entry_points.txt 2025-09-08T13:32:40,179 writing requirements to Mikado.egg-info/requires.txt 2025-09-08T13:32:40,179 writing top-level names to Mikado.egg-info/top_level.txt 2025-09-08T13:32:40,267 reading manifest file 'Mikado.egg-info/SOURCES.txt' 2025-09-08T13:32:40,349 reading manifest template 'MANIFEST.in' 2025-09-08T13:32:40,526 adding license file 'AUTHORS' 2025-09-08T13:32:40,608 writing manifest file 'Mikado.egg-info/SOURCES.txt' 2025-09-08T13:32:40,682 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.configuration.scoring_files' is absent from the `packages` configuration. 2025-09-08T13:32:40,682 !! 2025-09-08T13:32:40,682 ******************************************************************************** 2025-09-08T13:32:40,682 ############################ 2025-09-08T13:32:40,682 # Package would be ignored # 2025-09-08T13:32:40,683 ############################ 2025-09-08T13:32:40,683 Python recognizes 'Mikado.configuration.scoring_files' as an importable package[^1], 2025-09-08T13:32:40,683 but it is absent from setuptools' `packages` configuration. 2025-09-08T13:32:40,683 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T13:32:40,683 package, please make sure that 'Mikado.configuration.scoring_files' is explicitly added 2025-09-08T13:32:40,683 to the `packages` configuration field. 2025-09-08T13:32:40,683 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T13:32:40,683 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T13:32:40,683 instead of `find_packages(...)`/`find:`). 2025-09-08T13:32:40,684 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T13:32:40,684 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T13:32:40,684 If you don't want 'Mikado.configuration.scoring_files' to be distributed and are 2025-09-08T13:32:40,684 already explicitly excluding 'Mikado.configuration.scoring_files' via 2025-09-08T13:32:40,684 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T13:32:40,684 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T13:32:40,684 combination with a more fine grained `package-data` configuration. 2025-09-08T13:32:40,684 You can read more about "package data files" on setuptools documentation page: 2025-09-08T13:32:40,685 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T13:32:40,685 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T13:32:40,685 even if it does not contain any `.py` files. 2025-09-08T13:32:40,685 On the other hand, currently there is no concept of package data 2025-09-08T13:32:40,685 directory, all directories are treated like packages. 2025-09-08T13:32:40,685 ******************************************************************************** 2025-09-08T13:32:40,685 !! 2025-09-08T13:32:40,685 check.warn(importable) 2025-09-08T13:32:40,686 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.tests.__pycache__' is absent from the `packages` configuration. 2025-09-08T13:32:40,686 !! 2025-09-08T13:32:40,686 ******************************************************************************** 2025-09-08T13:32:40,686 ############################ 2025-09-08T13:32:40,686 # Package would be ignored # 2025-09-08T13:32:40,686 ############################ 2025-09-08T13:32:40,686 Python recognizes 'Mikado.tests.__pycache__' as an importable package[^1], 2025-09-08T13:32:40,686 but it is absent from setuptools' `packages` configuration. 2025-09-08T13:32:40,686 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T13:32:40,687 package, please make sure that 'Mikado.tests.__pycache__' is explicitly added 2025-09-08T13:32:40,687 to the `packages` configuration field. 2025-09-08T13:32:40,687 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T13:32:40,687 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T13:32:40,687 instead of `find_packages(...)`/`find:`). 2025-09-08T13:32:40,687 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T13:32:40,687 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T13:32:40,687 If you don't want 'Mikado.tests.__pycache__' to be distributed and are 2025-09-08T13:32:40,688 already explicitly excluding 'Mikado.tests.__pycache__' via 2025-09-08T13:32:40,688 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T13:32:40,688 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T13:32:40,688 combination with a more fine grained `package-data` configuration. 2025-09-08T13:32:40,688 You can read more about "package data files" on setuptools documentation page: 2025-09-08T13:32:40,688 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T13:32:40,688 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T13:32:40,688 even if it does not contain any `.py` files. 2025-09-08T13:32:40,689 On the other hand, currently there is no concept of package data 2025-09-08T13:32:40,689 directory, all directories are treated like packages. 2025-09-08T13:32:40,689 ******************************************************************************** 2025-09-08T13:32:40,689 !! 2025-09-08T13:32:40,689 check.warn(importable) 2025-09-08T13:32:40,689 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Mikado.tests.fusion_test' is absent from the `packages` configuration. 2025-09-08T13:32:40,689 !! 2025-09-08T13:32:40,689 ******************************************************************************** 2025-09-08T13:32:40,689 ############################ 2025-09-08T13:32:40,690 # Package would be ignored # 2025-09-08T13:32:40,690 ############################ 2025-09-08T13:32:40,690 Python recognizes 'Mikado.tests.fusion_test' as an importable package[^1], 2025-09-08T13:32:40,690 but it is absent from setuptools' `packages` configuration. 2025-09-08T13:32:40,690 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T13:32:40,690 package, please make sure that 'Mikado.tests.fusion_test' is explicitly added 2025-09-08T13:32:40,690 to the `packages` configuration field. 2025-09-08T13:32:40,690 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T13:32:40,690 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T13:32:40,690 instead of `find_packages(...)`/`find:`). 2025-09-08T13:32:40,691 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T13:32:40,691 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T13:32:40,691 If you don't want 'Mikado.tests.fusion_test' to be distributed and are 2025-09-08T13:32:40,691 already explicitly excluding 'Mikado.tests.fusion_test' via 2025-09-08T13:32:40,691 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T13:32:40,691 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T13:32:40,691 combination with a more fine grained `package-data` configuration. 2025-09-08T13:32:40,691 You can read more about "package data files" on setuptools documentation page: 2025-09-08T13:32:40,692 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T13:32:40,692 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T13:32:40,692 even if it does not contain any `.py` files. 2025-09-08T13:32:40,692 On the other hand, currently there is no concept of package data 2025-09-08T13:32:40,692 directory, all directories are treated like packages. 2025-09-08T13:32:40,692 ******************************************************************************** 2025-09-08T13:32:40,692 !! 2025-09-08T13:32:40,693 check.warn(importable) 2025-09-08T13:32:40,694 copying Mikado/daijin/example_config.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T13:32:40,695 copying Mikado/daijin/hpc.json -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T13:32:40,695 copying Mikado/daijin/hpc.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T13:32:40,696 copying Mikado/daijin/mikado.snakefile -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T13:32:40,696 copying Mikado/daijin/tr.snakefile -> build/lib.linux-armv7l-cpython-313/Mikado/daijin 2025-09-08T13:32:40,697 copying Mikado/utilities/intervaltree.c -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,701 copying Mikado/utilities/intervaltree.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,702 copying Mikado/utilities/overlap.c -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,704 copying Mikado/utilities/overlap.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,704 copying Mikado/utilities/overlap.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,705 copying Mikado/scales/contrast.c -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,708 copying Mikado/scales/contrast.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,708 copying Mikado/scales/contrast.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,709 copying Mikado/scales/f1.c -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,711 copying Mikado/scales/f1.pxd -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,711 copying Mikado/scales/f1.pyx -> build/lib.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:40,712 copying Mikado/tests/chr5.fas.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,741 copying Mikado/tests/configuration.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,742 copying Mikado/tests/cufflinks.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,742 copying Mikado/tests/genome.fai -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,743 copying Mikado/tests/junctions.bed -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,744 copying Mikado/tests/mikado.blast.asn.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,745 copying Mikado/tests/mikado.blast.xml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,750 copying Mikado/tests/mikado.db -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,756 copying Mikado/tests/mikado_prepared.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,757 copying Mikado/tests/plants.suspicious_requirement.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,758 copying Mikado/tests/scoring_only_cds.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,758 copying Mikado/tests/trinity.bed12 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,759 copying Mikado/tests/trinity.cDNA_match.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,759 copying Mikado/tests/trinity.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,760 copying Mikado/tests/trinity.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,761 copying Mikado/tests/trinity.match_matchpart.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,761 copying Mikado/tests/trinity_stats.txt -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,762 copying Mikado/tests/uniprot_sprot_plants.fasta.gz -> build/lib.linux-armv7l-cpython-313/Mikado/tests 2025-09-08T13:32:40,786 creating build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,786 copying Mikado/tests/__pycache__/__init__.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,787 copying Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,787 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,788 copying Mikado/tests/__pycache__/locus_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,789 copying Mikado/tests/__pycache__/orf_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,789 copying Mikado/tests/__pycache__/parser_testing.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,790 copying Mikado/tests/__pycache__/test_bed12.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,790 copying Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,791 copying Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,791 copying Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,792 copying Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,793 copying Mikado/tests/__pycache__/test_gene.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,793 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,794 copying Mikado/tests/__pycache__/test_json.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,794 copying Mikado/tests/__pycache__/test_metrics.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,795 copying Mikado/tests/__pycache__/test_modifications.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,795 copying Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,796 copying Mikado/tests/__pycache__/test_splitting.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,796 copying Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,797 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,798 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,798 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,799 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,799 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,800 copying Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc -> build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__ 2025-09-08T13:32:40,801 creating build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T13:32:40,801 copying Mikado/tests/fusion_test/fusion_test.log -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T13:32:40,801 copying Mikado/tests/fusion_test/fusion_test_pred.gtf -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T13:32:40,802 copying Mikado/tests/fusion_test/fusion_test_ref.gff3 -> build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test 2025-09-08T13:32:40,802 copying Mikado/configuration/configuration_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T13:32:40,803 copying Mikado/configuration/daijin_schema.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T13:32:40,804 copying Mikado/configuration/requirements_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T13:32:40,804 copying Mikado/configuration/scoring_blueprint.json -> build/lib.linux-armv7l-cpython-313/Mikado/configuration 2025-09-08T13:32:40,805 creating build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,805 copying Mikado/configuration/scoring_files/athaliana_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,806 copying Mikado/configuration/scoring_files/celegans_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,806 copying Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,807 copying Mikado/configuration/scoring_files/hsapiens_scoring.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,807 copying Mikado/configuration/scoring_files/human.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,808 copying Mikado/configuration/scoring_files/insects.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,808 copying Mikado/configuration/scoring_files/plants.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,809 copying Mikado/configuration/scoring_files/scerevisiae.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,809 copying Mikado/configuration/scoring_files/worm.yaml -> build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files 2025-09-08T13:32:40,814 running build_ext 2025-09-08T13:32:40,821 building 'Mikado.utilities.overlap' extension 2025-09-08T13:32:40,822 creating build/temp.linux-armv7l-cpython-313/Mikado/utilities 2025-09-08T13:32:40,823 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/utilities/overlap.c -o build/temp.linux-armv7l-cpython-313/Mikado/utilities/overlap.o 2025-09-08T13:32:44,836 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/utilities/overlap.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so 2025-09-08T13:32:44,952 building 'Mikado.scales.f1' extension 2025-09-08T13:32:44,953 creating build/temp.linux-armv7l-cpython-313/Mikado/scales 2025-09-08T13:32:44,953 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/scales/f1.c -o build/temp.linux-armv7l-cpython-313/Mikado/scales/f1.o 2025-09-08T13:32:48,269 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/scales/f1.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so 2025-09-08T13:32:48,379 building 'Mikado.scales.contrast' extension 2025-09-08T13:32:48,380 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/scales/contrast.c -o build/temp.linux-armv7l-cpython-313/Mikado/scales/contrast.o 2025-09-08T13:33:00,906 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/scales/contrast.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so 2025-09-08T13:33:01,029 building 'Mikado.utilities.intervaltree' extension 2025-09-08T13:33:01,030 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c Mikado/utilities/intervaltree.c -o build/temp.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.o 2025-09-08T13:33:20,820 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so 2025-09-08T13:33:20,960 running build_scripts 2025-09-08T13:33:20,960 creating build/scripts-3.13 2025-09-08T13:33:20,961 copying and adjusting util/asm_collect.py -> build/scripts-3.13 2025-09-08T13:33:20,962 copying and adjusting util/remove_from_embl.py -> build/scripts-3.13 2025-09-08T13:33:20,962 copying and adjusting util/create_model.py -> build/scripts-3.13 2025-09-08T13:33:20,964 copying util/tease_maker_apart.py -> build/scripts-3.13 2025-09-08T13:33:20,964 copying and adjusting util/bam2gtf.py -> build/scripts-3.13 2025-09-08T13:33:20,965 copying and adjusting util/getFastaFromIds.py -> build/scripts-3.13 2025-09-08T13:33:20,966 copying and adjusting util/extract_promoter_regions.py -> build/scripts-3.13 2025-09-08T13:33:20,967 copying and adjusting util/calculate_distances.py -> build/scripts-3.13 2025-09-08T13:33:20,967 copying and adjusting util/class_run.py -> build/scripts-3.13 2025-09-08T13:33:20,968 copying and adjusting util/split_fasta.py -> build/scripts-3.13 2025-09-08T13:33:20,969 copying and adjusting util/grep.py -> build/scripts-3.13 2025-09-08T13:33:20,969 copying and adjusting util/add_transcript_feature_to_gtf.py -> build/scripts-3.13 2025-09-08T13:33:20,970 copying and adjusting util/sanitize_blast_db.py -> build/scripts-3.13 2025-09-08T13:33:20,971 copying and adjusting util/analyse_metrics.py -> build/scripts-3.13 2025-09-08T13:33:20,971 copying and adjusting util/trim_long_introns.py -> build/scripts-3.13 2025-09-08T13:33:20,972 copying and adjusting util/self_training.py -> build/scripts-3.13 2025-09-08T13:33:20,973 copying and adjusting util/merge_junction_bed12.py -> build/scripts-3.13 2025-09-08T13:33:20,974 copying and adjusting util/remove_utrs.py -> build/scripts-3.13 2025-09-08T13:33:20,975 copying and adjusting util/align_collect.py -> build/scripts-3.13 2025-09-08T13:33:20,976 copying and adjusting util/gffjunc_to_bed12.py -> build/scripts-3.13 2025-09-08T13:33:20,976 copying and adjusting util/convert_cdna_match_gff3.py -> build/scripts-3.13 2025-09-08T13:33:20,977 changing mode of build/scripts-3.13/asm_collect.py from 644 to 755 2025-09-08T13:33:20,977 changing mode of build/scripts-3.13/remove_from_embl.py from 644 to 755 2025-09-08T13:33:20,978 changing mode of build/scripts-3.13/create_model.py from 644 to 755 2025-09-08T13:33:20,978 changing mode of build/scripts-3.13/tease_maker_apart.py from 644 to 755 2025-09-08T13:33:20,978 changing mode of build/scripts-3.13/bam2gtf.py from 644 to 755 2025-09-08T13:33:20,979 changing mode of build/scripts-3.13/getFastaFromIds.py from 644 to 755 2025-09-08T13:33:20,979 changing mode of build/scripts-3.13/extract_promoter_regions.py from 644 to 755 2025-09-08T13:33:20,979 changing mode of build/scripts-3.13/calculate_distances.py from 644 to 755 2025-09-08T13:33:20,980 changing mode of build/scripts-3.13/class_run.py from 644 to 755 2025-09-08T13:33:20,980 changing mode of build/scripts-3.13/split_fasta.py from 644 to 755 2025-09-08T13:33:20,980 changing mode of build/scripts-3.13/grep.py from 644 to 755 2025-09-08T13:33:20,981 changing mode of build/scripts-3.13/add_transcript_feature_to_gtf.py from 644 to 755 2025-09-08T13:33:20,981 changing mode of build/scripts-3.13/sanitize_blast_db.py from 644 to 755 2025-09-08T13:33:20,981 changing mode of build/scripts-3.13/analyse_metrics.py from 644 to 755 2025-09-08T13:33:20,981 changing mode of build/scripts-3.13/trim_long_introns.py from 644 to 755 2025-09-08T13:33:20,982 changing mode of build/scripts-3.13/self_training.py from 644 to 755 2025-09-08T13:33:20,982 changing mode of build/scripts-3.13/merge_junction_bed12.py from 644 to 755 2025-09-08T13:33:20,982 changing mode of build/scripts-3.13/remove_utrs.py from 644 to 755 2025-09-08T13:33:20,983 changing mode of build/scripts-3.13/align_collect.py from 644 to 755 2025-09-08T13:33:20,983 changing mode of build/scripts-3.13/gffjunc_to_bed12.py from 644 to 755 2025-09-08T13:33:20,983 changing mode of build/scripts-3.13/convert_cdna_match_gff3.py from 644 to 755 2025-09-08T13:33:21,125 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-08T13:33:21,126 !! 2025-09-08T13:33:21,126 ******************************************************************************** 2025-09-08T13:33:21,126 Please avoid running ``setup.py`` directly. 2025-09-08T13:33:21,126 Instead, use pypa/build, pypa/installer or other 2025-09-08T13:33:21,126 standards-based tools. 2025-09-08T13:33:21,126 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T13:33:21,126 or your builds will no longer be supported. 2025-09-08T13:33:21,127 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-08T13:33:21,127 ******************************************************************************** 2025-09-08T13:33:21,127 !! 2025-09-08T13:33:21,127 self.initialize_options() 2025-09-08T13:33:21,218 installing to build/bdist.linux-armv7l/wheel 2025-09-08T13:33:21,218 running install 2025-09-08T13:33:21,241 running install_lib 2025-09-08T13:33:21,316 creating build/bdist.linux-armv7l/wheel 2025-09-08T13:33:21,317 creating build/bdist.linux-armv7l/wheel/Mikado 2025-09-08T13:33:21,317 creating build/bdist.linux-armv7l/wheel/Mikado/subprograms 2025-09-08T13:33:21,317 creating build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2025-09-08T13:33:21,318 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/metrics.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,318 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/merge_blast.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,319 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/convert.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,319 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,319 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/grep.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,320 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/trim.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,320 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/stats.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,321 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/class_codes.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,321 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/util/awk_gtf.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms/util 2025-09-08T13:33:21,321 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/configure.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T13:33:21,322 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T13:33:21,322 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/pick.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T13:33:21,323 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/serialise.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T13:33:21,323 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/compare.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T13:33:21,324 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/__main__.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T13:33:21,324 copying build/lib.linux-armv7l-cpython-313/Mikado/subprograms/prepare.py -> build/bdist.linux-armv7l/wheel/./Mikado/subprograms 2025-09-08T13:33:21,325 creating build/bdist.linux-armv7l/wheel/Mikado/configuration 2025-09-08T13:33:21,325 creating build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2025-09-08T13:33:21,325 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/worm.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,326 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/scerevisiae.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,326 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/plants.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,326 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/insects.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,327 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/human.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,327 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/hsapiens_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,328 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,328 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/celegans_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,328 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_files/athaliana_scoring.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/configuration/scoring_files 2025-09-08T13:33:21,329 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/scoring_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T13:33:21,329 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/requirements_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T13:33:21,329 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/daijin_schema.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T13:33:21,330 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/configuration_blueprint.json -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T13:33:21,330 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T13:33:21,331 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/daijin_configurator.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T13:33:21,331 copying build/lib.linux-armv7l-cpython-313/Mikado/configuration/configurator.py -> build/bdist.linux-armv7l/wheel/./Mikado/configuration 2025-09-08T13:33:21,332 creating build/bdist.linux-armv7l/wheel/Mikado/transcripts 2025-09-08T13:33:21,332 creating build/bdist.linux-armv7l/wheel/Mikado/transcripts/transcript_methods 2025-09-08T13:33:21,332 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/splitting.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T13:33:21,333 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T13:33:21,333 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/finalizing.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T13:33:21,334 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/retrieval.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T13:33:21,334 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript_methods/printing.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts/transcript_methods 2025-09-08T13:33:21,335 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcript.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T13:33:21,336 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/clique_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T13:33:21,336 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/transcriptchecker.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T13:33:21,336 copying build/lib.linux-armv7l-cpython-313/Mikado/transcripts/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/transcripts 2025-09-08T13:33:21,337 creating build/bdist.linux-armv7l/wheel/Mikado/parsers 2025-09-08T13:33:21,337 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/bed12.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T13:33:21,338 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/blast_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T13:33:21,338 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/gfannotation.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T13:33:21,339 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T13:33:21,339 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/blast_xml.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T13:33:21,340 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/GTF.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T13:33:21,340 copying build/lib.linux-armv7l-cpython-313/Mikado/parsers/GFF.py -> build/bdist.linux-armv7l/wheel/./Mikado/parsers 2025-09-08T13:33:21,341 creating build/bdist.linux-armv7l/wheel/Mikado/tests 2025-09-08T13:33:21,341 creating build/bdist.linux-armv7l/wheel/Mikado/tests/fusion_test 2025-09-08T13:33:21,341 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test_ref.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T13:33:21,342 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test_pred.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T13:33:21,342 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/fusion_test/fusion_test.log -> build/bdist.linux-armv7l/wheel/./Mikado/tests/fusion_test 2025-09-08T13:33:21,343 creating build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2025-09-08T13:33:21,343 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,343 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,344 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,344 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,345 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,345 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,346 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,346 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_splitting.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,347 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,347 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_modifications.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,347 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_metrics.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,348 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_json.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,348 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,349 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_gene.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,349 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,349 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,350 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,350 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,350 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/test_bed12.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,351 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/parser_testing.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,351 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/orf_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,352 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/locus_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,352 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,353 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,353 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/./Mikado/tests/__pycache__ 2025-09-08T13:33:21,354 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/uniprot_sprot_plants.fasta.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,378 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity_stats.txt -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,378 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.match_matchpart.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,379 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,379 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,380 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.cDNA_match.gff3 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,380 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/trinity.bed12 -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,380 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/scoring_only_cds.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,381 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/plants.suspicious_requirement.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,381 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado_prepared.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,382 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.db -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,388 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.blast.xml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,393 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/mikado.blast.asn.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,394 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/junctions.bed -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,395 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/genome.fai -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,395 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/cufflinks.gtf -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,396 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/configuration.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,396 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/chr5.fas.gz -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,425 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_system_calls.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,425 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_positive.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,426 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_metrics.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,426 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_negative.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,427 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_modifications.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,427 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_external_scores.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,427 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/intervaltree_tests.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,428 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_transcript_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,428 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,428 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_blast_related.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,429 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/utilities_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,429 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_invalid_orfs.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,430 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_splitting.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,430 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/locus_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,431 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_db_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,431 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/orf_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,432 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/transcript_tester_single.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,432 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_transcript_checker.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,433 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/parser_testing.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,433 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_serialisation.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,433 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_bed12.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,434 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_json.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,434 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/assigner_tester.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,435 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_clique_methods.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,435 copying build/lib.linux-armv7l-cpython-313/Mikado/tests/test_gene.py -> build/bdist.linux-armv7l/wheel/./Mikado/tests 2025-09-08T13:33:21,436 creating build/bdist.linux-armv7l/wheel/Mikado/picking 2025-09-08T13:33:21,436 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/picker.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T13:33:21,437 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T13:33:21,437 copying build/lib.linux-armv7l-cpython-313/Mikado/picking/loci_processer.py -> build/bdist.linux-armv7l/wheel/./Mikado/picking 2025-09-08T13:33:21,438 creating build/bdist.linux-armv7l/wheel/Mikado/scales 2025-09-08T13:33:21,438 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,440 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,442 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,442 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,442 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/f1.c -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,444 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,445 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,445 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/contrast.c -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,447 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/resultstorer.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,448 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,448 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/accountant.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,449 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/class_codes.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,449 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/assigner.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,450 copying build/lib.linux-armv7l-cpython-313/Mikado/scales/compare.py -> build/bdist.linux-armv7l/wheel/./Mikado/scales 2025-09-08T13:33:21,450 creating build/bdist.linux-armv7l/wheel/Mikado/utilities 2025-09-08T13:33:21,451 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,455 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,456 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,457 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.pxd -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,457 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/overlap.c -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,459 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.pyx -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,459 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/intervaltree.c -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,463 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/log_utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,464 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,464 copying build/lib.linux-armv7l-cpython-313/Mikado/utilities/dbutils.py -> build/bdist.linux-armv7l/wheel/./Mikado/utilities 2025-09-08T13:33:21,465 creating build/bdist.linux-armv7l/wheel/Mikado/serializers 2025-09-08T13:33:21,465 creating build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2025-09-08T13:33:21,465 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/hsp.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T13:33:21,466 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/query.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T13:33:21,466 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T13:33:21,466 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/utils.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T13:33:21,467 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/target.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T13:33:21,467 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/xml_serialiser.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T13:33:21,468 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/blast_serializer/hit.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers/blast_serializer 2025-09-08T13:33:21,468 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/orf.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T13:33:21,468 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T13:33:21,469 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/junction.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T13:33:21,469 copying build/lib.linux-armv7l-cpython-313/Mikado/serializers/external.py -> build/bdist.linux-armv7l/wheel/./Mikado/serializers 2025-09-08T13:33:21,470 creating build/bdist.linux-armv7l/wheel/Mikado/daijin 2025-09-08T13:33:21,470 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/tr.snakefile -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T13:33:21,471 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/mikado.snakefile -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T13:33:21,471 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/hpc.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T13:33:21,471 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/hpc.json -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T13:33:21,472 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/example_config.yaml -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T13:33:21,472 copying build/lib.linux-armv7l-cpython-313/Mikado/daijin/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/daijin 2025-09-08T13:33:21,473 creating build/bdist.linux-armv7l/wheel/Mikado/preparation 2025-09-08T13:33:21,473 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T13:33:21,474 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/checking.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T13:33:21,474 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/annotation_parser.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T13:33:21,474 copying build/lib.linux-armv7l-cpython-313/Mikado/preparation/prepare.py -> build/bdist.linux-armv7l/wheel/./Mikado/preparation 2025-09-08T13:33:21,475 creating build/bdist.linux-armv7l/wheel/Mikado/loci 2025-09-08T13:33:21,475 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/monosublocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,476 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/sublocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,476 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/monosublocusholder.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,477 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/superlocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,477 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,478 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/abstractlocus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,478 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/locus.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,479 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/reference_gene.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,479 copying build/lib.linux-armv7l-cpython-313/Mikado/loci/excluded.py -> build/bdist.linux-armv7l/wheel/./Mikado/loci 2025-09-08T13:33:21,479 copying build/lib.linux-armv7l-cpython-313/Mikado/version.py -> build/bdist.linux-armv7l/wheel/./Mikado 2025-09-08T13:33:21,480 copying build/lib.linux-armv7l-cpython-313/Mikado/__init__.py -> build/bdist.linux-armv7l/wheel/./Mikado 2025-09-08T13:33:21,480 copying build/lib.linux-armv7l-cpython-313/Mikado/exceptions.py -> build/bdist.linux-armv7l/wheel/./Mikado 2025-09-08T13:33:21,481 running install_egg_info 2025-09-08T13:33:21,560 Copying Mikado.egg-info to build/bdist.linux-armv7l/wheel/./Mikado-1.2.4-py3.13.egg-info 2025-09-08T13:33:21,563 running install_scripts 2025-09-08T13:33:21,564 creating build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,564 copying build/scripts-3.13/convert_cdna_match_gff3.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,564 copying build/scripts-3.13/gffjunc_to_bed12.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,565 copying build/scripts-3.13/align_collect.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,565 copying build/scripts-3.13/remove_utrs.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,566 copying build/scripts-3.13/merge_junction_bed12.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,566 copying build/scripts-3.13/self_training.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,566 copying build/scripts-3.13/trim_long_introns.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,567 copying build/scripts-3.13/analyse_metrics.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,567 copying build/scripts-3.13/sanitize_blast_db.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,568 copying build/scripts-3.13/add_transcript_feature_to_gtf.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,568 copying build/scripts-3.13/grep.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,568 copying build/scripts-3.13/split_fasta.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,569 copying build/scripts-3.13/class_run.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,569 copying build/scripts-3.13/calculate_distances.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,569 copying build/scripts-3.13/extract_promoter_regions.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,570 copying build/scripts-3.13/getFastaFromIds.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,570 copying build/scripts-3.13/bam2gtf.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,570 copying build/scripts-3.13/tease_maker_apart.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,571 copying build/scripts-3.13/create_model.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,571 copying build/scripts-3.13/remove_from_embl.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,572 copying build/scripts-3.13/asm_collect.py -> build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts 2025-09-08T13:33:21,572 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/convert_cdna_match_gff3.py to 755 2025-09-08T13:33:21,572 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/gffjunc_to_bed12.py to 755 2025-09-08T13:33:21,572 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/align_collect.py to 755 2025-09-08T13:33:21,572 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/remove_utrs.py to 755 2025-09-08T13:33:21,572 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/merge_junction_bed12.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/self_training.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/trim_long_introns.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/analyse_metrics.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/sanitize_blast_db.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/add_transcript_feature_to_gtf.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/grep.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/split_fasta.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/class_run.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/calculate_distances.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/extract_promoter_regions.py to 755 2025-09-08T13:33:21,573 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/getFastaFromIds.py to 755 2025-09-08T13:33:21,574 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/bam2gtf.py to 755 2025-09-08T13:33:21,574 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/tease_maker_apart.py to 755 2025-09-08T13:33:21,574 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/create_model.py to 755 2025-09-08T13:33:21,574 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/remove_from_embl.py to 755 2025-09-08T13:33:21,574 changing mode of build/bdist.linux-armv7l/wheel/mikado-1.2.4.data/scripts/asm_collect.py to 755 2025-09-08T13:33:21,625 creating build/bdist.linux-armv7l/wheel/mikado-1.2.4.dist-info/WHEEL 2025-09-08T13:33:21,626 creating '/tmp/pip-wheel-xgt5hz63/mikado-1.2.4-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-08T13:33:21,628 adding 'Mikado/__init__.py' 2025-09-08T13:33:21,628 adding 'Mikado/exceptions.py' 2025-09-08T13:33:21,629 adding 'Mikado/version.py' 2025-09-08T13:33:21,630 adding 'Mikado/configuration/__init__.py' 2025-09-08T13:33:21,633 adding 'Mikado/configuration/configuration_blueprint.json' 2025-09-08T13:33:21,636 adding 'Mikado/configuration/configurator.py' 2025-09-08T13:33:21,637 adding 'Mikado/configuration/daijin_configurator.py' 2025-09-08T13:33:21,638 adding 'Mikado/configuration/daijin_schema.json' 2025-09-08T13:33:21,639 adding 'Mikado/configuration/requirements_blueprint.json' 2025-09-08T13:33:21,640 adding 'Mikado/configuration/scoring_blueprint.json' 2025-09-08T13:33:21,641 adding 'Mikado/configuration/scoring_files/athaliana_scoring.yaml' 2025-09-08T13:33:21,641 adding 'Mikado/configuration/scoring_files/celegans_scoring.yaml' 2025-09-08T13:33:21,642 adding 'Mikado/configuration/scoring_files/dmelanogaster_scoring.yaml' 2025-09-08T13:33:21,643 adding 'Mikado/configuration/scoring_files/hsapiens_scoring.yaml' 2025-09-08T13:33:21,644 adding 'Mikado/configuration/scoring_files/human.yaml' 2025-09-08T13:33:21,644 adding 'Mikado/configuration/scoring_files/insects.yaml' 2025-09-08T13:33:21,645 adding 'Mikado/configuration/scoring_files/plants.yaml' 2025-09-08T13:33:21,646 adding 'Mikado/configuration/scoring_files/scerevisiae.yaml' 2025-09-08T13:33:21,646 adding 'Mikado/configuration/scoring_files/worm.yaml' 2025-09-08T13:33:21,649 adding 'Mikado/daijin/__init__.py' 2025-09-08T13:33:21,650 adding 'Mikado/daijin/example_config.yaml' 2025-09-08T13:33:21,650 adding 'Mikado/daijin/hpc.json' 2025-09-08T13:33:21,651 adding 'Mikado/daijin/hpc.yaml' 2025-09-08T13:33:21,652 adding 'Mikado/daijin/mikado.snakefile' 2025-09-08T13:33:21,656 adding 'Mikado/daijin/tr.snakefile' 2025-09-08T13:33:21,657 adding 'Mikado/loci/__init__.py' 2025-09-08T13:33:21,663 adding 'Mikado/loci/abstractlocus.py' 2025-09-08T13:33:21,664 adding 'Mikado/loci/excluded.py' 2025-09-08T13:33:21,667 adding 'Mikado/loci/locus.py' 2025-09-08T13:33:21,668 adding 'Mikado/loci/monosublocus.py' 2025-09-08T13:33:21,670 adding 'Mikado/loci/monosublocusholder.py' 2025-09-08T13:33:21,672 adding 'Mikado/loci/reference_gene.py' 2025-09-08T13:33:21,674 adding 'Mikado/loci/sublocus.py' 2025-09-08T13:33:21,679 adding 'Mikado/loci/superlocus.py' 2025-09-08T13:33:21,680 adding 'Mikado/parsers/GFF.py' 2025-09-08T13:33:21,682 adding 'Mikado/parsers/GTF.py' 2025-09-08T13:33:21,683 adding 'Mikado/parsers/__init__.py' 2025-09-08T13:33:21,686 adding 'Mikado/parsers/bed12.py' 2025-09-08T13:33:21,688 adding 'Mikado/parsers/blast_utils.py' 2025-09-08T13:33:21,692 adding 'Mikado/parsers/blast_xml.py' 2025-09-08T13:33:21,693 adding 'Mikado/parsers/gfannotation.py' 2025-09-08T13:33:21,694 adding 'Mikado/picking/__init__.py' 2025-09-08T13:33:21,698 adding 'Mikado/picking/loci_processer.py' 2025-09-08T13:33:21,702 adding 'Mikado/picking/picker.py' 2025-09-08T13:33:21,703 adding 'Mikado/preparation/__init__.py' 2025-09-08T13:33:21,705 adding 'Mikado/preparation/annotation_parser.py' 2025-09-08T13:33:21,706 adding 'Mikado/preparation/checking.py' 2025-09-08T13:33:21,708 adding 'Mikado/preparation/prepare.py' 2025-09-08T13:33:21,709 adding 'Mikado/scales/__init__.py' 2025-09-08T13:33:21,712 adding 'Mikado/scales/accountant.py' 2025-09-08T13:33:21,716 adding 'Mikado/scales/assigner.py' 2025-09-08T13:33:21,718 adding 'Mikado/scales/class_codes.py' 2025-09-08T13:33:21,720 adding 'Mikado/scales/compare.py' 2025-09-08T13:33:21,770 adding 'Mikado/scales/contrast.c' 2025-09-08T13:33:21,891 adding 'Mikado/scales/contrast.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T13:33:21,895 adding 'Mikado/scales/contrast.pxd' 2025-09-08T13:33:21,898 adding 'Mikado/scales/contrast.pyx' 2025-09-08T13:33:21,929 adding 'Mikado/scales/f1.c' 2025-09-08T13:33:21,969 adding 'Mikado/scales/f1.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T13:33:21,971 adding 'Mikado/scales/f1.pxd' 2025-09-08T13:33:21,971 adding 'Mikado/scales/f1.pyx' 2025-09-08T13:33:21,972 adding 'Mikado/scales/resultstorer.py' 2025-09-08T13:33:21,973 adding 'Mikado/serializers/__init__.py' 2025-09-08T13:33:21,974 adding 'Mikado/serializers/external.py' 2025-09-08T13:33:21,975 adding 'Mikado/serializers/junction.py' 2025-09-08T13:33:21,977 adding 'Mikado/serializers/orf.py' 2025-09-08T13:33:21,977 adding 'Mikado/serializers/blast_serializer/__init__.py' 2025-09-08T13:33:21,978 adding 'Mikado/serializers/blast_serializer/hit.py' 2025-09-08T13:33:21,980 adding 'Mikado/serializers/blast_serializer/hsp.py' 2025-09-08T13:33:21,980 adding 'Mikado/serializers/blast_serializer/query.py' 2025-09-08T13:33:21,981 adding 'Mikado/serializers/blast_serializer/target.py' 2025-09-08T13:33:21,982 adding 'Mikado/serializers/blast_serializer/utils.py' 2025-09-08T13:33:21,985 adding 'Mikado/serializers/blast_serializer/xml_serialiser.py' 2025-09-08T13:33:21,986 adding 'Mikado/subprograms/__init__.py' 2025-09-08T13:33:21,987 adding 'Mikado/subprograms/__main__.py' 2025-09-08T13:33:21,988 adding 'Mikado/subprograms/compare.py' 2025-09-08T13:33:21,989 adding 'Mikado/subprograms/configure.py' 2025-09-08T13:33:21,991 adding 'Mikado/subprograms/pick.py' 2025-09-08T13:33:21,992 adding 'Mikado/subprograms/prepare.py' 2025-09-08T13:33:21,994 adding 'Mikado/subprograms/serialise.py' 2025-09-08T13:33:21,995 adding 'Mikado/subprograms/util/__init__.py' 2025-09-08T13:33:21,996 adding 'Mikado/subprograms/util/awk_gtf.py' 2025-09-08T13:33:21,997 adding 'Mikado/subprograms/util/class_codes.py' 2025-09-08T13:33:21,997 adding 'Mikado/subprograms/util/convert.py' 2025-09-08T13:33:21,998 adding 'Mikado/subprograms/util/grep.py' 2025-09-08T13:33:21,999 adding 'Mikado/subprograms/util/merge_blast.py' 2025-09-08T13:33:22,000 adding 'Mikado/subprograms/util/metrics.py' 2025-09-08T13:33:22,003 adding 'Mikado/subprograms/util/stats.py' 2025-09-08T13:33:22,004 adding 'Mikado/subprograms/util/trim.py' 2025-09-08T13:33:22,005 adding 'Mikado/tests/__init__.py' 2025-09-08T13:33:22,007 adding 'Mikado/tests/assigner_tester.py' 2025-09-08T13:33:22,872 adding 'Mikado/tests/chr5.fas.gz' 2025-09-08T13:33:22,923 adding 'Mikado/tests/configuration.yaml' 2025-09-08T13:33:22,925 adding 'Mikado/tests/cufflinks.gtf' 2025-09-08T13:33:22,925 adding 'Mikado/tests/genome.fai' 2025-09-08T13:33:22,926 adding 'Mikado/tests/intervaltree_tests.py' 2025-09-08T13:33:22,931 adding 'Mikado/tests/junctions.bed' 2025-09-08T13:33:22,936 adding 'Mikado/tests/locus_tester.py' 2025-09-08T13:33:22,961 adding 'Mikado/tests/mikado.blast.asn.gz' 2025-09-08T13:33:23,013 adding 'Mikado/tests/mikado.blast.xml' 2025-09-08T13:33:23,283 adding 'Mikado/tests/mikado.db' 2025-09-08T13:33:23,297 adding 'Mikado/tests/mikado_prepared.gtf' 2025-09-08T13:33:23,303 adding 'Mikado/tests/orf_tester.py' 2025-09-08T13:33:23,304 adding 'Mikado/tests/parser_testing.py' 2025-09-08T13:33:23,305 adding 'Mikado/tests/plants.suspicious_requirement.yaml' 2025-09-08T13:33:23,305 adding 'Mikado/tests/scoring_only_cds.yaml' 2025-09-08T13:33:23,306 adding 'Mikado/tests/test_bed12.py' 2025-09-08T13:33:23,307 adding 'Mikado/tests/test_blast_related.py' 2025-09-08T13:33:23,308 adding 'Mikado/tests/test_clique_methods.py' 2025-09-08T13:33:23,309 adding 'Mikado/tests/test_db_utils.py' 2025-09-08T13:33:23,309 adding 'Mikado/tests/test_external_scores.py' 2025-09-08T13:33:23,310 adding 'Mikado/tests/test_gene.py' 2025-09-08T13:33:23,311 adding 'Mikado/tests/test_invalid_orfs.py' 2025-09-08T13:33:23,312 adding 'Mikado/tests/test_json.py' 2025-09-08T13:33:23,313 adding 'Mikado/tests/test_metrics.py' 2025-09-08T13:33:23,313 adding 'Mikado/tests/test_modifications.py' 2025-09-08T13:33:23,314 adding 'Mikado/tests/test_serialisation.py' 2025-09-08T13:33:23,316 adding 'Mikado/tests/test_splitting.py' 2025-09-08T13:33:23,318 adding 'Mikado/tests/test_system_calls.py' 2025-09-08T13:33:23,320 adding 'Mikado/tests/test_transcript_checker.py' 2025-09-08T13:33:23,321 adding 'Mikado/tests/test_transcript_methods.py' 2025-09-08T13:33:23,323 adding 'Mikado/tests/transcript_tester_negative.py' 2025-09-08T13:33:23,326 adding 'Mikado/tests/transcript_tester_positive.py' 2025-09-08T13:33:23,329 adding 'Mikado/tests/transcript_tester_single.py' 2025-09-08T13:33:23,330 adding 'Mikado/tests/trinity.bed12' 2025-09-08T13:33:23,331 adding 'Mikado/tests/trinity.cDNA_match.gff3' 2025-09-08T13:33:23,333 adding 'Mikado/tests/trinity.gff3' 2025-09-08T13:33:23,335 adding 'Mikado/tests/trinity.gtf' 2025-09-08T13:33:23,336 adding 'Mikado/tests/trinity.match_matchpart.gff3' 2025-09-08T13:33:23,337 adding 'Mikado/tests/trinity_stats.txt' 2025-09-08T13:33:24,047 adding 'Mikado/tests/uniprot_sprot_plants.fasta.gz' 2025-09-08T13:33:24,089 adding 'Mikado/tests/utilities_tester.py' 2025-09-08T13:33:24,090 adding 'Mikado/tests/__pycache__/__init__.cpython-36.pyc' 2025-09-08T13:33:24,093 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-36.pyc' 2025-09-08T13:33:24,095 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-36.pyc' 2025-09-08T13:33:24,102 adding 'Mikado/tests/__pycache__/locus_tester.cpython-36.pyc' 2025-09-08T13:33:24,108 adding 'Mikado/tests/__pycache__/orf_tester.cpython-36.pyc' 2025-09-08T13:33:24,109 adding 'Mikado/tests/__pycache__/parser_testing.cpython-36.pyc' 2025-09-08T13:33:24,110 adding 'Mikado/tests/__pycache__/test_bed12.cpython-36.pyc' 2025-09-08T13:33:24,111 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-36.pyc' 2025-09-08T13:33:24,112 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-36.pyc' 2025-09-08T13:33:24,113 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-36.pyc' 2025-09-08T13:33:24,114 adding 'Mikado/tests/__pycache__/test_external_scores.cpython-36.pyc' 2025-09-08T13:33:24,114 adding 'Mikado/tests/__pycache__/test_gene.cpython-36.pyc' 2025-09-08T13:33:24,115 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-36.pyc' 2025-09-08T13:33:24,116 adding 'Mikado/tests/__pycache__/test_json.cpython-36.pyc' 2025-09-08T13:33:24,117 adding 'Mikado/tests/__pycache__/test_metrics.cpython-36.pyc' 2025-09-08T13:33:24,118 adding 'Mikado/tests/__pycache__/test_modifications.cpython-36.pyc' 2025-09-08T13:33:24,119 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-36.pyc' 2025-09-08T13:33:24,121 adding 'Mikado/tests/__pycache__/test_splitting.cpython-36.pyc' 2025-09-08T13:33:24,125 adding 'Mikado/tests/__pycache__/test_system_calls.cpython-36.pyc' 2025-09-08T13:33:24,126 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-36.pyc' 2025-09-08T13:33:24,128 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-36.pyc' 2025-09-08T13:33:24,131 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-36.pyc' 2025-09-08T13:33:24,135 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-36.pyc' 2025-09-08T13:33:24,138 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-36.pyc' 2025-09-08T13:33:24,139 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-36.pyc' 2025-09-08T13:33:24,140 adding 'Mikado/tests/fusion_test/fusion_test.log' 2025-09-08T13:33:24,141 adding 'Mikado/tests/fusion_test/fusion_test_pred.gtf' 2025-09-08T13:33:24,142 adding 'Mikado/tests/fusion_test/fusion_test_ref.gff3' 2025-09-08T13:33:24,142 adding 'Mikado/transcripts/__init__.py' 2025-09-08T13:33:24,144 adding 'Mikado/transcripts/clique_methods.py' 2025-09-08T13:33:24,154 adding 'Mikado/transcripts/transcript.py' 2025-09-08T13:33:24,156 adding 'Mikado/transcripts/transcriptchecker.py' 2025-09-08T13:33:24,157 adding 'Mikado/transcripts/transcript_methods/__init__.py' 2025-09-08T13:33:24,160 adding 'Mikado/transcripts/transcript_methods/finalizing.py' 2025-09-08T13:33:24,161 adding 'Mikado/transcripts/transcript_methods/printing.py' 2025-09-08T13:33:24,164 adding 'Mikado/transcripts/transcript_methods/retrieval.py' 2025-09-08T13:33:24,168 adding 'Mikado/transcripts/transcript_methods/splitting.py' 2025-09-08T13:33:24,169 adding 'Mikado/utilities/__init__.py' 2025-09-08T13:33:24,170 adding 'Mikado/utilities/dbutils.py' 2025-09-08T13:33:24,241 adding 'Mikado/utilities/intervaltree.c' 2025-09-08T13:33:24,459 adding 'Mikado/utilities/intervaltree.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T13:33:24,468 adding 'Mikado/utilities/intervaltree.pyx' 2025-09-08T13:33:24,469 adding 'Mikado/utilities/log_utils.py' 2025-09-08T13:33:24,500 adding 'Mikado/utilities/overlap.c' 2025-09-08T13:33:24,549 adding 'Mikado/utilities/overlap.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T13:33:24,552 adding 'Mikado/utilities/overlap.pxd' 2025-09-08T13:33:24,552 adding 'Mikado/utilities/overlap.pyx' 2025-09-08T13:33:24,553 adding 'mikado-1.2.4.data/scripts/add_transcript_feature_to_gtf.py' 2025-09-08T13:33:24,554 adding 'mikado-1.2.4.data/scripts/align_collect.py' 2025-09-08T13:33:24,555 adding 'mikado-1.2.4.data/scripts/analyse_metrics.py' 2025-09-08T13:33:24,555 adding 'mikado-1.2.4.data/scripts/asm_collect.py' 2025-09-08T13:33:24,556 adding 'mikado-1.2.4.data/scripts/bam2gtf.py' 2025-09-08T13:33:24,557 adding 'mikado-1.2.4.data/scripts/calculate_distances.py' 2025-09-08T13:33:24,558 adding 'mikado-1.2.4.data/scripts/class_run.py' 2025-09-08T13:33:24,559 adding 'mikado-1.2.4.data/scripts/convert_cdna_match_gff3.py' 2025-09-08T13:33:24,560 adding 'mikado-1.2.4.data/scripts/create_model.py' 2025-09-08T13:33:24,561 adding 'mikado-1.2.4.data/scripts/extract_promoter_regions.py' 2025-09-08T13:33:24,562 adding 'mikado-1.2.4.data/scripts/getFastaFromIds.py' 2025-09-08T13:33:24,563 adding 'mikado-1.2.4.data/scripts/gffjunc_to_bed12.py' 2025-09-08T13:33:24,563 adding 'mikado-1.2.4.data/scripts/grep.py' 2025-09-08T13:33:24,564 adding 'mikado-1.2.4.data/scripts/merge_junction_bed12.py' 2025-09-08T13:33:24,565 adding 'mikado-1.2.4.data/scripts/remove_from_embl.py' 2025-09-08T13:33:24,566 adding 'mikado-1.2.4.data/scripts/remove_utrs.py' 2025-09-08T13:33:24,566 adding 'mikado-1.2.4.data/scripts/sanitize_blast_db.py' 2025-09-08T13:33:24,568 adding 'mikado-1.2.4.data/scripts/self_training.py' 2025-09-08T13:33:24,568 adding 'mikado-1.2.4.data/scripts/split_fasta.py' 2025-09-08T13:33:24,569 adding 'mikado-1.2.4.data/scripts/tease_maker_apart.py' 2025-09-08T13:33:24,570 adding 'mikado-1.2.4.data/scripts/trim_long_introns.py' 2025-09-08T13:33:24,571 adding 'mikado-1.2.4.dist-info/licenses/AUTHORS' 2025-09-08T13:33:24,572 adding 'mikado-1.2.4.dist-info/METADATA' 2025-09-08T13:33:24,572 adding 'mikado-1.2.4.dist-info/WHEEL' 2025-09-08T13:33:24,573 adding 'mikado-1.2.4.dist-info/entry_points.txt' 2025-09-08T13:33:24,573 adding 'mikado-1.2.4.dist-info/top_level.txt' 2025-09-08T13:33:24,576 adding 'mikado-1.2.4.dist-info/RECORD' 2025-09-08T13:33:24,579 removing build/bdist.linux-armv7l/wheel 2025-09-08T13:33:24,741 Building wheel for mikado (setup.py): finished with status 'done' 2025-09-08T13:33:24,920 Created wheel for mikado: filename=mikado-1.2.4-cp313-cp313-linux_armv7l.whl size=17532315 sha256=7e2bc1c1bbd33dcdaffc6a4ac3251c30d7b12c84ee4b8660917adea052126bc3 2025-09-08T13:33:24,920 Stored in directory: /tmp/pip-ephem-wheel-cache-f1ekypct/wheels/b1/30/9c/408c44d887c04c239e7b640e32913895b06260f188fafd4427 2025-09-08T13:33:24,934 Successfully built mikado 2025-09-08T13:33:24,970 Removed build tracker: '/tmp/pip-build-tracker-qiflpq6l'