2025-09-08T16:18:00,539 Created temporary directory: /tmp/pip-build-tracker-7jqbbm4l 2025-09-08T16:18:00,540 Initialized build tracking at /tmp/pip-build-tracker-7jqbbm4l 2025-09-08T16:18:00,540 Created build tracker: /tmp/pip-build-tracker-7jqbbm4l 2025-09-08T16:18:00,540 Entered build tracker: /tmp/pip-build-tracker-7jqbbm4l 2025-09-08T16:18:00,540 Created temporary directory: /tmp/pip-wheel-m1cyhfsy 2025-09-08T16:18:00,543 Created temporary directory: /tmp/pip-ephem-wheel-cache-958h9igw 2025-09-08T16:18:00,600 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T16:18:00,602 2 location(s) to search for versions of quantiphyse: 2025-09-08T16:18:00,602 * https://pypi.org/simple/quantiphyse/ 2025-09-08T16:18:00,602 * https://www.piwheels.org/simple/quantiphyse/ 2025-09-08T16:18:00,603 Fetching project page and analyzing links: https://pypi.org/simple/quantiphyse/ 2025-09-08T16:18:00,603 Getting page https://pypi.org/simple/quantiphyse/ 2025-09-08T16:18:00,604 Found index url https://pypi.org/simple/ 2025-09-08T16:18:00,674 Fetched page https://pypi.org/simple/quantiphyse/ as application/vnd.pypi.simple.v1+json 2025-09-08T16:18:00,678 Found link https://files.pythonhosted.org/packages/28/a0/59544760252150f881e99355db9350f780121f8a5bce54d4aadd0750a37c/quantiphyse-0.7.6.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.6 2025-09-08T16:18:00,679 Found link https://files.pythonhosted.org/packages/2d/46/3944f9d2f6520fdee2edf466b75c590a663f1302ecfb35341f81facf39ef/quantiphyse-0.7.6.post15.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.6.post15 2025-09-08T16:18:00,679 Found link https://files.pythonhosted.org/packages/f5/ef/e7ab34f36c6ae6e1778d25950fde139f784793939f3e822232bfa347a57e/quantiphyse-0.7.6.post20.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.6.post20 2025-09-08T16:18:00,679 Skipping link: No binaries permitted for quantiphyse: https://files.pythonhosted.org/packages/07/93/392ed46f2ee981489dd4ce553c57431c29528fc49b80066091d968e60522/quantiphyse-0.7.7-cp27-cp27m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/quantiphyse/) 2025-09-08T16:18:00,679 Skipping link: No binaries permitted for quantiphyse: https://files.pythonhosted.org/packages/8b/a7/56204df5f56d5bf4559b70e61c6ec96fa97a9dd34b54a0f242949cb26e7d/quantiphyse-0.7.7-cp27-cp27m-win_amd64.whl (from https://pypi.org/simple/quantiphyse/) 2025-09-08T16:18:00,679 Skipping link: No binaries permitted for quantiphyse: https://files.pythonhosted.org/packages/1b/78/0e942d68af6bdc94a714aa2c5368fb3cf6f5bf7e2c0d9f786efff2a5e01f/quantiphyse-0.7.7-cp34-cp34m-macosx_10_6_x86_64.whl (from https://pypi.org/simple/quantiphyse/) 2025-09-08T16:18:00,680 Found link https://files.pythonhosted.org/packages/a1/a7/53e97afab67628f860f014a6f0a06cb95237d8b99899f980953a85e9263d/quantiphyse-0.7.7.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.7 2025-09-08T16:18:00,680 Found link https://files.pythonhosted.org/packages/5b/a0/5f676942f422dd20c42447ba0a367177631c5a7003ca3fc3d6e97e6decc4/quantiphyse-0.7.7.post5.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.7.post5 2025-09-08T16:18:00,680 Found link https://files.pythonhosted.org/packages/ad/ba/6fd21170a8eb47fca0facbf3b6295ab7137a8676eee24da210342d721654/quantiphyse-0.7.7.post26.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.7.post26 2025-09-08T16:18:00,680 Found link https://files.pythonhosted.org/packages/af/62/cb86ae2a46f74905b08c3be53fee4734be2a8e04e1cbebaaaa452ffbd5c4/quantiphyse-0.7.7.post27.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.7.post27 2025-09-08T16:18:00,680 Found link https://files.pythonhosted.org/packages/0b/7d/be8099398da42f9f118f984873e189f8bf656543872114ae6257043471fe/quantiphyse-0.7.8.post2.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.8.post2 2025-09-08T16:18:00,681 Found link https://files.pythonhosted.org/packages/f7/68/1cf4eb4c4ec88358cbde26ff20d3f8b1dfa14ad86a51929bcd7987a976bb/quantiphyse-0.7.9.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.9 2025-09-08T16:18:00,681 Found link https://files.pythonhosted.org/packages/94/a0/563be0348626c5d5282c2659ec474be661fca8f8ee56eed8cac72dd3f2d0/quantiphyse-0.7.9.post3.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.9.post3 2025-09-08T16:18:00,681 Found link https://files.pythonhosted.org/packages/d1/aa/3b8b9b29068f813788432aa94b1dd429ddcfb408801b547abdd1313ebbba/quantiphyse-0.7.10.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.10 2025-09-08T16:18:00,681 Found link https://files.pythonhosted.org/packages/b7/5a/76cfda35951d452b757eff0997ed2efdc478d6e1ea3960c80e2ff7d42005/quantiphyse-0.7.10.post12.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.7.10.post12 2025-09-08T16:18:00,682 Found link https://files.pythonhosted.org/packages/22/28/8bb80097b50ac15adc1bac2e9a6890a6df60f9e293750bb9bcedb0340b92/quantiphyse-0.9.3.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.3 2025-09-08T16:18:00,682 Found link https://files.pythonhosted.org/packages/39/03/29bb7e794ed47bd7b79c3f0034b176b13d931c7d1afbc468a5e46aefb4bf/quantiphyse-0.9.3.post2.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.3.post2 2025-09-08T16:18:00,682 Found link https://files.pythonhosted.org/packages/a6/da/433f4b82cee290f2e64067113f0429a4bc4ad0aa26db46ea2e64751ca4b5/quantiphyse-0.9.3.post24.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.3.post24 2025-09-08T16:18:00,682 Found link https://files.pythonhosted.org/packages/7b/8e/83b5bdbf71a0e8f6e9113fca4761cda90fe62f02bcdeb3ca35d5d1d3a43f/quantiphyse-0.9.3.post39.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.3.post39 2025-09-08T16:18:00,682 Found link https://files.pythonhosted.org/packages/c3/f6/f91f80f98787794905c430f348d610ee9a46e4b6719f7ab1b6e0d6b63945/quantiphyse-0.9.4.post5.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.4.post5 2025-09-08T16:18:00,683 Found link https://files.pythonhosted.org/packages/13/48/7214c4fc0ddf5fee23450e0ad08fc07b2b6ea49d03f033425108aa315785/quantiphyse-0.9.5.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.5 2025-09-08T16:18:00,683 Found link https://files.pythonhosted.org/packages/55/df/73ed4fcb7e7cb7951dd492972e7e25640e529de5cd805128d36c6c8ce28d/quantiphyse-0.9.5.post13.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.5.post13 2025-09-08T16:18:00,683 Found link https://files.pythonhosted.org/packages/91/7c/69634dc0dfc4a31ed040389b6a853dc21a294928b7390bb52fe47273e699/quantiphyse-0.9.5.post24.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.5.post24 2025-09-08T16:18:00,683 Found link https://files.pythonhosted.org/packages/30/56/668efd11021062481058399a2f6e70969faf529ae7b70c4ee1783e41cf4c/quantiphyse-0.9.6.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.6 2025-09-08T16:18:00,684 Found link https://files.pythonhosted.org/packages/01/76/feed4791b8e62fcd52cd1e1326983dbe874d4c91bc5aa54482f180ad9f56/quantiphyse-0.9.7.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.7 2025-09-08T16:18:00,684 Found link https://files.pythonhosted.org/packages/70/48/bc040f91d784710832218ec89bfd10cb017296d1218ddb62250daa5b4a4a/quantiphyse-0.9.7.post6.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.7.post6 2025-09-08T16:18:00,684 Found link https://files.pythonhosted.org/packages/3b/e3/f72a1a4919752bf6d19d35c2c5792b8eaffc39a9e464706077db53a6985c/quantiphyse-0.9.8.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.8 2025-09-08T16:18:00,684 Found link https://files.pythonhosted.org/packages/1d/ac/6c3f92916a0c29e93e59add218f05fb912986a07a43855ddb55601c248c6/quantiphyse-0.9.8.post1.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.8.post1 2025-09-08T16:18:00,684 Found link https://files.pythonhosted.org/packages/8c/0d/04bc86b827c22620c072bc826eb6b6d5206421e25a134361c9d3ed175433/quantiphyse-0.9.9.post1.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.9.post1 2025-09-08T16:18:00,685 Found link https://files.pythonhosted.org/packages/3b/d2/48b39e26395341bcf70a1263b52bcb1976c63f3705f9aa9894c507051f07/quantiphyse-0.9.9.post2.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.9.post2 2025-09-08T16:18:00,685 Found link https://files.pythonhosted.org/packages/9f/59/a499dfb8afaccb91c1b6fd4eb84ef6c85f472a04498f0962becfa9362177/quantiphyse-0.9.9.post6.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.9.post6 2025-09-08T16:18:00,685 Found link https://files.pythonhosted.org/packages/d8/2c/98631248f6d7048b7e0775e9d9cee34cd6b072c9c07bec300015f6dd5497/quantiphyse-0.9.10.tar.gz (from https://pypi.org/simple/quantiphyse/), version: 0.9.10 2025-09-08T16:18:00,686 Fetching project page and analyzing links: https://www.piwheels.org/simple/quantiphyse/ 2025-09-08T16:18:00,686 Getting page https://www.piwheels.org/simple/quantiphyse/ 2025-09-08T16:18:00,687 Found index url https://www.piwheels.org/simple/ 2025-09-08T16:18:00,779 Fetched page https://www.piwheels.org/simple/quantiphyse/ as text/html 2025-09-08T16:18:00,785 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.10-py3-none-any.whl#sha256=c25f312c26731dcaf462263914f8360fa05085ec5bc19ff69dd969065817b717 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,785 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.9.post6-py3-none-any.whl#sha256=747b5dfb5f3aacfa2f64e287e8b71928beea6434a821c3b809b1d70124715ec1 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,785 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.9.post2-py3-none-any.whl#sha256=b1f6a19ef05aac0b78b5a4cbb1ddd8e34e87366ea144686bd42ea9fa34e736c1 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,785 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.9.post1-py3-none-any.whl#sha256=0801bc2aa6b7b8fedfd2f275b5a29201df0b3f9c0c07d8a03efd0f7b685305b1 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,786 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.8.post1-py3-none-any.whl#sha256=e8646db4c2c821e1acf17901a57a9220f1f3866ac25b7ca09e73976615cb0678 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,786 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.8-py3-none-any.whl#sha256=fcd6ed32308a8dad74681ecb761a7ce987ef15a6165eaa532aa32a902520c63a (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,786 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.7.post6-py3-none-any.whl#sha256=da2c753a1ee8713f2e65c8e3eedc238fef9afed025beb84ae27fca4d60f6b764 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,786 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.7-py3-none-any.whl#sha256=7213d3158ef70b2af4965810947f4e4c1cbdd5ab78216aeeb79dc8f04cc7e76d (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,786 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.6-py3-none-any.whl#sha256=a89bf84d77112287b4a8ff424241418a0d0d3f1a02f945586b75301838980917 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,786 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.5.post24-py3-none-any.whl#sha256=5d30f5b96ca8642eb07b57532202a075cd5608b24a41b820f649ce3e202b171e (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,787 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.5.post13-py3-none-any.whl#sha256=30d5e8aa823139faa1ba186088f5f896b56b066fa867a2fddfd20a18d0c2d235 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,787 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.5-py3-none-any.whl#sha256=85b2fa8fafc8460f14ba21a5b3933fcbc158ebcd83a22d54751769bfe5a31dcf (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,787 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.4.post5-py3-none-any.whl#sha256=e7639b2c4f62733eebe8fb8fae760cf0bfb3cec379331afd4d7886d4f2da78ab (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,787 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.3.post39-py3-none-any.whl#sha256=5d8a3433660cfa9c02ea0e146e393f3fdcce6d2c086edf8212d9392951145fa5 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,787 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.3.post24-py3-none-any.whl#sha256=977f950b027ba67b7f0041e70c7095a3025369dfc94ffd659be910d344498f5c (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,787 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.3.post2-py3-none-any.whl#sha256=b91dcc4ee647903ac9ede0bb0a0f0923e0e25646facf65cf02d2a5bfceab6d02 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,788 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.9.3-py3-none-any.whl#sha256=9bd7f1cd9430ccb667fdb244300a4415ef686349cf6e153ff6b2d220bbeb439e (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,788 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.7.10.post12-py3-none-any.whl#sha256=68de9091c195b93c6328f596c32a4a5f991c19ba6c9f231b529f8e674b246450 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,788 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.7.10-py3-none-any.whl#sha256=41bf71eccd32041ef54b33f964b0dd18057f4ad5d90c6b79d3d8ce4ad4c26707 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,788 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.7.9.post3-py3-none-any.whl#sha256=008a5578a7ba32ea577ac47634c02b0b2d81374b7a388496055df0fd7ebbcfbf (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,788 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.7.9-py3-none-any.whl#sha256=c1ee32e88e344f371f33a781140e21390ca44c1d8e0d563f80da31e2f9a258c4 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,788 Skipping link: No binaries permitted for quantiphyse: https://archive1.piwheels.org/simple/quantiphyse/quantiphyse-0.7.8.post2-py3-none-any.whl#sha256=333de3ed7d78603d1a75fc2cdc555ae9c999581bcac22a0221d8cc9f8da74a60 (from https://www.piwheels.org/simple/quantiphyse/) 2025-09-08T16:18:00,789 Skipping link: not a file: https://www.piwheels.org/simple/quantiphyse/ 2025-09-08T16:18:00,789 Skipping link: not a file: https://pypi.org/simple/quantiphyse/ 2025-09-08T16:18:00,818 Given no hashes to check 1 links for project 'quantiphyse': discarding no candidates 2025-09-08T16:18:00,819 Collecting quantiphyse==0.7.7 2025-09-08T16:18:00,821 Created temporary directory: /tmp/pip-unpack-cnsit4mh 2025-09-08T16:18:00,969 Downloading quantiphyse-0.7.7.tar.gz (1.5 MB) 2025-09-08T16:18:01,420 Added quantiphyse==0.7.7 from https://files.pythonhosted.org/packages/a1/a7/53e97afab67628f860f014a6f0a06cb95237d8b99899f980953a85e9263d/quantiphyse-0.7.7.tar.gz to build tracker '/tmp/pip-build-tracker-7jqbbm4l' 2025-09-08T16:18:01,421 Running setup.py (path:/tmp/pip-wheel-m1cyhfsy/quantiphyse_e80bf25e6cf0485fad12913a6a8e3153/setup.py) egg_info for package quantiphyse 2025-09-08T16:18:01,422 Created temporary directory: /tmp/pip-pip-egg-info-n4mepw8a 2025-09-08T16:18:01,422 Preparing metadata (setup.py): started 2025-09-08T16:18:01,423 Running command python setup.py egg_info 2025-09-08T16:18:02,358 fatal: not a git repository (or any parent up to mount point /) 2025-09-08T16:18:02,358 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-08T16:18:02,366 fatal: not a git repository (or any parent up to mount point /) 2025-09-08T16:18:02,366 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-08T16:18:07,028 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:127:29: Use boundscheck(False) for faster access 2025-09-08T16:18:07,028 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:128:29: Use boundscheck(False) for faster access 2025-09-08T16:18:07,029 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:129:29: Use boundscheck(False) for faster access 2025-09-08T16:18:07,032 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:149:35: Use boundscheck(False) for faster access 2025-09-08T16:18:07,033 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:150:48: Use boundscheck(False) for faster access 2025-09-08T16:18:07,034 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:160:55: Use boundscheck(False) for faster access 2025-09-08T16:18:07,035 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:161:58: Use boundscheck(False) for faster access 2025-09-08T16:18:07,036 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:164:74: Use boundscheck(False) for faster access 2025-09-08T16:18:07,037 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:173:39: Use boundscheck(False) for faster access 2025-09-08T16:18:07,037 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:174:48: Use boundscheck(False) for faster access 2025-09-08T16:18:07,038 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:175:40: Use boundscheck(False) for faster access 2025-09-08T16:18:07,040 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:192:31: Use boundscheck(False) for faster access 2025-09-08T16:18:07,040 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:195:43: Use boundscheck(False) for faster access 2025-09-08T16:18:07,041 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:198:44: Use boundscheck(False) for faster access 2025-09-08T16:18:07,041 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:200:39: Use boundscheck(False) for faster access 2025-09-08T16:18:07,042 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:201:32: Use boundscheck(False) for faster access 2025-09-08T16:18:07,042 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:202:32: Use boundscheck(False) for faster access 2025-09-08T16:18:07,042 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:203:32: Use boundscheck(False) for faster access 2025-09-08T16:18:07,043 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:205:55: Use boundscheck(False) for faster access 2025-09-08T16:18:07,044 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:205:36: Use boundscheck(False) for faster access 2025-09-08T16:18:07,045 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:210:53: Use boundscheck(False) for faster access 2025-09-08T16:18:07,045 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:210:28: Use boundscheck(False) for faster access 2025-09-08T16:18:07,046 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:218:35: Use boundscheck(False) for faster access 2025-09-08T16:18:07,047 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:221:47: Use boundscheck(False) for faster access 2025-09-08T16:18:07,047 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:224:48: Use boundscheck(False) for faster access 2025-09-08T16:18:07,048 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:228:56: Use boundscheck(False) for faster access 2025-09-08T16:18:07,048 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:229:55: Use boundscheck(False) for faster access 2025-09-08T16:18:07,049 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:233:45: Use boundscheck(False) for faster access 2025-09-08T16:18:07,050 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:234:46: Use boundscheck(False) for faster access 2025-09-08T16:18:07,061 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:295:27: Use boundscheck(False) for faster access 2025-09-08T16:18:07,062 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:298:41: Use boundscheck(False) for faster access 2025-09-08T16:18:07,063 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:303:36: Use boundscheck(False) for faster access 2025-09-08T16:18:07,063 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:305:38: Use boundscheck(False) for faster access 2025-09-08T16:18:07,064 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:308:30: Use boundscheck(False) for faster access 2025-09-08T16:18:07,064 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:309:30: Use boundscheck(False) for faster access 2025-09-08T16:18:07,065 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:310:30: Use boundscheck(False) for faster access 2025-09-08T16:18:07,065 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:317:43: Use boundscheck(False) for faster access 2025-09-08T16:18:07,066 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:317:65: Use boundscheck(False) for faster access 2025-09-08T16:18:07,066 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:318:43: Use boundscheck(False) for faster access 2025-09-08T16:18:07,066 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:318:65: Use boundscheck(False) for faster access 2025-09-08T16:18:07,067 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:319:43: Use boundscheck(False) for faster access 2025-09-08T16:18:07,067 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:319:65: Use boundscheck(False) for faster access 2025-09-08T16:18:07,068 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:326:44: Use boundscheck(False) for faster access 2025-09-08T16:18:07,069 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:327:58: Use boundscheck(False) for faster access 2025-09-08T16:18:07,070 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:328:54: Use boundscheck(False) for faster access 2025-09-08T16:18:07,070 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:330:46: Use boundscheck(False) for faster access 2025-09-08T16:18:07,070 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:331:46: Use boundscheck(False) for faster access 2025-09-08T16:18:07,071 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:332:46: Use boundscheck(False) for faster access 2025-09-08T16:18:07,072 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:336:56: Use boundscheck(False) for faster access 2025-09-08T16:18:07,073 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:337:56: Use boundscheck(False) for faster access 2025-09-08T16:18:07,073 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:338:65: Use boundscheck(False) for faster access 2025-09-08T16:18:07,074 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:344:57: Use boundscheck(False) for faster access 2025-09-08T16:18:07,075 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:345:57: Use boundscheck(False) for faster access 2025-09-08T16:18:07,075 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:346:57: Use boundscheck(False) for faster access 2025-09-08T16:18:07,075 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx:344:46: Use boundscheck(False) for faster access 2025-09-08T16:18:10,199 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:27:65: Index should be typed for more efficient access 2025-09-08T16:18:10,199 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:27:69: Index should be typed for more efficient access 2025-09-08T16:18:10,199 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:27:73: Index should be typed for more efficient access 2025-09-08T16:18:10,199 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:27:31: Index should be typed for more efficient access 2025-09-08T16:18:10,199 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:27:35: Index should be typed for more efficient access 2025-09-08T16:18:10,199 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:27:39: Index should be typed for more efficient access 2025-09-08T16:18:10,203 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:48:28: Index should be typed for more efficient access 2025-09-08T16:18:10,203 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:48:32: Index should be typed for more efficient access 2025-09-08T16:18:10,203 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:48:36: Index should be typed for more efficient access 2025-09-08T16:18:10,206 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:62:28: Index should be typed for more efficient access 2025-09-08T16:18:10,206 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:62:32: Index should be typed for more efficient access 2025-09-08T16:18:10,206 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:62:36: Index should be typed for more efficient access 2025-09-08T16:18:10,208 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:68:54: Index should be typed for more efficient access 2025-09-08T16:18:10,208 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:68:58: Index should be typed for more efficient access 2025-09-08T16:18:10,208 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:68:62: Index should be typed for more efficient access 2025-09-08T16:18:10,208 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:68:66: Index should be typed for more efficient access 2025-09-08T16:18:10,208 performance hint: quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx:68:39: Index should be typed for more efficient access 2025-09-08T16:18:13,130 Compiling quantiphyse/packages/core/t1/t1_model.pyx because it changed. 2025-09-08T16:18:13,130 Compiling quantiphyse/packages/core/supervoxels/perfusionslic/additional/bspline_smoothing.pyx because it changed. 2025-09-08T16:18:13,130 Compiling quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx because it changed. 2025-09-08T16:18:13,130 Compiling quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx because it changed. 2025-09-08T16:18:13,131 Compiling quantiphyse/packages/core/supervoxels/perfusionslic/additional/processing.pyx because it changed. 2025-09-08T16:18:13,131 [1/5] Cythonizing quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx 2025-09-08T16:18:13,131 [2/5] Cythonizing quantiphyse/packages/core/supervoxels/perfusionslic/additional/bspline_smoothing.pyx 2025-09-08T16:18:13,131 [3/5] Cythonizing quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx 2025-09-08T16:18:13,131 [4/5] Cythonizing quantiphyse/packages/core/supervoxels/perfusionslic/additional/processing.pyx 2025-09-08T16:18:13,131 [5/5] Cythonizing quantiphyse/packages/core/t1/t1_model.pyx 2025-09-08T16:18:13,309 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T16:18:13,309 !! 2025-09-08T16:18:13,309 ******************************************************************************** 2025-09-08T16:18:13,309 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T16:18:13,309 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T16:18:13,310 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T16:18:13,310 or your builds will no longer be supported. 2025-09-08T16:18:13,310 ******************************************************************************** 2025-09-08T16:18:13,310 !! 2025-09-08T16:18:13,310 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T16:18:13,533 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T16:18:13,533 !! 2025-09-08T16:18:13,533 ******************************************************************************** 2025-09-08T16:18:13,533 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T16:18:13,533 License :: Free for non-commercial use 2025-09-08T16:18:13,533 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T16:18:13,533 ******************************************************************************** 2025-09-08T16:18:13,534 !! 2025-09-08T16:18:13,534 self._finalize_license_expression() 2025-09-08T16:18:13,600 running egg_info 2025-09-08T16:18:13,668 creating /tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info 2025-09-08T16:18:13,669 writing /tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info/PKG-INFO 2025-09-08T16:18:13,670 writing dependency_links to /tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info/dependency_links.txt 2025-09-08T16:18:13,671 writing entry points to /tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info/entry_points.txt 2025-09-08T16:18:13,671 writing requirements to /tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info/requires.txt 2025-09-08T16:18:13,672 writing top-level names to /tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info/top_level.txt 2025-09-08T16:18:13,672 writing manifest file '/tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info/SOURCES.txt' 2025-09-08T16:18:13,896 reading manifest file '/tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info/SOURCES.txt' 2025-09-08T16:18:13,896 reading manifest template 'MANIFEST.in' 2025-09-08T16:18:13,959 warning: no files found matching '*.cc' under directory 'quantiphyse' 2025-09-08T16:18:14,000 adding license file 'LICENSE' 2025-09-08T16:18:14,009 writing manifest file '/tmp/pip-pip-egg-info-n4mepw8a/quantiphyse.egg-info/SOURCES.txt' 2025-09-08T16:18:14,961 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T16:18:14,966 Source in /tmp/pip-wheel-m1cyhfsy/quantiphyse_e80bf25e6cf0485fad12913a6a8e3153 has version 0.7.7, which satisfies requirement quantiphyse==0.7.7 from https://files.pythonhosted.org/packages/a1/a7/53e97afab67628f860f014a6f0a06cb95237d8b99899f980953a85e9263d/quantiphyse-0.7.7.tar.gz 2025-09-08T16:18:14,966 Removed quantiphyse==0.7.7 from https://files.pythonhosted.org/packages/a1/a7/53e97afab67628f860f014a6f0a06cb95237d8b99899f980953a85e9263d/quantiphyse-0.7.7.tar.gz from build tracker '/tmp/pip-build-tracker-7jqbbm4l' 2025-09-08T16:18:14,972 Created temporary directory: /tmp/pip-unpack-9zb1t83h 2025-09-08T16:18:14,973 Created temporary directory: /tmp/pip-unpack-kuwa8wr8 2025-09-08T16:18:14,973 Building wheels for collected packages: quantiphyse 2025-09-08T16:18:14,974 Created temporary directory: /tmp/pip-wheel-gr55z0e3 2025-09-08T16:18:14,975 DEPRECATION: Building 'quantiphyse' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'quantiphyse'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T16:18:14,976 Building wheel for quantiphyse (setup.py): started 2025-09-08T16:18:14,976 Destination directory: /tmp/pip-wheel-gr55z0e3 2025-09-08T16:18:14,976 Running command python setup.py bdist_wheel 2025-09-08T16:18:15,903 fatal: not a git repository (or any parent up to mount point /) 2025-09-08T16:18:15,903 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-08T16:18:15,911 fatal: not a git repository (or any parent up to mount point /) 2025-09-08T16:18:15,911 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-08T16:18:16,659 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T16:18:16,659 !! 2025-09-08T16:18:16,659 ******************************************************************************** 2025-09-08T16:18:16,659 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T16:18:16,659 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T16:18:16,660 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T16:18:16,660 or your builds will no longer be supported. 2025-09-08T16:18:16,660 ******************************************************************************** 2025-09-08T16:18:16,660 !! 2025-09-08T16:18:16,660 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T16:18:16,876 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T16:18:16,876 !! 2025-09-08T16:18:16,876 ******************************************************************************** 2025-09-08T16:18:16,876 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T16:18:16,876 License :: Free for non-commercial use 2025-09-08T16:18:16,877 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T16:18:16,877 ******************************************************************************** 2025-09-08T16:18:16,877 !! 2025-09-08T16:18:16,877 self._finalize_license_expression() 2025-09-08T16:18:16,889 running bdist_wheel 2025-09-08T16:18:17,161 running build 2025-09-08T16:18:17,161 running build_py 2025-09-08T16:18:17,231 creating build/lib.linux-armv7l-cpython-313/quantiphyse 2025-09-08T16:18:17,231 copying quantiphyse/_version.py -> build/lib.linux-armv7l-cpython-313/quantiphyse 2025-09-08T16:18:17,232 copying quantiphyse/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse 2025-09-08T16:18:17,232 copying quantiphyse/qpmain.py -> build/lib.linux-armv7l-cpython-313/quantiphyse 2025-09-08T16:18:17,233 creating build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,234 copying quantiphyse/data/extras.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,234 copying quantiphyse/data/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,235 copying quantiphyse/data/dicoms.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,235 copying quantiphyse/data/qpdata.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,236 copying quantiphyse/data/volume_management.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,237 copying quantiphyse/data/functions.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,238 copying quantiphyse/data/nifti.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,238 copying quantiphyse/data/load_save.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/data 2025-09-08T16:18:17,239 creating build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,239 copying quantiphyse/icons/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,240 creating build/lib.linux-armv7l-cpython-313/quantiphyse/processes 2025-09-08T16:18:17,240 copying quantiphyse/processes/normalisation.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/processes 2025-09-08T16:18:17,241 copying quantiphyse/processes/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/processes 2025-09-08T16:18:17,241 copying quantiphyse/processes/process.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/processes 2025-09-08T16:18:17,242 copying quantiphyse/processes/io.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/processes 2025-09-08T16:18:17,242 copying quantiphyse/processes/feat_pca.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/processes 2025-09-08T16:18:17,243 copying quantiphyse/processes/misc.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/processes 2025-09-08T16:18:17,244 creating build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,244 copying quantiphyse/gui/MainWindow.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,245 copying quantiphyse/gui/data_views.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,245 copying quantiphyse/gui/pickers.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,246 copying quantiphyse/gui/Register.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,247 copying quantiphyse/gui/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,247 copying quantiphyse/gui/OrthoDataView.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,248 copying quantiphyse/gui/HistogramWidget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,248 copying quantiphyse/gui/options.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,249 copying quantiphyse/gui/widgets.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,249 copying quantiphyse/gui/plot.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,250 copying quantiphyse/gui/dialogs.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,250 copying quantiphyse/gui/ViewOptions.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,251 copying quantiphyse/gui/ImageView.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/gui 2025-09-08T16:18:17,252 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages 2025-09-08T16:18:17,252 copying quantiphyse/packages/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages 2025-09-08T16:18:17,253 creating build/lib.linux-armv7l-cpython-313/quantiphyse/test 2025-09-08T16:18:17,253 copying quantiphyse/test/slice_plane_test.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/test 2025-09-08T16:18:17,254 copying quantiphyse/test/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/test 2025-09-08T16:18:17,254 copying quantiphyse/test/ivm_test.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/test 2025-09-08T16:18:17,255 copying quantiphyse/test/process_test.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/test 2025-09-08T16:18:17,255 copying quantiphyse/test/widget_test.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/test 2025-09-08T16:18:17,256 copying quantiphyse/test/qpd_test.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/test 2025-09-08T16:18:17,256 creating build/lib.linux-armv7l-cpython-313/quantiphyse/resources 2025-09-08T16:18:17,257 copying quantiphyse/resources/resource_py3.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/resources 2025-09-08T16:18:17,257 copying quantiphyse/resources/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/resources 2025-09-08T16:18:17,258 copying quantiphyse/resources/resource_py2.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/resources 2025-09-08T16:18:17,259 creating build/lib.linux-armv7l-cpython-313/quantiphyse/utils 2025-09-08T16:18:17,259 copying quantiphyse/utils/batch.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/utils 2025-09-08T16:18:17,259 copying quantiphyse/utils/local.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/utils 2025-09-08T16:18:17,260 copying quantiphyse/utils/exceptions.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/utils 2025-09-08T16:18:17,260 copying quantiphyse/utils/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/utils 2025-09-08T16:18:17,261 copying quantiphyse/utils/cmdline.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/utils 2025-09-08T16:18:17,261 copying quantiphyse/utils/logger.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/utils 2025-09-08T16:18:17,262 copying quantiphyse/utils/plugins.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/utils 2025-09-08T16:18:17,263 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core 2025-09-08T16:18:17,263 copying quantiphyse/packages/core/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core 2025-09-08T16:18:17,264 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/overview 2025-09-08T16:18:17,264 copying quantiphyse/packages/core/overview/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/overview 2025-09-08T16:18:17,265 copying quantiphyse/packages/core/overview/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/overview 2025-09-08T16:18:17,265 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1 2025-09-08T16:18:17,266 copying quantiphyse/packages/core/t1/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1 2025-09-08T16:18:17,266 copying quantiphyse/packages/core/t1/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1 2025-09-08T16:18:17,267 copying quantiphyse/packages/core/t1/process.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1 2025-09-08T16:18:17,267 copying quantiphyse/packages/core/t1/widgets.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1 2025-09-08T16:18:17,268 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/data 2025-09-08T16:18:17,268 copying quantiphyse/packages/core/data/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/data 2025-09-08T16:18:17,269 copying quantiphyse/packages/core/data/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/data 2025-09-08T16:18:17,269 copying quantiphyse/packages/core/data/widgets.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/data 2025-09-08T16:18:17,270 copying quantiphyse/packages/core/data/processes.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/data 2025-09-08T16:18:17,271 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/smoothing 2025-09-08T16:18:17,271 copying quantiphyse/packages/core/smoothing/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/smoothing 2025-09-08T16:18:17,271 copying quantiphyse/packages/core/smoothing/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/smoothing 2025-09-08T16:18:17,272 copying quantiphyse/packages/core/smoothing/process.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/smoothing 2025-09-08T16:18:17,272 copying quantiphyse/packages/core/smoothing/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/smoothing 2025-09-08T16:18:17,273 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/radialprofile 2025-09-08T16:18:17,274 copying quantiphyse/packages/core/radialprofile/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/radialprofile 2025-09-08T16:18:17,274 copying quantiphyse/packages/core/radialprofile/process_tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/radialprofile 2025-09-08T16:18:17,275 copying quantiphyse/packages/core/radialprofile/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/radialprofile 2025-09-08T16:18:17,275 copying quantiphyse/packages/core/radialprofile/process.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/radialprofile 2025-09-08T16:18:17,276 copying quantiphyse/packages/core/radialprofile/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/radialprofile 2025-09-08T16:18:17,276 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/simulation 2025-09-08T16:18:17,277 copying quantiphyse/packages/core/simulation/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/simulation 2025-09-08T16:18:17,277 copying quantiphyse/packages/core/simulation/widgets.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/simulation 2025-09-08T16:18:17,278 copying quantiphyse/packages/core/simulation/processes.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/simulation 2025-09-08T16:18:17,279 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/batch_builder 2025-09-08T16:18:17,279 copying quantiphyse/packages/core/batch_builder/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/batch_builder 2025-09-08T16:18:17,279 copying quantiphyse/packages/core/batch_builder/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/batch_builder 2025-09-08T16:18:17,280 copying quantiphyse/packages/core/batch_builder/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/batch_builder 2025-09-08T16:18:17,281 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/pca 2025-09-08T16:18:17,281 copying quantiphyse/packages/core/pca/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/pca 2025-09-08T16:18:17,281 copying quantiphyse/packages/core/pca/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/pca 2025-09-08T16:18:17,282 copying quantiphyse/packages/core/pca/process.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/pca 2025-09-08T16:18:17,282 copying quantiphyse/packages/core/pca/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/pca 2025-09-08T16:18:17,283 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels 2025-09-08T16:18:17,283 copying quantiphyse/packages/core/supervoxels/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels 2025-09-08T16:18:17,284 copying quantiphyse/packages/core/supervoxels/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels 2025-09-08T16:18:17,284 copying quantiphyse/packages/core/supervoxels/process.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels 2025-09-08T16:18:17,285 copying quantiphyse/packages/core/supervoxels/widgets.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels 2025-09-08T16:18:17,286 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/experimental 2025-09-08T16:18:17,286 copying quantiphyse/packages/core/experimental/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/experimental 2025-09-08T16:18:17,287 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/histogram 2025-09-08T16:18:17,287 copying quantiphyse/packages/core/histogram/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/histogram 2025-09-08T16:18:17,288 copying quantiphyse/packages/core/histogram/process_tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/histogram 2025-09-08T16:18:17,288 copying quantiphyse/packages/core/histogram/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/histogram 2025-09-08T16:18:17,289 copying quantiphyse/packages/core/histogram/process.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/histogram 2025-09-08T16:18:17,289 copying quantiphyse/packages/core/histogram/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/histogram 2025-09-08T16:18:17,290 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/registration 2025-09-08T16:18:17,290 copying quantiphyse/packages/core/registration/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/registration 2025-09-08T16:18:17,291 copying quantiphyse/packages/core/registration/process.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/registration 2025-09-08T16:18:17,291 copying quantiphyse/packages/core/registration/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/registration 2025-09-08T16:18:17,292 copying quantiphyse/packages/core/registration/reg_method.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/registration 2025-09-08T16:18:17,293 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/clustering 2025-09-08T16:18:17,293 copying quantiphyse/packages/core/clustering/kmeans.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/clustering 2025-09-08T16:18:17,293 copying quantiphyse/packages/core/clustering/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/clustering 2025-09-08T16:18:17,294 copying quantiphyse/packages/core/clustering/process_tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/clustering 2025-09-08T16:18:17,295 copying quantiphyse/packages/core/clustering/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/clustering 2025-09-08T16:18:17,295 copying quantiphyse/packages/core/clustering/widgets.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/clustering 2025-09-08T16:18:17,296 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/roi_builder 2025-09-08T16:18:17,296 copying quantiphyse/packages/core/roi_builder/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/roi_builder 2025-09-08T16:18:17,297 copying quantiphyse/packages/core/roi_builder/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/roi_builder 2025-09-08T16:18:17,297 copying quantiphyse/packages/core/roi_builder/tools.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/roi_builder 2025-09-08T16:18:17,298 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/analysis 2025-09-08T16:18:17,298 copying quantiphyse/packages/core/analysis/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/analysis 2025-09-08T16:18:17,299 copying quantiphyse/packages/core/analysis/process_tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/analysis 2025-09-08T16:18:17,299 copying quantiphyse/packages/core/analysis/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/analysis 2025-09-08T16:18:17,300 copying quantiphyse/packages/core/analysis/widgets.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/analysis 2025-09-08T16:18:17,301 copying quantiphyse/packages/core/analysis/processes.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/analysis 2025-09-08T16:18:17,301 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/compare 2025-09-08T16:18:17,302 copying quantiphyse/packages/core/compare/tests.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/compare 2025-09-08T16:18:17,302 copying quantiphyse/packages/core/compare/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/compare 2025-09-08T16:18:17,303 copying quantiphyse/packages/core/compare/widget.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/compare 2025-09-08T16:18:17,303 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic 2025-09-08T16:18:17,304 copying quantiphyse/packages/core/supervoxels/perfusionslic/slic_superpixels_feat.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic 2025-09-08T16:18:17,304 copying quantiphyse/packages/core/supervoxels/perfusionslic/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic 2025-09-08T16:18:17,305 copying quantiphyse/packages/core/supervoxels/perfusionslic/perfusionslice_class.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic 2025-09-08T16:18:17,306 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,306 copying quantiphyse/packages/core/supervoxels/perfusionslic/additional/__init__.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,306 copying quantiphyse/packages/core/supervoxels/perfusionslic/additional/io.py -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,307 running egg_info 2025-09-08T16:18:17,382 writing quantiphyse.egg-info/PKG-INFO 2025-09-08T16:18:17,384 writing dependency_links to quantiphyse.egg-info/dependency_links.txt 2025-09-08T16:18:17,384 writing entry points to quantiphyse.egg-info/entry_points.txt 2025-09-08T16:18:17,385 writing requirements to quantiphyse.egg-info/requires.txt 2025-09-08T16:18:17,385 writing top-level names to quantiphyse.egg-info/top_level.txt 2025-09-08T16:18:17,468 reading manifest file 'quantiphyse.egg-info/SOURCES.txt' 2025-09-08T16:18:17,482 reading manifest template 'MANIFEST.in' 2025-09-08T16:18:17,545 warning: no files found matching '*.cc' under directory 'quantiphyse' 2025-09-08T16:18:17,585 adding license file 'LICENSE' 2025-09-08T16:18:17,598 writing manifest file 'quantiphyse.egg-info/SOURCES.txt' 2025-09-08T16:18:17,601 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'quantiphyse.packages.core.supervoxels.src' is absent from the `packages` configuration. 2025-09-08T16:18:17,601 !! 2025-09-08T16:18:17,601 ******************************************************************************** 2025-09-08T16:18:17,601 ############################ 2025-09-08T16:18:17,601 # Package would be ignored # 2025-09-08T16:18:17,601 ############################ 2025-09-08T16:18:17,601 Python recognizes 'quantiphyse.packages.core.supervoxels.src' as an importable package[^1], 2025-09-08T16:18:17,601 but it is absent from setuptools' `packages` configuration. 2025-09-08T16:18:17,601 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T16:18:17,602 package, please make sure that 'quantiphyse.packages.core.supervoxels.src' is explicitly added 2025-09-08T16:18:17,602 to the `packages` configuration field. 2025-09-08T16:18:17,602 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T16:18:17,602 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T16:18:17,602 instead of `find_packages(...)`/`find:`). 2025-09-08T16:18:17,602 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T16:18:17,602 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T16:18:17,603 If you don't want 'quantiphyse.packages.core.supervoxels.src' to be distributed and are 2025-09-08T16:18:17,603 already explicitly excluding 'quantiphyse.packages.core.supervoxels.src' via 2025-09-08T16:18:17,603 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T16:18:17,603 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T16:18:17,603 combination with a more fine grained `package-data` configuration. 2025-09-08T16:18:17,603 You can read more about "package data files" on setuptools documentation page: 2025-09-08T16:18:17,603 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T16:18:17,604 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T16:18:17,604 even if it does not contain any `.py` files. 2025-09-08T16:18:17,604 On the other hand, currently there is no concept of package data 2025-09-08T16:18:17,604 directory, all directories are treated like packages. 2025-09-08T16:18:17,604 ******************************************************************************** 2025-09-08T16:18:17,604 !! 2025-09-08T16:18:17,604 check.warn(importable) 2025-09-08T16:18:17,604 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'quantiphyse.packages.core.t1.src' is absent from the `packages` configuration. 2025-09-08T16:18:17,604 !! 2025-09-08T16:18:17,605 ******************************************************************************** 2025-09-08T16:18:17,605 ############################ 2025-09-08T16:18:17,605 # Package would be ignored # 2025-09-08T16:18:17,605 ############################ 2025-09-08T16:18:17,605 Python recognizes 'quantiphyse.packages.core.t1.src' as an importable package[^1], 2025-09-08T16:18:17,605 but it is absent from setuptools' `packages` configuration. 2025-09-08T16:18:17,605 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T16:18:17,605 package, please make sure that 'quantiphyse.packages.core.t1.src' is explicitly added 2025-09-08T16:18:17,605 to the `packages` configuration field. 2025-09-08T16:18:17,605 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T16:18:17,606 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T16:18:17,606 instead of `find_packages(...)`/`find:`). 2025-09-08T16:18:17,606 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T16:18:17,606 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T16:18:17,606 If you don't want 'quantiphyse.packages.core.t1.src' to be distributed and are 2025-09-08T16:18:17,606 already explicitly excluding 'quantiphyse.packages.core.t1.src' via 2025-09-08T16:18:17,606 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T16:18:17,606 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T16:18:17,606 combination with a more fine grained `package-data` configuration. 2025-09-08T16:18:17,607 You can read more about "package data files" on setuptools documentation page: 2025-09-08T16:18:17,607 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T16:18:17,607 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T16:18:17,607 even if it does not contain any `.py` files. 2025-09-08T16:18:17,607 On the other hand, currently there is no concept of package data 2025-09-08T16:18:17,607 directory, all directories are treated like packages. 2025-09-08T16:18:17,607 ******************************************************************************** 2025-09-08T16:18:17,608 !! 2025-09-08T16:18:17,608 check.warn(importable) 2025-09-08T16:18:17,608 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'quantiphyse.packages.core.t1.src.test' is absent from the `packages` configuration. 2025-09-08T16:18:17,608 !! 2025-09-08T16:18:17,608 ******************************************************************************** 2025-09-08T16:18:17,608 ############################ 2025-09-08T16:18:17,608 # Package would be ignored # 2025-09-08T16:18:17,608 ############################ 2025-09-08T16:18:17,608 Python recognizes 'quantiphyse.packages.core.t1.src.test' as an importable package[^1], 2025-09-08T16:18:17,609 but it is absent from setuptools' `packages` configuration. 2025-09-08T16:18:17,609 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-08T16:18:17,609 package, please make sure that 'quantiphyse.packages.core.t1.src.test' is explicitly added 2025-09-08T16:18:17,609 to the `packages` configuration field. 2025-09-08T16:18:17,609 Alternatively, you can also rely on setuptools' discovery methods 2025-09-08T16:18:17,609 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-08T16:18:17,609 instead of `find_packages(...)`/`find:`). 2025-09-08T16:18:17,609 You can read more about "package discovery" on setuptools documentation page: 2025-09-08T16:18:17,610 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-08T16:18:17,610 If you don't want 'quantiphyse.packages.core.t1.src.test' to be distributed and are 2025-09-08T16:18:17,610 already explicitly excluding 'quantiphyse.packages.core.t1.src.test' via 2025-09-08T16:18:17,610 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-08T16:18:17,610 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-08T16:18:17,610 combination with a more fine grained `package-data` configuration. 2025-09-08T16:18:17,610 You can read more about "package data files" on setuptools documentation page: 2025-09-08T16:18:17,610 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-08T16:18:17,611 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-08T16:18:17,611 even if it does not contain any `.py` files. 2025-09-08T16:18:17,611 On the other hand, currently there is no concept of package data 2025-09-08T16:18:17,611 directory, all directories are treated like packages. 2025-09-08T16:18:17,611 ******************************************************************************** 2025-09-08T16:18:17,611 !! 2025-09-08T16:18:17,611 check.warn(importable) 2025-09-08T16:18:17,615 copying quantiphyse/icons/README.txt -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,615 copying quantiphyse/icons/batch.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,616 copying quantiphyse/icons/batch.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,616 copying quantiphyse/icons/bucket.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,617 copying quantiphyse/icons/bucket.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,617 copying quantiphyse/icons/cest.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,618 copying quantiphyse/icons/cest.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,618 copying quantiphyse/icons/citation.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,619 copying quantiphyse/icons/citation.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,619 copying quantiphyse/icons/clear.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,620 copying quantiphyse/icons/clear.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,620 copying quantiphyse/icons/close.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,621 copying quantiphyse/icons/close.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,621 copying quantiphyse/icons/clustering.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,622 copying quantiphyse/icons/clustering.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,622 copying quantiphyse/icons/compare.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,623 copying quantiphyse/icons/compare.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,624 copying quantiphyse/icons/console.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,624 copying quantiphyse/icons/console.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,625 copying quantiphyse/icons/crosshairs.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,625 copying quantiphyse/icons/crosshairs.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,626 copying quantiphyse/icons/curve_view.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,626 copying quantiphyse/icons/curve_view.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,627 copying quantiphyse/icons/data.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,627 copying quantiphyse/icons/data.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,628 copying quantiphyse/icons/double_icon.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,628 copying quantiphyse/icons/double_icon_store.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,629 copying quantiphyse/icons/down.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,630 copying quantiphyse/icons/down.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,630 copying quantiphyse/icons/edit.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,631 copying quantiphyse/icons/edit.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,631 copying quantiphyse/icons/ellipse.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,632 copying quantiphyse/icons/ellipse.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,632 copying quantiphyse/icons/eraser.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,633 copying quantiphyse/icons/eraser.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,633 copying quantiphyse/icons/fabber_usage.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,636 copying quantiphyse/icons/image_export.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,636 copying quantiphyse/icons/image_export.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,637 copying quantiphyse/icons/inspect.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,637 copying quantiphyse/icons/inspect.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,638 copying quantiphyse/icons/levels.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,638 copying quantiphyse/icons/levels.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,639 copying quantiphyse/icons/main_data.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,639 copying quantiphyse/icons/main_data.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,640 copying quantiphyse/icons/main_icon.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,641 copying quantiphyse/icons/main_icon.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,641 copying quantiphyse/icons/main_icon_store.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,642 copying quantiphyse/icons/main_ovl.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,642 copying quantiphyse/icons/main_ovl.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,643 copying quantiphyse/icons/maths.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,643 copying quantiphyse/icons/maths.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,644 copying quantiphyse/icons/meanvals.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,645 copying quantiphyse/icons/meanvals.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,645 copying quantiphyse/icons/options.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,646 copying quantiphyse/icons/options.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,646 copying quantiphyse/icons/package.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,647 copying quantiphyse/icons/package.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,647 copying quantiphyse/icons/painter.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,648 copying quantiphyse/icons/painter.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,649 copying quantiphyse/icons/path4134.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,650 copying quantiphyse/icons/pen.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,650 copying quantiphyse/icons/pen.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,651 copying quantiphyse/icons/pencil.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,651 copying quantiphyse/icons/pencil.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,652 copying quantiphyse/icons/pick.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,652 copying quantiphyse/icons/pick.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,653 copying quantiphyse/icons/picture.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,653 copying quantiphyse/icons/picture.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,654 copying quantiphyse/icons/pk.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,654 copying quantiphyse/icons/pk.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,655 copying quantiphyse/icons/polygon.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,655 copying quantiphyse/icons/polygon.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,656 copying quantiphyse/icons/quantiphyse.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,657 copying quantiphyse/icons/quantiphyse.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,657 copying quantiphyse/icons/quantiphyse_100.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,658 copying quantiphyse/icons/quantiphyse_125.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,658 copying quantiphyse/icons/quantiphyse_75.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,659 copying quantiphyse/icons/question-mark.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,659 copying quantiphyse/icons/question-mark.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,660 copying quantiphyse/icons/rect2987.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,661 copying quantiphyse/icons/rectangle.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,661 copying quantiphyse/icons/rectangle.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,661 copying quantiphyse/icons/reg.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,662 copying quantiphyse/icons/reg.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,662 copying quantiphyse/icons/resample.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,663 copying quantiphyse/icons/resample.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,664 copying quantiphyse/icons/roi.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,664 copying quantiphyse/icons/roi.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,665 copying quantiphyse/icons/roi2.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,665 copying quantiphyse/icons/roi_builder.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,666 copying quantiphyse/icons/roi_builder.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,666 copying quantiphyse/icons/roi_data.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,667 copying quantiphyse/icons/roi_data.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,667 copying quantiphyse/icons/sv.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,668 copying quantiphyse/icons/sv.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,668 copying quantiphyse/icons/t10.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,669 copying quantiphyse/icons/t10.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,669 copying quantiphyse/icons/up.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,670 copying quantiphyse/icons/up.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,670 copying quantiphyse/icons/visible.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,671 copying quantiphyse/icons/visible.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,671 copying quantiphyse/icons/volumes.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,672 copying quantiphyse/icons/volumes.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,672 copying quantiphyse/icons/voxel.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,673 copying quantiphyse/icons/voxel.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,673 copying quantiphyse/icons/voxel_scaling_off.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,674 copying quantiphyse/icons/voxel_scaling_on.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,674 copying quantiphyse/icons/walker.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,675 copying quantiphyse/icons/walker.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/icons 2025-09-08T16:18:17,675 copying quantiphyse/resources/checkbox.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/resources 2025-09-08T16:18:17,676 copying quantiphyse/resources/darkorange.stylesheet -> build/lib.linux-armv7l-cpython-313/quantiphyse/resources 2025-09-08T16:18:17,676 copying quantiphyse/resources/down_arrow.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/resources 2025-09-08T16:18:17,677 copying quantiphyse/resources/handle.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/resources 2025-09-08T16:18:17,677 copying quantiphyse/packages/core/t1/t1_model.cpp -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1 2025-09-08T16:18:17,680 copying quantiphyse/packages/core/t1/t1_model.pyx -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1 2025-09-08T16:18:17,680 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src 2025-09-08T16:18:17,681 copying quantiphyse/packages/core/t1/src/T10_calculation.cpp -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src 2025-09-08T16:18:17,681 copying quantiphyse/packages/core/t1/src/T10_calculation.h -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src 2025-09-08T16:18:17,682 copying quantiphyse/packages/core/t1/src/linear_regression.cpp -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src 2025-09-08T16:18:17,682 copying quantiphyse/packages/core/t1/src/linear_regression.h -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src 2025-09-08T16:18:17,683 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src/test 2025-09-08T16:18:17,683 copying quantiphyse/packages/core/t1/src/test/CMakeLists.txt -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src/test 2025-09-08T16:18:17,684 copying quantiphyse/packages/core/t1/src/test/example.cpp -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src/test 2025-09-08T16:18:17,684 copying quantiphyse/packages/core/smoothing/smooth.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/smoothing 2025-09-08T16:18:17,685 copying quantiphyse/packages/core/smoothing/smooth.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/smoothing 2025-09-08T16:18:17,685 copying quantiphyse/packages/core/radialprofile/rp.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/radialprofile 2025-09-08T16:18:17,686 copying quantiphyse/packages/core/radialprofile/rp.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/radialprofile 2025-09-08T16:18:17,686 copying quantiphyse/packages/core/pca/pca.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/pca 2025-09-08T16:18:17,687 copying quantiphyse/packages/core/pca/pca.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/pca 2025-09-08T16:18:17,687 creating build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/src 2025-09-08T16:18:17,688 copying quantiphyse/packages/core/supervoxels/src/processing.cpp -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/src 2025-09-08T16:18:17,688 copying quantiphyse/packages/core/supervoxels/src/processing.h -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/src 2025-09-08T16:18:17,689 copying quantiphyse/packages/core/histogram/hist.png -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/histogram 2025-09-08T16:18:17,689 copying quantiphyse/packages/core/histogram/hist.svg -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/histogram 2025-09-08T16:18:17,690 copying quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.c -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic 2025-09-08T16:18:17,696 copying quantiphyse/packages/core/supervoxels/perfusionslic/_slic_feat.pyx -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic 2025-09-08T16:18:17,696 copying quantiphyse/packages/core/supervoxels/perfusionslic/additional/bspline_smoothing.c -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,701 copying quantiphyse/packages/core/supervoxels/perfusionslic/additional/bspline_smoothing.pyx -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,702 copying quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.c -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,707 copying quantiphyse/packages/core/supervoxels/perfusionslic/additional/create_im.pyx -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,708 copying quantiphyse/packages/core/supervoxels/perfusionslic/additional/processing.cpp -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,710 copying quantiphyse/packages/core/supervoxels/perfusionslic/additional/processing.pyx -> build/lib.linux-armv7l-cpython-313/quantiphyse/packages/core/supervoxels/perfusionslic/additional 2025-09-08T16:18:17,717 running build_ext 2025-09-08T16:18:17,724 building 'quantiphyse.packages.core.t1.t1_model' extension 2025-09-08T16:18:17,725 creating build/temp.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src 2025-09-08T16:18:17,726 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Iquantiphyse/packages/core/t1/src/ -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c quantiphyse/packages/core/t1/src/T10_calculation.cpp -o build/temp.linux-armv7l-cpython-313/quantiphyse/packages/core/t1/src/T10_calculation.o 2025-09-08T16:18:18,497 In file included from quantiphyse/packages/core/t1/src/T10_calculation.cpp:5: 2025-09-08T16:18:18,497 quantiphyse/packages/core/t1/src/T10_calculation.h:11:16: error: conflicting declaration ‘typedef size_t ulong’ 2025-09-08T16:18:18,497 11 | typedef size_t ulong; 2025-09-08T16:18:18,497 | ^~~~~ 2025-09-08T16:18:18,497 In file included from quantiphyse/packages/core/t1/src/T10_calculation.h:8: 2025-09-08T16:18:18,498 /usr/include/arm-linux-gnueabihf/sys/types.h:148:27: note: previous declaration as ‘typedef long unsigned int ulong’ 2025-09-08T16:18:18,498 148 | typedef unsigned long int ulong; 2025-09-08T16:18:18,498 | ^~~~~ 2025-09-08T16:18:19,574 quantiphyse/packages/core/t1/src/T10_calculation.cpp: In function ‘double T10_single_linear(std::vector&, std::vector&, ulong, double)’: 2025-09-08T16:18:19,574 quantiphyse/packages/core/t1/src/T10_calculation.cpp:54:42: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 2025-09-08T16:18:19,574 54 | pair ab = linreg(y, x); 2025-09-08T16:18:19,574 | ^ 2025-09-08T16:18:19,599 error: command '/usr/bin/arm-linux-gnueabihf-g++' failed with exit code 1 2025-09-08T16:18:19,773 ERROR: python setup.py bdist_wheel exited with 1 2025-09-08T16:18:19,785 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-08T16:18:19,785 exec(compile('"'"''"'"''"'"' 2025-09-08T16:18:19,785 # This is -- a caller that pip uses to run setup.py 2025-09-08T16:18:19,785 # 2025-09-08T16:18:19,785 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T16:18:19,785 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T16:18:19,785 # - It provides a clear error message when setuptools is not installed. 2025-09-08T16:18:19,785 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T16:18:19,785 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T16:18:19,785 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T16:18:19,785 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T16:18:19,785 import os, sys, tokenize, traceback 2025-09-08T16:18:19,785 2025-09-08T16:18:19,785 try: 2025-09-08T16:18:19,785 import setuptools 2025-09-08T16:18:19,785 except ImportError: 2025-09-08T16:18:19,785 print( 2025-09-08T16:18:19,785 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T16:18:19,785 "the build environment with exception:", 2025-09-08T16:18:19,785 file=sys.stderr, 2025-09-08T16:18:19,785 ) 2025-09-08T16:18:19,785 traceback.print_exc() 2025-09-08T16:18:19,785 sys.exit(1) 2025-09-08T16:18:19,785 2025-09-08T16:18:19,785 __file__ = %r 2025-09-08T16:18:19,785 sys.argv[0] = __file__ 2025-09-08T16:18:19,785 2025-09-08T16:18:19,785 if os.path.exists(__file__): 2025-09-08T16:18:19,785 filename = __file__ 2025-09-08T16:18:19,785 with tokenize.open(__file__) as f: 2025-09-08T16:18:19,785 setup_py_code = f.read() 2025-09-08T16:18:19,785 else: 2025-09-08T16:18:19,785 filename = "" 2025-09-08T16:18:19,785 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T16:18:19,785 2025-09-08T16:18:19,785 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T16:18:19,785 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-m1cyhfsy/quantiphyse_e80bf25e6cf0485fad12913a6a8e3153/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-gr55z0e3[/] 2025-09-08T16:18:19,785 [bold magenta]cwd[/]: /tmp/pip-wheel-m1cyhfsy/quantiphyse_e80bf25e6cf0485fad12913a6a8e3153/ 2025-09-08T16:18:19,786 Building wheel for quantiphyse (setup.py): finished with status 'error' 2025-09-08T16:18:19,786 ERROR: Failed building wheel for quantiphyse 2025-09-08T16:18:19,787 Running setup.py clean for quantiphyse 2025-09-08T16:18:19,788 Running command python setup.py clean 2025-09-08T16:18:20,701 fatal: not a git repository (or any parent up to mount point /) 2025-09-08T16:18:20,701 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-08T16:18:20,708 fatal: not a git repository (or any parent up to mount point /) 2025-09-08T16:18:20,709 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). 2025-09-08T16:18:21,456 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T16:18:21,456 !! 2025-09-08T16:18:21,456 ******************************************************************************** 2025-09-08T16:18:21,456 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T16:18:21,456 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T16:18:21,456 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T16:18:21,457 or your builds will no longer be supported. 2025-09-08T16:18:21,457 ******************************************************************************** 2025-09-08T16:18:21,457 !! 2025-09-08T16:18:21,457 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T16:18:21,671 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-08T16:18:21,671 !! 2025-09-08T16:18:21,671 ******************************************************************************** 2025-09-08T16:18:21,671 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-08T16:18:21,671 License :: Free for non-commercial use 2025-09-08T16:18:21,672 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-08T16:18:21,672 ******************************************************************************** 2025-09-08T16:18:21,672 !! 2025-09-08T16:18:21,672 self._finalize_license_expression() 2025-09-08T16:18:21,739 running clean 2025-09-08T16:18:21,875 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T16:18:21,875 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-08T16:18:21,886 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-08T16:18:21,887 'build/scripts-3.13' does not exist -- can't clean it 2025-09-08T16:18:21,887 removing 'build' 2025-09-08T16:18:22,055 Failed to build quantiphyse 2025-09-08T16:18:22,056 ERROR: Failed to build one or more wheels 2025-09-08T16:18:22,057 Exception information: 2025-09-08T16:18:22,057 Traceback (most recent call last): 2025-09-08T16:18:22,057 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T16:18:22,057 status = _inner_run() 2025-09-08T16:18:22,057 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T16:18:22,057 return self.run(options, args) 2025-09-08T16:18:22,057 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T16:18:22,057 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T16:18:22,057 return func(self, options, args) 2025-09-08T16:18:22,057 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-08T16:18:22,057 raise CommandError("Failed to build one or more wheels") 2025-09-08T16:18:22,057 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-08T16:18:22,061 Removed build tracker: '/tmp/pip-build-tracker-7jqbbm4l'