2025-09-10T01:08:28,265 Created temporary directory: /tmp/pip-build-tracker-hvhlp6vc
2025-09-10T01:08:28,266 Initialized build tracking at /tmp/pip-build-tracker-hvhlp6vc
2025-09-10T01:08:28,266 Created build tracker: /tmp/pip-build-tracker-hvhlp6vc
2025-09-10T01:08:28,266 Entered build tracker: /tmp/pip-build-tracker-hvhlp6vc
2025-09-10T01:08:28,266 Created temporary directory: /tmp/pip-wheel-7174yvdn
2025-09-10T01:08:28,269 Created temporary directory: /tmp/pip-ephem-wheel-cache-02ah2_l6
2025-09-10T01:08:28,325 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-09-10T01:08:28,328 2 location(s) to search for versions of repair-seq:
2025-09-10T01:08:28,328 * https://pypi.org/simple/repair-seq/
2025-09-10T01:08:28,328 * https://www.piwheels.org/simple/repair-seq/
2025-09-10T01:08:28,328 Fetching project page and analyzing links: https://pypi.org/simple/repair-seq/
2025-09-10T01:08:28,328 Getting page https://pypi.org/simple/repair-seq/
2025-09-10T01:08:28,330 Found index url https://pypi.org/simple/
2025-09-10T01:08:28,478 Fetched page https://pypi.org/simple/repair-seq/ as application/vnd.pypi.simple.v1+json
2025-09-10T01:08:28,480   Found link https://files.pythonhosted.org/packages/c4/05/0451dabc5e138dfe012fe7aeb8080e24951f88bb079c213d7f3b8be08df0/repair_seq-1.0.2.tar.gz (from https://pypi.org/simple/repair-seq/) (requires-python:>=3.6), version: 1.0.2
2025-09-10T01:08:28,482   Found link https://files.pythonhosted.org/packages/91/2b/9a0f370071e707794de9e2647dcfa2f83a07d64dd750eb29cf8bce55e738/repair_seq-1.0.3.tar.gz (from https://pypi.org/simple/repair-seq/) (requires-python:>=3.7), version: 1.0.3
2025-09-10T01:08:28,483 Fetching project page and analyzing links: https://www.piwheels.org/simple/repair-seq/
2025-09-10T01:08:28,483 Getting page https://www.piwheels.org/simple/repair-seq/
2025-09-10T01:08:28,485 Found index url https://www.piwheels.org/simple/
2025-09-10T01:08:28,581 Fetched page https://www.piwheels.org/simple/repair-seq/ as text/html
2025-09-10T01:08:28,585   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp39-cp39-linux_armv6l.whl#sha256=137466bd1946aa68c800c7f1e2ee0c6c5eb2f172e64628e3369f7e887934eaab (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2025-09-10T01:08:28,586   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp39-cp39-linux_armv7l.whl#sha256=137466bd1946aa68c800c7f1e2ee0c6c5eb2f172e64628e3369f7e887934eaab (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2025-09-10T01:08:28,586   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=92ee99fae5831b1cbf0488ecf1a8c56e0e99518c95e27d34863ad531d7cdc6a6 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2025-09-10T01:08:28,586   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=92ee99fae5831b1cbf0488ecf1a8c56e0e99518c95e27d34863ad531d7cdc6a6 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2025-09-10T01:08:28,586   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp311-cp311-linux_armv6l.whl#sha256=2ddc1b3b90d10422dd6d63b7ae21a386b66ef4f1829bc6fa2aa2e7c609e4197b (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2025-09-10T01:08:28,586   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.3-cp311-cp311-linux_armv7l.whl#sha256=2ddc1b3b90d10422dd6d63b7ae21a386b66ef4f1829bc6fa2aa2e7c609e4197b (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.7)
2025-09-10T01:08:28,586   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp311-cp311-linux_armv6l.whl#sha256=03c64f1ef45924c2b649ff9b952e56aa42df6a1263672db1e9f80bf99f7d02b1 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2025-09-10T01:08:28,587   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp311-cp311-linux_armv7l.whl#sha256=03c64f1ef45924c2b649ff9b952e56aa42df6a1263672db1e9f80bf99f7d02b1 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2025-09-10T01:08:28,587   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp37-cp37m-linux_armv6l.whl#sha256=3234e29f279366df4210cdd49f2c59263c1fc2e1284cb0f4eb70e91d6dfc0797 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2025-09-10T01:08:28,587   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp37-cp37m-linux_armv7l.whl#sha256=3234e29f279366df4210cdd49f2c59263c1fc2e1284cb0f4eb70e91d6dfc0797 (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2025-09-10T01:08:28,587   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp39-cp39-linux_armv6l.whl#sha256=77d8227261c96e181117919c2fc01cfd35b941c17c4588852e859c982c3c09aa (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2025-09-10T01:08:28,587   Skipping link: No binaries permitted for repair-seq: https://archive1.piwheels.org/simple/repair-seq/repair_seq-1.0.2-cp39-cp39-linux_armv7l.whl#sha256=77d8227261c96e181117919c2fc01cfd35b941c17c4588852e859c982c3c09aa (from https://www.piwheels.org/simple/repair-seq/) (requires-python:>=3.6)
2025-09-10T01:08:28,588 Skipping link: not a file: https://www.piwheels.org/simple/repair-seq/
2025-09-10T01:08:28,588 Skipping link: not a file: https://pypi.org/simple/repair-seq/
2025-09-10T01:08:28,613 Given no hashes to check 1 links for project 'repair-seq': discarding no candidates
2025-09-10T01:08:28,614 Collecting repair-seq==1.0.2
2025-09-10T01:08:28,616   Created temporary directory: /tmp/pip-unpack-sa4uy0lj
2025-09-10T01:08:28,761   Downloading repair_seq-1.0.2.tar.gz (936 kB)
2025-09-10T01:08:28,955   Added repair-seq==1.0.2 from https://files.pythonhosted.org/packages/c4/05/0451dabc5e138dfe012fe7aeb8080e24951f88bb079c213d7f3b8be08df0/repair_seq-1.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-hvhlp6vc'
2025-09-10T01:08:28,956   Running setup.py (path:/tmp/pip-wheel-7174yvdn/repair-seq_103abbe9c61b48009d84da00d1b45cbf/setup.py) egg_info for package repair-seq
2025-09-10T01:08:28,956   Created temporary directory: /tmp/pip-pip-egg-info-t4h3v0pm
2025-09-10T01:08:28,956   Preparing metadata (setup.py): started
2025-09-10T01:08:28,957   Running command python setup.py egg_info
2025-09-10T01:08:29,587   /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2025-09-10T01:08:29,587   !!

2025-09-10T01:08:29,587           ********************************************************************************
2025-09-10T01:08:29,587           Requirements should be satisfied by a PEP 517 installer.
2025-09-10T01:08:29,588           If you are using pip, you can try `pip install --use-pep517`.

2025-09-10T01:08:29,588           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-09-10T01:08:29,588           or your builds will no longer be supported.
2025-09-10T01:08:29,588           ********************************************************************************

2025-09-10T01:08:29,588   !!
2025-09-10T01:08:29,588     dist.fetch_build_eggs(dist.setup_requires)
2025-09-10T01:08:30,145   running egg_info
2025-09-10T01:08:30,220   creating /tmp/pip-pip-egg-info-t4h3v0pm/repair_seq.egg-info
2025-09-10T01:08:30,221   writing /tmp/pip-pip-egg-info-t4h3v0pm/repair_seq.egg-info/PKG-INFO
2025-09-10T01:08:30,222   writing dependency_links to /tmp/pip-pip-egg-info-t4h3v0pm/repair_seq.egg-info/dependency_links.txt
2025-09-10T01:08:30,223   writing requirements to /tmp/pip-pip-egg-info-t4h3v0pm/repair_seq.egg-info/requires.txt
2025-09-10T01:08:30,223   writing top-level names to /tmp/pip-pip-egg-info-t4h3v0pm/repair_seq.egg-info/top_level.txt
2025-09-10T01:08:30,223   writing manifest file '/tmp/pip-pip-egg-info-t4h3v0pm/repair_seq.egg-info/SOURCES.txt'
2025-09-10T01:08:30,602   reading manifest file '/tmp/pip-pip-egg-info-t4h3v0pm/repair_seq.egg-info/SOURCES.txt'
2025-09-10T01:08:30,605   writing manifest file '/tmp/pip-pip-egg-info-t4h3v0pm/repair_seq.egg-info/SOURCES.txt'
2025-09-10T01:08:30,719   Preparing metadata (setup.py): finished with status 'done'
2025-09-10T01:08:30,724   Source in /tmp/pip-wheel-7174yvdn/repair-seq_103abbe9c61b48009d84da00d1b45cbf has version 1.0.2, which satisfies requirement repair-seq==1.0.2 from https://files.pythonhosted.org/packages/c4/05/0451dabc5e138dfe012fe7aeb8080e24951f88bb079c213d7f3b8be08df0/repair_seq-1.0.2.tar.gz
2025-09-10T01:08:30,724   Removed repair-seq==1.0.2 from https://files.pythonhosted.org/packages/c4/05/0451dabc5e138dfe012fe7aeb8080e24951f88bb079c213d7f3b8be08df0/repair_seq-1.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-hvhlp6vc'
2025-09-10T01:08:30,730 Created temporary directory: /tmp/pip-unpack-aa0r63ag
2025-09-10T01:08:30,730 Created temporary directory: /tmp/pip-unpack-dkj3vgqw
2025-09-10T01:08:30,730 Building wheels for collected packages: repair-seq
2025-09-10T01:08:30,732   Created temporary directory: /tmp/pip-wheel-f50wgoqc
2025-09-10T01:08:30,732   DEPRECATION: Building 'repair-seq' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'repair-seq'. Discussion can be found at https://github.com/pypa/pip/issues/6334
2025-09-10T01:08:30,733   Building wheel for repair-seq (setup.py): started
2025-09-10T01:08:30,734   Destination directory: /tmp/pip-wheel-f50wgoqc
2025-09-10T01:08:30,734   Running command python setup.py bdist_wheel
2025-09-10T01:08:31,356   /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2025-09-10T01:08:31,356   !!

2025-09-10T01:08:31,357           ********************************************************************************
2025-09-10T01:08:31,357           Requirements should be satisfied by a PEP 517 installer.
2025-09-10T01:08:31,357           If you are using pip, you can try `pip install --use-pep517`.

2025-09-10T01:08:31,357           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-09-10T01:08:31,357           or your builds will no longer be supported.
2025-09-10T01:08:31,357           ********************************************************************************

2025-09-10T01:08:31,357   !!
2025-09-10T01:08:31,358     dist.fetch_build_eggs(dist.setup_requires)
2025-09-10T01:08:31,828   running bdist_wheel
2025-09-10T01:08:32,188   running build
2025-09-10T01:08:32,188   running build_py
2025-09-10T01:08:32,263   creating build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,263   copying repair_seq/statistics.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,264   copying repair_seq/single_end_experiment.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,264   copying repair_seq/replicates.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,265   copying repair_seq/quantiles.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,265   copying repair_seq/prime_editing_layout.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,266   copying repair_seq/prime_editing_experiment.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,267   copying repair_seq/pooled_screen.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,268   copying repair_seq/pooled_layout.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,269   copying repair_seq/perturb_seq.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,269   copying repair_seq/paired_end_experiment.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,270   copying repair_seq/guide_library.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,271   copying repair_seq/experiment_group.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,271   copying repair_seq/demux_gDNA.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,272   copying repair_seq/demux_for_SRA.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,272   copying repair_seq/demux_arrayed_experiments.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,273   copying repair_seq/demux.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,273   copying repair_seq/convert_outcomes.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,274   copying repair_seq/common_sequences.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,274   copying repair_seq/collapse.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,275   copying repair_seq/coherence.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,275   copying repair_seq/cluster.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,276   copying repair_seq/build_guide_specific_targets.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,277   copying repair_seq/bootstrapper.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,277   copying repair_seq/beta_binomial.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,278   copying repair_seq/base_editor.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,278   copying repair_seq/arrayed_experiment_group.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,279   copying repair_seq/__init__.py -> build/lib.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:32,281   running build_ext
2025-09-10T01:08:32,623   Compiling repair_seq/collapse_cython.pyx because it changed.
2025-09-10T01:08:32,623   [1/1] Cythonizing repair_seq/collapse_cython.pyx
2025-09-10T01:08:35,199   building 'collapse_cython' extension
2025-09-10T01:08:35,200   creating build/temp.linux-armv7l-cpython-313/repair_seq
2025-09-10T01:08:35,201   arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -I/usr/include/python3.13 -c repair_seq/collapse_cython.c -o build/temp.linux-armv7l-cpython-313/repair_seq/collapse_cython.o
2025-09-10T01:08:55,439   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/repair_seq/collapse_cython.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/repair_seq/collapse_cython.cpython-313-arm-linux-gnueabihf.so
2025-09-10T01:08:55,583   running build_scripts
2025-09-10T01:08:55,583   creating build/scripts-3.13
2025-09-10T01:08:55,583   copying and adjusting repair_seq/repair-seq -> build/scripts-3.13
2025-09-10T01:08:55,584   changing mode of build/scripts-3.13/repair-seq from 644 to 755
2025-09-10T01:08:55,662   /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2025-09-10T01:08:55,662   !!

2025-09-10T01:08:55,662           ********************************************************************************
2025-09-10T01:08:55,662           Please avoid running ``setup.py`` directly.
2025-09-10T01:08:55,662           Instead, use pypa/build, pypa/installer or other
2025-09-10T01:08:55,662           standards-based tools.

2025-09-10T01:08:55,662           By 2025-Oct-31, you need to update your project and remove deprecated calls
2025-09-10T01:08:55,663           or your builds will no longer be supported.

2025-09-10T01:08:55,663           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2025-09-10T01:08:55,663           ********************************************************************************

2025-09-10T01:08:55,663   !!
2025-09-10T01:08:55,663     self.initialize_options()
2025-09-10T01:08:55,735   installing to build/bdist.linux-armv7l/wheel
2025-09-10T01:08:55,735   running install
2025-09-10T01:08:55,758   running install_lib
2025-09-10T01:08:55,831   creating build/bdist.linux-armv7l/wheel
2025-09-10T01:08:55,831   creating build/bdist.linux-armv7l/wheel/repair_seq
2025-09-10T01:08:55,832   copying build/lib.linux-armv7l-cpython-313/repair_seq/collapse_cython.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,836   copying build/lib.linux-armv7l-cpython-313/repair_seq/__init__.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,836   copying build/lib.linux-armv7l-cpython-313/repair_seq/arrayed_experiment_group.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,837   copying build/lib.linux-armv7l-cpython-313/repair_seq/base_editor.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,837   copying build/lib.linux-armv7l-cpython-313/repair_seq/beta_binomial.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,837   copying build/lib.linux-armv7l-cpython-313/repair_seq/bootstrapper.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,838   copying build/lib.linux-armv7l-cpython-313/repair_seq/build_guide_specific_targets.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,838   copying build/lib.linux-armv7l-cpython-313/repair_seq/cluster.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,839   copying build/lib.linux-armv7l-cpython-313/repair_seq/coherence.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,839   copying build/lib.linux-armv7l-cpython-313/repair_seq/collapse.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,840   copying build/lib.linux-armv7l-cpython-313/repair_seq/common_sequences.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,840   copying build/lib.linux-armv7l-cpython-313/repair_seq/convert_outcomes.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,840   copying build/lib.linux-armv7l-cpython-313/repair_seq/demux.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,841   copying build/lib.linux-armv7l-cpython-313/repair_seq/demux_arrayed_experiments.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,841   copying build/lib.linux-armv7l-cpython-313/repair_seq/demux_for_SRA.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,842   copying build/lib.linux-armv7l-cpython-313/repair_seq/demux_gDNA.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,842   copying build/lib.linux-armv7l-cpython-313/repair_seq/experiment_group.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,842   copying build/lib.linux-armv7l-cpython-313/repair_seq/guide_library.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,843   copying build/lib.linux-armv7l-cpython-313/repair_seq/paired_end_experiment.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,843   copying build/lib.linux-armv7l-cpython-313/repair_seq/perturb_seq.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,844   copying build/lib.linux-armv7l-cpython-313/repair_seq/pooled_layout.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,844   copying build/lib.linux-armv7l-cpython-313/repair_seq/pooled_screen.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,845   copying build/lib.linux-armv7l-cpython-313/repair_seq/prime_editing_experiment.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,846   copying build/lib.linux-armv7l-cpython-313/repair_seq/prime_editing_layout.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,846   copying build/lib.linux-armv7l-cpython-313/repair_seq/quantiles.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,847   copying build/lib.linux-armv7l-cpython-313/repair_seq/replicates.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,847   copying build/lib.linux-armv7l-cpython-313/repair_seq/single_end_experiment.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,848   copying build/lib.linux-armv7l-cpython-313/repair_seq/statistics.py -> build/bdist.linux-armv7l/wheel/./repair_seq
2025-09-10T01:08:55,848   running install_egg_info
2025-09-10T01:08:55,924   running egg_info
2025-09-10T01:08:55,997   writing repair_seq.egg-info/PKG-INFO
2025-09-10T01:08:55,998   writing dependency_links to repair_seq.egg-info/dependency_links.txt
2025-09-10T01:08:55,999   writing requirements to repair_seq.egg-info/requires.txt
2025-09-10T01:08:55,999   writing top-level names to repair_seq.egg-info/top_level.txt
2025-09-10T01:08:56,076   reading manifest file 'repair_seq.egg-info/SOURCES.txt'
2025-09-10T01:08:56,085   writing manifest file 'repair_seq.egg-info/SOURCES.txt'
2025-09-10T01:08:56,085   Copying repair_seq.egg-info to build/bdist.linux-armv7l/wheel/./repair_seq-1.0.2-py3.13.egg-info
2025-09-10T01:08:56,087   running install_scripts
2025-09-10T01:08:56,088   creating build/bdist.linux-armv7l/wheel/repair_seq-1.0.2.data/scripts
2025-09-10T01:08:56,088   copying build/scripts-3.13/repair-seq -> build/bdist.linux-armv7l/wheel/repair_seq-1.0.2.data/scripts
2025-09-10T01:08:56,088   changing mode of build/bdist.linux-armv7l/wheel/repair_seq-1.0.2.data/scripts/repair-seq to 755
2025-09-10T01:08:56,138   creating build/bdist.linux-armv7l/wheel/repair_seq-1.0.2.dist-info/WHEEL
2025-09-10T01:08:56,139   creating '/tmp/pip-wheel-f50wgoqc/repair_seq-1.0.2-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-09-10T01:08:56,140   adding 'repair_seq/__init__.py'
2025-09-10T01:08:56,143   adding 'repair_seq/arrayed_experiment_group.py'
2025-09-10T01:08:56,144   adding 'repair_seq/base_editor.py'
2025-09-10T01:08:56,145   adding 'repair_seq/beta_binomial.py'
2025-09-10T01:08:56,146   adding 'repair_seq/bootstrapper.py'
2025-09-10T01:08:56,147   adding 'repair_seq/build_guide_specific_targets.py'
2025-09-10T01:08:56,150   adding 'repair_seq/cluster.py'
2025-09-10T01:08:56,151   adding 'repair_seq/coherence.py'
2025-09-10T01:08:56,152   adding 'repair_seq/collapse.py'
2025-09-10T01:08:56,368   adding 'repair_seq/collapse_cython.cpython-313-arm-linux-gnueabihf.so'
2025-09-10T01:08:56,375   adding 'repair_seq/common_sequences.py'
2025-09-10T01:08:56,376   adding 'repair_seq/convert_outcomes.py'
2025-09-10T01:08:56,378   adding 'repair_seq/demux.py'
2025-09-10T01:08:56,379   adding 'repair_seq/demux_arrayed_experiments.py'
2025-09-10T01:08:56,380   adding 'repair_seq/demux_for_SRA.py'
2025-09-10T01:08:56,382   adding 'repair_seq/demux_gDNA.py'
2025-09-10T01:08:56,384   adding 'repair_seq/experiment_group.py'
2025-09-10T01:08:56,385   adding 'repair_seq/guide_library.py'
2025-09-10T01:08:56,385   adding 'repair_seq/paired_end_experiment.py'
2025-09-10T01:08:56,387   adding 'repair_seq/perturb_seq.py'
2025-09-10T01:08:56,398   adding 'repair_seq/pooled_layout.py'
2025-09-10T01:08:56,410   adding 'repair_seq/pooled_screen.py'
2025-09-10T01:08:56,412   adding 'repair_seq/prime_editing_experiment.py'
2025-09-10T01:08:56,422   adding 'repair_seq/prime_editing_layout.py'
2025-09-10T01:08:56,423   adding 'repair_seq/quantiles.py'
2025-09-10T01:08:56,426   adding 'repair_seq/replicates.py'
2025-09-10T01:08:56,427   adding 'repair_seq/single_end_experiment.py'
2025-09-10T01:08:56,428   adding 'repair_seq/statistics.py'
2025-09-10T01:08:56,429   adding 'repair_seq-1.0.2.data/scripts/repair-seq'
2025-09-10T01:08:56,430   adding 'repair_seq-1.0.2.dist-info/METADATA'
2025-09-10T01:08:56,430   adding 'repair_seq-1.0.2.dist-info/WHEEL'
2025-09-10T01:08:56,431   adding 'repair_seq-1.0.2.dist-info/top_level.txt'
2025-09-10T01:08:56,431   adding 'repair_seq-1.0.2.dist-info/RECORD'
2025-09-10T01:08:56,432   removing build/bdist.linux-armv7l/wheel
2025-09-10T01:08:56,866   Building wheel for repair-seq (setup.py): finished with status 'done'
2025-09-10T01:08:56,873   Created wheel for repair-seq: filename=repair_seq-1.0.2-cp313-cp313-linux_armv7l.whl size=536551 sha256=1c6236083bb0b3750f5db5aced40ca91cff9f0566e19edd2c24f22b514f1e8fa
2025-09-10T01:08:56,874   Stored in directory: /tmp/pip-ephem-wheel-cache-02ah2_l6/wheels/25/09/9f/42871adeb5ba9764b99443e54a88a13d8f48b124e978d0b8ca
2025-09-10T01:08:56,883 Successfully built repair-seq
2025-09-10T01:08:56,886 Removed build tracker: '/tmp/pip-build-tracker-hvhlp6vc'