2025-09-10T03:44:26,787 Created temporary directory: /tmp/pip-build-tracker-x7t32l73 2025-09-10T03:44:26,787 Initialized build tracking at /tmp/pip-build-tracker-x7t32l73 2025-09-10T03:44:26,788 Created build tracker: /tmp/pip-build-tracker-x7t32l73 2025-09-10T03:44:26,788 Entered build tracker: /tmp/pip-build-tracker-x7t32l73 2025-09-10T03:44:26,788 Created temporary directory: /tmp/pip-wheel-f_6s2gu2 2025-09-10T03:44:26,791 Created temporary directory: /tmp/pip-ephem-wheel-cache-6gsh9fqh 2025-09-10T03:44:26,849 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-10T03:44:26,852 2 location(s) to search for versions of crossy: 2025-09-10T03:44:26,852 * https://pypi.org/simple/crossy/ 2025-09-10T03:44:26,852 * https://www.piwheels.org/simple/crossy/ 2025-09-10T03:44:26,852 Fetching project page and analyzing links: https://pypi.org/simple/crossy/ 2025-09-10T03:44:26,852 Getting page https://pypi.org/simple/crossy/ 2025-09-10T03:44:26,853 Found index url https://pypi.org/simple/ 2025-09-10T03:44:27,003 Fetched page https://pypi.org/simple/crossy/ as application/vnd.pypi.simple.v1+json 2025-09-10T03:44:27,004 Skipping link: No binaries permitted for crossy: https://files.pythonhosted.org/packages/f4/d2/4a3dff8b86521e314404ae51865969d191d20de4d9965c38ea029f5e8984/crossy-0.0.1-py3-none-any.whl (from https://pypi.org/simple/crossy/) 2025-09-10T03:44:27,005 Found link https://files.pythonhosted.org/packages/2f/22/8c17a9131a79927510e6977e13638daed706bb44eca9535b026bf856c447/crossy-0.0.1.tar.gz (from https://pypi.org/simple/crossy/), version: 0.0.1 2025-09-10T03:44:27,006 Fetching project page and analyzing links: https://www.piwheels.org/simple/crossy/ 2025-09-10T03:44:27,006 Getting page https://www.piwheels.org/simple/crossy/ 2025-09-10T03:44:27,008 Found index url https://www.piwheels.org/simple/ 2025-09-10T03:44:27,107 Fetched page https://www.piwheels.org/simple/crossy/ as text/html 2025-09-10T03:44:27,108 Skipping link: not a file: https://www.piwheels.org/simple/crossy/ 2025-09-10T03:44:27,108 Skipping link: not a file: https://pypi.org/simple/crossy/ 2025-09-10T03:44:27,133 Given no hashes to check 1 links for project 'crossy': discarding no candidates 2025-09-10T03:44:27,134 Collecting crossy==0.0.1 2025-09-10T03:44:27,136 Created temporary directory: /tmp/pip-unpack-llq9iocp 2025-09-10T03:44:27,286 Downloading crossy-0.0.1.tar.gz (3.1 kB) 2025-09-10T03:44:27,310 Added crossy==0.0.1 from https://files.pythonhosted.org/packages/2f/22/8c17a9131a79927510e6977e13638daed706bb44eca9535b026bf856c447/crossy-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-x7t32l73' 2025-09-10T03:44:27,311 Running setup.py (path:/tmp/pip-wheel-f_6s2gu2/crossy_5dc031902e7b4b0588e09876c4b72937/setup.py) egg_info for package crossy 2025-09-10T03:44:27,311 Created temporary directory: /tmp/pip-pip-egg-info-l7yp7wlt 2025-09-10T03:44:27,311 Preparing metadata (setup.py): started 2025-09-10T03:44:27,312 Running command python setup.py egg_info 2025-09-10T03:44:27,823 Traceback (most recent call last): 2025-09-10T03:44:27,825 File "", line 2, in 2025-09-10T03:44:27,825 exec(compile(''' 2025-09-10T03:44:27,825 ~~~~^^^^^^^^^^^^ 2025-09-10T03:44:27,825 # This is -- a caller that pip uses to run setup.py 2025-09-10T03:44:27,825 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,825 ...<32 lines>... 2025-09-10T03:44:27,826 exec(compile(setup_py_code, filename, "exec")) 2025-09-10T03:44:27,826 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,826 ''' % ('/tmp/pip-wheel-f_6s2gu2/crossy_5dc031902e7b4b0588e09876c4b72937/setup.py',), "", "exec")) 2025-09-10T03:44:27,826 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,826 File "", line 35, in 2025-09-10T03:44:27,826 File "/tmp/pip-wheel-f_6s2gu2/crossy_5dc031902e7b4b0588e09876c4b72937/setup.py", line 5, in 2025-09-10T03:44:27,826 from crossy import __version__ 2025-09-10T03:44:27,827 File "/tmp/pip-wheel-f_6s2gu2/crossy_5dc031902e7b4b0588e09876c4b72937/crossy/__init__.py", line 2, in 2025-09-10T03:44:27,827 from .classes import MRNA, Codon, Substitution 2025-09-10T03:44:27,827 File "/tmp/pip-wheel-f_6s2gu2/crossy_5dc031902e7b4b0588e09876c4b72937/crossy/classes.py", line 7, in 2025-09-10T03:44:27,827 import pandas as pd 2025-09-10T03:44:27,827 ModuleNotFoundError: No module named 'pandas' 2025-09-10T03:44:27,910 ERROR: python setup.py egg_info exited with 1 2025-09-10T03:44:27,922 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-10T03:44:27,922 exec(compile('"'"''"'"''"'"' 2025-09-10T03:44:27,922 # This is -- a caller that pip uses to run setup.py 2025-09-10T03:44:27,922 # 2025-09-10T03:44:27,922 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-10T03:44:27,922 # import from `distutils.core` to work with newer packaging standards. 2025-09-10T03:44:27,922 # - It provides a clear error message when setuptools is not installed. 2025-09-10T03:44:27,922 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-10T03:44:27,922 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-10T03:44:27,922 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-10T03:44:27,922 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-10T03:44:27,922 import os, sys, tokenize, traceback 2025-09-10T03:44:27,922 2025-09-10T03:44:27,922 try: 2025-09-10T03:44:27,922 import setuptools 2025-09-10T03:44:27,922 except ImportError: 2025-09-10T03:44:27,922 print( 2025-09-10T03:44:27,922 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-10T03:44:27,922 "the build environment with exception:", 2025-09-10T03:44:27,922 file=sys.stderr, 2025-09-10T03:44:27,922 ) 2025-09-10T03:44:27,922 traceback.print_exc() 2025-09-10T03:44:27,922 sys.exit(1) 2025-09-10T03:44:27,922 2025-09-10T03:44:27,922 __file__ = %r 2025-09-10T03:44:27,922 sys.argv[0] = __file__ 2025-09-10T03:44:27,922 2025-09-10T03:44:27,922 if os.path.exists(__file__): 2025-09-10T03:44:27,922 filename = __file__ 2025-09-10T03:44:27,922 with tokenize.open(__file__) as f: 2025-09-10T03:44:27,922 setup_py_code = f.read() 2025-09-10T03:44:27,922 else: 2025-09-10T03:44:27,922 filename = "" 2025-09-10T03:44:27,922 setup_py_code = "from setuptools import setup; setup()" 2025-09-10T03:44:27,922 2025-09-10T03:44:27,922 exec(compile(setup_py_code, filename, "exec")) 2025-09-10T03:44:27,922 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-f_6s2gu2/crossy_5dc031902e7b4b0588e09876c4b72937/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-l7yp7wlt[/] 2025-09-10T03:44:27,922 [bold magenta]cwd[/]: /tmp/pip-wheel-f_6s2gu2/crossy_5dc031902e7b4b0588e09876c4b72937/ 2025-09-10T03:44:27,922 Preparing metadata (setup.py): finished with status 'error' 2025-09-10T03:44:27,923 ERROR: metadata generation failed 2025-09-10T03:44:27,928 Exception information: 2025-09-10T03:44:27,928 Traceback (most recent call last): 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-10T03:44:27,928 call_subprocess( 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~^ 2025-09-10T03:44:27,928 args, 2025-09-10T03:44:27,928 ^^^^^ 2025-09-10T03:44:27,928 ...<2 lines>... 2025-09-10T03:44:27,928 spinner=spinner, 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 ) 2025-09-10T03:44:27,928 ^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-10T03:44:27,928 raise error 2025-09-10T03:44:27,928 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-10T03:44:27,928 2025-09-10T03:44:27,928 The above exception was the direct cause of the following exception: 2025-09-10T03:44:27,928 2025-09-10T03:44:27,928 Traceback (most recent call last): 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-10T03:44:27,928 status = _inner_run() 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-10T03:44:27,928 return self.run(options, args) 2025-09-10T03:44:27,928 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-10T03:44:27,928 return func(self, options, args) 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-10T03:44:27,928 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-10T03:44:27,928 result = self._result = resolver.resolve( 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~^ 2025-09-10T03:44:27,928 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 ) 2025-09-10T03:44:27,928 ^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-10T03:44:27,928 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-10T03:44:27,928 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-10T03:44:27,928 if not criterion.candidates: 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-10T03:44:27,928 return bool(self._sequence) 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-10T03:44:27,928 self._bool = any(self) 2025-09-10T03:44:27,928 ~~~^^^^^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-10T03:44:27,928 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-10T03:44:27,928 ^^^^^^^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-10T03:44:27,928 candidate = func() 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-10T03:44:27,928 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-10T03:44:27,928 link, template, name, version 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 ) 2025-09-10T03:44:27,928 ^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-10T03:44:27,928 self._link_candidate_cache[link] = LinkCandidate( 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~^ 2025-09-10T03:44:27,928 link, 2025-09-10T03:44:27,928 ^^^^^ 2025-09-10T03:44:27,928 ...<3 lines>... 2025-09-10T03:44:27,928 version=version, 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 ) 2025-09-10T03:44:27,928 ^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-10T03:44:27,928 super().__init__( 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~^ 2025-09-10T03:44:27,928 link=link, 2025-09-10T03:44:27,928 ^^^^^^^^^^ 2025-09-10T03:44:27,928 ...<4 lines>... 2025-09-10T03:44:27,928 version=version, 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 ) 2025-09-10T03:44:27,928 ^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-10T03:44:27,928 self.dist = self._prepare() 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-10T03:44:27,928 dist = self._prepare_distribution() 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-10T03:44:27,928 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-10T03:44:27,928 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-10T03:44:27,928 dist = _get_prepared_distribution( 2025-09-10T03:44:27,928 req, 2025-09-10T03:44:27,928 ...<3 lines>... 2025-09-10T03:44:27,928 self.check_build_deps, 2025-09-10T03:44:27,928 ) 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-10T03:44:27,928 abstract_dist.prepare_distribution_metadata( 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-10T03:44:27,928 finder, build_isolation, check_build_deps 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 ) 2025-09-10T03:44:27,928 ^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-10T03:44:27,928 self.req.prepare_metadata() 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-10T03:44:27,928 self.metadata_directory = generate_metadata_legacy( 2025-09-10T03:44:27,928 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-10T03:44:27,928 build_env=self.build_env, 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 ...<3 lines>... 2025-09-10T03:44:27,928 details=details, 2025-09-10T03:44:27,928 ^^^^^^^^^^^^^^^^ 2025-09-10T03:44:27,928 ) 2025-09-10T03:44:27,928 ^ 2025-09-10T03:44:27,928 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-10T03:44:27,928 raise MetadataGenerationFailed(package_details=details) from error 2025-09-10T03:44:27,928 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-10T03:44:27,950 Removed crossy==0.0.1 from https://files.pythonhosted.org/packages/2f/22/8c17a9131a79927510e6977e13638daed706bb44eca9535b026bf856c447/crossy-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-x7t32l73' 2025-09-10T03:44:27,951 Removed build tracker: '/tmp/pip-build-tracker-x7t32l73'