2025-09-09T22:27:29,945 Created temporary directory: /tmp/pip-build-tracker-hlahncdd
2025-09-09T22:27:29,946 Initialized build tracking at /tmp/pip-build-tracker-hlahncdd
2025-09-09T22:27:29,946 Created build tracker: /tmp/pip-build-tracker-hlahncdd
2025-09-09T22:27:29,946 Entered build tracker: /tmp/pip-build-tracker-hlahncdd
2025-09-09T22:27:29,946 Created temporary directory: /tmp/pip-wheel-umby9co4
2025-09-09T22:27:29,949 Created temporary directory: /tmp/pip-ephem-wheel-cache-84uyjhj3
2025-09-09T22:27:30,010 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-09-09T22:27:30,012 2 location(s) to search for versions of peptides:
2025-09-09T22:27:30,012 * https://pypi.org/simple/peptides/
2025-09-09T22:27:30,012 * https://www.piwheels.org/simple/peptides/
2025-09-09T22:27:30,013 Fetching project page and analyzing links: https://pypi.org/simple/peptides/
2025-09-09T22:27:30,013 Getting page https://pypi.org/simple/peptides/
2025-09-09T22:27:30,014 Found index url https://pypi.org/simple/
2025-09-09T22:27:30,175 Fetched page https://pypi.org/simple/peptides/ as application/vnd.pypi.simple.v1+json
2025-09-09T22:27:30,182   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/a6/0e/4dd0d71f5fd5ea7809ff2049da23958e941d7f76ae36864daec85124d2d9/peptides-0.1.0-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,183   Found link https://files.pythonhosted.org/packages/80/df/c741791a1174f6a8ce392b124f20d3387ab7550dd7dd2910bc91dea02043/peptides-0.1.0.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.1.0
2025-09-09T22:27:30,184   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/cd/31/ddafd8e7f4b55d732f381ea66663b57dc65c78f44ec43aed057ca2c2dc76/peptides-0.2.0-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,184   Found link https://files.pythonhosted.org/packages/7b/60/de964d499d99c0b9eb5b688a149491bfb51b75c16a5acbe9faedb58fe456/peptides-0.2.0.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.2.0
2025-09-09T22:27:30,185   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/f4/c8/0c7ca572c0462178fce957b5913abf119419bc5dc8f28ef39109cda3f1e4/peptides-0.2.1-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,185   Found link https://files.pythonhosted.org/packages/db/c9/f8043fac66d031b723c257d0c8b10bca56535a9beb9972f07e096c181a27/peptides-0.2.1.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.2.1
2025-09-09T22:27:30,186   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/91/63/8226ff18604dce95ff7a3ec749deba12f8555ca46169923577b7fe78c201/peptides-0.3.0-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,186   Found link https://files.pythonhosted.org/packages/d7/2d/8e6450016e9bbc1f433c054857b22513521f7d1e6a84af66c9a5df7123f6/peptides-0.3.0.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.3.0
2025-09-09T22:27:30,186   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/8a/a8/23262e1e39dc4c3624b04bcebb3ba4bb40f818ae32438048167dc7aa0bb6/peptides-0.3.1-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,187   Found link https://files.pythonhosted.org/packages/dd/04/f67d53cdd071ea25a13bf0bb9638ca4033b4bbbf8e1e30fe4e7652da12d1/peptides-0.3.1.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.3.1
2025-09-09T22:27:30,187   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/47/fa/3edf188b285dde06e0aea3d8c175e8dd4f7e302a5a39d65fd9195c48363f/peptides-0.3.2-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,187   Found link https://files.pythonhosted.org/packages/3c/0d/cc978e1a9129b235bc0282da0809c388c34f7ee9b3d7a419b90db6f3a224/peptides-0.3.2.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.3.2
2025-09-09T22:27:30,188   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/e1/03/9abefd8bdadcca5ca1aa1785d9b15c9e8d5f0ad9d78bb81043920501c384/peptides-0.3.3-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,188   Found link https://files.pythonhosted.org/packages/22/73/b8eede2ad2e6cb14db4c07de708091bf3911a4c4bca01a5fb1f2422e2c6f/peptides-0.3.3.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.3.3
2025-09-09T22:27:30,189   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/82/d6/c9bc4f19cee59eff0e8e8a3a10192f4d2ae44500b78a4d2f58e32a9c2f39/peptides-0.3.3.post1-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,189   Found link https://files.pythonhosted.org/packages/db/6e/11df5f10241d2b7d4b6981a126c35a8ed269f5d5008ec4e04255acd5eea7/peptides-0.3.3.post1.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.3.3.post1
2025-09-09T22:27:30,190   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/c4/ce/a4526cf3029462cd79ba87220bbd5ad3aba0927321a4d978a0e30f19032f/peptides-0.3.4-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,190   Found link https://files.pythonhosted.org/packages/c2/5a/871e514852764db28796d4b83bf327cfeab1211e400b2cdfa57cc5ee63d6/peptides-0.3.4.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.3.4
2025-09-09T22:27:30,190   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/58/79/f36b3f1c640286d772bbbfedcc67837c59f401095d0eb78825d82ab488a8/peptides-0.4.0-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,191   Found link https://files.pythonhosted.org/packages/9c/c8/7c84541a01c38016a93eeea110cfdd7ab50c0dfcd42ac89ec63ca0b75f37/peptides-0.4.0.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.4.0
2025-09-09T22:27:30,191   Skipping link: No binaries permitted for peptides: https://files.pythonhosted.org/packages/df/8a/a8657f7dd2a401718d81b815c6783fe7bdef34bb4b2013be6568bf2b5041/peptides-0.5.0-py3-none-any.whl (from https://pypi.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,191   Found link https://files.pythonhosted.org/packages/ee/db/27818c8a7917bb44c0f91df86ee95d9741502653da1c0fb68e260de8bc18/peptides-0.5.0.tar.gz (from https://pypi.org/simple/peptides/) (requires-python:>=3.6), version: 0.5.0
2025-09-09T22:27:30,192 Fetching project page and analyzing links: https://www.piwheels.org/simple/peptides/
2025-09-09T22:27:30,193 Getting page https://www.piwheels.org/simple/peptides/
2025-09-09T22:27:30,195 Found index url https://www.piwheels.org/simple/
2025-09-09T22:27:30,281 Fetched page https://www.piwheels.org/simple/peptides/ as text/html
2025-09-09T22:27:30,284   Skipping link: No binaries permitted for peptides: https://www.piwheels.org/simple/peptides/peptides-0.5.0-py3-none-any.whl#sha256=f37a5c0f1e1b4667e6f31483dc7252bcfd1b510cd7b87c2bdaf3b5ffbcc1c088 (from https://www.piwheels.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,284   Skipping link: No binaries permitted for peptides: https://archive1.piwheels.org/simple/peptides/peptides-0.4.0-py3-none-any.whl#sha256=0c9d24313ff40b67305b6e95dab499b7623d963bfbbc5a21afe44405fbd30ef4 (from https://www.piwheels.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,284   Skipping link: No binaries permitted for peptides: https://archive1.piwheels.org/simple/peptides/peptides-0.3.4-py3-none-any.whl#sha256=2e92c80cbd3d89cf62d453968167c3ca312c5558c6dd24abcc46e99c39f6e3de (from https://www.piwheels.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,284   Skipping link: No binaries permitted for peptides: https://archive1.piwheels.org/simple/peptides/peptides-0.3.3.post1-py3-none-any.whl#sha256=cd231addd5891755b3f96f8a13e33d6d9836c24eb7161777dedd78fb8021264b (from https://www.piwheels.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,284   Skipping link: No binaries permitted for peptides: https://archive1.piwheels.org/simple/peptides/peptides-0.3.3-py3-none-any.whl#sha256=424e14b396d0e3869b469fc91f4c0205cfb80d5aa8bdb3da1e1d47ee497f2bf7 (from https://www.piwheels.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,285   Skipping link: No binaries permitted for peptides: https://archive1.piwheels.org/simple/peptides/peptides-0.3.2-py3-none-any.whl#sha256=ea5c5fd052e7f29442e1f6599b5521e6bc8de30d34ca4e30f5e3fce0b5a1e171 (from https://www.piwheels.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,285   Skipping link: No binaries permitted for peptides: https://archive1.piwheels.org/simple/peptides/peptides-0.3.1-py3-none-any.whl#sha256=1f1da817bd95d574fe5a400ba6c60855b1604d1d6b03472a501950db468863b5 (from https://www.piwheels.org/simple/peptides/) (requires-python:>=3.6)
2025-09-09T22:27:30,285 Skipping link: not a file: https://www.piwheels.org/simple/peptides/
2025-09-09T22:27:30,285 Skipping link: not a file: https://pypi.org/simple/peptides/
2025-09-09T22:27:30,311 Given no hashes to check 1 links for project 'peptides': discarding no candidates
2025-09-09T22:27:30,312 Collecting peptides==0.1.0
2025-09-09T22:27:30,313   Created temporary directory: /tmp/pip-unpack-0b43bksx
2025-09-09T22:27:30,455   Downloading peptides-0.1.0.tar.gz (42 kB)
2025-09-09T22:27:30,574   Added peptides==0.1.0 from https://files.pythonhosted.org/packages/80/df/c741791a1174f6a8ce392b124f20d3387ab7550dd7dd2910bc91dea02043/peptides-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-hlahncdd'
2025-09-09T22:27:30,575   Running setup.py (path:/tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd/setup.py) egg_info for package peptides
2025-09-09T22:27:30,575   Created temporary directory: /tmp/pip-pip-egg-info-ue3xmwrl
2025-09-09T22:27:30,575   Preparing metadata (setup.py): started
2025-09-09T22:27:30,576   Running command python setup.py egg_info
2025-09-09T22:27:31,231   /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-09-09T22:27:31,231   !!

2025-09-09T22:27:31,232           ********************************************************************************
2025-09-09T22:27:31,232           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-09-09T22:27:31,232           License :: OSI Approved :: MIT License

2025-09-09T22:27:31,232           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-09-09T22:27:31,232           ********************************************************************************

2025-09-09T22:27:31,232   !!
2025-09-09T22:27:31,232     self._finalize_license_expression()
2025-09-09T22:27:31,251   /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2025-09-09T22:27:31,251   !!

2025-09-09T22:27:31,251           ********************************************************************************
2025-09-09T22:27:31,251           Requirements should be satisfied by a PEP 517 installer.
2025-09-09T22:27:31,251           If you are using pip, you can try `pip install --use-pep517`.

2025-09-09T22:27:31,251           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-09-09T22:27:31,251           or your builds will no longer be supported.
2025-09-09T22:27:31,252           ********************************************************************************

2025-09-09T22:27:31,252   !!
2025-09-09T22:27:31,252     dist.fetch_build_eggs(dist.setup_requires)
2025-09-09T22:27:34,563   running egg_info
2025-09-09T22:27:34,630   creating /tmp/pip-pip-egg-info-ue3xmwrl/peptides.egg-info
2025-09-09T22:27:34,630   writing /tmp/pip-pip-egg-info-ue3xmwrl/peptides.egg-info/PKG-INFO
2025-09-09T22:27:34,631   writing dependency_links to /tmp/pip-pip-egg-info-ue3xmwrl/peptides.egg-info/dependency_links.txt
2025-09-09T22:27:34,632   writing top-level names to /tmp/pip-pip-egg-info-ue3xmwrl/peptides.egg-info/top_level.txt
2025-09-09T22:27:34,632   writing manifest file '/tmp/pip-pip-egg-info-ue3xmwrl/peptides.egg-info/SOURCES.txt'
2025-09-09T22:27:34,772   reading manifest file '/tmp/pip-pip-egg-info-ue3xmwrl/peptides.egg-info/SOURCES.txt'
2025-09-09T22:27:34,772   reading manifest template 'MANIFEST.in'
2025-09-09T22:27:34,773   warning: no files found matching 'pyproject.toml'
2025-09-09T22:27:34,789   warning: no previously-included files found matching 'peptides/data/tables.py'
2025-09-09T22:27:34,790   no previously-included directories found matching 'tests'
2025-09-09T22:27:34,790   adding license file 'COPYING'
2025-09-09T22:27:34,795   writing manifest file '/tmp/pip-pip-egg-info-ue3xmwrl/peptides.egg-info/SOURCES.txt'
2025-09-09T22:27:34,890   Preparing metadata (setup.py): finished with status 'done'
2025-09-09T22:27:34,895   Source in /tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd has version 0.1.0, which satisfies requirement peptides==0.1.0 from https://files.pythonhosted.org/packages/80/df/c741791a1174f6a8ce392b124f20d3387ab7550dd7dd2910bc91dea02043/peptides-0.1.0.tar.gz
2025-09-09T22:27:34,895   Removed peptides==0.1.0 from https://files.pythonhosted.org/packages/80/df/c741791a1174f6a8ce392b124f20d3387ab7550dd7dd2910bc91dea02043/peptides-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-hlahncdd'
2025-09-09T22:27:34,901 Created temporary directory: /tmp/pip-unpack-hnwa2b6n
2025-09-09T22:27:34,901 Created temporary directory: /tmp/pip-unpack-e12zhreo
2025-09-09T22:27:34,901 Building wheels for collected packages: peptides
2025-09-09T22:27:34,903   Created temporary directory: /tmp/pip-wheel-1_x_7fov
2025-09-09T22:27:34,903   DEPRECATION: Building 'peptides' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'peptides'. Discussion can be found at https://github.com/pypa/pip/issues/6334
2025-09-09T22:27:34,904   Building wheel for peptides (setup.py): started
2025-09-09T22:27:34,905   Destination directory: /tmp/pip-wheel-1_x_7fov
2025-09-09T22:27:34,905   Running command python setup.py bdist_wheel
2025-09-09T22:27:35,553   /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-09-09T22:27:35,553   !!

2025-09-09T22:27:35,553           ********************************************************************************
2025-09-09T22:27:35,553           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-09-09T22:27:35,553           License :: OSI Approved :: MIT License

2025-09-09T22:27:35,554           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-09-09T22:27:35,554           ********************************************************************************

2025-09-09T22:27:35,554   !!
2025-09-09T22:27:35,554     self._finalize_license_expression()
2025-09-09T22:27:35,569   /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2025-09-09T22:27:35,569   !!

2025-09-09T22:27:35,569           ********************************************************************************
2025-09-09T22:27:35,569           Requirements should be satisfied by a PEP 517 installer.
2025-09-09T22:27:35,569           If you are using pip, you can try `pip install --use-pep517`.

2025-09-09T22:27:35,570           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-09-09T22:27:35,570           or your builds will no longer be supported.
2025-09-09T22:27:35,570           ********************************************************************************

2025-09-09T22:27:35,570   !!
2025-09-09T22:27:35,570     dist.fetch_build_eggs(dist.setup_requires)
2025-09-09T22:27:36,198   running bdist_wheel
2025-09-09T22:27:36,718   running build
2025-09-09T22:27:36,718   running build_py
2025-09-09T22:27:36,723   Traceback (most recent call last):
2025-09-09T22:27:36,724     File "/tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd/setup.py", line 16, in <module>
2025-09-09T22:27:36,724       import astor
2025-09-09T22:27:36,724   ModuleNotFoundError: No module named 'astor'

2025-09-09T22:27:36,724   The above exception was the direct cause of the following exception:

2025-09-09T22:27:36,724   Traceback (most recent call last):
2025-09-09T22:27:36,729     File "<string>", line 2, in <module>
2025-09-09T22:27:36,730       exec(compile('''
2025-09-09T22:27:36,730       ~~~~^^^^^^^^^^^^
2025-09-09T22:27:36,730       # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2025-09-09T22:27:36,730       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-09T22:27:36,730       ...<32 lines>...
2025-09-09T22:27:36,730       exec(compile(setup_py_code, filename, "exec"))
2025-09-09T22:27:36,730       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-09T22:27:36,730       ''' % ('/tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd/setup.py',), "<pip-setuptools-caller>", "exec"))
2025-09-09T22:27:36,730       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-09T22:27:36,730     File "<pip-setuptools-caller>", line 35, in <module>
2025-09-09T22:27:36,731     File "/tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd/setup.py", line 142, in <module>
2025-09-09T22:27:36,731       setuptools.setup(cmdclass=dict(build_py=build_py, codegen=codegen))
2025-09-09T22:27:36,731       ~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2025-09-09T22:27:36,731     File "/usr/local/lib/python3.13/dist-packages/setuptools/__init__.py", line 115, in setup
2025-09-09T22:27:36,731       return distutils.core.setup(**attrs)
2025-09-09T22:27:36,731              ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^
2025-09-09T22:27:36,731     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 186, in setup
2025-09-09T22:27:36,731       return run_commands(dist)
2025-09-09T22:27:36,732     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 202, in run_commands
2025-09-09T22:27:36,732       dist.run_commands()
2025-09-09T22:27:36,732       ~~~~~~~~~~~~~~~~~^^
2025-09-09T22:27:36,732     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1002, in run_commands
2025-09-09T22:27:36,732       self.run_command(cmd)
2025-09-09T22:27:36,732       ~~~~~~~~~~~~~~~~^^^^^
2025-09-09T22:27:36,732     File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command
2025-09-09T22:27:36,732       super().run_command(command)
2025-09-09T22:27:36,732       ~~~~~~~~~~~~~~~~~~~^^^^^^^^^
2025-09-09T22:27:36,733     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command
2025-09-09T22:27:36,733       cmd_obj.run()
2025-09-09T22:27:36,733       ~~~~~~~~~~~^^
2025-09-09T22:27:36,733     File "/usr/local/lib/python3.13/dist-packages/setuptools/command/bdist_wheel.py", line 370, in run
2025-09-09T22:27:36,733       self.run_command("build")
2025-09-09T22:27:36,733       ~~~~~~~~~~~~~~~~^^^^^^^^^
2025-09-09T22:27:36,733     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command
2025-09-09T22:27:36,733       self.distribution.run_command(command)
2025-09-09T22:27:36,734       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^
2025-09-09T22:27:36,734     File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command
2025-09-09T22:27:36,734       super().run_command(command)
2025-09-09T22:27:36,734       ~~~~~~~~~~~~~~~~~~~^^^^^^^^^
2025-09-09T22:27:36,734     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command
2025-09-09T22:27:36,734       cmd_obj.run()
2025-09-09T22:27:36,734       ~~~~~~~~~~~^^
2025-09-09T22:27:36,734     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/command/build.py", line 135, in run
2025-09-09T22:27:36,734       self.run_command(cmd_name)
2025-09-09T22:27:36,735       ~~~~~~~~~~~~~~~~^^^^^^^^^^
2025-09-09T22:27:36,735     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py", line 357, in run_command
2025-09-09T22:27:36,735       self.distribution.run_command(command)
2025-09-09T22:27:36,735       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^
2025-09-09T22:27:36,735     File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command
2025-09-09T22:27:36,735       super().run_command(command)
2025-09-09T22:27:36,735       ~~~~~~~~~~~~~~~~~~~^^^^^^^^^
2025-09-09T22:27:36,735     File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command
2025-09-09T22:27:36,736       cmd_obj.run()
2025-09-09T22:27:36,736       ~~~~~~~~~~~^^
2025-09-09T22:27:36,736     File "/tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd/setup.py", line 136, in run
2025-09-09T22:27:36,736       _codegen.run()
2025-09-09T22:27:36,736       ~~~~~~~~~~~~^^
2025-09-09T22:27:36,736     File "/tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd/setup.py", line 112, in run
2025-09-09T22:27:36,736       raise RuntimeError("`astor` package is required for the `codegen` command") from astor
2025-09-09T22:27:36,736   RuntimeError: `astor` package is required for the `codegen` command
2025-09-09T22:27:36,843   ERROR: python setup.py bdist_wheel exited with 1
2025-09-09T22:27:36,854   [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c '
2025-09-09T22:27:36,854   exec(compile('"'"''"'"''"'"'
2025-09-09T22:27:36,854   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2025-09-09T22:27:36,854   #
2025-09-09T22:27:36,854   # - It imports setuptools before invoking setup.py, to enable projects that directly
2025-09-09T22:27:36,854   #   import from `distutils.core` to work with newer packaging standards.
2025-09-09T22:27:36,854   # - It provides a clear error message when setuptools is not installed.
2025-09-09T22:27:36,854   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2025-09-09T22:27:36,854   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2025-09-09T22:27:36,854   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2025-09-09T22:27:36,854   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2025-09-09T22:27:36,854   import os, sys, tokenize, traceback
2025-09-09T22:27:36,854   
2025-09-09T22:27:36,854   try:
2025-09-09T22:27:36,854       import setuptools
2025-09-09T22:27:36,854   except ImportError:
2025-09-09T22:27:36,854       print(
2025-09-09T22:27:36,854           "ERROR: Can not execute `setup.py` since setuptools failed to import in "
2025-09-09T22:27:36,854           "the build environment with exception:",
2025-09-09T22:27:36,854           file=sys.stderr,
2025-09-09T22:27:36,854       )
2025-09-09T22:27:36,854       traceback.print_exc()
2025-09-09T22:27:36,854       sys.exit(1)
2025-09-09T22:27:36,854   
2025-09-09T22:27:36,854   __file__ = %r
2025-09-09T22:27:36,854   sys.argv[0] = __file__
2025-09-09T22:27:36,854   
2025-09-09T22:27:36,854   if os.path.exists(__file__):
2025-09-09T22:27:36,854       filename = __file__
2025-09-09T22:27:36,854       with tokenize.open(__file__) as f:
2025-09-09T22:27:36,854           setup_py_code = f.read()
2025-09-09T22:27:36,854   else:
2025-09-09T22:27:36,854       filename = "<auto-generated setuptools caller>"
2025-09-09T22:27:36,854       setup_py_code = "from setuptools import setup; setup()"
2025-09-09T22:27:36,854   
2025-09-09T22:27:36,854   exec(compile(setup_py_code, filename, "exec"))
2025-09-09T22:27:36,854   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' bdist_wheel -d /tmp/pip-wheel-1_x_7fov[/]
2025-09-09T22:27:36,855   [bold magenta]cwd[/]: /tmp/pip-wheel-umby9co4/peptides_a448aea323074189be83f8a3bcd897bd/
2025-09-09T22:27:36,855   Building wheel for peptides (setup.py): finished with status 'error'
2025-09-09T22:27:36,855   ERROR: Failed building wheel for peptides
2025-09-09T22:27:36,856   Running setup.py clean for peptides
2025-09-09T22:27:36,857   Running command python setup.py clean
2025-09-09T22:27:37,508   /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
2025-09-09T22:27:37,508   !!

2025-09-09T22:27:37,508           ********************************************************************************
2025-09-09T22:27:37,508           Please consider removing the following classifiers in favor of a SPDX license expression:

2025-09-09T22:27:37,508           License :: OSI Approved :: MIT License

2025-09-09T22:27:37,508           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-09-09T22:27:37,509           ********************************************************************************

2025-09-09T22:27:37,509   !!
2025-09-09T22:27:37,509     self._finalize_license_expression()
2025-09-09T22:27:37,523   /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2025-09-09T22:27:37,524   !!

2025-09-09T22:27:37,524           ********************************************************************************
2025-09-09T22:27:37,524           Requirements should be satisfied by a PEP 517 installer.
2025-09-09T22:27:37,524           If you are using pip, you can try `pip install --use-pep517`.

2025-09-09T22:27:37,524           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-09-09T22:27:37,524           or your builds will no longer be supported.
2025-09-09T22:27:37,524           ********************************************************************************

2025-09-09T22:27:37,525   !!
2025-09-09T22:27:37,525     dist.fetch_build_eggs(dist.setup_requires)
2025-09-09T22:27:38,218   running clean
2025-09-09T22:27:38,354   'build/lib' does not exist -- can't clean it
2025-09-09T22:27:38,354   'build/bdist.linux-armv7l' does not exist -- can't clean it
2025-09-09T22:27:38,354   'build/scripts-3.13' does not exist -- can't clean it
2025-09-09T22:27:38,448 Failed to build peptides
2025-09-09T22:27:38,449 ERROR: Failed to build one or more wheels
2025-09-09T22:27:38,450 Exception information:
2025-09-09T22:27:38,450 Traceback (most recent call last):
2025-09-09T22:27:38,450   File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper
2025-09-09T22:27:38,450     status = _inner_run()
2025-09-09T22:27:38,450   File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run
2025-09-09T22:27:38,450     return self.run(options, args)
2025-09-09T22:27:38,450            ~~~~~~~~^^^^^^^^^^^^^^^
2025-09-09T22:27:38,450   File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper
2025-09-09T22:27:38,450     return func(self, options, args)
2025-09-09T22:27:38,450   File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run
2025-09-09T22:27:38,450     raise CommandError("Failed to build one or more wheels")
2025-09-09T22:27:38,450 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2025-09-09T22:27:38,454 Removed build tracker: '/tmp/pip-build-tracker-hlahncdd'