2025-09-08T22:16:29,515 Created temporary directory: /tmp/pip-build-tracker-tnl5sywo 2025-09-08T22:16:29,516 Initialized build tracking at /tmp/pip-build-tracker-tnl5sywo 2025-09-08T22:16:29,516 Created build tracker: /tmp/pip-build-tracker-tnl5sywo 2025-09-08T22:16:29,516 Entered build tracker: /tmp/pip-build-tracker-tnl5sywo 2025-09-08T22:16:29,516 Created temporary directory: /tmp/pip-wheel-0d8wug8p 2025-09-08T22:16:29,520 Created temporary directory: /tmp/pip-ephem-wheel-cache-tyhhxh34 2025-09-08T22:16:29,583 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-08T22:16:29,586 2 location(s) to search for versions of amlearn: 2025-09-08T22:16:29,586 * https://pypi.org/simple/amlearn/ 2025-09-08T22:16:29,586 * https://www.piwheels.org/simple/amlearn/ 2025-09-08T22:16:29,586 Fetching project page and analyzing links: https://pypi.org/simple/amlearn/ 2025-09-08T22:16:29,587 Getting page https://pypi.org/simple/amlearn/ 2025-09-08T22:16:29,588 Found index url https://pypi.org/simple/ 2025-09-08T22:16:29,670 Fetched page https://pypi.org/simple/amlearn/ as application/vnd.pypi.simple.v1+json 2025-09-08T22:16:29,672 Found link https://files.pythonhosted.org/packages/5b/37/b16f0e09d837e63766331f1e212eccd32b46da07fa38269be86c0908c613/amlearn-0.0.1rc1.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.0.1rc1 2025-09-08T22:16:29,672 Found link https://files.pythonhosted.org/packages/c9/69/69f3bd8acf04b6af467a52a212de838bf9cc412724b0197b1523b8703808/amlearn-0.1.0.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.1.0 2025-09-08T22:16:29,673 Found link https://files.pythonhosted.org/packages/d8/26/d78c59d9be85d65e5fae532c317c98f8dc8184831f66a0ae50fc6099e23d/amlearn-0.2.0.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.2.0 2025-09-08T22:16:29,673 Found link https://files.pythonhosted.org/packages/bb/91/5d7bc08da68c418d6a61ba40238d065acafeff63ecd5c802d6bff7790aba/amlearn-0.2.1.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.2.1 2025-09-08T22:16:29,673 Found link https://files.pythonhosted.org/packages/55/df/26e461638a88a71b48f07abfe48d5bd2e5c20bb3cf3967a8d2e18385a460/amlearn-0.2.2.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.2.2 2025-09-08T22:16:29,673 Found link https://files.pythonhosted.org/packages/80/8b/f29ae904d859e804eb774dd137d0ca7a549737754751446cca2973d301da/amlearn-0.2.3.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.2.3 2025-09-08T22:16:29,674 Found link https://files.pythonhosted.org/packages/6f/95/4f17c41fa8c92431ceecc63417552a0cacd918f6fd486fecd5da7c150624/amlearn-0.2.4.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.2.4 2025-09-08T22:16:29,674 Found link https://files.pythonhosted.org/packages/34/b3/b65030f870412ef8adb550da9e3e58e794b61ba08d7bf61920f8448e9a06/amlearn-0.2.5.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.2.5 2025-09-08T22:16:29,674 Found link https://files.pythonhosted.org/packages/a5/48/c9242309cea218dd4cccf08cf25320987703b250691f37dc69b5078e0069/amlearn-0.2.6.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.2.6 2025-09-08T22:16:29,674 Found link https://files.pythonhosted.org/packages/9b/3a/482db82334f7cef1d3d61de69919813a75396692267a1d277378fff90b15/amlearn-0.3.1.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.3.1 2025-09-08T22:16:29,675 Found link https://files.pythonhosted.org/packages/72/50/8891e4d0dc140c1e7b362e8045c01b8e86415bcb951e701e974776f4dc94/amlearn-0.3.2.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.3.2 2025-09-08T22:16:29,675 Found link https://files.pythonhosted.org/packages/e2/26/2df8cbc6aa583a9f7196ebe4bf76b969260a39c0dd91cd1961b67d0ae984/amlearn-0.3.3.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.3.3 2025-09-08T22:16:29,675 Found link https://files.pythonhosted.org/packages/80/95/ed6fd2b47ba6b38590fa63a50fbdd07945f8d234c4e32f2f0a3558fd27b9/amlearn-0.3.4.tar.gz (from https://pypi.org/simple/amlearn/), version: 0.3.4 2025-09-08T22:16:29,676 Fetching project page and analyzing links: https://www.piwheels.org/simple/amlearn/ 2025-09-08T22:16:29,676 Getting page https://www.piwheels.org/simple/amlearn/ 2025-09-08T22:16:29,677 Found index url https://www.piwheels.org/simple/ 2025-09-08T22:16:29,775 Fetched page https://www.piwheels.org/simple/amlearn/ as text/html 2025-09-08T22:16:29,776 Skipping link: not a file: https://www.piwheels.org/simple/amlearn/ 2025-09-08T22:16:29,777 Skipping link: not a file: https://pypi.org/simple/amlearn/ 2025-09-08T22:16:29,804 Given no hashes to check 1 links for project 'amlearn': discarding no candidates 2025-09-08T22:16:29,806 Collecting amlearn==0.3.1 2025-09-08T22:16:29,807 Created temporary directory: /tmp/pip-unpack-a9k65pfu 2025-09-08T22:16:30,020 Downloading amlearn-0.3.1.tar.gz (84 kB) 2025-09-08T22:16:30,106 Added amlearn==0.3.1 from https://files.pythonhosted.org/packages/9b/3a/482db82334f7cef1d3d61de69919813a75396692267a1d277378fff90b15/amlearn-0.3.1.tar.gz to build tracker '/tmp/pip-build-tracker-tnl5sywo' 2025-09-08T22:16:30,107 Running setup.py (path:/tmp/pip-wheel-0d8wug8p/amlearn_6139630906be4eb69585d8dde92250e9/setup.py) egg_info for package amlearn 2025-09-08T22:16:30,108 Created temporary directory: /tmp/pip-pip-egg-info-lnoay2uu 2025-09-08T22:16:30,108 Preparing metadata (setup.py): started 2025-09-08T22:16:30,109 Running command python setup.py egg_info 2025-09-08T22:16:30,921 Traceback (most recent call last): 2025-09-08T22:16:30,922 File "/tmp/pip-wheel-0d8wug8p/amlearn_6139630906be4eb69585d8dde92250e9/setup.py", line 8, in 2025-09-08T22:16:30,922 from numpy.distutils.core import Extension, setup 2025-09-08T22:16:30,922 ModuleNotFoundError: No module named 'numpy.distutils' 2025-09-08T22:16:30,923 During handling of the above exception, another exception occurred: 2025-09-08T22:16:30,923 Traceback (most recent call last): 2025-09-08T22:16:30,924 File "", line 2, in 2025-09-08T22:16:30,924 exec(compile(''' 2025-09-08T22:16:30,924 ~~~~^^^^^^^^^^^^ 2025-09-08T22:16:30,925 # This is -- a caller that pip uses to run setup.py 2025-09-08T22:16:30,925 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:30,925 ...<32 lines>... 2025-09-08T22:16:30,925 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T22:16:30,925 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:30,925 ''' % ('/tmp/pip-wheel-0d8wug8p/amlearn_6139630906be4eb69585d8dde92250e9/setup.py',), "", "exec")) 2025-09-08T22:16:30,926 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:30,926 File "", line 35, in 2025-09-08T22:16:30,926 File "/tmp/pip-wheel-0d8wug8p/amlearn_6139630906be4eb69585d8dde92250e9/setup.py", line 16, in 2025-09-08T22:16:30,926 raise RuntimeError(msg) 2025-09-08T22:16:30,926 RuntimeError: Please install numpy (version 1.7.0 or greater) before installing Amlearn. Because Amlearn uses numpy's f2py to compile the fortran modules to speed up the calculation of featurizer. like: $ conda install numpy $ pip install numpy 2025-09-08T22:16:31,058 ERROR: python setup.py egg_info exited with 1 2025-09-08T22:16:31,071 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-08T22:16:31,071 exec(compile('"'"''"'"''"'"' 2025-09-08T22:16:31,071 # This is -- a caller that pip uses to run setup.py 2025-09-08T22:16:31,071 # 2025-09-08T22:16:31,071 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-08T22:16:31,071 # import from `distutils.core` to work with newer packaging standards. 2025-09-08T22:16:31,071 # - It provides a clear error message when setuptools is not installed. 2025-09-08T22:16:31,071 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-08T22:16:31,071 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-08T22:16:31,071 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-08T22:16:31,071 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-08T22:16:31,071 import os, sys, tokenize, traceback 2025-09-08T22:16:31,071 2025-09-08T22:16:31,071 try: 2025-09-08T22:16:31,071 import setuptools 2025-09-08T22:16:31,071 except ImportError: 2025-09-08T22:16:31,071 print( 2025-09-08T22:16:31,071 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-08T22:16:31,071 "the build environment with exception:", 2025-09-08T22:16:31,071 file=sys.stderr, 2025-09-08T22:16:31,071 ) 2025-09-08T22:16:31,071 traceback.print_exc() 2025-09-08T22:16:31,071 sys.exit(1) 2025-09-08T22:16:31,071 2025-09-08T22:16:31,071 __file__ = %r 2025-09-08T22:16:31,071 sys.argv[0] = __file__ 2025-09-08T22:16:31,071 2025-09-08T22:16:31,071 if os.path.exists(__file__): 2025-09-08T22:16:31,071 filename = __file__ 2025-09-08T22:16:31,071 with tokenize.open(__file__) as f: 2025-09-08T22:16:31,071 setup_py_code = f.read() 2025-09-08T22:16:31,071 else: 2025-09-08T22:16:31,071 filename = "" 2025-09-08T22:16:31,071 setup_py_code = "from setuptools import setup; setup()" 2025-09-08T22:16:31,071 2025-09-08T22:16:31,071 exec(compile(setup_py_code, filename, "exec")) 2025-09-08T22:16:31,071 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-0d8wug8p/amlearn_6139630906be4eb69585d8dde92250e9/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-lnoay2uu[/] 2025-09-08T22:16:31,071 [bold magenta]cwd[/]: /tmp/pip-wheel-0d8wug8p/amlearn_6139630906be4eb69585d8dde92250e9/ 2025-09-08T22:16:31,071 Preparing metadata (setup.py): finished with status 'error' 2025-09-08T22:16:31,072 ERROR: metadata generation failed 2025-09-08T22:16:31,078 Exception information: 2025-09-08T22:16:31,078 Traceback (most recent call last): 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-08T22:16:31,078 call_subprocess( 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~^ 2025-09-08T22:16:31,078 args, 2025-09-08T22:16:31,078 ^^^^^ 2025-09-08T22:16:31,078 ...<2 lines>... 2025-09-08T22:16:31,078 spinner=spinner, 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 ) 2025-09-08T22:16:31,078 ^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-08T22:16:31,078 raise error 2025-09-08T22:16:31,078 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-08T22:16:31,078 2025-09-08T22:16:31,078 The above exception was the direct cause of the following exception: 2025-09-08T22:16:31,078 2025-09-08T22:16:31,078 Traceback (most recent call last): 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-08T22:16:31,078 status = _inner_run() 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-08T22:16:31,078 return self.run(options, args) 2025-09-08T22:16:31,078 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-08T22:16:31,078 return func(self, options, args) 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-08T22:16:31,078 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-08T22:16:31,078 result = self._result = resolver.resolve( 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~^ 2025-09-08T22:16:31,078 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 ) 2025-09-08T22:16:31,078 ^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-08T22:16:31,078 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-08T22:16:31,078 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-08T22:16:31,078 if not criterion.candidates: 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-08T22:16:31,078 return bool(self._sequence) 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-08T22:16:31,078 self._bool = any(self) 2025-09-08T22:16:31,078 ~~~^^^^^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-08T22:16:31,078 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-08T22:16:31,078 ^^^^^^^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-08T22:16:31,078 candidate = func() 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-08T22:16:31,078 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T22:16:31,078 link, template, name, version 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 ) 2025-09-08T22:16:31,078 ^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-08T22:16:31,078 self._link_candidate_cache[link] = LinkCandidate( 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~^ 2025-09-08T22:16:31,078 link, 2025-09-08T22:16:31,078 ^^^^^ 2025-09-08T22:16:31,078 ...<3 lines>... 2025-09-08T22:16:31,078 version=version, 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 ) 2025-09-08T22:16:31,078 ^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-08T22:16:31,078 super().__init__( 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~^ 2025-09-08T22:16:31,078 link=link, 2025-09-08T22:16:31,078 ^^^^^^^^^^ 2025-09-08T22:16:31,078 ...<4 lines>... 2025-09-08T22:16:31,078 version=version, 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 ) 2025-09-08T22:16:31,078 ^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-08T22:16:31,078 self.dist = self._prepare() 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-08T22:16:31,078 dist = self._prepare_distribution() 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-08T22:16:31,078 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-08T22:16:31,078 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-08T22:16:31,078 dist = _get_prepared_distribution( 2025-09-08T22:16:31,078 req, 2025-09-08T22:16:31,078 ...<3 lines>... 2025-09-08T22:16:31,078 self.check_build_deps, 2025-09-08T22:16:31,078 ) 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-08T22:16:31,078 abstract_dist.prepare_distribution_metadata( 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T22:16:31,078 finder, build_isolation, check_build_deps 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 ) 2025-09-08T22:16:31,078 ^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-08T22:16:31,078 self.req.prepare_metadata() 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-08T22:16:31,078 self.metadata_directory = generate_metadata_legacy( 2025-09-08T22:16:31,078 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-08T22:16:31,078 build_env=self.build_env, 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 ...<3 lines>... 2025-09-08T22:16:31,078 details=details, 2025-09-08T22:16:31,078 ^^^^^^^^^^^^^^^^ 2025-09-08T22:16:31,078 ) 2025-09-08T22:16:31,078 ^ 2025-09-08T22:16:31,078 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-08T22:16:31,078 raise MetadataGenerationFailed(package_details=details) from error 2025-09-08T22:16:31,078 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-08T22:16:31,102 Removed amlearn==0.3.1 from https://files.pythonhosted.org/packages/9b/3a/482db82334f7cef1d3d61de69919813a75396692267a1d277378fff90b15/amlearn-0.3.1.tar.gz from build tracker '/tmp/pip-build-tracker-tnl5sywo' 2025-09-08T22:16:31,102 Removed build tracker: '/tmp/pip-build-tracker-tnl5sywo'