2025-09-08T14:17:20,505 Created temporary directory: /tmp/pip-build-tracker-_tixjjvd 2025-09-08T14:17:20,505 Initialized build tracking at /tmp/pip-build-tracker-_tixjjvd 2025-09-08T14:17:20,506 Created build tracker: /tmp/pip-build-tracker-_tixjjvd 2025-09-08T14:17:20,506 Entered build tracker: /tmp/pip-build-tracker-_tixjjvd 2025-09-08T14:17:20,506 Created temporary directory: /tmp/pip-wheel-ybe3rf7a 2025-09-08T14:17:20,509 Created temporary directory: /tmp/pip-ephem-wheel-cache-v_ni41pz 2025-09-08T14:17:20,568 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T14:17:20,570 2 location(s) to search for versions of ssw-aligner: 2025-09-08T14:17:20,570 * https://pypi.org/simple/ssw-aligner/ 2025-09-08T14:17:20,570 * https://www.piwheels.org/simple/ssw-aligner/ 2025-09-08T14:17:20,570 Fetching project page and analyzing links: https://pypi.org/simple/ssw-aligner/ 2025-09-08T14:17:20,571 Getting page https://pypi.org/simple/ssw-aligner/ 2025-09-08T14:17:20,572 Found index url https://pypi.org/simple/ 2025-09-08T14:17:20,717 Fetched page https://pypi.org/simple/ssw-aligner/ as application/vnd.pypi.simple.v1+json 2025-09-08T14:17:20,719 Found link https://files.pythonhosted.org/packages/26/c5/d6d45f897bcaabc6413b3eba32aceb83da292e4837d172fd478e679326ae/ssw_aligner-0.0.0.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.0 2025-09-08T14:17:20,719 Found link https://files.pythonhosted.org/packages/db/90/df5f1864262c4dfdca23700b93fd6f12e7525d050c2e3a059f756ce3cb5c/ssw_aligner-0.0.1.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.1 2025-09-08T14:17:20,720 Found link https://files.pythonhosted.org/packages/00/40/c2aee762db470efb345706da1fdafcba22fa9458f702f5867cbc2a2202f4/ssw_aligner-0.0.2.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.2 2025-09-08T14:17:20,720 Found link https://files.pythonhosted.org/packages/07/28/37a2fbf4b0bc91cc3d441524aec94dc8bb7a4f62fea679a6c25dbd3235c5/ssw_aligner-0.0.3.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.3 2025-09-08T14:17:20,720 Found link https://files.pythonhosted.org/packages/5c/c9/1b596cea0939fcde6549b0be70518b7bad3d23335006c5641438b3605813/ssw_aligner-0.0.4.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.4 2025-09-08T14:17:20,720 Found link https://files.pythonhosted.org/packages/96/3b/1fda982e7c2264d8164fd3cacd82a1a00de575a1eff68b3f86c578af2a7b/ssw_aligner-0.0.5.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.5 2025-09-08T14:17:20,721 Found link https://files.pythonhosted.org/packages/fe/60/131861d0d4250f27a65db140a09f8a208e5db084135ddbe7c7c580b45add/ssw_aligner-0.0.6.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.6 2025-09-08T14:17:20,721 Found link https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.7 2025-09-08T14:17:20,721 Found link https://files.pythonhosted.org/packages/77/9a/73d8f071e78956c30e012c3fc5f9735a0e28426dad0cb6fd534e26cdd7db/ssw_aligner-0.0.8.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.8 2025-09-08T14:17:20,722 Fetching project page and analyzing links: https://www.piwheels.org/simple/ssw-aligner/ 2025-09-08T14:17:20,722 Getting page https://www.piwheels.org/simple/ssw-aligner/ 2025-09-08T14:17:20,723 Found index url https://www.piwheels.org/simple/ 2025-09-08T14:17:20,824 Fetched page https://www.piwheels.org/simple/ssw-aligner/ as text/html 2025-09-08T14:17:20,825 Skipping link: not a file: https://www.piwheels.org/simple/ssw-aligner/ 2025-09-08T14:17:20,825 Skipping link: not a file: https://pypi.org/simple/ssw-aligner/ 2025-09-08T14:17:20,851 Given no hashes to check 1 links for project 'ssw-aligner': discarding no candidates 2025-09-08T14:17:20,852 Collecting ssw-aligner==0.0.0 2025-09-08T14:17:20,854 Created temporary directory: /tmp/pip-unpack-41zri98i 2025-09-08T14:17:20,995 Downloading ssw_aligner-0.0.0.tar.gz (101 kB) 2025-09-08T14:17:21,052 Added ssw-aligner==0.0.0 from https://files.pythonhosted.org/packages/26/c5/d6d45f897bcaabc6413b3eba32aceb83da292e4837d172fd478e679326ae/ssw_aligner-0.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-_tixjjvd' 2025-09-08T14:17:21,053 Running setup.py (path:/tmp/pip-wheel-ybe3rf7a/ssw-aligner_09573001a5f344f3ba42bd40515cd2b5/setup.py) egg_info for package ssw-aligner 2025-09-08T14:17:21,054 Created temporary directory: /tmp/pip-pip-egg-info-oqayka2c 2025-09-08T14:17:21,054 Preparing metadata (setup.py): started 2025-09-08T14:17:21,055 Running command python setup.py egg_info 2025-09-08T14:17:21,562 Traceback (most recent call last): 2025-09-08T14:17:21,563 File "", line 2, in 2025-09-08T14:17:21,563 exec(compile(''' 2025-09-08T14:17:21,563 ~~~~^^^^^^^^^^^^ 2025-09-08T14:17:21,563 # This is -- a caller that pip uses to run setup.py 2025-09-08T14:17:21,564 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,564 ...<32 lines>... 2025-09-08T14:17:21,564 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T14:17:21,564 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,564 ''' % ('/tmp/pip-wheel-ybe3rf7a/ssw-aligner_09573001a5f344f3ba42bd40515cd2b5/setup.py',), "", "exec")) 2025-09-08T14:17:21,564 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,564 File "", line 35, in 2025-09-08T14:17:21,564 File "/tmp/pip-wheel-ybe3rf7a/ssw-aligner_09573001a5f344f3ba42bd40515cd2b5/setup.py", line 18 2025-09-08T14:17:21,565 print np.get_include() 2025-09-08T14:17:21,565 ^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,565 SyntaxError: Missing parentheses in call to 'print'. Did you mean print(...)? 2025-09-08T14:17:21,649 ERROR: python setup.py egg_info exited with 1 2025-09-08T14:17:21,660 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T14:17:21,660 exec(compile('"'"''"'"''"'"' 2025-09-08T14:17:21,660 # This is -- a caller that pip uses to run setup.py 2025-09-08T14:17:21,660 # 2025-09-08T14:17:21,660 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T14:17:21,660 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T14:17:21,660 # - It provides a clear error message when setuptools is not installed. 2025-09-08T14:17:21,660 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T14:17:21,660 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T14:17:21,660 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T14:17:21,660 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T14:17:21,660 import os, sys, tokenize, traceback 2025-09-08T14:17:21,660 2025-09-08T14:17:21,660 try: 2025-09-08T14:17:21,660 import setuptools 2025-09-08T14:17:21,660 except ImportError: 2025-09-08T14:17:21,660 print( 2025-09-08T14:17:21,660 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T14:17:21,660 "the build environment with exception:", 2025-09-08T14:17:21,660 file=sys.stderr, 2025-09-08T14:17:21,660 ) 2025-09-08T14:17:21,660 traceback.print_exc() 2025-09-08T14:17:21,660 sys.exit(1) 2025-09-08T14:17:21,660 2025-09-08T14:17:21,660 __file__ = %r 2025-09-08T14:17:21,660 sys.argv[0] = __file__ 2025-09-08T14:17:21,660 2025-09-08T14:17:21,660 if os.path.exists(__file__): 2025-09-08T14:17:21,660 filename = __file__ 2025-09-08T14:17:21,660 with tokenize.open(__file__) as f: 2025-09-08T14:17:21,660 setup_py_code = f.read() 2025-09-08T14:17:21,660 else: 2025-09-08T14:17:21,660 filename = "" 2025-09-08T14:17:21,660 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T14:17:21,660 2025-09-08T14:17:21,660 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T14:17:21,660 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-ybe3rf7a/ssw-aligner_09573001a5f344f3ba42bd40515cd2b5/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-oqayka2c[/] 2025-09-08T14:17:21,661 [bold magenta]cwd[/]: /tmp/pip-wheel-ybe3rf7a/ssw-aligner_09573001a5f344f3ba42bd40515cd2b5/ 2025-09-08T14:17:21,661 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T14:17:21,662 ERROR: metadata generation failed 2025-09-08T14:17:21,667 Exception information: 2025-09-08T14:17:21,667 Traceback (most recent call last): 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T14:17:21,667 call_subprocess( 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~^ 2025-09-08T14:17:21,667 args, 2025-09-08T14:17:21,667 ^^^^^ 2025-09-08T14:17:21,667 ...<2 lines>... 2025-09-08T14:17:21,667 spinner=spinner, 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 ) 2025-09-08T14:17:21,667 ^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T14:17:21,667 raise error 2025-09-08T14:17:21,667 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T14:17:21,667 2025-09-08T14:17:21,667 The above exception was the direct cause of the following exception: 2025-09-08T14:17:21,667 2025-09-08T14:17:21,667 Traceback (most recent call last): 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T14:17:21,667 status = _inner_run() 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T14:17:21,667 return self.run(options, args) 2025-09-08T14:17:21,667 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T14:17:21,667 return func(self, options, args) 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T14:17:21,667 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T14:17:21,667 result = self._result = resolver.resolve( 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:21,667 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 ) 2025-09-08T14:17:21,667 ^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T14:17:21,667 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T14:17:21,667 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T14:17:21,667 if not criterion.candidates: 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T14:17:21,667 return bool(self._sequence) 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T14:17:21,667 self._bool = any(self) 2025-09-08T14:17:21,667 ~~~^^^^^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T14:17:21,667 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T14:17:21,667 ^^^^^^^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T14:17:21,667 candidate = func() 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T14:17:21,667 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:21,667 link, template, name, version 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 ) 2025-09-08T14:17:21,667 ^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T14:17:21,667 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~^ 2025-09-08T14:17:21,667 link, 2025-09-08T14:17:21,667 ^^^^^ 2025-09-08T14:17:21,667 ...<3 lines>... 2025-09-08T14:17:21,667 version=version, 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 ) 2025-09-08T14:17:21,667 ^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T14:17:21,667 super().__init__( 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:21,667 link=link, 2025-09-08T14:17:21,667 ^^^^^^^^^^ 2025-09-08T14:17:21,667 ...<4 lines>... 2025-09-08T14:17:21,667 version=version, 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 ) 2025-09-08T14:17:21,667 ^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T14:17:21,667 self.dist = self._prepare() 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T14:17:21,667 dist = self._prepare_distribution() 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T14:17:21,667 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T14:17:21,667 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T14:17:21,667 dist = _get_prepared_distribution( 2025-09-08T14:17:21,667 req, 2025-09-08T14:17:21,667 ...<3 lines>... 2025-09-08T14:17:21,667 self.check_build_deps, 2025-09-08T14:17:21,667 ) 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T14:17:21,667 abstract_dist.prepare_distribution_metadata( 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:21,667 finder, build_isolation, check_build_deps 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 ) 2025-09-08T14:17:21,667 ^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T14:17:21,667 self.req.prepare_metadata() 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T14:17:21,667 self.metadata_directory = generate_metadata_legacy( 2025-09-08T14:17:21,667 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:21,667 build_env=self.build_env, 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 ...<3 lines>... 2025-09-08T14:17:21,667 details=details, 2025-09-08T14:17:21,667 ^^^^^^^^^^^^^^^^ 2025-09-08T14:17:21,667 ) 2025-09-08T14:17:21,667 ^ 2025-09-08T14:17:21,667 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T14:17:21,667 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T14:17:21,667 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T14:17:21,687 Removed ssw-aligner==0.0.0 from https://files.pythonhosted.org/packages/26/c5/d6d45f897bcaabc6413b3eba32aceb83da292e4837d172fd478e679326ae/ssw_aligner-0.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-_tixjjvd' 2025-09-08T14:17:21,687 Removed build tracker: '/tmp/pip-build-tracker-_tixjjvd'