2025-09-09T23:50:29,746 Created temporary directory: /tmp/pip-build-tracker-uhj4d5l4 2025-09-09T23:50:29,747 Initialized build tracking at /tmp/pip-build-tracker-uhj4d5l4 2025-09-09T23:50:29,747 Created build tracker: /tmp/pip-build-tracker-uhj4d5l4 2025-09-09T23:50:29,747 Entered build tracker: /tmp/pip-build-tracker-uhj4d5l4 2025-09-09T23:50:29,748 Created temporary directory: /tmp/pip-wheel-nlxz9j70 2025-09-09T23:50:29,751 Created temporary directory: /tmp/pip-ephem-wheel-cache-cd8eu73x 2025-09-09T23:50:29,813 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-09T23:50:29,815 2 location(s) to search for versions of plink: 2025-09-09T23:50:29,815 * https://pypi.org/simple/plink/ 2025-09-09T23:50:29,815 * https://www.piwheels.org/simple/plink/ 2025-09-09T23:50:29,815 Fetching project page and analyzing links: https://pypi.org/simple/plink/ 2025-09-09T23:50:29,816 Getting page https://pypi.org/simple/plink/ 2025-09-09T23:50:29,817 Found index url https://pypi.org/simple/ 2025-09-09T23:50:29,976 Fetched page https://pypi.org/simple/plink/ as application/vnd.pypi.simple.v1+json 2025-09-09T23:50:29,984 Found link https://files.pythonhosted.org/packages/75/6b/dc9b4868f76e0249a7c53d9117fe76ae37d605422b458a469c2fa466ed90/plink-1.7.1.tar.gz (from https://pypi.org/simple/plink/), version: 1.7.1 2025-09-09T23:50:29,985 Found link https://files.pythonhosted.org/packages/d5/a2/b74f31430c7e0802dce364e440d8d4c62ea160830ec873f4ccf8cd8ce185/plink-1.8.tar.gz (from https://pypi.org/simple/plink/), version: 1.8 2025-09-09T23:50:29,985 Found link https://files.pythonhosted.org/packages/7f/57/048ab431a24ef7a7d025e62cac7a050e6d27d1c46493feadb6058239494d/plink-1.9.tar.gz (from https://pypi.org/simple/plink/), version: 1.9 2025-09-09T23:50:29,985 Found link https://files.pythonhosted.org/packages/d0/96/930b8b70c2b1f3c06259e56b6e205e56706cb02617157531b93e205d2e8a/plink-1.9.1.tar.gz (from https://pypi.org/simple/plink/), version: 1.9.1 2025-09-09T23:50:29,986 Found link https://files.pythonhosted.org/packages/c6/d2/94c4ac2d1d763ae80e14d51e790e184a7aea3ce90a79000d8019a6552a28/plink-1.9.2.tar.gz (from https://pypi.org/simple/plink/), version: 1.9.2 2025-09-09T23:50:29,986 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/bb/5c/d4ae488d73ea2688de1f6cc762780865a84569336e9486b2eac5849f1222/plink-2.0-py2.py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,987 Found link https://files.pythonhosted.org/packages/1c/23/b74b302deab9abbfa7031310ebdd684b8b9e2266da803e8a9dd4a8f5f5e9/plink-2.0.tar.gz (from https://pypi.org/simple/plink/), version: 2.0 2025-09-09T23:50:29,987 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/de/16/f58677139bca800581baf4bd68629522925ed41731754bd6c13096d7bb51/plink-2.0.1-py2.py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,987 Found link https://files.pythonhosted.org/packages/72/5b/d7d21ec512cfc8e9367da3a84811f65e62e9d535df010ab53947fd972761/plink-2.0.1.tar.gz (from https://pypi.org/simple/plink/), version: 2.0.1 2025-09-09T23:50:29,987 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/e9/c0/1fac922806dbacd921137858af746bc0b4a0bba793eeddf3a494917111a6/plink-2.1-py2.py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,987 Found link https://files.pythonhosted.org/packages/ba/c6/0830403dbca2d2ca9ade3d20b25900432a7a57767e0d178c363d8c8fb9b1/plink-2.1.tar.gz (from https://pypi.org/simple/plink/), version: 2.1 2025-09-09T23:50:29,988 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/c0/12/1a32754acead7b6476a7cfb087da90bbf2ae8d8386c8aaae1837aa9e9c09/plink-2.2-py2.py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,988 Found link https://files.pythonhosted.org/packages/15/91/55b2056a5d95338100a1d28376ed5a460b8450f256bab349edf7fffe8218/plink-2.2.tar.gz (from https://pypi.org/simple/plink/), version: 2.2 2025-09-09T23:50:29,988 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/72/f0/33f4412761b6b1538bf599a1d47c3b5b877b28e801023b96ad69e4fe7f54/plink-2.3-py2.py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,988 Found link https://files.pythonhosted.org/packages/52/d9/cf639e5f1b4ee3a6593f60618a3a523a14f18382f4a600fa5ed9ca25c26d/plink-2.3.tar.gz (from https://pypi.org/simple/plink/), version: 2.3 2025-09-09T23:50:29,989 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/4e/f9/937a709691790befb44f05837ad3e97441803de4d8ce5e98d9bc843fb6e4/plink-2.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,989 Found link https://files.pythonhosted.org/packages/d0/57/56a237e06ce42ab71ad96338efd1077c797350a919877adf2090d2829426/plink-2.3.1.tar.gz (from https://pypi.org/simple/plink/), version: 2.3.1 2025-09-09T23:50:29,989 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/c8/5f/57765c16320051eafa22144a4f3e1d6df0e70a8a8282e1020c9f51a15612/plink-2.4-py2.py3-none-any.whl (from https://pypi.org/simple/plink/) (requires-python:>=3) 2025-09-09T23:50:29,990 Found link https://files.pythonhosted.org/packages/a1/81/a987a5c456a025a1ab82f568d2f9cbddd00810d4cb9fda75c0d27d487132/plink-2.4.tar.gz (from https://pypi.org/simple/plink/) (requires-python:>=3), version: 2.4 2025-09-09T23:50:29,990 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/32/35/e4c7aaf1fb1d419655919f77dfcfd53c08c42a839a4227b3b133cfed5bb8/plink-2.4.1-py3-none-any.whl (from https://pypi.org/simple/plink/) (requires-python:>=3) 2025-09-09T23:50:29,990 Found link https://files.pythonhosted.org/packages/17/cf/bf25ec25e71f4731f3e844ea857ab6e9e0f5085261506a899c8a83c2b576/plink-2.4.1.tar.gz (from https://pypi.org/simple/plink/) (requires-python:>=3), version: 2.4.1 2025-09-09T23:50:29,990 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/94/ae/c7456f21974e6dea32241baf96bde5a3777a5651ab64c2945fc8539ffb15/plink-2.4.2-py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,991 Found link https://files.pythonhosted.org/packages/c5/f7/82e61fefb774e6eee9adcc10e16dd22aeb1ac01c49789d8a912a49c506f2/plink-2.4.2.tar.gz (from https://pypi.org/simple/plink/), version: 2.4.2 2025-09-09T23:50:29,991 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/0a/12/0e8df2ef0f5b7c92efb3605471fa12e6b00b93bd4d6a879f2f0803bb26a2/plink-2.4.3-py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,991 Found link https://files.pythonhosted.org/packages/e9/88/3cf86dde86a9d40117e3fc97100515fc4b9bf40d2a675e3d23cab9a2c844/plink-2.4.3.tar.gz (from https://pypi.org/simple/plink/), version: 2.4.3 2025-09-09T23:50:29,991 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/f6/d1/89ddc1d612e84eb5b3307789ff9993ecfcb9d31c191f8ae256b0bc75f34d/plink-2.4.4-py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,992 Found link https://files.pythonhosted.org/packages/b1/e8/b03c8b7e42b0393a4fbfc21ac1adf105728ee70e09e6ae1c77f772adfde6/plink-2.4.4.tar.gz (from https://pypi.org/simple/plink/), version: 2.4.4 2025-09-09T23:50:29,992 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/21/d0/743774ef3b7828865ebbe90b1bb17b977a3369137ce6ab9e0d1819f7d37d/plink-2.4.5-py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,992 Found link https://files.pythonhosted.org/packages/63/22/b51014ecbc2d677b4afe217fe2fcabb95258d9880b7b1e3e3c9fd20c35cd/plink-2.4.5.tar.gz (from https://pypi.org/simple/plink/), version: 2.4.5 2025-09-09T23:50:29,992 Skipping link: No binaries permitted for plink: https://files.pythonhosted.org/packages/9a/bf/8b605bc9650ef72886556c092bc577ffff952c2e04ff98f1bfa7c10f37ad/plink-2.4.6-py3-none-any.whl (from https://pypi.org/simple/plink/) 2025-09-09T23:50:29,992 Found link https://files.pythonhosted.org/packages/c5/b5/3af79ee98223194492647f42e1a61f1b0d95980144fd4ab420152d3361f2/plink-2.4.6.tar.gz (from https://pypi.org/simple/plink/), version: 2.4.6 2025-09-09T23:50:29,993 Fetching project page and analyzing links: https://www.piwheels.org/simple/plink/ 2025-09-09T23:50:29,993 Getting page https://www.piwheels.org/simple/plink/ 2025-09-09T23:50:29,994 Found index url https://www.piwheels.org/simple/ 2025-09-09T23:50:30,079 Fetched page https://www.piwheels.org/simple/plink/ as text/html 2025-09-09T23:50:30,084 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.4.6-py3-none-any.whl#sha256=12bd34bdacf7670eb0356a9a0427857564bd8c39327fb8f597a5aec343319fa4 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,084 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.4.5-py3-none-any.whl#sha256=2e43a56a5f96fc89d56900d6a948cfab875df3c1f1d59e344cfcb8307b8fee6e (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,084 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.4.4-py3-none-any.whl#sha256=3612a54ed047d0bd85555507def0cccee089c76c1db318ef987c4681e3fd771f (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,084 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.4.3-py3-none-any.whl#sha256=eaac5d50ddadbd70b127bb80dcb3f659fbb8e1fb3d5a7ae6f45e91a0344beaed (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,084 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.4.2-py3-none-any.whl#sha256=f37c583eca8f3b6b303b736c61d955d186771003856f021c40b69c278b1a1026 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,085 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.4-py2.py3-none-any.whl#sha256=93d877bb161e8d2d1b26fa6fe133d0eaff7244c8da297ea88ac05cd08c0ecec4 (from https://www.piwheels.org/simple/plink/) (requires-python:>=3) 2025-09-09T23:50:30,085 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.3.1-py2.py3-none-any.whl#sha256=e680000fb94f481030919bd9184f9545fa1d36ae3749f26fc47147879f65b4fd (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,085 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.3-py2.py3-none-any.whl#sha256=3a329fa07e563d31bf8a2e4ce18b274862ca3753e4bf976f542c66151cc00292 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,085 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.2-py2.py3-none-any.whl#sha256=4043e9f85cf0927b5f176fbe2f83a6b7c2285e939c80d3a7729e5ca332245499 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,085 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.1-py2.py3-none-any.whl#sha256=f7c49b4467d253185ff4a85e672f7bff8929fae048d7413e549dcc7aef9b8104 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,085 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.0.1-py2.py3-none-any.whl#sha256=bcc9d53945532eaa4aac41fa99144e164c727f3983857c36cb529bbd34e32383 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,086 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-2.0-py2.py3-none-any.whl#sha256=ca745e0f047b4a972829c518caec724f9db0c671e3f08129c11b7ae5bfcff0d4 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,086 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-1.9.2-py3-none-any.whl#sha256=f7b2274af255d8d1533368d7a780f63865f6d0e71a290228f074c3964b26388d (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,086 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-1.9.1-py3-none-any.whl#sha256=ce24830dff5b2f3329e27728cdc20249da327623c4a57bec70857ec1992cd8a0 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,086 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-1.9-py3-none-any.whl#sha256=6596a5dbf8af1e31813a9d9a27a197d0b938bd389a9fa3a015851577095ab202 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,086 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-1.8-py3-none-any.whl#sha256=63a7c2b12b49c9ff7b59bc46986ffa19654e6b3c4ee53a46fce8698f9c056fc0 (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,086 Skipping link: No binaries permitted for plink: https://archive1.piwheels.org/simple/plink/plink-1.7.1-py3-none-any.whl#sha256=a4932a41003f833d8d8e93e40a2344b97bb19988079c1565ef225695d021f1ae (from https://www.piwheels.org/simple/plink/) 2025-09-09T23:50:30,086 Skipping link: not a file: https://www.piwheels.org/simple/plink/ 2025-09-09T23:50:30,087 Skipping link: not a file: https://pypi.org/simple/plink/ 2025-09-09T23:50:30,114 Given no hashes to check 1 links for project 'plink': discarding no candidates 2025-09-09T23:50:30,115 Collecting plink==2.4.1 2025-09-09T23:50:30,117 Created temporary directory: /tmp/pip-unpack-ygbczl85 2025-09-09T23:50:30,271 Downloading plink-2.4.1.tar.gz (264 kB) 2025-09-09T23:50:30,373 Added plink==2.4.1 from https://files.pythonhosted.org/packages/17/cf/bf25ec25e71f4731f3e844ea857ab6e9e0f5085261506a899c8a83c2b576/plink-2.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-uhj4d5l4' 2025-09-09T23:50:30,374 Running setup.py (path:/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py) egg_info for package plink 2025-09-09T23:50:30,374 Created temporary directory: /tmp/pip-pip-egg-info-0dc4hpzr 2025-09-09T23:50:30,375 Preparing metadata (setup.py): started 2025-09-09T23:50:30,375 Running command python setup.py egg_info 2025-09-09T23:50:30,925 /tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py:2: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81. 2025-09-09T23:50:30,925 from pkg_resources import load_entry_point 2025-09-09T23:50:31,882 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-09T23:50:31,882 !! 2025-09-09T23:50:31,882 ******************************************************************************** 2025-09-09T23:50:31,882 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-09T23:50:31,882 License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) 2025-09-09T23:50:31,882 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-09T23:50:31,883 ******************************************************************************** 2025-09-09T23:50:31,883 !! 2025-09-09T23:50:31,883 self._finalize_license_expression() 2025-09-09T23:50:31,955 running egg_info 2025-09-09T23:50:32,029 creating /tmp/pip-pip-egg-info-0dc4hpzr/plink.egg-info 2025-09-09T23:50:32,029 writing /tmp/pip-pip-egg-info-0dc4hpzr/plink.egg-info/PKG-INFO 2025-09-09T23:50:32,030 writing dependency_links to /tmp/pip-pip-egg-info-0dc4hpzr/plink.egg-info/dependency_links.txt 2025-09-09T23:50:32,031 writing entry points to /tmp/pip-pip-egg-info-0dc4hpzr/plink.egg-info/entry_points.txt 2025-09-09T23:50:32,032 writing top-level names to /tmp/pip-pip-egg-info-0dc4hpzr/plink.egg-info/top_level.txt 2025-09-09T23:50:32,032 writing manifest file '/tmp/pip-pip-egg-info-0dc4hpzr/plink.egg-info/SOURCES.txt' 2025-09-09T23:50:32,262 reading manifest file '/tmp/pip-pip-egg-info-0dc4hpzr/plink.egg-info/SOURCES.txt' 2025-09-09T23:50:32,265 writing manifest file '/tmp/pip-pip-egg-info-0dc4hpzr/plink.egg-info/SOURCES.txt' 2025-09-09T23:50:32,386 Preparing metadata (setup.py): finished with status 'done' 2025-09-09T23:50:32,391 Source in /tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b has version 2.4.1, which satisfies requirement plink==2.4.1 from https://files.pythonhosted.org/packages/17/cf/bf25ec25e71f4731f3e844ea857ab6e9e0f5085261506a899c8a83c2b576/plink-2.4.1.tar.gz 2025-09-09T23:50:32,391 Removed plink==2.4.1 from https://files.pythonhosted.org/packages/17/cf/bf25ec25e71f4731f3e844ea857ab6e9e0f5085261506a899c8a83c2b576/plink-2.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-uhj4d5l4' 2025-09-09T23:50:32,395 Created temporary directory: /tmp/pip-unpack-1un04oo_ 2025-09-09T23:50:32,395 Created temporary directory: /tmp/pip-unpack-qdl6ohmg 2025-09-09T23:50:32,396 Building wheels for collected packages: plink 2025-09-09T23:50:32,397 Created temporary directory: /tmp/pip-wheel-ke22rrnf 2025-09-09T23:50:32,397 DEPRECATION: Building 'plink' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'plink'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-09T23:50:32,398 Building wheel for plink (setup.py): started 2025-09-09T23:50:32,399 Destination directory: /tmp/pip-wheel-ke22rrnf 2025-09-09T23:50:32,399 Running command python setup.py bdist_wheel 2025-09-09T23:50:32,935 /tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py:2: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81. 2025-09-09T23:50:32,935 from pkg_resources import load_entry_point 2025-09-09T23:50:33,823 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-09T23:50:33,824 !! 2025-09-09T23:50:33,824 ******************************************************************************** 2025-09-09T23:50:33,824 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-09T23:50:33,824 License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) 2025-09-09T23:50:33,824 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-09T23:50:33,824 ******************************************************************************** 2025-09-09T23:50:33,824 !! 2025-09-09T23:50:33,825 self._finalize_license_expression() 2025-09-09T23:50:33,825 running bdist_wheel 2025-09-09T23:50:34,568 /tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py:2: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81. 2025-09-09T23:50:34,568 from pkg_resources import load_entry_point 2025-09-09T23:50:35,442 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-09T23:50:35,443 !! 2025-09-09T23:50:35,443 ******************************************************************************** 2025-09-09T23:50:35,443 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-09T23:50:35,443 License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) 2025-09-09T23:50:35,443 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-09T23:50:35,443 ******************************************************************************** 2025-09-09T23:50:35,444 !! 2025-09-09T23:50:35,444 self._finalize_license_expression() 2025-09-09T23:50:35,514 running build 2025-09-09T23:50:35,515 running build_py 2025-09-09T23:50:35,590 creating build/lib/plink 2025-09-09T23:50:35,590 copying plink_src/viewer.py -> build/lib/plink 2025-09-09T23:50:35,591 copying plink_src/vertex.py -> build/lib/plink 2025-09-09T23:50:35,591 copying plink_src/version.py -> build/lib/plink 2025-09-09T23:50:35,592 copying plink_src/smooth.py -> build/lib/plink 2025-09-09T23:50:35,592 copying plink_src/manager.py -> build/lib/plink 2025-09-09T23:50:35,593 copying plink_src/ipython_tools.py -> build/lib/plink 2025-09-09T23:50:35,593 copying plink_src/gui.py -> build/lib/plink 2025-09-09T23:50:35,594 copying plink_src/editor.py -> build/lib/plink 2025-09-09T23:50:35,595 copying plink_src/dialog.py -> build/lib/plink 2025-09-09T23:50:35,595 copying plink_src/crossings.py -> build/lib/plink 2025-09-09T23:50:35,596 copying plink_src/colors.py -> build/lib/plink 2025-09-09T23:50:35,596 copying plink_src/canvasvg.py -> build/lib/plink 2025-09-09T23:50:35,597 copying plink_src/arrow.py -> build/lib/plink 2025-09-09T23:50:35,597 copying plink_src/app.py -> build/lib/plink 2025-09-09T23:50:35,598 copying plink_src/__init__.py -> build/lib/plink 2025-09-09T23:50:35,602 creating build/lib/plink/doc 2025-09-09T23:50:35,603 copying plink_src/doc/searchindex.js -> build/lib/plink/doc 2025-09-09T23:50:35,603 copying plink_src/doc/search.html -> build/lib/plink/doc 2025-09-09T23:50:35,604 copying plink_src/doc/py-modindex.html -> build/lib/plink/doc 2025-09-09T23:50:35,604 copying plink_src/doc/plink.html -> build/lib/plink/doc 2025-09-09T23:50:35,605 copying plink_src/doc/objects.inv -> build/lib/plink/doc 2025-09-09T23:50:35,605 copying plink_src/doc/installing.html -> build/lib/plink/doc 2025-09-09T23:50:35,606 copying plink_src/doc/index.html -> build/lib/plink/doc 2025-09-09T23:50:35,606 copying plink_src/doc/genindex.html -> build/lib/plink/doc 2025-09-09T23:50:35,607 copying plink_src/doc/.buildinfo -> build/lib/plink/doc 2025-09-09T23:50:35,607 creating build/lib/plink/doc/_static 2025-09-09T23:50:35,608 copying plink_src/doc/_static/underscore.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,608 copying plink_src/doc/_static/underscore-1.3.1.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,609 copying plink_src/doc/_static/underscore-1.13.1.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,610 copying plink_src/doc/_static/sidebar.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,610 copying plink_src/doc/_static/searchtools.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,611 copying plink_src/doc/_static/pygments.css -> build/lib/plink/doc/_static 2025-09-09T23:50:35,611 copying plink_src/doc/_static/plus.png -> build/lib/plink/doc/_static 2025-09-09T23:50:35,612 copying plink_src/doc/_static/minus.png -> build/lib/plink/doc/_static 2025-09-09T23:50:35,612 copying plink_src/doc/_static/language_data.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,613 copying plink_src/doc/_static/jquery.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,614 copying plink_src/doc/_static/jquery-3.5.1.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,616 copying plink_src/doc/_static/file.png -> build/lib/plink/doc/_static 2025-09-09T23:50:35,616 copying plink_src/doc/_static/documentation_options.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,617 copying plink_src/doc/_static/doctools.js -> build/lib/plink/doc/_static 2025-09-09T23:50:35,617 copying plink_src/doc/_static/default.css -> build/lib/plink/doc/_static 2025-09-09T23:50:35,618 copying plink_src/doc/_static/classic.css -> build/lib/plink/doc/_static 2025-09-09T23:50:35,618 copying plink_src/doc/_static/basic.css -> build/lib/plink/doc/_static 2025-09-09T23:50:35,619 creating build/lib/plink/doc/_sources 2025-09-09T23:50:35,619 copying plink_src/doc/_sources/plink.rst.txt -> build/lib/plink/doc/_sources 2025-09-09T23:50:35,620 copying plink_src/doc/_sources/installing.rst.txt -> build/lib/plink/doc/_sources 2025-09-09T23:50:35,620 copying plink_src/doc/_sources/index.rst.txt -> build/lib/plink/doc/_sources 2025-09-09T23:50:35,621 creating build/lib/plink/doc/_images 2025-09-09T23:50:35,621 copying plink_src/doc/_images/plink-action.png -> build/lib/plink/doc/_images 2025-09-09T23:50:36,278 /tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py:2: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81. 2025-09-09T23:50:36,278 from pkg_resources import load_entry_point 2025-09-09T23:50:37,150 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-09T23:50:37,150 !! 2025-09-09T23:50:37,150 ******************************************************************************** 2025-09-09T23:50:37,150 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-09T23:50:37,150 License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) 2025-09-09T23:50:37,151 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-09T23:50:37,151 ******************************************************************************** 2025-09-09T23:50:37,151 !! 2025-09-09T23:50:37,151 self._finalize_license_expression() 2025-09-09T23:50:37,151 running build_docs 2025-09-09T23:50:37,330 Traceback (most recent call last): 2025-09-09T23:50:37,336 File "/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py", line 130, in 2025-09-09T23:50:37,336 setup(name='plink', 2025-09-09T23:50:37,336 ~~~~~^^^^^^^^^^^^^^ 2025-09-09T23:50:37,336 version=version, 2025-09-09T23:50:37,337 ^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,337 ...<27 lines>... 2025-09-09T23:50:37,337 keywords = 'knot, link, editor, SnapPy', 2025-09-09T23:50:37,337 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,337 ) 2025-09-09T23:50:37,337 ^ 2025-09-09T23:50:37,337 File "/usr/local/lib/python3.13/dist-packages/setuptools/__init__.py", line 115, in setup 2025-09-09T23:50:37,338 return distutils.core.setup(**attrs) 2025-09-09T23:50:37,338 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T23:50:37,338 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 186, in setup 2025-09-09T23:50:37,338 return run_commands(dist) 2025-09-09T23:50:37,338 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 202, in run_commands 2025-09-09T23:50:37,338 dist.run_commands() 2025-09-09T23:50:37,338 ~~~~~~~~~~~~~~~~~^^ 2025-09-09T23:50:37,339 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1002, in run_commands 2025-09-09T23:50:37,339 self.run_command(cmd) 2025-09-09T23:50:37,339 ~~~~~~~~~~~~~~~~^^^^^ 2025-09-09T23:50:37,339 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-09T23:50:37,339 super().run_command(command) 2025-09-09T23:50:37,339 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T23:50:37,339 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-09T23:50:37,339 cmd_obj.run() 2025-09-09T23:50:37,340 ~~~~~~~~~~~^^ 2025-09-09T23:50:37,340 File "/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py", line 34, in run 2025-09-09T23:50:37,340 sphinx_cmd = load_entry_point('Sphinx>=0.6.1', 'console_scripts', 'sphinx-build') 2025-09-09T23:50:37,340 File "/usr/local/lib/python3.13/dist-packages/pkg_resources/__init__.py", line 534, in load_entry_point 2025-09-09T23:50:37,340 return get_distribution(dist).load_entry_point(group, name) 2025-09-09T23:50:37,340 ~~~~~~~~~~~~~~~~^^^^^^ 2025-09-09T23:50:37,340 File "/usr/local/lib/python3.13/dist-packages/pkg_resources/__init__.py", line 526, in get_distribution 2025-09-09T23:50:37,340 dist = get_provider(dist) 2025-09-09T23:50:37,341 File "/usr/local/lib/python3.13/dist-packages/pkg_resources/__init__.py", line 417, in get_provider 2025-09-09T23:50:37,341 return working_set.find(moduleOrReq) or require(str(moduleOrReq))[0] 2025-09-09T23:50:37,341 ~~~~~~~^^^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,341 File "/usr/local/lib/python3.13/dist-packages/pkg_resources/__init__.py", line 1065, in require 2025-09-09T23:50:37,341 needed = self.resolve(parse_requirements(requirements)) 2025-09-09T23:50:37,341 File "/usr/local/lib/python3.13/dist-packages/pkg_resources/__init__.py", line 892, in resolve 2025-09-09T23:50:37,341 dist = self._resolve_dist( 2025-09-09T23:50:37,341 req, best, replace_conflicting, env, installer, required_by, to_activate 2025-09-09T23:50:37,342 ) 2025-09-09T23:50:37,342 File "/usr/local/lib/python3.13/dist-packages/pkg_resources/__init__.py", line 933, in _resolve_dist 2025-09-09T23:50:37,342 raise DistributionNotFound(req, requirers) 2025-09-09T23:50:37,342 pkg_resources.DistributionNotFound: The 'Sphinx>=0.6.1' distribution was not found and is required by the application 2025-09-09T23:50:37,465 Traceback (most recent call last): 2025-09-09T23:50:37,466 File "/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py", line 57, in check_call 2025-09-09T23:50:37,466 subprocess.check_call(args) 2025-09-09T23:50:37,466 ~~~~~~~~~~~~~~~~~~~~~^^^^^^ 2025-09-09T23:50:37,466 File "/usr/lib/python3.13/subprocess.py", line 419, in check_call 2025-09-09T23:50:37,466 raise CalledProcessError(retcode, cmd) 2025-09-09T23:50:37,466 subprocess.CalledProcessError: Command '['/usr/bin/python3', 'setup.py', 'build_docs']' returned non-zero exit status 1. 2025-09-09T23:50:37,467 During handling of the above exception, another exception occurred: 2025-09-09T23:50:37,467 Traceback (most recent call last): 2025-09-09T23:50:37,471 File "", line 2, in 2025-09-09T23:50:37,471 exec(compile(''' 2025-09-09T23:50:37,471 ~~~~^^^^^^^^^^^^ 2025-09-09T23:50:37,471 # This is -- a caller that pip uses to run setup.py 2025-09-09T23:50:37,471 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,471 ...<32 lines>... 2025-09-09T23:50:37,471 exec(compile(setup_py_code, filename, "exec")) 2025-09-09T23:50:37,472 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,472 ''' % ('/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py',), "", "exec")) 2025-09-09T23:50:37,472 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,472 File "", line 35, in 2025-09-09T23:50:37,472 File "/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py", line 130, in 2025-09-09T23:50:37,472 setup(name='plink', 2025-09-09T23:50:37,472 ~~~~~^^^^^^^^^^^^^^ 2025-09-09T23:50:37,472 version=version, 2025-09-09T23:50:37,473 ^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,473 ...<27 lines>... 2025-09-09T23:50:37,473 keywords = 'knot, link, editor, SnapPy', 2025-09-09T23:50:37,473 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,473 ) 2025-09-09T23:50:37,473 ^ 2025-09-09T23:50:37,473 File "/usr/local/lib/python3.13/dist-packages/setuptools/__init__.py", line 115, in setup 2025-09-09T23:50:37,473 return distutils.core.setup(**attrs) 2025-09-09T23:50:37,473 ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T23:50:37,474 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 186, in setup 2025-09-09T23:50:37,474 return run_commands(dist) 2025-09-09T23:50:37,474 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/core.py", line 202, in run_commands 2025-09-09T23:50:37,474 dist.run_commands() 2025-09-09T23:50:37,474 ~~~~~~~~~~~~~~~~~^^ 2025-09-09T23:50:37,474 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1002, in run_commands 2025-09-09T23:50:37,474 self.run_command(cmd) 2025-09-09T23:50:37,475 ~~~~~~~~~~~~~~~~^^^^^ 2025-09-09T23:50:37,475 File "/usr/local/lib/python3.13/dist-packages/setuptools/dist.py", line 1102, in run_command 2025-09-09T23:50:37,475 super().run_command(command) 2025-09-09T23:50:37,475 ~~~~~~~~~~~~~~~~~~~^^^^^^^^^ 2025-09-09T23:50:37,475 File "/usr/local/lib/python3.13/dist-packages/setuptools/_distutils/dist.py", line 1021, in run_command 2025-09-09T23:50:37,475 cmd_obj.run() 2025-09-09T23:50:37,475 ~~~~~~~~~~~^^ 2025-09-09T23:50:37,475 File "/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py", line 70, in run 2025-09-09T23:50:37,475 check_call([python, 'setup.py', 'build_docs']) 2025-09-09T23:50:37,476 ~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-09T23:50:37,476 File "/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py", line 61, in check_call 2025-09-09T23:50:37,476 raise RuntimeError(command + ' failed for ' + executable) 2025-09-09T23:50:37,476 RuntimeError: build_docs failed for /usr/bin/python3 2025-09-09T23:50:37,594 ERROR: python setup.py bdist_wheel exited with 1 2025-09-09T23:50:37,606 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-09T23:50:37,606 exec(compile('"'"''"'"''"'"' 2025-09-09T23:50:37,606 # This is -- a caller that pip uses to run setup.py 2025-09-09T23:50:37,606 # 2025-09-09T23:50:37,606 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-09T23:50:37,606 # import from `distutils.core` to work with newer packaging standards. 2025-09-09T23:50:37,606 # - It provides a clear error message when setuptools is not installed. 2025-09-09T23:50:37,606 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-09T23:50:37,606 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-09T23:50:37,606 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-09T23:50:37,606 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-09T23:50:37,606 import os, sys, tokenize, traceback 2025-09-09T23:50:37,606 2025-09-09T23:50:37,606 try: 2025-09-09T23:50:37,606 import setuptools 2025-09-09T23:50:37,606 except ImportError: 2025-09-09T23:50:37,606 print( 2025-09-09T23:50:37,606 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-09T23:50:37,606 "the build environment with exception:", 2025-09-09T23:50:37,606 file=sys.stderr, 2025-09-09T23:50:37,606 ) 2025-09-09T23:50:37,606 traceback.print_exc() 2025-09-09T23:50:37,606 sys.exit(1) 2025-09-09T23:50:37,606 2025-09-09T23:50:37,606 __file__ = %r 2025-09-09T23:50:37,606 sys.argv[0] = __file__ 2025-09-09T23:50:37,606 2025-09-09T23:50:37,606 if os.path.exists(__file__): 2025-09-09T23:50:37,606 filename = __file__ 2025-09-09T23:50:37,606 with tokenize.open(__file__) as f: 2025-09-09T23:50:37,606 setup_py_code = f.read() 2025-09-09T23:50:37,606 else: 2025-09-09T23:50:37,606 filename = "" 2025-09-09T23:50:37,606 setup_py_code = "from setuptools import setup; setup()" 2025-09-09T23:50:37,606 2025-09-09T23:50:37,606 exec(compile(setup_py_code, filename, "exec")) 2025-09-09T23:50:37,606 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-ke22rrnf[/] 2025-09-09T23:50:37,606 [bold magenta]cwd[/]: /tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/ 2025-09-09T23:50:37,607 Building wheel for plink (setup.py): finished with status 'error' 2025-09-09T23:50:37,607 ERROR: Failed building wheel for plink 2025-09-09T23:50:37,608 Running setup.py clean for plink 2025-09-09T23:50:37,609 Running command python setup.py clean 2025-09-09T23:50:38,138 /tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py:2: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81. 2025-09-09T23:50:38,138 from pkg_resources import load_entry_point 2025-09-09T23:50:39,021 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-09T23:50:39,021 !! 2025-09-09T23:50:39,022 ******************************************************************************** 2025-09-09T23:50:39,022 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-09T23:50:39,022 License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+) 2025-09-09T23:50:39,022 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-09T23:50:39,022 ******************************************************************************** 2025-09-09T23:50:39,022 !! 2025-09-09T23:50:39,022 self._finalize_license_expression() 2025-09-09T23:50:39,022 usage: setup.py [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] 2025-09-09T23:50:39,023 or: setup.py --help [cmd1 cmd2 ...] 2025-09-09T23:50:39,023 or: setup.py --help-commands 2025-09-09T23:50:39,023 or: setup.py cmd --help 2025-09-09T23:50:39,023 error: option --all not recognized 2025-09-09T23:50:39,142 ERROR: python setup.py clean exited with 1 2025-09-09T23:50:39,147 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-09T23:50:39,147 exec(compile('"'"''"'"''"'"' 2025-09-09T23:50:39,147 # This is -- a caller that pip uses to run setup.py 2025-09-09T23:50:39,147 # 2025-09-09T23:50:39,147 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-09T23:50:39,147 # import from `distutils.core` to work with newer packaging standards. 2025-09-09T23:50:39,147 # - It provides a clear error message when setuptools is not installed. 2025-09-09T23:50:39,147 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-09T23:50:39,147 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-09T23:50:39,147 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-09T23:50:39,147 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-09T23:50:39,147 import os, sys, tokenize, traceback 2025-09-09T23:50:39,147 2025-09-09T23:50:39,147 try: 2025-09-09T23:50:39,147 import setuptools 2025-09-09T23:50:39,147 except ImportError: 2025-09-09T23:50:39,147 print( 2025-09-09T23:50:39,147 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-09T23:50:39,147 "the build environment with exception:", 2025-09-09T23:50:39,147 file=sys.stderr, 2025-09-09T23:50:39,147 ) 2025-09-09T23:50:39,147 traceback.print_exc() 2025-09-09T23:50:39,147 sys.exit(1) 2025-09-09T23:50:39,147 2025-09-09T23:50:39,147 __file__ = %r 2025-09-09T23:50:39,147 sys.argv[0] = __file__ 2025-09-09T23:50:39,147 2025-09-09T23:50:39,147 if os.path.exists(__file__): 2025-09-09T23:50:39,147 filename = __file__ 2025-09-09T23:50:39,147 with tokenize.open(__file__) as f: 2025-09-09T23:50:39,147 setup_py_code = f.read() 2025-09-09T23:50:39,147 else: 2025-09-09T23:50:39,147 filename = "" 2025-09-09T23:50:39,147 setup_py_code = "from setuptools import setup; setup()" 2025-09-09T23:50:39,147 2025-09-09T23:50:39,147 exec(compile(setup_py_code, filename, "exec")) 2025-09-09T23:50:39,147 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b/setup.py'"'"',), "", "exec"))' clean --all[/] 2025-09-09T23:50:39,147 [bold magenta]cwd[/]: /tmp/pip-wheel-nlxz9j70/plink_319eb4b9937c4b92b1f4cfad019f9a6b 2025-09-09T23:50:39,148 ERROR: Failed cleaning build dir for plink 2025-09-09T23:50:39,149 Failed to build plink 2025-09-09T23:50:39,149 ERROR: Failed to build one or more wheels 2025-09-09T23:50:39,150 Exception information: 2025-09-09T23:50:39,150 Traceback (most recent call last): 2025-09-09T23:50:39,150 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-09T23:50:39,150 status = _inner_run() 2025-09-09T23:50:39,150 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-09T23:50:39,150 return self.run(options, args) 2025-09-09T23:50:39,150 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-09T23:50:39,150 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-09T23:50:39,150 return func(self, options, args) 2025-09-09T23:50:39,150 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-09T23:50:39,150 raise CommandError("Failed to build one or more wheels") 2025-09-09T23:50:39,150 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-09T23:50:39,154 Removed build tracker: '/tmp/pip-build-tracker-uhj4d5l4'