2025-09-09T01:08:36,904 Created temporary directory: /tmp/pip-build-tracker-rlhs_dvy 2025-09-09T01:08:36,904 Initialized build tracking at /tmp/pip-build-tracker-rlhs_dvy 2025-09-09T01:08:36,904 Created build tracker: /tmp/pip-build-tracker-rlhs_dvy 2025-09-09T01:08:36,905 Entered build tracker: /tmp/pip-build-tracker-rlhs_dvy 2025-09-09T01:08:36,905 Created temporary directory: /tmp/pip-wheel-whzel2s5 2025-09-09T01:08:36,908 Created temporary directory: /tmp/pip-ephem-wheel-cache-jc6uub7u 2025-09-09T01:08:36,968 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-09T01:08:36,970 2 location(s) to search for versions of gevo: 2025-09-09T01:08:36,970 * https://pypi.org/simple/gevo/ 2025-09-09T01:08:36,970 * https://www.piwheels.org/simple/gevo/ 2025-09-09T01:08:36,971 Fetching project page and analyzing links: https://pypi.org/simple/gevo/ 2025-09-09T01:08:36,971 Getting page https://pypi.org/simple/gevo/ 2025-09-09T01:08:36,972 Found index url https://pypi.org/simple/ 2025-09-09T01:08:37,043 Fetched page https://pypi.org/simple/gevo/ as application/vnd.pypi.simple.v1+json 2025-09-09T01:08:37,047 Found link https://files.pythonhosted.org/packages/6b/30/d0f0a6c0a80358e29330e39de0fb248aa20767e16bc3f4408abf0e73b1bd/gevo-1.0.0.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.5), version: 1.0.0 2025-09-09T01:08:37,048 Found link https://files.pythonhosted.org/packages/2e/d2/7db209c56623eaeb9b5a5ab3b2f9074b096b0b360e396a273b0730791992/gevo-1.0.1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.5), version: 1.0.1 2025-09-09T01:08:37,048 Found link https://files.pythonhosted.org/packages/7b/ae/e8d2b405972e048b2a4392e144e4a39f964670e6d1e9605d5106bd4357c0/gevo-1.1.1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.1.1 2025-09-09T01:08:37,048 Found link https://files.pythonhosted.org/packages/3c/21/8c821765fad3e20eabf3971adba90dde56387f5e6762497918951146e71e/gevo-1.2.0-1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.0-1 2025-09-09T01:08:37,049 Found link https://files.pythonhosted.org/packages/0a/76/37d493d114e8e02fe076b26a13c57b21317f7f506f15bec954fc27d1b206/gevo-1.2.1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.1 2025-09-09T01:08:37,049 Found link https://files.pythonhosted.org/packages/53/61/9612f339be59e0522e7343cdb59dc7da77fbb8ea501fcccbcd1718947b0a/gevo-1.2.2.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.2 2025-09-09T01:08:37,049 Found link https://files.pythonhosted.org/packages/dc/71/f3ec8ea72d7b3d2b17d5a9dda0b294b162cd4ff596f78da69d781b4ca0fe/gevo-1.2.3.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.3 2025-09-09T01:08:37,049 Found link https://files.pythonhosted.org/packages/f8/12/49cd544a99d9cc1cfb72ddd644e6b379159650ff968dfea3751959cd6455/gevo-1.2.4.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.4 2025-09-09T01:08:37,050 Found link https://files.pythonhosted.org/packages/e8/71/b8c5508beb1403632e08c96ed12af6d9b1b554fc8822fb00510e013e45fc/gevo-1.2.4.post1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.4.post1 2025-09-09T01:08:37,050 Found link https://files.pythonhosted.org/packages/57/2e/b382b477bc896b7e80663440ad2e2a558cfdd52ee49f90eb94345cce43f0/gevo-1.2.5.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.5 2025-09-09T01:08:37,050 Found link https://files.pythonhosted.org/packages/41/9b/0654b52d3969dcd399cb532fcbf6e1a3d9b2e15100c8c0e8e99b0de96f76/gevo-1.2.6.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.2.6 2025-09-09T01:08:37,050 Found link https://files.pythonhosted.org/packages/55/74/fe6a626e653619c34b15766080cc59e3341b203dcc735380389e08fe5873/gevo-1.3.0.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.0 2025-09-09T01:08:37,050 Found link https://files.pythonhosted.org/packages/53/6c/708394f01f6384420bfe40d88a927bb62e434f81c332a23f5df1d1a95f90/gevo-1.3.0.post1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.0.post1 2025-09-09T01:08:37,051 Found link https://files.pythonhosted.org/packages/bb/28/cdd413d87c08475340eefcbfcdb1f5e2039e62dae860032a8130e45ae888/gevo-1.3.1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.1 2025-09-09T01:08:37,051 Found link https://files.pythonhosted.org/packages/1f/ef/6558f602e2de69c171457705a856a33c98100eb899b2ad78dfa15b272ced/gevo-1.3.1.post1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.1.post1 2025-09-09T01:08:37,051 Found link https://files.pythonhosted.org/packages/ae/b8/766c761cb57b3cdf75dbf18c3318a04ec71fcfe4788672132a4342ed46c6/gevo-1.3.1.post2.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.1.post2 2025-09-09T01:08:37,051 Found link https://files.pythonhosted.org/packages/eb/b0/00df773ffb3d9de10b350695d3f046b0ace8953868c06c93dafed078cd3d/gevo-1.3.2.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.2 2025-09-09T01:08:37,052 Found link https://files.pythonhosted.org/packages/d2/07/eae33504b264ce258a1f3394d83323c0cbeaaf1a85bafb8fbabb26b421e2/gevo-1.3.3.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.3 2025-09-09T01:08:37,052 Found link https://files.pythonhosted.org/packages/34/4f/722b8732805395fd96b1c880a5e2d561e38a6602d939a776efe206d9056a/gevo-1.3.4.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.4 2025-09-09T01:08:37,052 Found link https://files.pythonhosted.org/packages/72/27/523f2f3a1f1aea28dd942500ada2baceaaa21d1c456fcd64aa6dca0527a3/gevo-1.3.4.post1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.3.4.post1 2025-09-09T01:08:37,052 Found link https://files.pythonhosted.org/packages/64/2f/db8a673fd34bb989f0131dbdb39fbfb27471e48ecbbe30521b697a3d6331/gevo-1.4.0.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.4.0 2025-09-09T01:08:37,053 Found link https://files.pythonhosted.org/packages/f4/00/c7a06b600bef4e0a7feeb5e9f0fcb9ef2d2dcf865189f7000020a0d69c8c/gevo-1.4.0.post1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.4.0.post1 2025-09-09T01:08:37,053 Found link https://files.pythonhosted.org/packages/22/78/6949362eb5f36fb15ae87966d740d300534a6ef10ec82c60645029051d13/gevo-1.5.0.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.5.0 2025-09-09T01:08:37,053 Found link https://files.pythonhosted.org/packages/a4/f5/d2a79d6f7360be18047fb0decfa4b55491eab1db4a6e1f75ecb21e901dbf/gevo-1.5.1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.5.1 2025-09-09T01:08:37,053 Found link https://files.pythonhosted.org/packages/70/0f/dfed080dfcf2213f6de51e023894ac817443fed7e089070c27ab98a51ba7/gevo-1.6.0.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.6.0 2025-09-09T01:08:37,053 Found link https://files.pythonhosted.org/packages/68/d6/1c6f4823aad7a0f23f1775286d51b33a7b995da6bf5da5fb33abb29c8f7d/gevo-1.6.0.post1.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.6.0.post1 2025-09-09T01:08:37,054 Found link https://files.pythonhosted.org/packages/12/59/f5e13cabb4f4a68675de1d059400171d3c217c7e75791e88a9ade413b7b1/gevo-1.6.2.tar.gz (from https://pypi.org/simple/gevo/) (requires-python:>=3.6.1), version: 1.6.2 2025-09-09T01:08:37,054 Fetching project page and analyzing links: https://www.piwheels.org/simple/gevo/ 2025-09-09T01:08:37,054 Getting page https://www.piwheels.org/simple/gevo/ 2025-09-09T01:08:37,055 Found index url https://www.piwheels.org/simple/ 2025-09-09T01:08:37,147 Fetched page https://www.piwheels.org/simple/gevo/ as text/html 2025-09-09T01:08:37,152 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.2.1-cp39-cp39-linux_armv6l.whl#sha256=a0218b30db4c0f334f6a31e367e4522661e05853a303594b02272098c0edd6fc (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.6.1) 2025-09-09T01:08:37,152 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.2.1-cp39-cp39-linux_armv7l.whl#sha256=a0218b30db4c0f334f6a31e367e4522661e05853a303594b02272098c0edd6fc (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.6.1) 2025-09-09T01:08:37,153 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=5050664090f16925d50811df97c192d04d6941fe5c69645da40d71f5123d07b6 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,153 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=5050664090f16925d50811df97c192d04d6941fe5c69645da40d71f5123d07b6 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,153 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=b9152856ef6adbcce7d274b081d77adb7342be34cf15f5292b1911884fd62092 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,153 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=b9152856ef6adbcce7d274b081d77adb7342be34cf15f5292b1911884fd62092 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,153 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=9b67c7fef769da37d269d508b1bea9fe92d25f4af422b2873f78b56b2bd43f00 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,154 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=9b67c7fef769da37d269d508b1bea9fe92d25f4af422b2873f78b56b2bd43f00 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,154 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=56eda4fa68b283430087b3512ced4963f02bb40180b1c5fb5effe8e3bb15b538 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,154 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=56eda4fa68b283430087b3512ced4963f02bb40180b1c5fb5effe8e3bb15b538 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,154 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=2ffae14b8ad48c285f235a7661681ee1c2590c617880d60fced696eb6f12fa67 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,154 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=2ffae14b8ad48c285f235a7661681ee1c2590c617880d60fced696eb6f12fa67 (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,154 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=53af0b15678d9501928ecf281aa19e62d3aacf5eb11ecd48e8b0263b749f699e (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,154 Skipping link: No binaries permitted for gevo: https://archive1.piwheels.org/simple/gevo/gevo-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=53af0b15678d9501928ecf281aa19e62d3aacf5eb11ecd48e8b0263b749f699e (from https://www.piwheels.org/simple/gevo/) (requires-python:>=3.5) 2025-09-09T01:08:37,155 Skipping link: not a file: https://www.piwheels.org/simple/gevo/ 2025-09-09T01:08:37,155 Skipping link: not a file: https://pypi.org/simple/gevo/ 2025-09-09T01:08:37,182 Given no hashes to check 1 links for project 'gevo': discarding no candidates 2025-09-09T01:08:37,183 Collecting gevo==1.0.1 2025-09-09T01:08:37,184 Created temporary directory: /tmp/pip-unpack-2aoyyrw2 2025-09-09T01:08:37,320 Downloading gevo-1.0.1.tar.gz (15 kB) 2025-09-09T01:08:37,352 Added gevo==1.0.1 from https://files.pythonhosted.org/packages/2e/d2/7db209c56623eaeb9b5a5ab3b2f9074b096b0b360e396a273b0730791992/gevo-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-rlhs_dvy' 2025-09-09T01:08:37,353 Running setup.py (path:/tmp/pip-wheel-whzel2s5/gevo_dd08b787cff8437abd0a38176299a8a1/setup.py) egg_info for package gevo 2025-09-09T01:08:37,353 Created temporary directory: /tmp/pip-pip-egg-info-8yugwq42 2025-09-09T01:08:37,353 Preparing metadata (setup.py): started 2025-09-09T01:08:37,354 Running command python setup.py egg_info 2025-09-09T01:08:38,444 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-09T01:08:38,445 !! 2025-09-09T01:08:38,445 ******************************************************************************** 2025-09-09T01:08:38,445 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-09T01:08:38,445 License :: OSI Approved :: MIT License 2025-09-09T01:08:38,445 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-09T01:08:38,445 ******************************************************************************** 2025-09-09T01:08:38,446 !! 2025-09-09T01:08:38,446 self._finalize_license_expression() 2025-09-09T01:08:38,519 running egg_info 2025-09-09T01:08:38,593 creating /tmp/pip-pip-egg-info-8yugwq42/gevo.egg-info 2025-09-09T01:08:38,593 writing /tmp/pip-pip-egg-info-8yugwq42/gevo.egg-info/PKG-INFO 2025-09-09T01:08:38,595 writing dependency_links to /tmp/pip-pip-egg-info-8yugwq42/gevo.egg-info/dependency_links.txt 2025-09-09T01:08:38,595 writing requirements to /tmp/pip-pip-egg-info-8yugwq42/gevo.egg-info/requires.txt 2025-09-09T01:08:38,596 writing top-level names to /tmp/pip-pip-egg-info-8yugwq42/gevo.egg-info/top_level.txt 2025-09-09T01:08:38,596 writing manifest file '/tmp/pip-pip-egg-info-8yugwq42/gevo.egg-info/SOURCES.txt' 2025-09-09T01:08:38,900 reading manifest file '/tmp/pip-pip-egg-info-8yugwq42/gevo.egg-info/SOURCES.txt' 2025-09-09T01:08:38,904 writing manifest file '/tmp/pip-pip-egg-info-8yugwq42/gevo.egg-info/SOURCES.txt' 2025-09-09T01:08:39,019 Preparing metadata (setup.py): finished with status 'done' 2025-09-09T01:08:39,023 Source in /tmp/pip-wheel-whzel2s5/gevo_dd08b787cff8437abd0a38176299a8a1 has version 1.0.1, which satisfies requirement gevo==1.0.1 from https://files.pythonhosted.org/packages/2e/d2/7db209c56623eaeb9b5a5ab3b2f9074b096b0b360e396a273b0730791992/gevo-1.0.1.tar.gz 2025-09-09T01:08:39,024 Removed gevo==1.0.1 from https://files.pythonhosted.org/packages/2e/d2/7db209c56623eaeb9b5a5ab3b2f9074b096b0b360e396a273b0730791992/gevo-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-rlhs_dvy' 2025-09-09T01:08:39,029 Created temporary directory: /tmp/pip-unpack-f44jebyx 2025-09-09T01:08:39,029 Created temporary directory: /tmp/pip-unpack-ftijpk7t 2025-09-09T01:08:39,029 Building wheels for collected packages: gevo 2025-09-09T01:08:39,030 Created temporary directory: /tmp/pip-wheel-wudzd2zn 2025-09-09T01:08:39,031 DEPRECATION: Building 'gevo' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'gevo'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-09T01:08:39,032 Building wheel for gevo (setup.py): started 2025-09-09T01:08:39,033 Destination directory: /tmp/pip-wheel-wudzd2zn 2025-09-09T01:08:39,033 Running command python setup.py bdist_wheel 2025-09-09T01:08:40,101 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-09T01:08:40,101 !! 2025-09-09T01:08:40,102 ******************************************************************************** 2025-09-09T01:08:40,102 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-09T01:08:40,102 License :: OSI Approved :: MIT License 2025-09-09T01:08:40,102 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-09T01:08:40,102 ******************************************************************************** 2025-09-09T01:08:40,103 !! 2025-09-09T01:08:40,103 self._finalize_license_expression() 2025-09-09T01:08:40,103 running bdist_wheel 2025-09-09T01:08:40,400 running build 2025-09-09T01:08:40,400 running build_py 2025-09-09T01:08:40,477 creating build/lib.linux-armv7l-cpython-313/gevo 2025-09-09T01:08:40,478 copying gevo/irind.py -> build/lib.linux-armv7l-cpython-313/gevo 2025-09-09T01:08:40,478 copying gevo/evolve.py -> build/lib.linux-armv7l-cpython-313/gevo 2025-09-09T01:08:40,479 copying gevo/__init__.py -> build/lib.linux-armv7l-cpython-313/gevo 2025-09-09T01:08:40,480 running build_ext 2025-09-09T01:08:40,488 creating tmp 2025-09-09T01:08:40,488 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c /tmp/tmp7bjtgbkp.cpp -o tmp/tmp7bjtgbkp.o -std=c++11 2025-09-09T01:08:40,570 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c /tmp/tmp71qdmq4j.cpp -o tmp/tmp71qdmq4j.o -fvisibility=hidden 2025-09-09T01:08:41,007 building 'fuzzycompare' extension 2025-09-09T01:08:41,017 Traceback (most recent call last): 2025-09-09T01:08:41,027 File "", line 2, in 2025-09-09T01:08:41,027 exec(compile(''' 2025-09-09T01:08:41,027 ~~~~^^^^^^^^^^^^ 2025-09-09T01:08:41,027 # This is -- a caller that pip uses to run setup.py 2025-09-09T01:08:41,027 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T01:08:41,028 ...<32 lines>... 2025-09-09T01:08:41,028 exec(compile(setup_py_code, filename, "exec")) 2025-09-09T01:08:41,028 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T01:08:41,028 ''' % ('/tmp/pip-wheel-whzel2s5/gevo_dd08b787cff8437abd0a38176299a8a1/setup.py',), "", "exec")) 2025-09-09T01:08:41,028 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T01:08:41,028 File "", line 35, in 2025-09-09T01:08:41,028 File "/tmp/pip-wheel-whzel2s5/gevo_dd08b787cff8437abd0a38176299a8a1/setup.py", line 96, in 2025-09-09T01:08:41,029 setup( 2025-09-09T01:08:41,029 ~~~~~^ 2025-09-09T01:08:41,029 name='gevo', 2025-09-09T01:08:41,029 ^^^^^^^^^^^^ 2025-09-09T01:08:41,029 ...<32 lines>... 2025-09-09T01:08:41,029 ], 2025-09-09T01:08:41,029 ^^ 2025-09-09T01:08:41,029 ) 2025-09-09T01:08:41,029 ^ 2025-09-09T01:08:41,029 File "/usr/local/lib/python3.13/dist-packages/setuptools/__init__.py", line 115, in setup 2025-09-09T01:08:41,030 return distutils.core.setup(**attrs) 2025-09-09T01:08:41,030 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T01:08:41,030 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 186, in setup 2025-09-09T01:08:41,030 return run_commands(dist) 2025-09-09T01:08:41,030 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 202, in run_commands 2025-09-09T01:08:41,030 dist.run_commands() 2025-09-09T01:08:41,030 ~~~~~~~~~~~~~~~~~^^ 2025-09-09T01:08:41,030 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1002, in run_commands 2025-09-09T01:08:41,031 self.run_command(cmd) 2025-09-09T01:08:41,031 ~~~~~~~~~~~~~~~~^^^^^ 2025-09-09T01:08:41,031 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-09T01:08:41,031 super().run_command(command) 2025-09-09T01:08:41,031 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T01:08:41,031 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-09T01:08:41,031 cmd_obj.run() 2025-09-09T01:08:41,032 ~~~~~~~~~~~^^ 2025-09-09T01:08:41,032 File "/usr/local/lib/python3.13/dist-packages/setuptools/command/bdist_wheel.py", line 370, in run 2025-09-09T01:08:41,032 self.run_command("build") 2025-09-09T01:08:41,032 ~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T01:08:41,032 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command 2025-09-09T01:08:41,032 self.distribution.run_command(command) 2025-09-09T01:08:41,032 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T01:08:41,032 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-09T01:08:41,032 super().run_command(command) 2025-09-09T01:08:41,033 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T01:08:41,033 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-09T01:08:41,033 cmd_obj.run() 2025-09-09T01:08:41,033 ~~~~~~~~~~~^^ 2025-09-09T01:08:41,033 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build.py", line 135, in run 2025-09-09T01:08:41,033 self.run_command(cmd_name) 2025-09-09T01:08:41,033 ~~~~~~~~~~~~~~~~^^^^^^^^^^ 2025-09-09T01:08:41,033 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command 2025-09-09T01:08:41,034 self.distribution.run_command(command) 2025-09-09T01:08:41,034 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T01:08:41,034 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-09T01:08:41,034 super().run_command(command) 2025-09-09T01:08:41,034 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T01:08:41,034 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-09T01:08:41,034 cmd_obj.run() 2025-09-09T01:08:41,034 ~~~~~~~~~~~^^ 2025-09-09T01:08:41,035 File "/usr/local/lib/python3.13/dist-packages/setuptools/command/build_ext.py", line 96, in run 2025-09-09T01:08:41,035 _build_ext.run(self) 2025-09-09T01:08:41,035 ~~~~~~~~~~~~~~^^^^^^ 2025-09-09T01:08:41,035 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 368, in run 2025-09-09T01:08:41,035 self.build_extensions() 2025-09-09T01:08:41,035 ~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-09T01:08:41,035 File "/tmp/pip-wheel-whzel2s5/gevo_dd08b787cff8437abd0a38176299a8a1/setup.py", line 94, in build_extensions 2025-09-09T01:08:41,035 build_ext.build_extensions(self) 2025-09-09T01:08:41,035 ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^ 2025-09-09T01:08:41,036 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 484, in build_extensions 2025-09-09T01:08:41,036 self._build_extensions_serial() 2025-09-09T01:08:41,036 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-09T01:08:41,036 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 510, in _build_extensions_serial 2025-09-09T01:08:41,036 self.build_extension(ext) 2025-09-09T01:08:41,036 ~~~~~~~~~~~~~~~~~~~~^^^^^ 2025-09-09T01:08:41,036 File "/usr/local/lib/python3.13/dist-packages/setuptools/command/build_ext.py", line 261, in build_extension 2025-09-09T01:08:41,037 _build_ext.build_extension(self, ext) 2025-09-09T01:08:41,037 ~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ 2025-09-09T01:08:41,037 File "/usr/local/lib/python3.13/dist-packages/Cython/Distutils/build_ext.py", line 136, in build_extension 2025-09-09T01:08:41,037 super().build_extension(ext) 2025-09-09T01:08:41,037 ~~~~~~~~~~~~~~~~~~~~~~~^^^^^ 2025-09-09T01:08:41,037 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build_ext.py", line 565, in build_extension 2025-09-09T01:08:41,037 objects = self.compiler.compile( 2025-09-09T01:08:41,037 sources, 2025-09-09T01:08:41,037 ...<5 lines>... 2025-09-09T01:08:41,038 depends=ext.depends, 2025-09-09T01:08:41,038 ) 2025-09-09T01:08:41,038 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/compilers/C/base.py", line 645, in compile 2025-09-09T01:08:41,038 macros, objects, extra_postargs, pp_opts, build = self._setup_compile( 2025-09-09T01:08:41,038 ~~~~~~~~~~~~~~~~~~~^ 2025-09-09T01:08:41,038 output_dir, macros, include_dirs, sources, depends, extra_postargs 2025-09-09T01:08:41,038 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T01:08:41,038 ) 2025-09-09T01:08:41,039 ^ 2025-09-09T01:08:41,039 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/compilers/C/base.py", line 391, in _setup_compile 2025-09-09T01:08:41,039 pp_opts = gen_preprocess_options(macros, incdirs) 2025-09-09T01:08:41,039 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/compilers/C/base.py", line 1355, in gen_preprocess_options 2025-09-09T01:08:41,039 pp_opts.extend(f"-I{dir}" for dir in include_dirs) 2025-09-09T01:08:41,039 ~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T01:08:41,039 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/compilers/C/base.py", line 1355, in 2025-09-09T01:08:41,039 pp_opts.extend(f"-I{dir}" for dir in include_dirs) 2025-09-09T01:08:41,040 ^^^^^ 2025-09-09T01:08:41,040 File "/tmp/pip-wheel-whzel2s5/gevo_dd08b787cff8437abd0a38176299a8a1/setup.py", line 15, in __str__ 2025-09-09T01:08:41,040 import pybind11 2025-09-09T01:08:41,040 ModuleNotFoundError: No module named 'pybind11' 2025-09-09T01:08:41,175 ERROR: python setup.py bdist_wheel exited with 1 2025-09-09T01:08:41,186 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-09T01:08:41,186 exec(compile('"'"''"'"''"'"' 2025-09-09T01:08:41,186 # This is -- a caller that pip uses to run setup.py 2025-09-09T01:08:41,186 # 2025-09-09T01:08:41,186 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-09T01:08:41,186 # import from `distutils.core` to work with newer packaging standards. 2025-09-09T01:08:41,186 # - It provides a clear error message when setuptools is not installed. 2025-09-09T01:08:41,186 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-09T01:08:41,186 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-09T01:08:41,186 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-09T01:08:41,186 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-09T01:08:41,186 import os, sys, tokenize, traceback 2025-09-09T01:08:41,186 2025-09-09T01:08:41,186 try: 2025-09-09T01:08:41,186 import setuptools 2025-09-09T01:08:41,186 except ImportError: 2025-09-09T01:08:41,186 print( 2025-09-09T01:08:41,186 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-09T01:08:41,186 "the build environment with exception:", 2025-09-09T01:08:41,186 file=sys.stderr, 2025-09-09T01:08:41,186 ) 2025-09-09T01:08:41,186 traceback.print_exc() 2025-09-09T01:08:41,186 sys.exit(1) 2025-09-09T01:08:41,186 2025-09-09T01:08:41,186 __file__ = %r 2025-09-09T01:08:41,186 sys.argv[0] = __file__ 2025-09-09T01:08:41,186 2025-09-09T01:08:41,186 if os.path.exists(__file__): 2025-09-09T01:08:41,186 filename = __file__ 2025-09-09T01:08:41,186 with tokenize.open(__file__) as f: 2025-09-09T01:08:41,186 setup_py_code = f.read() 2025-09-09T01:08:41,186 else: 2025-09-09T01:08:41,186 filename = "" 2025-09-09T01:08:41,186 setup_py_code = "from setuptools import setup; setup()" 2025-09-09T01:08:41,186 2025-09-09T01:08:41,186 exec(compile(setup_py_code, filename, "exec")) 2025-09-09T01:08:41,186 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-whzel2s5/gevo_dd08b787cff8437abd0a38176299a8a1/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-wudzd2zn[/] 2025-09-09T01:08:41,187 [bold magenta]cwd[/]: /tmp/pip-wheel-whzel2s5/gevo_dd08b787cff8437abd0a38176299a8a1/ 2025-09-09T01:08:41,187 Building wheel for gevo (setup.py): finished with status 'error' 2025-09-09T01:08:41,187 ERROR: Failed building wheel for gevo 2025-09-09T01:08:41,188 Running setup.py clean for gevo 2025-09-09T01:08:41,189 Running command python setup.py clean 2025-09-09T01:08:42,267 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-09T01:08:42,268 !! 2025-09-09T01:08:42,268 ******************************************************************************** 2025-09-09T01:08:42,268 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-09T01:08:42,268 License :: OSI Approved :: MIT License 2025-09-09T01:08:42,268 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-09T01:08:42,269 ******************************************************************************** 2025-09-09T01:08:42,269 !! 2025-09-09T01:08:42,269 self._finalize_license_expression() 2025-09-09T01:08:42,345 running clean 2025-09-09T01:08:42,495 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-09T01:08:42,496 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-09T01:08:42,496 'build/scripts-3.13' does not exist -- can't clean it 2025-09-09T01:08:42,496 removing 'build' 2025-09-09T01:08:42,612 Failed to build gevo 2025-09-09T01:08:42,613 ERROR: Failed to build one or more wheels 2025-09-09T01:08:42,614 Exception information: 2025-09-09T01:08:42,614 Traceback (most recent call last): 2025-09-09T01:08:42,614 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-09T01:08:42,614 status = _inner_run() 2025-09-09T01:08:42,614 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-09T01:08:42,614 return self.run(options, args) 2025-09-09T01:08:42,614 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-09T01:08:42,614 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-09T01:08:42,614 return func(self, options, args) 2025-09-09T01:08:42,614 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-09T01:08:42,614 raise CommandError("Failed to build one or more wheels") 2025-09-09T01:08:42,614 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-09T01:08:42,618 Removed build tracker: '/tmp/pip-build-tracker-rlhs_dvy'