2025-09-08T18:19:39,244 Created temporary directory: /tmp/pip-build-tracker-o2nmskb6 2025-09-08T18:19:39,244 Initialized build tracking at /tmp/pip-build-tracker-o2nmskb6 2025-09-08T18:19:39,245 Created build tracker: /tmp/pip-build-tracker-o2nmskb6 2025-09-08T18:19:39,245 Entered build tracker: /tmp/pip-build-tracker-o2nmskb6 2025-09-08T18:19:39,245 Created temporary directory: /tmp/pip-wheel-_r7g17yp 2025-09-08T18:19:39,248 Created temporary directory: /tmp/pip-ephem-wheel-cache-3l04t00k 2025-09-08T18:19:39,308 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T18:19:39,310 2 location(s) to search for versions of hits: 2025-09-08T18:19:39,310 * https://pypi.org/simple/hits/ 2025-09-08T18:19:39,310 * https://www.piwheels.org/simple/hits/ 2025-09-08T18:19:39,311 Fetching project page and analyzing links: https://pypi.org/simple/hits/ 2025-09-08T18:19:39,311 Getting page https://pypi.org/simple/hits/ 2025-09-08T18:19:39,312 Found index url https://pypi.org/simple/ 2025-09-08T18:19:39,539 Fetched page https://pypi.org/simple/hits/ as application/vnd.pypi.simple.v1+json 2025-09-08T18:19:39,544 Found link https://files.pythonhosted.org/packages/bd/a4/dab4eb36d5c301d6f60030768d14deae128e5baa9d6344eda764825d5ab7/hits-0.0.2.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.0.2 2025-09-08T18:19:39,545 Found link https://files.pythonhosted.org/packages/4f/da/e8976e983ced405ede20b732db2cc427af7c93d14dcaf62147303742d7ec/hits-0.0.4.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.0.4 2025-09-08T18:19:39,545 Found link https://files.pythonhosted.org/packages/3b/b9/f2184537f182cb3456dbe14209b08019a80f064c5ec76ca0e29c01e85b45/hits-0.0.5.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.0.5 2025-09-08T18:19:39,546 Found link https://files.pythonhosted.org/packages/bc/d3/e1c183519ed10a4c5aecb860080c4d0178419ded77dbfd10b249f991dbca/hits-0.0.6.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.0.6 2025-09-08T18:19:39,546 Found link https://files.pythonhosted.org/packages/36/12/1e518a921f843e31b49c74080310bd0a99d4bc5701bb9c26e74e4d7e293d/hits-0.0.7.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.0.7 2025-09-08T18:19:39,547 Found link https://files.pythonhosted.org/packages/16/eb/7875f9d6728a25ea1ebf15e1b1fd7f17956b6bd984247a9402d3a3354530/hits-0.1.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.1 2025-09-08T18:19:39,547 Found link https://files.pythonhosted.org/packages/3a/dd/e58d8ffe23a21e410971157abab3978d1bb340f426bf59baf459beb432b7/hits-0.3.0.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.3.0 2025-09-08T18:19:39,548 Found link https://files.pythonhosted.org/packages/47/ab/a2733d5f722490b075536e6393ed40bba48e10cb4b731d7f5e9e7c98b676/hits-0.3.1.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.3.1 2025-09-08T18:19:39,548 Found link https://files.pythonhosted.org/packages/bd/09/2bb92b6fc677a327959a7a10d6df0fc0d437aa01d3a263edfe47d0550613/hits-0.3.2.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.6), version: 0.3.2 2025-09-08T18:19:39,549 Found link https://files.pythonhosted.org/packages/12/04/2ad6e2edeedbffb84b4f49459dc90d83342518d6eaa30f67d443af1b9f74/hits-0.3.3.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.7), version: 0.3.3 2025-09-08T18:19:39,550 Found link https://files.pythonhosted.org/packages/aa/59/8b7a6872e46ce30bf1cd07a8c0851174cdc3bdb36ff40363b00717659b66/hits-0.4.0.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.8), version: 0.4.0 2025-09-08T18:19:39,551 Found link https://files.pythonhosted.org/packages/df/c0/3c6ade0de07d926435e0feb5ea9532f6dbd5a3dae32b28836d49028a0955/hits-0.4.5.tar.gz (from https://pypi.org/simple/hits/) (requires-python:>=3.8), version: 0.4.5 2025-09-08T18:19:39,552 Fetching project page and analyzing links: https://www.piwheels.org/simple/hits/ 2025-09-08T18:19:39,552 Getting page https://www.piwheels.org/simple/hits/ 2025-09-08T18:19:39,554 Found index url https://www.piwheels.org/simple/ 2025-09-08T18:19:39,663 Fetched page https://www.piwheels.org/simple/hits/ as text/html 2025-09-08T18:19:39,677 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.4.5-cp311-cp311-linux_armv6l.whl#sha256=3fe8a0769eb8f9ea18c73f1b9fa90a56ce000acc7f0a30b0cc7df0d5464bb3eb (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.8) 2025-09-08T18:19:39,677 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.4.5-cp311-cp311-linux_armv7l.whl#sha256=3fe8a0769eb8f9ea18c73f1b9fa90a56ce000acc7f0a30b0cc7df0d5464bb3eb (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.8) 2025-09-08T18:19:39,677 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.4.0-cp39-cp39-linux_armv7l.whl#sha256=c6238eea7615bd872b1c307d46da12dfd252324b3e4e942e1671d0e88522675f (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.8) 2025-09-08T18:19:39,678 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.4.0-cp39-cp39-linux_armv6l.whl#sha256=c6238eea7615bd872b1c307d46da12dfd252324b3e4e942e1671d0e88522675f (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.8) 2025-09-08T18:19:39,678 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.4.0-cp311-cp311-linux_armv6l.whl#sha256=b656efcd8eb4f04d13764c254f5cabc69b5fd130680486e735d0bd5ee2ddf815 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.8) 2025-09-08T18:19:39,678 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.4.0-cp311-cp311-linux_armv7l.whl#sha256=b656efcd8eb4f04d13764c254f5cabc69b5fd130680486e735d0bd5ee2ddf815 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.8) 2025-09-08T18:19:39,678 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.3-cp311-cp311-linux_armv6l.whl#sha256=611a46a9cde2aa43947a5038af4bab9a5457a1e894258fa55182f3c7647d7b0b (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.7) 2025-09-08T18:19:39,678 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.3-cp311-cp311-linux_armv7l.whl#sha256=611a46a9cde2aa43947a5038af4bab9a5457a1e894258fa55182f3c7647d7b0b (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.7) 2025-09-08T18:19:39,679 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.3-cp37-cp37m-linux_armv6l.whl#sha256=f93bd14eaec02c34f92b21d01a03cc73b5f3d63b4e15eb2f75a5d889e16b23b1 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.7) 2025-09-08T18:19:39,679 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.3-cp37-cp37m-linux_armv7l.whl#sha256=f93bd14eaec02c34f92b21d01a03cc73b5f3d63b4e15eb2f75a5d889e16b23b1 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.7) 2025-09-08T18:19:39,679 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.3-cp39-cp39-linux_armv6l.whl#sha256=267f541121a60956c8ff24664d2c0c8b1538891691d46440e6afcede087bdb9a (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.7) 2025-09-08T18:19:39,679 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.3-cp39-cp39-linux_armv7l.whl#sha256=267f541121a60956c8ff24664d2c0c8b1538891691d46440e6afcede087bdb9a (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.7) 2025-09-08T18:19:39,679 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.2-cp311-cp311-linux_armv6l.whl#sha256=1326f54d5d38b8347bb2dc8e8cd3d7675d1473de5b524f7b7c2586293dc09b60 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,679 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.2-cp311-cp311-linux_armv7l.whl#sha256=1326f54d5d38b8347bb2dc8e8cd3d7675d1473de5b524f7b7c2586293dc09b60 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,680 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.2-cp37-cp37m-linux_armv6l.whl#sha256=582be6734d637bd419b8145c18c730cdc79901e36f57b9223a6465c05b88a3dd (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,680 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.2-cp37-cp37m-linux_armv7l.whl#sha256=582be6734d637bd419b8145c18c730cdc79901e36f57b9223a6465c05b88a3dd (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,680 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.2-cp39-cp39-linux_armv6l.whl#sha256=4eab2f0116be54869ec642b17f8f09e1990407b2f6462ab72d76d942ba7e1019 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,680 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.2-cp39-cp39-linux_armv7l.whl#sha256=4eab2f0116be54869ec642b17f8f09e1990407b2f6462ab72d76d942ba7e1019 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,680 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.1-cp311-cp311-linux_armv6l.whl#sha256=20df3fb29a4755f2384aa3dddd56a4e54b1020fa43e42764ee1904c94be18428 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,681 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.1-cp311-cp311-linux_armv7l.whl#sha256=20df3fb29a4755f2384aa3dddd56a4e54b1020fa43e42764ee1904c94be18428 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,681 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.1-cp37-cp37m-linux_armv6l.whl#sha256=03145e46f132a4625aeb1e642eb6ef1b90df01d6de1535250f0655db65ca0ee7 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,681 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.1-cp37-cp37m-linux_armv7l.whl#sha256=03145e46f132a4625aeb1e642eb6ef1b90df01d6de1535250f0655db65ca0ee7 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,681 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.1-cp39-cp39-linux_armv6l.whl#sha256=6acffbbf2bee82e9f45df24d9a128aafec76486ff8bfdc070f6ff920c7011b6f (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,681 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.1-cp39-cp39-linux_armv7l.whl#sha256=6acffbbf2bee82e9f45df24d9a128aafec76486ff8bfdc070f6ff920c7011b6f (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,681 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.0-cp311-cp311-linux_armv6l.whl#sha256=975ca5bebf78cbd71a54f7e317a209991034059ba425f7f699b3b32b487ac5f9 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,682 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.0-cp311-cp311-linux_armv7l.whl#sha256=975ca5bebf78cbd71a54f7e317a209991034059ba425f7f699b3b32b487ac5f9 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,682 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.0-cp39-cp39-linux_armv6l.whl#sha256=388bfac65d639c63ae8daf10800ce197b659cf00312bbdad8f7803bbd811bdc6 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,682 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.0-cp39-cp39-linux_armv7l.whl#sha256=388bfac65d639c63ae8daf10800ce197b659cf00312bbdad8f7803bbd811bdc6 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,682 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.0-cp37-cp37m-linux_armv6l.whl#sha256=4e677c5413d6d14f2d0130876238c87e8548bb8900539699e3657bdf0bbbca50 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,682 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.3.0-cp37-cp37m-linux_armv7l.whl#sha256=4e677c5413d6d14f2d0130876238c87e8548bb8900539699e3657bdf0bbbca50 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,683 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.1-cp39-cp39-linux_armv6l.whl#sha256=c0a82b4ea4e5c8542c40fa409ad64937628be2e5f3258a2430ac2b3cc7ab1a5d (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,683 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.1-cp39-cp39-linux_armv7l.whl#sha256=c0a82b4ea4e5c8542c40fa409ad64937628be2e5f3258a2430ac2b3cc7ab1a5d (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,683 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.1-cp37-cp37m-linux_armv6l.whl#sha256=3b0d234001a22f5c3bad08eeac6145afc45f3ede43b12b6d2c40f35c09201086 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,683 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.1-cp37-cp37m-linux_armv7l.whl#sha256=3b0d234001a22f5c3bad08eeac6145afc45f3ede43b12b6d2c40f35c09201086 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,683 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.1-cp311-cp311-linux_armv6l.whl#sha256=45ea44f61257b3735a5eecbf1b4c7ecf3f2deaca1b38b0337696e1bd1649a563 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,683 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.1-cp311-cp311-linux_armv7l.whl#sha256=45ea44f61257b3735a5eecbf1b4c7ecf3f2deaca1b38b0337696e1bd1649a563 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,684 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.7-cp39-cp39-linux_armv6l.whl#sha256=0c6ce76b05fe639231140af7df579dfeb88ab52734a436dd97df8efb3ea6e06a (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,684 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.7-cp39-cp39-linux_armv7l.whl#sha256=0c6ce76b05fe639231140af7df579dfeb88ab52734a436dd97df8efb3ea6e06a (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,684 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.7-cp37-cp37m-linux_armv6l.whl#sha256=d9116ccc1abdab784990f0818689bb36849ceba024d77e11084d27a0d80e5da7 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,684 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.7-cp37-cp37m-linux_armv7l.whl#sha256=d9116ccc1abdab784990f0818689bb36849ceba024d77e11084d27a0d80e5da7 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,684 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.7-cp311-cp311-linux_armv6l.whl#sha256=318ae8df2705c46851a89c5becead17646b1e713c2c26493e529e13d62cb21fe (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,685 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.7-cp311-cp311-linux_armv7l.whl#sha256=318ae8df2705c46851a89c5becead17646b1e713c2c26493e529e13d62cb21fe (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,685 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.6-cp39-cp39-linux_armv6l.whl#sha256=152dfc6ae3dec61dd8c836318552cf407f6cfcd8d53d40d6cf09fa170bfaefef (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,685 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.6-cp39-cp39-linux_armv7l.whl#sha256=152dfc6ae3dec61dd8c836318552cf407f6cfcd8d53d40d6cf09fa170bfaefef (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,685 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.6-cp37-cp37m-linux_armv7l.whl#sha256=0ea5b67cf13610054861e0c6477387a12c19071ca879af45b06af78f85d3dddc (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,685 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.6-cp37-cp37m-linux_armv6l.whl#sha256=0ea5b67cf13610054861e0c6477387a12c19071ca879af45b06af78f85d3dddc (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,685 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.6-cp311-cp311-linux_armv6l.whl#sha256=1d13b8bc1667991e049f9d8c256655f107977739992b222f628b29c5490fcae5 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,686 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.6-cp311-cp311-linux_armv7l.whl#sha256=1d13b8bc1667991e049f9d8c256655f107977739992b222f628b29c5490fcae5 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,686 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.5-cp39-cp39-linux_armv6l.whl#sha256=c356a15220764f7c2a991d778edda826574d5428f56fb47fa994cf2578309c63 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,686 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.5-cp39-cp39-linux_armv7l.whl#sha256=c356a15220764f7c2a991d778edda826574d5428f56fb47fa994cf2578309c63 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,686 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.5-cp37-cp37m-linux_armv7l.whl#sha256=7e7d96160387d270e99650dc5e71f0672d5eed728388dab6ea42fb1535f550fe (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,686 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.5-cp37-cp37m-linux_armv6l.whl#sha256=7e7d96160387d270e99650dc5e71f0672d5eed728388dab6ea42fb1535f550fe (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,686 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.5-cp311-cp311-linux_armv6l.whl#sha256=71faf84f2a3c84bd6abb50629679db68bd4660316110ce7a3089da2bb3a7d8b9 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,687 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.5-cp311-cp311-linux_armv7l.whl#sha256=71faf84f2a3c84bd6abb50629679db68bd4660316110ce7a3089da2bb3a7d8b9 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,687 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.4-cp39-cp39-linux_armv6l.whl#sha256=9b8a8f08764382866ddbea62bb43f555936f5cfb83d603c7b0e411f5ab1cd8f3 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,687 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.4-cp39-cp39-linux_armv7l.whl#sha256=9b8a8f08764382866ddbea62bb43f555936f5cfb83d603c7b0e411f5ab1cd8f3 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,687 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.4-cp37-cp37m-linux_armv7l.whl#sha256=c3161c56a1a2e3f266f80176935502794ec3be61b5b6a15b9eb0534fe38e9f85 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,687 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.4-cp37-cp37m-linux_armv6l.whl#sha256=c3161c56a1a2e3f266f80176935502794ec3be61b5b6a15b9eb0534fe38e9f85 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,687 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.4-cp311-cp311-linux_armv6l.whl#sha256=deaf4fee1bb4bcad59f7b161a51b4dbe82640ed2db9a80eaf873a87bb0b3968a (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,688 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.4-cp311-cp311-linux_armv7l.whl#sha256=deaf4fee1bb4bcad59f7b161a51b4dbe82640ed2db9a80eaf873a87bb0b3968a (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,688 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.2-cp39-cp39-linux_armv6l.whl#sha256=0d4ee3c8d0aa80ae0513a1d48a5cabbe4fbd428ab8c95f06151e5e0e413d7217 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,688 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.2-cp39-cp39-linux_armv7l.whl#sha256=0d4ee3c8d0aa80ae0513a1d48a5cabbe4fbd428ab8c95f06151e5e0e413d7217 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,688 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=6ef642e48ebca203f9a7c21d017f33efeddd088073b07e031722f722133c43d6 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,688 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=6ef642e48ebca203f9a7c21d017f33efeddd088073b07e031722f722133c43d6 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,688 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.2-cp311-cp311-linux_armv6l.whl#sha256=34968506ef9e4bae5ce81af583a64c749e05abc947aa5b1adb1b38f446e9b146 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,689 Skipping link: No binaries permitted for hits: https://archive1.piwheels.org/simple/hits/hits-0.0.2-cp311-cp311-linux_armv7l.whl#sha256=34968506ef9e4bae5ce81af583a64c749e05abc947aa5b1adb1b38f446e9b146 (from https://www.piwheels.org/simple/hits/) (requires-python:>=3.6) 2025-09-08T18:19:39,689 Skipping link: not a file: https://www.piwheels.org/simple/hits/ 2025-09-08T18:19:39,689 Skipping link: not a file: https://pypi.org/simple/hits/ 2025-09-08T18:19:39,713 Given no hashes to check 1 links for project 'hits': discarding no candidates 2025-09-08T18:19:39,714 Collecting hits==0.0.2 2025-09-08T18:19:39,715 Created temporary directory: /tmp/pip-unpack-dn55kt7p 2025-09-08T18:19:40,109 Downloading hits-0.0.2.tar.gz (1.1 MB) 2025-09-08T18:19:40,385 Added hits==0.0.2 from https://files.pythonhosted.org/packages/bd/a4/dab4eb36d5c301d6f60030768d14deae128e5baa9d6344eda764825d5ab7/hits-0.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-o2nmskb6' 2025-09-08T18:19:40,386 Running setup.py (path:/tmp/pip-wheel-_r7g17yp/hits_d5cc837382aa42d3a09cd4cc53a85953/setup.py) egg_info for package hits 2025-09-08T18:19:40,387 Created temporary directory: /tmp/pip-pip-egg-info-001_k3zl 2025-09-08T18:19:40,387 Preparing metadata (setup.py): started 2025-09-08T18:19:40,388 Running command python setup.py egg_info 2025-09-08T18:19:41,466 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T18:19:41,466 !! 2025-09-08T18:19:41,467 ******************************************************************************** 2025-09-08T18:19:41,467 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T18:19:41,467 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T18:19:41,468 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T18:19:41,468 or your builds will no longer be supported. 2025-09-08T18:19:41,468 ******************************************************************************** 2025-09-08T18:19:41,468 !! 2025-09-08T18:19:41,469 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T18:19:42,017 running egg_info 2025-09-08T18:19:42,091 creating /tmp/pip-pip-egg-info-001_k3zl/hits.egg-info 2025-09-08T18:19:42,091 writing /tmp/pip-pip-egg-info-001_k3zl/hits.egg-info/PKG-INFO 2025-09-08T18:19:42,093 writing dependency_links to /tmp/pip-pip-egg-info-001_k3zl/hits.egg-info/dependency_links.txt 2025-09-08T18:19:42,093 writing requirements to /tmp/pip-pip-egg-info-001_k3zl/hits.egg-info/requires.txt 2025-09-08T18:19:42,094 writing top-level names to /tmp/pip-pip-egg-info-001_k3zl/hits.egg-info/top_level.txt 2025-09-08T18:19:42,094 writing manifest file '/tmp/pip-pip-egg-info-001_k3zl/hits.egg-info/SOURCES.txt' 2025-09-08T18:19:42,396 reading manifest file '/tmp/pip-pip-egg-info-001_k3zl/hits.egg-info/SOURCES.txt' 2025-09-08T18:19:42,400 writing manifest file '/tmp/pip-pip-egg-info-001_k3zl/hits.egg-info/SOURCES.txt' 2025-09-08T18:19:42,513 Preparing metadata (setup.py): finished with status 'done' 2025-09-08T18:19:42,518 Source in /tmp/pip-wheel-_r7g17yp/hits_d5cc837382aa42d3a09cd4cc53a85953 has version 0.0.2, which satisfies requirement hits==0.0.2 from https://files.pythonhosted.org/packages/bd/a4/dab4eb36d5c301d6f60030768d14deae128e5baa9d6344eda764825d5ab7/hits-0.0.2.tar.gz 2025-09-08T18:19:42,518 Removed hits==0.0.2 from https://files.pythonhosted.org/packages/bd/a4/dab4eb36d5c301d6f60030768d14deae128e5baa9d6344eda764825d5ab7/hits-0.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-o2nmskb6' 2025-09-08T18:19:42,523 Created temporary directory: /tmp/pip-unpack-gbg67yjj 2025-09-08T18:19:42,524 Created temporary directory: /tmp/pip-unpack-npfompp1 2025-09-08T18:19:42,524 Building wheels for collected packages: hits 2025-09-08T18:19:42,525 Created temporary directory: /tmp/pip-wheel-erqzr_20 2025-09-08T18:19:42,526 DEPRECATION: Building 'hits' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'hits'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-08T18:19:42,527 Building wheel for hits (setup.py): started 2025-09-08T18:19:42,528 Destination directory: /tmp/pip-wheel-erqzr_20 2025-09-08T18:19:42,528 Running command python setup.py bdist_wheel 2025-09-08T18:19:43,175 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-08T18:19:43,175 !! 2025-09-08T18:19:43,175 ******************************************************************************** 2025-09-08T18:19:43,175 Requirements should be satisfied by a PEP 517 installer. 2025-09-08T18:19:43,176 If you are using pip, you can try `pip install --use-pep517`. 2025-09-08T18:19:43,176 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T18:19:43,176 or your builds will no longer be supported. 2025-09-08T18:19:43,176 ******************************************************************************** 2025-09-08T18:19:43,176 !! 2025-09-08T18:19:43,176 dist.fetch_build_eggs(dist.setup_requires) 2025-09-08T18:19:43,633 running bdist_wheel 2025-09-08T18:19:44,004 running build 2025-09-08T18:19:44,004 running build_py 2025-09-08T18:19:44,080 creating build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,081 copying hits/external_sort.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,081 copying hits/adapters.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,082 copying hits/interval.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,083 copying hits/sw.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,083 copying hits/fastq.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,084 copying hits/mapping_tools.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,084 copying hits/sam.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,085 copying hits/fasta.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,086 copying hits/variants.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,086 copying hits/intensities_illumina.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,087 copying hits/visualize_structure.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,087 copying hits/__init__.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,088 copying hits/annotation.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,088 copying hits/ipython.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,089 copying hits/genetic_code.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,089 copying hits/genomes.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,090 copying hits/paired_end.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,090 copying hits/utilities.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,091 copying hits/gff.py -> build/lib.linux-armv7l-cpython-313/hits 2025-09-08T18:19:44,092 creating build/lib.linux-armv7l-cpython-313/hits/visualize 2025-09-08T18:19:44,092 copying hits/visualize/define_igv_colors.py -> build/lib.linux-armv7l-cpython-313/hits/visualize 2025-09-08T18:19:44,093 copying hits/visualize/gels.py -> build/lib.linux-armv7l-cpython-313/hits/visualize 2025-09-08T18:19:44,093 copying hits/visualize/fastq.py -> build/lib.linux-armv7l-cpython-313/hits/visualize 2025-09-08T18:19:44,094 copying hits/visualize/__init__.py -> build/lib.linux-armv7l-cpython-313/hits/visualize 2025-09-08T18:19:44,095 creating build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,095 copying hits/visualize/interactive/__init__.py -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,096 copying hits/visualize/interactive/pc.py -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,096 copying hits/visualize/interactive/external_coffeescript.py -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,100 copying hits/visualize/interactive/pc_hover.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,101 copying hits/visualize/interactive/pc_search.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,101 copying hits/visualize/interactive/scatter_size_menu.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,102 copying hits/visualize/interactive/screen_menu.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,102 copying hits/visualize/interactive/scatter_label_button.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,103 copying hits/visualize/interactive/scatter_size.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,103 copying hits/visualize/interactive/scatter_subset_menu.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,104 copying hits/visualize/interactive/scatter_alpha.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,104 copying hits/visualize/interactive/scatter_color.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,105 copying hits/visualize/interactive/scatter_selection.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,105 copying hits/visualize/interactive/scatter_cluster_button.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,106 copying hits/visualize/interactive/screen_scatter_selection.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,106 copying hits/visualize/interactive/scatter_heatmap.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,107 copying hits/visualize/interactive/scatter_grid.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,107 copying hits/visualize/interactive/scatter_annotation_button.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,108 copying hits/visualize/interactive/scatter_label.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,108 copying hits/visualize/interactive/scatter_two_level_menu.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,109 copying hits/visualize/interactive/screen_range.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,109 copying hits/visualize/interactive/scatter_range.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,110 copying hits/visualize/interactive/scatter_menu.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,110 copying hits/visualize/interactive/scatter_zoom_to_data.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,111 copying hits/visualize/interactive/pc_clear.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,111 copying hits/visualize/interactive/pc_selection.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,112 copying hits/visualize/interactive/scatter_search.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,112 copying hits/visualize/interactive/scatter_case_sensitive.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,113 copying hits/visualize/interactive/scatter_save_button.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,113 copying hits/visualize/interactive/pc_box_select.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,114 copying hits/visualize/interactive/screen_errorbars_button.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,114 copying hits/visualize/interactive/screen_significance_filter.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,115 copying hits/visualize/interactive/screen_search.coffee -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,115 copying hits/visualize/interactive/example_df.txt -> build/lib.linux-armv7l-cpython-313/hits/visualize/interactive 2025-09-08T18:19:44,127 running build_ext 2025-09-08T18:19:44,458 Compiling hits/adapters_cython.pyx because it changed. 2025-09-08T18:19:44,458 [1/1] Cythonizing hits/adapters_cython.pyx 2025-09-08T18:19:45,514 building 'adapters_cython' extension 2025-09-08T18:19:45,514 creating build/temp.linux-armv7l-cpython-313/hits 2025-09-08T18:19:45,515 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c hits/adapters_cython.c -o build/temp.linux-armv7l-cpython-313/hits/adapters_cython.o 2025-09-08T18:19:49,395 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/hits/adapters_cython.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/hits/adapters_cython.cpython-313-arm-linux-gnueabihf.so 2025-09-08T18:19:49,848 Compiling hits/fastq_cython.pyx because it changed. 2025-09-08T18:19:49,848 [1/1] Cythonizing hits/fastq_cython.pyx 2025-09-08T18:19:52,573 building 'fastq_cython' extension 2025-09-08T18:19:52,574 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c hits/fastq_cython.c -o build/temp.linux-armv7l-cpython-313/hits/fastq_cython.o 2025-09-08T18:19:53,185 hits/fastq_cython.c: In function ‘__pyx_pf_12fastq_cython_2process_read’: 2025-09-08T18:19:53,202 hits/fastq_cython.c:18406:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2025-09-08T18:19:53,202 18406 | __pyx_t_7 = (__pyx_v_q >= __pyx_v_min_q); 2025-09-08T18:19:53,202 | ^~ 2025-09-08T18:19:53,209 hits/fastq_cython.c: In function ‘__pyx_pf_12fastq_cython_4process_Alignment’: 2025-09-08T18:19:53,226 hits/fastq_cython.c:18710:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 2025-09-08T18:19:53,226 18710 | __pyx_t_7 = (__pyx_v_q >= __pyx_v_min_q); 2025-09-08T18:19:53,226 | ^~ 2025-09-08T18:20:11,882 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/hits/fastq_cython.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/hits/fastq_cython.cpython-313-arm-linux-gnueabihf.so 2025-09-08T18:20:12,030 Compiling hits/sw_cython.pyx because it changed. 2025-09-08T18:20:12,030 [1/1] Cythonizing hits/sw_cython.pyx 2025-09-08T18:20:14,114 building 'sw_cython' extension 2025-09-08T18:20:14,114 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c hits/sw_cython.c -o build/temp.linux-armv7l-cpython-313/hits/sw_cython.o 2025-09-08T18:20:14,706 hits/sw_cython.c: In function ‘__pyx_pf_9sw_cython_generate_matrices’: 2025-09-08T18:20:14,723 hits/sw_cython.c:17225:35: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2025-09-08T18:20:14,723 17225 | for (__pyx_t_9 = 1; __pyx_t_9 < __pyx_t_1; __pyx_t_9+=1) { 2025-09-08T18:20:14,723 | ^ 2025-09-08T18:20:14,755 hits/sw_cython.c:17285:35: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2025-09-08T18:20:14,755 17285 | for (__pyx_t_9 = 1; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) { 2025-09-08T18:20:14,756 | ^ 2025-09-08T18:20:14,788 hits/sw_cython.c:17357:33: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2025-09-08T18:20:14,788 17357 | for (__pyx_t_9 = 1; __pyx_t_9 < __pyx_t_1; __pyx_t_9+=1) { 2025-09-08T18:20:14,788 | ^ 2025-09-08T18:20:14,805 hits/sw_cython.c:17370:37: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2025-09-08T18:20:14,805 17370 | for (__pyx_t_16 = 1; __pyx_t_16 < __pyx_t_14; __pyx_t_16+=1) { 2025-09-08T18:20:14,806 | ^ 2025-09-08T18:20:36,898 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/hits/sw_cython.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/hits/sw_cython.cpython-313-arm-linux-gnueabihf.so 2025-09-08T18:20:37,186 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-08T18:20:37,186 !! 2025-09-08T18:20:37,186 ******************************************************************************** 2025-09-08T18:20:37,186 Please avoid running ``setup.py`` directly. 2025-09-08T18:20:37,186 Instead, use pypa/build, pypa/installer or other 2025-09-08T18:20:37,187 standards-based tools. 2025-09-08T18:20:37,187 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-08T18:20:37,187 or your builds will no longer be supported. 2025-09-08T18:20:37,187 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-08T18:20:37,187 ******************************************************************************** 2025-09-08T18:20:37,187 !! 2025-09-08T18:20:37,188 self.initialize_options() 2025-09-08T18:20:37,260 installing to build/bdist.linux-armv7l/wheel 2025-09-08T18:20:37,260 running install 2025-09-08T18:20:37,282 running install_lib 2025-09-08T18:20:37,359 creating build/bdist.linux-armv7l/wheel 2025-09-08T18:20:37,360 creating build/bdist.linux-armv7l/wheel/hits 2025-09-08T18:20:37,360 copying build/lib.linux-armv7l-cpython-313/hits/sw_cython.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,364 copying build/lib.linux-armv7l-cpython-313/hits/fastq_cython.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,368 copying build/lib.linux-armv7l-cpython-313/hits/adapters_cython.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,369 creating build/bdist.linux-armv7l/wheel/hits/visualize 2025-09-08T18:20:37,370 creating build/bdist.linux-armv7l/wheel/hits/visualize/interactive 2025-09-08T18:20:37,370 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/example_df.txt -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,380 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/screen_search.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,381 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/screen_significance_filter.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,381 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/screen_errorbars_button.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,381 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/pc_box_select.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,382 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_save_button.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,382 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_case_sensitive.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,382 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_search.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,383 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/pc_selection.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,383 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/pc_clear.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,384 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_zoom_to_data.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,384 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_menu.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,384 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_range.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,385 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/screen_range.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,385 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_two_level_menu.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,385 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_label.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,386 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_annotation_button.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,386 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_grid.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,386 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_heatmap.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,387 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/screen_scatter_selection.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,387 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_cluster_button.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,387 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_selection.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,388 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_color.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,388 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_alpha.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,389 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_subset_menu.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,389 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_size.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,389 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_label_button.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,390 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/screen_menu.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,390 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/scatter_size_menu.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,390 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/pc_search.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,391 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/pc_hover.coffee -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,391 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/external_coffeescript.py -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,391 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/pc.py -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,392 copying build/lib.linux-armv7l-cpython-313/hits/visualize/interactive/__init__.py -> build/bdist.linux-armv7l/wheel/./hits/visualize/interactive 2025-09-08T18:20:37,392 copying build/lib.linux-armv7l-cpython-313/hits/visualize/__init__.py -> build/bdist.linux-armv7l/wheel/./hits/visualize 2025-09-08T18:20:37,393 copying build/lib.linux-armv7l-cpython-313/hits/visualize/fastq.py -> build/bdist.linux-armv7l/wheel/./hits/visualize 2025-09-08T18:20:37,393 copying build/lib.linux-armv7l-cpython-313/hits/visualize/gels.py -> build/bdist.linux-armv7l/wheel/./hits/visualize 2025-09-08T18:20:37,394 copying build/lib.linux-armv7l-cpython-313/hits/visualize/define_igv_colors.py -> build/bdist.linux-armv7l/wheel/./hits/visualize 2025-09-08T18:20:37,394 copying build/lib.linux-armv7l-cpython-313/hits/gff.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,394 copying build/lib.linux-armv7l-cpython-313/hits/utilities.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,395 copying build/lib.linux-armv7l-cpython-313/hits/paired_end.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,395 copying build/lib.linux-armv7l-cpython-313/hits/genomes.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,396 copying build/lib.linux-armv7l-cpython-313/hits/genetic_code.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,396 copying build/lib.linux-armv7l-cpython-313/hits/ipython.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,396 copying build/lib.linux-armv7l-cpython-313/hits/annotation.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,397 copying build/lib.linux-armv7l-cpython-313/hits/__init__.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,397 copying build/lib.linux-armv7l-cpython-313/hits/visualize_structure.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,397 copying build/lib.linux-armv7l-cpython-313/hits/intensities_illumina.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,398 copying build/lib.linux-armv7l-cpython-313/hits/variants.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,398 copying build/lib.linux-armv7l-cpython-313/hits/fasta.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,399 copying build/lib.linux-armv7l-cpython-313/hits/sam.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,399 copying build/lib.linux-armv7l-cpython-313/hits/mapping_tools.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,400 copying build/lib.linux-armv7l-cpython-313/hits/fastq.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,400 copying build/lib.linux-armv7l-cpython-313/hits/sw.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,400 copying build/lib.linux-armv7l-cpython-313/hits/interval.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,401 copying build/lib.linux-armv7l-cpython-313/hits/adapters.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,401 copying build/lib.linux-armv7l-cpython-313/hits/external_sort.py -> build/bdist.linux-armv7l/wheel/./hits 2025-09-08T18:20:37,402 running install_egg_info 2025-09-08T18:20:37,479 running egg_info 2025-09-08T18:20:37,552 writing hits.egg-info/PKG-INFO 2025-09-08T18:20:37,554 writing dependency_links to hits.egg-info/dependency_links.txt 2025-09-08T18:20:37,554 writing requirements to hits.egg-info/requires.txt 2025-09-08T18:20:37,555 writing top-level names to hits.egg-info/top_level.txt 2025-09-08T18:20:37,631 reading manifest file 'hits.egg-info/SOURCES.txt' 2025-09-08T18:20:37,640 writing manifest file 'hits.egg-info/SOURCES.txt' 2025-09-08T18:20:37,640 Copying hits.egg-info to build/bdist.linux-armv7l/wheel/./hits-0.0.2-py3.13.egg-info 2025-09-08T18:20:37,642 running install_scripts 2025-09-08T18:20:37,691 creating build/bdist.linux-armv7l/wheel/hits-0.0.2.dist-info/WHEEL 2025-09-08T18:20:37,692 creating '/tmp/pip-wheel-erqzr_20/hits-0.0.2-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-08T18:20:37,693 adding 'hits/__init__.py' 2025-09-08T18:20:37,694 adding 'hits/adapters.py' 2025-09-08T18:20:37,737 adding 'hits/adapters_cython.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T18:20:37,740 adding 'hits/annotation.py' 2025-09-08T18:20:37,740 adding 'hits/external_sort.py' 2025-09-08T18:20:37,741 adding 'hits/fasta.py' 2025-09-08T18:20:37,743 adding 'hits/fastq.py' 2025-09-08T18:20:37,939 adding 'hits/fastq_cython.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T18:20:37,946 adding 'hits/genetic_code.py' 2025-09-08T18:20:37,947 adding 'hits/genomes.py' 2025-09-08T18:20:37,948 adding 'hits/gff.py' 2025-09-08T18:20:37,949 adding 'hits/intensities_illumina.py' 2025-09-08T18:20:37,951 adding 'hits/interval.py' 2025-09-08T18:20:37,951 adding 'hits/ipython.py' 2025-09-08T18:20:37,954 adding 'hits/mapping_tools.py' 2025-09-08T18:20:37,956 adding 'hits/paired_end.py' 2025-09-08T18:20:37,963 adding 'hits/sam.py' 2025-09-08T18:20:37,966 adding 'hits/sw.py' 2025-09-08T18:20:38,191 adding 'hits/sw_cython.cpython-313-arm-linux-gnueabihf.so' 2025-09-08T18:20:38,199 adding 'hits/utilities.py' 2025-09-08T18:20:38,202 adding 'hits/variants.py' 2025-09-08T18:20:38,204 adding 'hits/visualize_structure.py' 2025-09-08T18:20:38,206 adding 'hits/visualize/__init__.py' 2025-09-08T18:20:38,207 adding 'hits/visualize/define_igv_colors.py' 2025-09-08T18:20:38,208 adding 'hits/visualize/fastq.py' 2025-09-08T18:20:38,210 adding 'hits/visualize/gels.py' 2025-09-08T18:20:38,215 adding 'hits/visualize/interactive/__init__.py' 2025-09-08T18:20:38,646 adding 'hits/visualize/interactive/example_df.txt' 2025-09-08T18:20:38,663 adding 'hits/visualize/interactive/external_coffeescript.py' 2025-09-08T18:20:38,664 adding 'hits/visualize/interactive/pc.py' 2025-09-08T18:20:38,665 adding 'hits/visualize/interactive/pc_box_select.coffee' 2025-09-08T18:20:38,666 adding 'hits/visualize/interactive/pc_clear.coffee' 2025-09-08T18:20:38,666 adding 'hits/visualize/interactive/pc_hover.coffee' 2025-09-08T18:20:38,667 adding 'hits/visualize/interactive/pc_search.coffee' 2025-09-08T18:20:38,668 adding 'hits/visualize/interactive/pc_selection.coffee' 2025-09-08T18:20:38,668 adding 'hits/visualize/interactive/scatter_alpha.coffee' 2025-09-08T18:20:38,669 adding 'hits/visualize/interactive/scatter_annotation_button.coffee' 2025-09-08T18:20:38,669 adding 'hits/visualize/interactive/scatter_case_sensitive.coffee' 2025-09-08T18:20:38,670 adding 'hits/visualize/interactive/scatter_cluster_button.coffee' 2025-09-08T18:20:38,670 adding 'hits/visualize/interactive/scatter_color.coffee' 2025-09-08T18:20:38,671 adding 'hits/visualize/interactive/scatter_grid.coffee' 2025-09-08T18:20:38,672 adding 'hits/visualize/interactive/scatter_heatmap.coffee' 2025-09-08T18:20:38,672 adding 'hits/visualize/interactive/scatter_label.coffee' 2025-09-08T18:20:38,673 adding 'hits/visualize/interactive/scatter_label_button.coffee' 2025-09-08T18:20:38,674 adding 'hits/visualize/interactive/scatter_menu.coffee' 2025-09-08T18:20:38,674 adding 'hits/visualize/interactive/scatter_range.coffee' 2025-09-08T18:20:38,675 adding 'hits/visualize/interactive/scatter_save_button.coffee' 2025-09-08T18:20:38,675 adding 'hits/visualize/interactive/scatter_search.coffee' 2025-09-08T18:20:38,676 adding 'hits/visualize/interactive/scatter_selection.coffee' 2025-09-08T18:20:38,677 adding 'hits/visualize/interactive/scatter_size.coffee' 2025-09-08T18:20:38,677 adding 'hits/visualize/interactive/scatter_size_menu.coffee' 2025-09-08T18:20:38,678 adding 'hits/visualize/interactive/scatter_subset_menu.coffee' 2025-09-08T18:20:38,678 adding 'hits/visualize/interactive/scatter_two_level_menu.coffee' 2025-09-08T18:20:38,679 adding 'hits/visualize/interactive/scatter_zoom_to_data.coffee' 2025-09-08T18:20:38,679 adding 'hits/visualize/interactive/screen_errorbars_button.coffee' 2025-09-08T18:20:38,680 adding 'hits/visualize/interactive/screen_menu.coffee' 2025-09-08T18:20:38,681 adding 'hits/visualize/interactive/screen_range.coffee' 2025-09-08T18:20:38,681 adding 'hits/visualize/interactive/screen_scatter_selection.coffee' 2025-09-08T18:20:38,682 adding 'hits/visualize/interactive/screen_search.coffee' 2025-09-08T18:20:38,682 adding 'hits/visualize/interactive/screen_significance_filter.coffee' 2025-09-08T18:20:38,683 adding 'hits-0.0.2.dist-info/METADATA' 2025-09-08T18:20:38,684 adding 'hits-0.0.2.dist-info/WHEEL' 2025-09-08T18:20:38,684 adding 'hits-0.0.2.dist-info/top_level.txt' 2025-09-08T18:20:38,685 adding 'hits-0.0.2.dist-info/RECORD' 2025-09-08T18:20:38,686 removing build/bdist.linux-armv7l/wheel 2025-09-08T18:20:39,298 Building wheel for hits (setup.py): finished with status 'done' 2025-09-08T18:20:39,321 Created wheel for hits: filename=hits-0.0.2-cp313-cp313-linux_armv7l.whl size=1987029 sha256=fbc2b6fdd6fe7ee2d31844af9937a99f6df5ac6e8faf888d29b0153102d60522 2025-09-08T18:20:39,322 Stored in directory: /tmp/pip-ephem-wheel-cache-3l04t00k/wheels/11/83/dd/88009ea9ef644f38c710e5091bc263d9368940cf1533225add 2025-09-08T18:20:39,330 Successfully built hits 2025-09-08T18:20:39,336 Removed build tracker: '/tmp/pip-build-tracker-o2nmskb6'