2025-09-08T14:17:25,636 Created temporary directory: /tmp/pip-build-tracker-mr4sdg7x 2025-09-08T14:17:25,636 Initialized build tracking at /tmp/pip-build-tracker-mr4sdg7x 2025-09-08T14:17:25,637 Created build tracker: /tmp/pip-build-tracker-mr4sdg7x 2025-09-08T14:17:25,637 Entered build tracker: /tmp/pip-build-tracker-mr4sdg7x 2025-09-08T14:17:25,637 Created temporary directory: /tmp/pip-wheel-ni4959dr 2025-09-08T14:17:25,640 Created temporary directory: /tmp/pip-ephem-wheel-cache-kow7iawk 2025-09-08T14:17:25,699 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T14:17:25,701 2 location(s) to search for versions of ssw-aligner: 2025-09-08T14:17:25,701 * https://pypi.org/simple/ssw-aligner/ 2025-09-08T14:17:25,701 * https://www.piwheels.org/simple/ssw-aligner/ 2025-09-08T14:17:25,701 Fetching project page and analyzing links: https://pypi.org/simple/ssw-aligner/ 2025-09-08T14:17:25,702 Getting page https://pypi.org/simple/ssw-aligner/ 2025-09-08T14:17:25,703 Found index url https://pypi.org/simple/ 2025-09-08T14:17:25,773 Fetched page https://pypi.org/simple/ssw-aligner/ as application/vnd.pypi.simple.v1+json 2025-09-08T14:17:25,775 Found link https://files.pythonhosted.org/packages/26/c5/d6d45f897bcaabc6413b3eba32aceb83da292e4837d172fd478e679326ae/ssw_aligner-0.0.0.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.0 2025-09-08T14:17:25,775 Found link https://files.pythonhosted.org/packages/db/90/df5f1864262c4dfdca23700b93fd6f12e7525d050c2e3a059f756ce3cb5c/ssw_aligner-0.0.1.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.1 2025-09-08T14:17:25,775 Found link https://files.pythonhosted.org/packages/00/40/c2aee762db470efb345706da1fdafcba22fa9458f702f5867cbc2a2202f4/ssw_aligner-0.0.2.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.2 2025-09-08T14:17:25,776 Found link https://files.pythonhosted.org/packages/07/28/37a2fbf4b0bc91cc3d441524aec94dc8bb7a4f62fea679a6c25dbd3235c5/ssw_aligner-0.0.3.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.3 2025-09-08T14:17:25,776 Found link https://files.pythonhosted.org/packages/5c/c9/1b596cea0939fcde6549b0be70518b7bad3d23335006c5641438b3605813/ssw_aligner-0.0.4.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.4 2025-09-08T14:17:25,776 Found link https://files.pythonhosted.org/packages/96/3b/1fda982e7c2264d8164fd3cacd82a1a00de575a1eff68b3f86c578af2a7b/ssw_aligner-0.0.5.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.5 2025-09-08T14:17:25,776 Found link https://files.pythonhosted.org/packages/fe/60/131861d0d4250f27a65db140a09f8a208e5db084135ddbe7c7c580b45add/ssw_aligner-0.0.6.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.6 2025-09-08T14:17:25,776 Found link https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.7 2025-09-08T14:17:25,777 Found link https://files.pythonhosted.org/packages/77/9a/73d8f071e78956c30e012c3fc5f9735a0e28426dad0cb6fd534e26cdd7db/ssw_aligner-0.0.8.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.8 2025-09-08T14:17:25,777 Fetching project page and analyzing links: https://www.piwheels.org/simple/ssw-aligner/ 2025-09-08T14:17:25,777 Getting page https://www.piwheels.org/simple/ssw-aligner/ 2025-09-08T14:17:25,778 Found index url https://www.piwheels.org/simple/ 2025-09-08T14:17:25,868 Fetched page https://www.piwheels.org/simple/ssw-aligner/ as text/html 2025-09-08T14:17:25,869 Skipping link: not a file: https://www.piwheels.org/simple/ssw-aligner/ 2025-09-08T14:17:25,869 Skipping link: not a file: https://pypi.org/simple/ssw-aligner/ 2025-09-08T14:17:25,895 Given no hashes to check 1 links for project 'ssw-aligner': discarding no candidates 2025-09-08T14:17:25,896 Collecting ssw-aligner==0.0.3 2025-09-08T14:17:25,898 Created temporary directory: /tmp/pip-unpack-8a5o5imv 2025-09-08T14:17:26,036 Downloading ssw_aligner-0.0.3.tar.gz (103 kB) 2025-09-08T14:17:26,091 Added ssw-aligner==0.0.3 from https://files.pythonhosted.org/packages/07/28/37a2fbf4b0bc91cc3d441524aec94dc8bb7a4f62fea679a6c25dbd3235c5/ssw_aligner-0.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-mr4sdg7x' 2025-09-08T14:17:26,092 Running setup.py (path:/tmp/pip-wheel-ni4959dr/ssw-aligner_1edbd1cff11d487099ee47a85ab6443e/setup.py) egg_info for package ssw-aligner 2025-09-08T14:17:26,092 Created temporary directory: /tmp/pip-pip-egg-info-eta8ksjq 2025-09-08T14:17:26,093 Preparing metadata (setup.py): started 2025-09-08T14:17:26,093 Running command python setup.py egg_info 2025-09-08T14:17:26,610 Traceback (most recent call last): 2025-09-08T14:17:26,611 File "", line 2, in 2025-09-08T14:17:26,611 exec(compile(''' 2025-09-08T14:17:26,611 ~~~~^^^^^^^^^^^^ 2025-09-08T14:17:26,611 # This is -- a caller that pip uses to run setup.py 2025-09-08T14:17:26,611 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,612 ...<32 lines>... 2025-09-08T14:17:26,612 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T14:17:26,612 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,612 ''' % ('/tmp/pip-wheel-ni4959dr/ssw-aligner_1edbd1cff11d487099ee47a85ab6443e/setup.py',), "", "exec")) 2025-09-08T14:17:26,612 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,612 File "", line 35, in 2025-09-08T14:17:26,612 File "/tmp/pip-wheel-ni4959dr/ssw-aligner_1edbd1cff11d487099ee47a85ab6443e/setup.py", line 18 2025-09-08T14:17:26,612 print np.get_include() 2025-09-08T14:17:26,613 ^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,613 SyntaxError: Missing parentheses in call to 'print'. Did you mean print(...)? 2025-09-08T14:17:26,696 ERROR: python setup.py egg_info exited with 1 2025-09-08T14:17:26,708 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T14:17:26,708 exec(compile('"'"''"'"''"'"' 2025-09-08T14:17:26,708 # This is -- a caller that pip uses to run setup.py 2025-09-08T14:17:26,708 # 2025-09-08T14:17:26,708 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T14:17:26,708 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T14:17:26,708 # - It provides a clear error message when setuptools is not installed. 2025-09-08T14:17:26,708 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T14:17:26,708 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T14:17:26,708 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T14:17:26,708 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T14:17:26,708 import os, sys, tokenize, traceback 2025-09-08T14:17:26,708 2025-09-08T14:17:26,708 try: 2025-09-08T14:17:26,708 import setuptools 2025-09-08T14:17:26,708 except ImportError: 2025-09-08T14:17:26,708 print( 2025-09-08T14:17:26,708 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T14:17:26,708 "the build environment with exception:", 2025-09-08T14:17:26,708 file=sys.stderr, 2025-09-08T14:17:26,708 ) 2025-09-08T14:17:26,708 traceback.print_exc() 2025-09-08T14:17:26,708 sys.exit(1) 2025-09-08T14:17:26,708 2025-09-08T14:17:26,708 __file__ = %r 2025-09-08T14:17:26,708 sys.argv[0] = __file__ 2025-09-08T14:17:26,708 2025-09-08T14:17:26,708 if os.path.exists(__file__): 2025-09-08T14:17:26,708 filename = __file__ 2025-09-08T14:17:26,708 with tokenize.open(__file__) as f: 2025-09-08T14:17:26,708 setup_py_code = f.read() 2025-09-08T14:17:26,708 else: 2025-09-08T14:17:26,708 filename = "" 2025-09-08T14:17:26,708 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T14:17:26,708 2025-09-08T14:17:26,708 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T14:17:26,708 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-ni4959dr/ssw-aligner_1edbd1cff11d487099ee47a85ab6443e/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-eta8ksjq[/] 2025-09-08T14:17:26,708 [bold magenta]cwd[/]: /tmp/pip-wheel-ni4959dr/ssw-aligner_1edbd1cff11d487099ee47a85ab6443e/ 2025-09-08T14:17:26,708 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T14:17:26,709 ERROR: metadata generation failed 2025-09-08T14:17:26,714 Exception information: 2025-09-08T14:17:26,714 Traceback (most recent call last): 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T14:17:26,714 call_subprocess( 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~^ 2025-09-08T14:17:26,714 args, 2025-09-08T14:17:26,714 ^^^^^ 2025-09-08T14:17:26,714 ...<2 lines>... 2025-09-08T14:17:26,714 spinner=spinner, 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 ) 2025-09-08T14:17:26,714 ^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T14:17:26,714 raise error 2025-09-08T14:17:26,714 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T14:17:26,714 2025-09-08T14:17:26,714 The above exception was the direct cause of the following exception: 2025-09-08T14:17:26,714 2025-09-08T14:17:26,714 Traceback (most recent call last): 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T14:17:26,714 status = _inner_run() 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T14:17:26,714 return self.run(options, args) 2025-09-08T14:17:26,714 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T14:17:26,714 return func(self, options, args) 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T14:17:26,714 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T14:17:26,714 result = self._result = resolver.resolve( 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:26,714 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 ) 2025-09-08T14:17:26,714 ^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T14:17:26,714 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T14:17:26,714 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T14:17:26,714 if not criterion.candidates: 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T14:17:26,714 return bool(self._sequence) 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T14:17:26,714 self._bool = any(self) 2025-09-08T14:17:26,714 ~~~^^^^^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T14:17:26,714 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T14:17:26,714 ^^^^^^^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T14:17:26,714 candidate = func() 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T14:17:26,714 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:26,714 link, template, name, version 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 ) 2025-09-08T14:17:26,714 ^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T14:17:26,714 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~^ 2025-09-08T14:17:26,714 link, 2025-09-08T14:17:26,714 ^^^^^ 2025-09-08T14:17:26,714 ...<3 lines>... 2025-09-08T14:17:26,714 version=version, 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 ) 2025-09-08T14:17:26,714 ^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T14:17:26,714 super().__init__( 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:26,714 link=link, 2025-09-08T14:17:26,714 ^^^^^^^^^^ 2025-09-08T14:17:26,714 ...<4 lines>... 2025-09-08T14:17:26,714 version=version, 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 ) 2025-09-08T14:17:26,714 ^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T14:17:26,714 self.dist = self._prepare() 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T14:17:26,714 dist = self._prepare_distribution() 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T14:17:26,714 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T14:17:26,714 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T14:17:26,714 dist = _get_prepared_distribution( 2025-09-08T14:17:26,714 req, 2025-09-08T14:17:26,714 ...<3 lines>... 2025-09-08T14:17:26,714 self.check_build_deps, 2025-09-08T14:17:26,714 ) 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T14:17:26,714 abstract_dist.prepare_distribution_metadata( 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:26,714 finder, build_isolation, check_build_deps 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 ) 2025-09-08T14:17:26,714 ^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T14:17:26,714 self.req.prepare_metadata() 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T14:17:26,714 self.metadata_directory = generate_metadata_legacy( 2025-09-08T14:17:26,714 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T14:17:26,714 build_env=self.build_env, 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 ...<3 lines>... 2025-09-08T14:17:26,714 details=details, 2025-09-08T14:17:26,714 ^^^^^^^^^^^^^^^^ 2025-09-08T14:17:26,714 ) 2025-09-08T14:17:26,714 ^ 2025-09-08T14:17:26,714 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T14:17:26,714 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T14:17:26,714 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T14:17:26,738 Removed ssw-aligner==0.0.3 from https://files.pythonhosted.org/packages/07/28/37a2fbf4b0bc91cc3d441524aec94dc8bb7a4f62fea679a6c25dbd3235c5/ssw_aligner-0.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-mr4sdg7x' 2025-09-08T14:17:26,738 Removed build tracker: '/tmp/pip-build-tracker-mr4sdg7x'