2025-09-11T05:21:36,748 Created temporary directory: /tmp/pip-build-tracker-scehdx1s 2025-09-11T05:21:36,749 Initialized build tracking at /tmp/pip-build-tracker-scehdx1s 2025-09-11T05:21:36,749 Created build tracker: /tmp/pip-build-tracker-scehdx1s 2025-09-11T05:21:36,749 Entered build tracker: /tmp/pip-build-tracker-scehdx1s 2025-09-11T05:21:36,750 Created temporary directory: /tmp/pip-wheel-f9ex9bk0 2025-09-11T05:21:36,753 Created temporary directory: /tmp/pip-ephem-wheel-cache-t12tn9wp 2025-09-11T05:21:36,818 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-11T05:21:36,820 2 location(s) to search for versions of dscribe: 2025-09-11T05:21:36,820 * https://pypi.org/simple/dscribe/ 2025-09-11T05:21:36,820 * https://www.piwheels.org/simple/dscribe/ 2025-09-11T05:21:36,820 Fetching project page and analyzing links: https://pypi.org/simple/dscribe/ 2025-09-11T05:21:36,821 Getting page https://pypi.org/simple/dscribe/ 2025-09-11T05:21:36,822 Found index 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https://files.pythonhosted.org/packages/fe/c7/ea3c8bf8738728e3db8932c9877d7e7ce618f34e6eaf9d891277689eb62c/dscribe-0.2.9.tar.gz (from https://pypi.org/simple/dscribe/) (requires-python:>=3.5), version: 0.2.9 2025-09-11T05:21:37,003 Found link https://files.pythonhosted.org/packages/b8/13/ff23825ac17f99e3a25756a9e2b256dcf278b2dad983f2d4c16206645255/dscribe-0.3.2.tar.gz (from https://pypi.org/simple/dscribe/) (requires-python:>=3.5), version: 0.3.2 2025-09-11T05:21:37,003 Found link https://files.pythonhosted.org/packages/e7/ad/5dc5f9f8344a764c8126bbcaf7a2ae1ee502a72aae3fcbbbff494b0089e4/dscribe-0.3.4.tar.gz (from https://pypi.org/simple/dscribe/) (requires-python:>=3.5), version: 0.3.4 2025-09-11T05:21:37,003 Found link https://files.pythonhosted.org/packages/e8/a3/257088a8f0760177a7b9398d7235c044bb2c54319ce34558df50a06450cd/dscribe-0.3.5.tar.gz (from https://pypi.org/simple/dscribe/) (requires-python:>=3.5), version: 0.3.5 2025-09-11T05:21:37,003 Found link 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https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.8-cp34-cp34m-linux_armv6l.whl#sha256=d995444bb246e7f7b3ae4f01d4328356b4c9ae2714aebd879a31a31bb99c3129 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,220 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.8-cp35-cp35m-linux_armv7l.whl#sha256=87032c111d7bb11bfbfef2a9ff368e640daea4f8fbb35dc5bdc5541a8612a8b4 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,220 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.8-cp35-cp35m-linux_armv6l.whl#sha256=87032c111d7bb11bfbfef2a9ff368e640daea4f8fbb35dc5bdc5541a8612a8b4 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,220 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.5-cp37-cp37m-linux_armv6l.whl#sha256=e87452dfa0a39f80a0d379970a54f9bae8fe6ca3d2515be11a4e966bbe46d41d (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,220 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.5-cp37-cp37m-linux_armv7l.whl#sha256=e87452dfa0a39f80a0d379970a54f9bae8fe6ca3d2515be11a4e966bbe46d41d (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,220 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.5-cp34-cp34m-linux_armv6l.whl#sha256=ceada3f22a1a9502d996f7da5ceffaa6c49dd8a68305b92cc8074fadd1dabbe1 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,220 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.5-cp34-cp34m-linux_armv7l.whl#sha256=ceada3f22a1a9502d996f7da5ceffaa6c49dd8a68305b92cc8074fadd1dabbe1 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,220 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.5-cp35-cp35m-linux_armv6l.whl#sha256=799dc2181bd10fc154c982a4081974bf0241e13949c90405483a1ea0777c6a20 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,221 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.5-cp35-cp35m-linux_armv7l.whl#sha256=799dc2181bd10fc154c982a4081974bf0241e13949c90405483a1ea0777c6a20 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,221 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.4-cp37-cp37m-linux_armv7l.whl#sha256=e439387cce96ba60b6f45cad988e8f39da5bfeec86c453859e00ccf838003a79 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,221 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.4-cp37-cp37m-linux_armv6l.whl#sha256=e439387cce96ba60b6f45cad988e8f39da5bfeec86c453859e00ccf838003a79 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,221 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.4-cp35-cp35m-linux_armv7l.whl#sha256=2735f707b8c5db49fa30f4f04519f961d3e4b4f624373e0ddefa7de7c86de8e1 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,221 Skipping link: No binaries permitted for dscribe: https://archive1.piwheels.org/simple/dscribe/dscribe-0.1.4-cp35-cp35m-linux_armv6l.whl#sha256=2735f707b8c5db49fa30f4f04519f961d3e4b4f624373e0ddefa7de7c86de8e1 (from https://www.piwheels.org/simple/dscribe/) (requires-python:>=2.6, <4) 2025-09-11T05:21:37,221 Skipping link: not a file: https://www.piwheels.org/simple/dscribe/ 2025-09-11T05:21:37,221 Skipping link: not a file: https://pypi.org/simple/dscribe/ 2025-09-11T05:21:37,248 Given no hashes to check 1 links for project 'dscribe': discarding no candidates 2025-09-11T05:21:37,249 Collecting dscribe==1.2.2 2025-09-11T05:21:37,251 Created temporary directory: /tmp/pip-unpack-n1ee_auq 2025-09-11T05:21:37,314 Downloading dscribe-1.2.2.tar.gz (1.2 MB) 2025-09-11T05:21:37,939 Added dscribe==1.2.2 from https://files.pythonhosted.org/packages/db/9a/19c1779dc56b2192ed14b108d6302a57744ba981062f50c908474bbb1ab9/dscribe-1.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-scehdx1s' 2025-09-11T05:21:37,941 Running setup.py (path:/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/setup.py) egg_info for package dscribe 2025-09-11T05:21:37,941 Created temporary directory: /tmp/pip-pip-egg-info-6v29mwx7 2025-09-11T05:21:37,942 Preparing metadata (setup.py): started 2025-09-11T05:21:37,943 Running command python setup.py egg_info 2025-09-11T05:21:38,731 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-11T05:21:38,731 !! 2025-09-11T05:21:38,731 ******************************************************************************** 2025-09-11T05:21:38,731 Requirements should be satisfied by a PEP 517 installer. 2025-09-11T05:21:38,731 If you are using pip, you can try `pip install --use-pep517`. 2025-09-11T05:21:38,732 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-11T05:21:38,732 or your builds will no longer be supported. 2025-09-11T05:21:38,732 ******************************************************************************** 2025-09-11T05:21:38,732 !! 2025-09-11T05:21:38,732 dist.fetch_build_eggs(dist.setup_requires) 2025-09-11T05:21:42,181 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-11T05:21:42,181 !! 2025-09-11T05:21:42,181 ******************************************************************************** 2025-09-11T05:21:42,182 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-11T05:21:42,182 License :: OSI Approved :: Apache Software License 2025-09-11T05:21:42,182 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-11T05:21:42,182 ******************************************************************************** 2025-09-11T05:21:42,182 !! 2025-09-11T05:21:42,183 self._finalize_license_expression() 2025-09-11T05:21:42,268 running egg_info 2025-09-11T05:21:42,358 creating /tmp/pip-pip-egg-info-6v29mwx7/dscribe.egg-info 2025-09-11T05:21:42,358 writing /tmp/pip-pip-egg-info-6v29mwx7/dscribe.egg-info/PKG-INFO 2025-09-11T05:21:42,359 writing dependency_links to /tmp/pip-pip-egg-info-6v29mwx7/dscribe.egg-info/dependency_links.txt 2025-09-11T05:21:42,360 writing requirements to /tmp/pip-pip-egg-info-6v29mwx7/dscribe.egg-info/requires.txt 2025-09-11T05:21:42,361 writing top-level names to /tmp/pip-pip-egg-info-6v29mwx7/dscribe.egg-info/top_level.txt 2025-09-11T05:21:42,361 writing manifest file '/tmp/pip-pip-egg-info-6v29mwx7/dscribe.egg-info/SOURCES.txt' 2025-09-11T05:21:42,723 reading manifest file '/tmp/pip-pip-egg-info-6v29mwx7/dscribe.egg-info/SOURCES.txt' 2025-09-11T05:21:42,724 reading manifest template 'MANIFEST.in' 2025-09-11T05:21:42,755 adding license file 'LICENSE' 2025-09-11T05:21:42,768 writing manifest file '/tmp/pip-pip-egg-info-6v29mwx7/dscribe.egg-info/SOURCES.txt' 2025-09-11T05:21:42,903 Preparing metadata (setup.py): finished with status 'done' 2025-09-11T05:21:42,908 Source in /tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421 has version 1.2.2, which satisfies requirement dscribe==1.2.2 from https://files.pythonhosted.org/packages/db/9a/19c1779dc56b2192ed14b108d6302a57744ba981062f50c908474bbb1ab9/dscribe-1.2.2.tar.gz 2025-09-11T05:21:42,909 Removed dscribe==1.2.2 from https://files.pythonhosted.org/packages/db/9a/19c1779dc56b2192ed14b108d6302a57744ba981062f50c908474bbb1ab9/dscribe-1.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-scehdx1s' 2025-09-11T05:21:42,915 Created temporary directory: /tmp/pip-unpack-l5k_47tj 2025-09-11T05:21:42,916 Created temporary directory: /tmp/pip-unpack-_2vxqm6t 2025-09-11T05:21:42,916 Building wheels for collected packages: dscribe 2025-09-11T05:21:42,917 Created temporary directory: /tmp/pip-wheel-utmc0dfj 2025-09-11T05:21:42,918 DEPRECATION: Building 'dscribe' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'dscribe'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-11T05:21:42,919 Building wheel for dscribe (setup.py): started 2025-09-11T05:21:42,920 Destination directory: /tmp/pip-wheel-utmc0dfj 2025-09-11T05:21:42,920 Running command python setup.py bdist_wheel 2025-09-11T05:21:43,602 /usr/local/lib/python3.13/dist-packages/setuptools/__init__.py:92: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2025-09-11T05:21:43,602 !! 2025-09-11T05:21:43,603 ******************************************************************************** 2025-09-11T05:21:43,603 Requirements should be satisfied by a PEP 517 installer. 2025-09-11T05:21:43,603 If you are using pip, you can try `pip install --use-pep517`. 2025-09-11T05:21:43,603 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-11T05:21:43,603 or your builds will no longer be supported. 2025-09-11T05:21:43,603 ******************************************************************************** 2025-09-11T05:21:43,604 !! 2025-09-11T05:21:43,604 dist.fetch_build_eggs(dist.setup_requires) 2025-09-11T05:21:44,544 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-11T05:21:44,545 !! 2025-09-11T05:21:44,545 ******************************************************************************** 2025-09-11T05:21:44,545 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-11T05:21:44,545 License :: OSI Approved :: Apache Software License 2025-09-11T05:21:44,545 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-11T05:21:44,546 ******************************************************************************** 2025-09-11T05:21:44,546 !! 2025-09-11T05:21:44,546 self._finalize_license_expression() 2025-09-11T05:21:44,546 running bdist_wheel 2025-09-11T05:21:44,987 running build 2025-09-11T05:21:44,988 running build_py 2025-09-11T05:21:45,079 creating build/lib.linux-armv7l-cpython-313/dscribe 2025-09-11T05:21:45,080 copying dscribe/__init__.py -> build/lib.linux-armv7l-cpython-313/dscribe 2025-09-11T05:21:45,081 creating build/lib.linux-armv7l-cpython-313/dscribe/utils 2025-09-11T05:21:45,082 copying dscribe/utils/stats.py -> build/lib.linux-armv7l-cpython-313/dscribe/utils 2025-09-11T05:21:45,083 copying dscribe/utils/species.py -> build/lib.linux-armv7l-cpython-313/dscribe/utils 2025-09-11T05:21:45,084 copying dscribe/utils/geometry.py -> build/lib.linux-armv7l-cpython-313/dscribe/utils 2025-09-11T05:21:45,085 copying dscribe/utils/dimensionality.py -> build/lib.linux-armv7l-cpython-313/dscribe/utils 2025-09-11T05:21:45,086 copying dscribe/utils/__init__.py -> build/lib.linux-armv7l-cpython-313/dscribe/utils 2025-09-11T05:21:45,087 creating build/lib.linux-armv7l-cpython-313/dscribe/kernels 2025-09-11T05:21:45,088 copying dscribe/kernels/rematchkernel.py -> build/lib.linux-armv7l-cpython-313/dscribe/kernels 2025-09-11T05:21:45,089 copying dscribe/kernels/localsimilaritykernel.py -> build/lib.linux-armv7l-cpython-313/dscribe/kernels 2025-09-11T05:21:45,090 copying dscribe/kernels/averagekernel.py -> build/lib.linux-armv7l-cpython-313/dscribe/kernels 2025-09-11T05:21:45,091 copying dscribe/kernels/__init__.py -> build/lib.linux-armv7l-cpython-313/dscribe/kernels 2025-09-11T05:21:45,092 creating build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,093 copying dscribe/descriptors/valleoganov.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,094 copying dscribe/descriptors/soap.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,095 copying dscribe/descriptors/sinematrix.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,096 copying dscribe/descriptors/mbtr.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,097 copying dscribe/descriptors/matrixdescriptor.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,098 copying dscribe/descriptors/lmbtr.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,099 copying dscribe/descriptors/ewaldsummatrix.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,100 copying dscribe/descriptors/descriptor.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,102 copying dscribe/descriptors/coulombmatrix.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,103 copying dscribe/descriptors/acsf.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,104 copying dscribe/descriptors/__init__.py -> build/lib.linux-armv7l-cpython-313/dscribe/descriptors 2025-09-11T05:21:45,105 creating build/lib.linux-armv7l-cpython-313/dscribe/core 2025-09-11T05:21:45,106 copying dscribe/core/system.py -> build/lib.linux-armv7l-cpython-313/dscribe/core 2025-09-11T05:21:45,107 copying dscribe/core/lattice.py -> build/lib.linux-armv7l-cpython-313/dscribe/core 2025-09-11T05:21:45,108 copying dscribe/core/__init__.py -> build/lib.linux-armv7l-cpython-313/dscribe/core 2025-09-11T05:21:45,108 running egg_info 2025-09-11T05:21:45,197 writing dscribe.egg-info/PKG-INFO 2025-09-11T05:21:45,199 writing dependency_links to dscribe.egg-info/dependency_links.txt 2025-09-11T05:21:45,200 writing requirements to dscribe.egg-info/requires.txt 2025-09-11T05:21:45,200 writing top-level names to dscribe.egg-info/top_level.txt 2025-09-11T05:21:45,293 reading manifest file 'dscribe.egg-info/SOURCES.txt' 2025-09-11T05:21:45,318 reading manifest template 'MANIFEST.in' 2025-09-11T05:21:45,349 adding license file 'LICENSE' 2025-09-11T05:21:45,368 writing manifest file 'dscribe.egg-info/SOURCES.txt' 2025-09-11T05:21:45,381 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'dscribe.ext' is absent from the `packages` configuration. 2025-09-11T05:21:45,382 !! 2025-09-11T05:21:45,382 ******************************************************************************** 2025-09-11T05:21:45,382 ############################ 2025-09-11T05:21:45,382 # Package would be ignored # 2025-09-11T05:21:45,383 ############################ 2025-09-11T05:21:45,383 Python recognizes 'dscribe.ext' as an importable package[^1], 2025-09-11T05:21:45,383 but it is absent from setuptools' `packages` configuration. 2025-09-11T05:21:45,383 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-11T05:21:45,383 package, please make sure that 'dscribe.ext' is explicitly added 2025-09-11T05:21:45,384 to the `packages` configuration field. 2025-09-11T05:21:45,384 Alternatively, you can also rely on setuptools' discovery methods 2025-09-11T05:21:45,384 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-11T05:21:45,384 instead of `find_packages(...)`/`find:`). 2025-09-11T05:21:45,384 You can read more about "package discovery" on setuptools documentation page: 2025-09-11T05:21:45,384 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-11T05:21:45,385 If you don't want 'dscribe.ext' to be distributed and are 2025-09-11T05:21:45,385 already explicitly excluding 'dscribe.ext' via 2025-09-11T05:21:45,385 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-11T05:21:45,385 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-11T05:21:45,385 combination with a more fine grained `package-data` configuration. 2025-09-11T05:21:45,385 You can read more about "package data files" on setuptools documentation page: 2025-09-11T05:21:45,385 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-11T05:21:45,386 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-11T05:21:45,386 even if it does not contain any `.py` files. 2025-09-11T05:21:45,386 On the other hand, currently there is no concept of package data 2025-09-11T05:21:45,386 directory, all directories are treated like packages. 2025-09-11T05:21:45,386 ******************************************************************************** 2025-09-11T05:21:45,386 !! 2025-09-11T05:21:45,386 check.warn(importable) 2025-09-11T05:21:45,387 creating build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,387 copying dscribe/ext/acsf.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,388 copying dscribe/ext/acsf.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,388 copying dscribe/ext/celllist.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,389 copying dscribe/ext/celllist.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,390 copying dscribe/ext/cm.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,391 copying dscribe/ext/cm.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,391 copying dscribe/ext/descriptor.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,392 copying dscribe/ext/descriptor.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,393 copying dscribe/ext/descriptorglobal.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,394 copying dscribe/ext/descriptorglobal.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,394 copying dscribe/ext/ext.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,395 copying dscribe/ext/geometry.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,396 copying dscribe/ext/geometry.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,396 copying dscribe/ext/mbtr.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,397 copying dscribe/ext/mbtr.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,398 copying dscribe/ext/soap.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,399 copying dscribe/ext/soap.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,399 copying dscribe/ext/soapGTO.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,402 copying dscribe/ext/soapGTO.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,403 copying dscribe/ext/soapGeneral.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,404 copying dscribe/ext/soapGeneral.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,404 copying dscribe/ext/weighting.cpp -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,405 copying dscribe/ext/weighting.h -> build/lib.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,407 running build_ext 2025-09-11T05:21:45,761 building 'dscribe.ext' extension 2025-09-11T05:21:45,768 creating build/temp.linux-armv7l-cpython-313/dscribe/ext 2025-09-11T05:21:45,770 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/acsf.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/acsf.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:21:50,943 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/celllist.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/celllist.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:22:02,925 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/cm.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/cm.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:22:50,956 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/descriptor.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/descriptor.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:23:29,321 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/descriptorglobal.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/descriptorglobal.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:24:04,558 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/ext.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/ext.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:25:28,444 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/geometry.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/geometry.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:26:04,647 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/mbtr.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/mbtr.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:26:15,714 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/soap.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/soap.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:26:52,582 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/soapGTO.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/soapGTO.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:29:53,725 dscribe/ext/soapGTO.cpp: In function ‘void soapGTO(pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, double, double, int, int, double, pybind11::dict, bool, std::string, pybind11::array_t, bool, bool, CellList)’: 2025-09-11T05:29:53,725 dscribe/ext/soapGTO.cpp:2473:19: warning: ‘prCofDX’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-11T05:29:53,725 2473 | getCfactorsD(preCoef, prCofDX, prCofDY, prCofDZ, n_neighbours, dx,x2, x4, x6, x8,x10,x12,x14,x16,x18, dy,y2, y4, y6, y8,y10,y12,y14,y16,y18, dz, z2, z4, z6, z8,z10,z12,z14,z16,z18, r2, r4, r6, r8,r10,r12,r14,r16,r18,r20, x20,y20,z20, totalAN, lMax, return_derivatives); 2025-09-11T05:29:53,725 | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-11T05:29:53,726 dscribe/ext/soapGTO.cpp:2405:11: note: ‘prCofDX’ was declared here 2025-09-11T05:29:53,726 2405 | double* prCofDX; 2025-09-11T05:29:53,726 | ^~~~~~~ 2025-09-11T05:29:53,727 dscribe/ext/soapGTO.cpp:2473:19: warning: ‘prCofDY’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-11T05:29:53,727 2473 | getCfactorsD(preCoef, prCofDX, prCofDY, prCofDZ, n_neighbours, dx,x2, x4, x6, x8,x10,x12,x14,x16,x18, dy,y2, y4, y6, y8,y10,y12,y14,y16,y18, dz, z2, z4, z6, z8,z10,z12,z14,z16,z18, r2, r4, r6, r8,r10,r12,r14,r16,r18,r20, x20,y20,z20, totalAN, lMax, return_derivatives); 2025-09-11T05:29:53,727 | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-11T05:29:53,727 dscribe/ext/soapGTO.cpp:2406:11: note: ‘prCofDY’ was declared here 2025-09-11T05:29:53,727 2406 | double* prCofDY; 2025-09-11T05:29:53,728 | ^~~~~~~ 2025-09-11T05:29:53,728 dscribe/ext/soapGTO.cpp:2473:19: warning: ‘prCofDZ’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-11T05:29:53,728 2473 | getCfactorsD(preCoef, prCofDX, prCofDY, prCofDZ, n_neighbours, dx,x2, x4, x6, x8,x10,x12,x14,x16,x18, dy,y2, y4, y6, y8,y10,y12,y14,y16,y18, dz, z2, z4, z6, z8,z10,z12,z14,z16,z18, r2, r4, r6, r8,r10,r12,r14,r16,r18,r20, x20,y20,z20, totalAN, lMax, return_derivatives); 2025-09-11T05:29:53,729 | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2025-09-11T05:29:53,729 dscribe/ext/soapGTO.cpp:2407:11: note: ‘prCofDZ’ was declared here 2025-09-11T05:29:53,729 2407 | double* prCofDZ; 2025-09-11T05:29:53,729 | ^~~~~~~ 2025-09-11T05:29:53,730 dscribe/ext/soapGTO.cpp:2518:19: warning: ‘cnnd_ave_raw’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-11T05:29:53,730 2518 | delete [] cnnd_ave_raw; 2025-09-11T05:29:53,730 | ^~~~~~~~~~~~ 2025-09-11T05:29:53,730 dscribe/ext/soapGTO.cpp:2422:11: note: ‘cnnd_ave_raw’ was declared here 2025-09-11T05:29:53,730 2422 | double* cnnd_ave_raw; 2025-09-11T05:29:53,731 | ^~~~~~~~~~~~ 2025-09-11T05:29:53,748 dscribe/ext/soapGTO.cpp:2486:56: warning: ‘void free(void*)’ called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] 2025-09-11T05:29:53,748 2486 | free(exes); free(preCoef); free(bOa); free(aOa); free(cnnd_raw); free(weights); 2025-09-11T05:29:53,748 | ~~~~^~~~~~~~~~ 2025-09-11T05:29:53,749 dscribe/ext/soapGTO.cpp:2420:52: note: returned from ‘void* operator new [](std::size_t)’ 2025-09-11T05:29:53,749 2420 | double* cnnd_raw = new double[nCenters*n_coeffs](); 2025-09-11T05:29:53,749 | ^ 2025-09-11T05:30:11,110 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/soapGeneral.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/soapGeneral.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:30:55,174 dscribe/ext/soapGeneral.cpp: In function ‘double legendre_poly(int, int, double)’: 2025-09-11T05:30:55,174 dscribe/ext/soapGeneral.cpp:1635:20: warning: ‘pll’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-11T05:30:55,174 1635 | return pll; 2025-09-11T05:30:55,174 | ^~~ 2025-09-11T05:30:55,174 dscribe/ext/soapGeneral.cpp:1604:17: note: ‘pll’ was declared here 2025-09-11T05:30:55,175 1604 | double fact,pll,pmm,pmmp1,somx2; 2025-09-11T05:30:55,175 | ^~~ 2025-09-11T05:31:01,988 dscribe/ext/soapGeneral.cpp: In function ‘void soapGeneral(pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, pybind11::array_t, double, double, int, int, double, pybind11::dict, pybind11::array_t, pybind11::array_t, bool, std::string, CellList)’: 2025-09-11T05:31:01,988 dscribe/ext/soapGeneral.cpp:1858:13: warning: ‘CsAve’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-11T05:31:01,988 1858 | double* CsAve; 2025-09-11T05:31:01,988 | ^~~~~ 2025-09-11T05:31:02,002 dscribe/ext/soapGeneral.cpp:1946:13: warning: ‘void free(void*)’ called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] 2025-09-11T05:31:02,002 1946 | free(PsTemp); 2025-09-11T05:31:02,003 | ~~~~^~~~~~~~ 2025-09-11T05:31:02,003 dscribe/ext/soapGeneral.cpp:1934:49: note: returned from ‘void* operator new [](std::size_t)’ 2025-09-11T05:31:02,003 1934 | double* PsTemp = new double[nFeatures*Hs]; 2025-09-11T05:31:02,003 | ^ 2025-09-11T05:31:17,491 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -Idependencies/eigen -Idscribe/ext -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/tmp/pip-wheel-f9ex9bk0/dscribe_062d4db6ec9745c7b9461f95a622f421/.eggs/pybind11-3.0.1-py3.13.egg/pybind11/include -I/usr/include/python3.13 -c dscribe/ext/weighting.cpp -o build/temp.linux-armv7l-cpython-313/dscribe/ext/weighting.o -std=c++11 -O3 "-I dependencies/eigen/Eigen/" -fvisibility=hidden 2025-09-11T05:31:46,045 arm-linux-gnueabihf-g++ -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-313/dscribe/ext/acsf.o build/temp.linux-armv7l-cpython-313/dscribe/ext/celllist.o build/temp.linux-armv7l-cpython-313/dscribe/ext/cm.o build/temp.linux-armv7l-cpython-313/dscribe/ext/descriptor.o build/temp.linux-armv7l-cpython-313/dscribe/ext/descriptorglobal.o build/temp.linux-armv7l-cpython-313/dscribe/ext/ext.o build/temp.linux-armv7l-cpython-313/dscribe/ext/geometry.o build/temp.linux-armv7l-cpython-313/dscribe/ext/mbtr.o build/temp.linux-armv7l-cpython-313/dscribe/ext/soap.o build/temp.linux-armv7l-cpython-313/dscribe/ext/soapGTO.o build/temp.linux-armv7l-cpython-313/dscribe/ext/soapGeneral.o build/temp.linux-armv7l-cpython-313/dscribe/ext/weighting.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/dscribe/ext.cpython-313-arm-linux-gnueabihf.so 2025-09-11T05:31:47,956 /usr/local/lib/python3.13/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-11T05:31:47,956 !! 2025-09-11T05:31:47,956 ******************************************************************************** 2025-09-11T05:31:47,956 Please avoid running ``setup.py`` directly. 2025-09-11T05:31:47,956 Instead, use pypa/build, pypa/installer or other 2025-09-11T05:31:47,957 standards-based tools. 2025-09-11T05:31:47,957 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-11T05:31:47,957 or your builds will no longer be supported. 2025-09-11T05:31:47,957 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-11T05:31:47,957 ******************************************************************************** 2025-09-11T05:31:47,957 !! 2025-09-11T05:31:47,957 self.initialize_options() 2025-09-11T05:31:48,043 installing to build/bdist.linux-armv7l/wheel 2025-09-11T05:31:48,043 running install 2025-09-11T05:31:48,068 running install_lib 2025-09-11T05:31:48,155 creating build/bdist.linux-armv7l/wheel 2025-09-11T05:31:48,156 creating build/bdist.linux-armv7l/wheel/dscribe 2025-09-11T05:31:48,156 copying build/lib.linux-armv7l-cpython-313/dscribe/ext.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./dscribe 2025-09-11T05:31:48,285 creating build/bdist.linux-armv7l/wheel/dscribe/ext 2025-09-11T05:31:48,286 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/weighting.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,287 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/weighting.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,288 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/soapGeneral.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,288 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/soapGeneral.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,289 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/soapGTO.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,290 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/soapGTO.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,293 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/soap.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,293 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/soap.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,294 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/mbtr.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,295 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/mbtr.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,296 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/geometry.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,297 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/geometry.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,298 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/ext.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,298 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/descriptorglobal.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,299 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/descriptorglobal.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,300 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/descriptor.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,301 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/descriptor.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,301 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/cm.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,302 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/cm.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,303 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/celllist.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,304 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/celllist.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,305 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/acsf.h -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,305 copying build/lib.linux-armv7l-cpython-313/dscribe/ext/acsf.cpp -> build/bdist.linux-armv7l/wheel/./dscribe/ext 2025-09-11T05:31:48,306 creating build/bdist.linux-armv7l/wheel/dscribe/core 2025-09-11T05:31:48,307 copying build/lib.linux-armv7l-cpython-313/dscribe/core/__init__.py -> build/bdist.linux-armv7l/wheel/./dscribe/core 2025-09-11T05:31:48,308 copying build/lib.linux-armv7l-cpython-313/dscribe/core/lattice.py -> build/bdist.linux-armv7l/wheel/./dscribe/core 2025-09-11T05:31:48,309 copying build/lib.linux-armv7l-cpython-313/dscribe/core/system.py -> build/bdist.linux-armv7l/wheel/./dscribe/core 2025-09-11T05:31:48,310 creating build/bdist.linux-armv7l/wheel/dscribe/descriptors 2025-09-11T05:31:48,310 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/__init__.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,311 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/acsf.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,312 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/coulombmatrix.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,313 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/descriptor.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,314 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/ewaldsummatrix.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,314 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/lmbtr.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,315 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/matrixdescriptor.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,316 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/mbtr.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,317 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/sinematrix.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,318 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/soap.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,319 copying build/lib.linux-armv7l-cpython-313/dscribe/descriptors/valleoganov.py -> build/bdist.linux-armv7l/wheel/./dscribe/descriptors 2025-09-11T05:31:48,320 creating build/bdist.linux-armv7l/wheel/dscribe/kernels 2025-09-11T05:31:48,320 copying build/lib.linux-armv7l-cpython-313/dscribe/kernels/__init__.py -> build/bdist.linux-armv7l/wheel/./dscribe/kernels 2025-09-11T05:31:48,321 copying build/lib.linux-armv7l-cpython-313/dscribe/kernels/averagekernel.py -> build/bdist.linux-armv7l/wheel/./dscribe/kernels 2025-09-11T05:31:48,322 copying build/lib.linux-armv7l-cpython-313/dscribe/kernels/localsimilaritykernel.py -> build/bdist.linux-armv7l/wheel/./dscribe/kernels 2025-09-11T05:31:48,322 copying build/lib.linux-armv7l-cpython-313/dscribe/kernels/rematchkernel.py -> build/bdist.linux-armv7l/wheel/./dscribe/kernels 2025-09-11T05:31:48,323 creating build/bdist.linux-armv7l/wheel/dscribe/utils 2025-09-11T05:31:48,324 copying build/lib.linux-armv7l-cpython-313/dscribe/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./dscribe/utils 2025-09-11T05:31:48,325 copying build/lib.linux-armv7l-cpython-313/dscribe/utils/dimensionality.py -> build/bdist.linux-armv7l/wheel/./dscribe/utils 2025-09-11T05:31:48,326 copying build/lib.linux-armv7l-cpython-313/dscribe/utils/geometry.py -> build/bdist.linux-armv7l/wheel/./dscribe/utils 2025-09-11T05:31:48,326 copying build/lib.linux-armv7l-cpython-313/dscribe/utils/species.py -> build/bdist.linux-armv7l/wheel/./dscribe/utils 2025-09-11T05:31:48,327 copying build/lib.linux-armv7l-cpython-313/dscribe/utils/stats.py -> build/bdist.linux-armv7l/wheel/./dscribe/utils 2025-09-11T05:31:48,328 copying build/lib.linux-armv7l-cpython-313/dscribe/__init__.py -> build/bdist.linux-armv7l/wheel/./dscribe 2025-09-11T05:31:48,329 running install_egg_info 2025-09-11T05:31:48,421 Copying dscribe.egg-info to build/bdist.linux-armv7l/wheel/./dscribe-1.2.2-py3.13.egg-info 2025-09-11T05:31:48,424 running install_scripts 2025-09-11T05:31:48,484 creating build/bdist.linux-armv7l/wheel/dscribe-1.2.2.dist-info/WHEEL 2025-09-11T05:31:48,485 creating '/tmp/pip-wheel-utmc0dfj/dscribe-1.2.2-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-11T05:31:48,487 adding 'dscribe/__init__.py' 2025-09-11T05:31:53,608 adding 'dscribe/ext.cpython-313-arm-linux-gnueabihf.so' 2025-09-11T05:31:53,822 adding 'dscribe/core/__init__.py' 2025-09-11T05:31:53,823 adding 'dscribe/core/lattice.py' 2025-09-11T05:31:53,825 adding 'dscribe/core/system.py' 2025-09-11T05:31:53,826 adding 'dscribe/descriptors/__init__.py' 2025-09-11T05:31:53,828 adding 'dscribe/descriptors/acsf.py' 2025-09-11T05:31:53,830 adding 'dscribe/descriptors/coulombmatrix.py' 2025-09-11T05:31:53,833 adding 'dscribe/descriptors/descriptor.py' 2025-09-11T05:31:53,835 adding 'dscribe/descriptors/ewaldsummatrix.py' 2025-09-11T05:31:53,840 adding 'dscribe/descriptors/lmbtr.py' 2025-09-11T05:31:53,841 adding 'dscribe/descriptors/matrixdescriptor.py' 2025-09-11T05:31:53,846 adding 'dscribe/descriptors/mbtr.py' 2025-09-11T05:31:53,847 adding 'dscribe/descriptors/sinematrix.py' 2025-09-11T05:31:53,853 adding 'dscribe/descriptors/soap.py' 2025-09-11T05:31:53,855 adding 'dscribe/descriptors/valleoganov.py' 2025-09-11T05:31:53,856 adding 'dscribe/ext/acsf.cpp' 2025-09-11T05:31:53,857 adding 'dscribe/ext/acsf.h' 2025-09-11T05:31:53,859 adding 'dscribe/ext/celllist.cpp' 2025-09-11T05:31:53,860 adding 'dscribe/ext/celllist.h' 2025-09-11T05:31:53,862 adding 'dscribe/ext/cm.cpp' 2025-09-11T05:31:53,863 adding 'dscribe/ext/cm.h' 2025-09-11T05:31:53,865 adding 'dscribe/ext/descriptor.cpp' 2025-09-11T05:31:53,866 adding 'dscribe/ext/descriptor.h' 2025-09-11T05:31:53,867 adding 'dscribe/ext/descriptorglobal.cpp' 2025-09-11T05:31:53,869 adding 'dscribe/ext/descriptorglobal.h' 2025-09-11T05:31:53,870 adding 'dscribe/ext/ext.cpp' 2025-09-11T05:31:53,872 adding 'dscribe/ext/geometry.cpp' 2025-09-11T05:31:53,873 adding 'dscribe/ext/geometry.h' 2025-09-11T05:31:53,875 adding 'dscribe/ext/mbtr.cpp' 2025-09-11T05:31:53,877 adding 'dscribe/ext/mbtr.h' 2025-09-11T05:31:53,878 adding 'dscribe/ext/soap.cpp' 2025-09-11T05:31:53,880 adding 'dscribe/ext/soap.h' 2025-09-11T05:31:53,911 adding 'dscribe/ext/soapGTO.cpp' 2025-09-11T05:31:53,915 adding 'dscribe/ext/soapGTO.h' 2025-09-11T05:31:53,920 adding 'dscribe/ext/soapGeneral.cpp' 2025-09-11T05:31:53,922 adding 'dscribe/ext/soapGeneral.h' 2025-09-11T05:31:53,923 adding 'dscribe/ext/weighting.cpp' 2025-09-11T05:31:53,924 adding 'dscribe/ext/weighting.h' 2025-09-11T05:31:53,925 adding 'dscribe/kernels/__init__.py' 2025-09-11T05:31:53,927 adding 'dscribe/kernels/averagekernel.py' 2025-09-11T05:31:53,928 adding 'dscribe/kernels/localsimilaritykernel.py' 2025-09-11T05:31:53,930 adding 'dscribe/kernels/rematchkernel.py' 2025-09-11T05:31:53,931 adding 'dscribe/utils/__init__.py' 2025-09-11T05:31:53,932 adding 'dscribe/utils/dimensionality.py' 2025-09-11T05:31:53,934 adding 'dscribe/utils/geometry.py' 2025-09-11T05:31:53,935 adding 'dscribe/utils/species.py' 2025-09-11T05:31:53,936 adding 'dscribe/utils/stats.py' 2025-09-11T05:31:53,939 adding 'dscribe-1.2.2.dist-info/licenses/LICENSE' 2025-09-11T05:31:53,940 adding 'dscribe-1.2.2.dist-info/METADATA' 2025-09-11T05:31:53,941 adding 'dscribe-1.2.2.dist-info/WHEEL' 2025-09-11T05:31:53,942 adding 'dscribe-1.2.2.dist-info/top_level.txt' 2025-09-11T05:31:53,943 adding 'dscribe-1.2.2.dist-info/RECORD' 2025-09-11T05:31:53,944 removing build/bdist.linux-armv7l/wheel 2025-09-11T05:31:54,127 Building wheel for dscribe (setup.py): finished with status 'done' 2025-09-11T05:31:54,237 Created wheel for dscribe: filename=dscribe-1.2.2-cp313-cp313-linux_armv7l.whl size=10497057 sha256=3ce3de69714edbc2ab1e00a767e82aa267cebfc7a5019741d5a4b8e3fd3ccd3d 2025-09-11T05:31:54,238 Stored in directory: /tmp/pip-ephem-wheel-cache-t12tn9wp/wheels/04/f2/65/9d1afe1550566f60ccf9c8a6f5c6a99d763c8f97e4f44b1276 2025-09-11T05:31:54,249 Successfully built dscribe 2025-09-11T05:31:54,273 Removed build tracker: '/tmp/pip-build-tracker-scehdx1s'