2025-09-13T00:54:10,214 Created temporary directory: /tmp/pip-build-tracker-pbebjcrz 2025-09-13T00:54:10,215 Initialized build tracking at /tmp/pip-build-tracker-pbebjcrz 2025-09-13T00:54:10,215 Created build tracker: /tmp/pip-build-tracker-pbebjcrz 2025-09-13T00:54:10,215 Entered build tracker: /tmp/pip-build-tracker-pbebjcrz 2025-09-13T00:54:10,215 Created temporary directory: /tmp/pip-wheel-xe7w_dwp 2025-09-13T00:54:10,219 Created temporary directory: /tmp/pip-ephem-wheel-cache-mbyrrvfn 2025-09-13T00:54:10,282 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-13T00:54:10,285 2 location(s) to search for versions of seldompy: 2025-09-13T00:54:10,285 * https://pypi.org/simple/seldompy/ 2025-09-13T00:54:10,285 * https://www.piwheels.org/simple/seldompy/ 2025-09-13T00:54:10,286 Fetching project page and analyzing links: https://pypi.org/simple/seldompy/ 2025-09-13T00:54:10,286 Getting page https://pypi.org/simple/seldompy/ 2025-09-13T00:54:10,288 Found index url https://pypi.org/simple/ 2025-09-13T00:54:10,368 Fetched page https://pypi.org/simple/seldompy/ as application/vnd.pypi.simple.v1+json 2025-09-13T00:54:10,370 Skipping link: No binaries permitted for seldompy: https://files.pythonhosted.org/packages/15/1e/e2ffb54d95eb04e2c11dd109754fe19e290c4a9ab4e2bf2a57159a503d92/SELDOMpy-0.9.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/seldompy/) 2025-09-13T00:54:10,370 Found link https://files.pythonhosted.org/packages/e0/c2/eba2f28b595340f8c4010ea35a809f50d6b8bace971105cf2300bbbc0ce7/SELDOMpy-0.9.8.tar.gz (from https://pypi.org/simple/seldompy/), version: 0.9.8 2025-09-13T00:54:10,371 Skipping link: No binaries permitted for seldompy: https://files.pythonhosted.org/packages/cf/fd/55148fcbd4b491569b925910992a7dbfb4cf630ee94833bee16e50f9e330/SELDOMpy-0.9.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/seldompy/) 2025-09-13T00:54:10,371 Found link https://files.pythonhosted.org/packages/00/23/70aa2c3b7b7acaec975e9932bd8c6f75c84068615791d7ec9e8d050db099/SELDOMpy-0.9.9.tar.gz (from https://pypi.org/simple/seldompy/), version: 0.9.9 2025-09-13T00:54:10,371 Skipping link: No binaries permitted for seldompy: https://files.pythonhosted.org/packages/cb/fd/951ae4a46031bbbf8524e54e3d416b1b1485eef99d01efccc8bed8d19443/SELDOMpy-1.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/seldompy/) 2025-09-13T00:54:10,371 Found link https://files.pythonhosted.org/packages/ed/8c/d56a9dc40587ae6bfce50954f024f71864d3fe9604d0c4200cc5704f5688/SELDOMpy-1.0.tar.gz (from https://pypi.org/simple/seldompy/), version: 1.0 2025-09-13T00:54:10,372 Fetching project page and analyzing links: https://www.piwheels.org/simple/seldompy/ 2025-09-13T00:54:10,372 Getting page https://www.piwheels.org/simple/seldompy/ 2025-09-13T00:54:10,373 Found index url https://www.piwheels.org/simple/ 2025-09-13T00:54:10,655 Fetched page https://www.piwheels.org/simple/seldompy/ as text/html 2025-09-13T00:54:10,656 Skipping link: not a file: https://www.piwheels.org/simple/seldompy/ 2025-09-13T00:54:10,657 Skipping link: not a file: https://pypi.org/simple/seldompy/ 2025-09-13T00:54:10,682 Given no hashes to check 1 links for project 'seldompy': discarding no candidates 2025-09-13T00:54:10,683 Collecting seldompy==1.0 2025-09-13T00:54:10,685 Created temporary directory: /tmp/pip-unpack-rajhx15v 2025-09-13T00:54:10,988 Downloading SELDOMpy-1.0.tar.gz (260 kB) 2025-09-13T00:54:11,176 Added seldompy==1.0 from https://files.pythonhosted.org/packages/ed/8c/d56a9dc40587ae6bfce50954f024f71864d3fe9604d0c4200cc5704f5688/SELDOMpy-1.0.tar.gz to build tracker '/tmp/pip-build-tracker-pbebjcrz' 2025-09-13T00:54:11,177 Running setup.py (path:/tmp/pip-wheel-xe7w_dwp/seldompy_57a6628934cf4b5187c4dbf73288252f/setup.py) egg_info for package seldompy 2025-09-13T00:54:11,177 Created temporary directory: /tmp/pip-pip-egg-info-gzegt9ie 2025-09-13T00:54:11,178 Preparing metadata (setup.py): started 2025-09-13T00:54:11,179 Running command python setup.py egg_info 2025-09-13T00:54:12,242 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-13T00:54:12,242 !! 2025-09-13T00:54:12,243 ******************************************************************************** 2025-09-13T00:54:12,243 Usage of dash-separated 'description-file' will not be supported in future 2025-09-13T00:54:12,243 versions. Please use the underscore name 'description_file' instead. 2025-09-13T00:54:12,243 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-13T00:54:12,243 or your builds will no longer be supported. 2025-09-13T00:54:12,243 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-13T00:54:12,243 ******************************************************************************** 2025-09-13T00:54:12,244 !! 2025-09-13T00:54:12,244 opt = self._enforce_underscore(opt, section) 2025-09-13T00:54:12,771 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-13T00:54:12,772 !! 2025-09-13T00:54:12,772 ******************************************************************************** 2025-09-13T00:54:12,772 Usage of dash-separated 'description-file' will not be supported in future 2025-09-13T00:54:12,772 versions. Please use the underscore name 'description_file' instead. 2025-09-13T00:54:12,772 (Affected: SELDOMpy). 2025-09-13T00:54:12,772 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-13T00:54:12,773 or your builds will no longer be supported. 2025-09-13T00:54:12,773 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-13T00:54:12,773 ******************************************************************************** 2025-09-13T00:54:12,773 !! 2025-09-13T00:54:12,773 opt = self._enforce_underscore(opt, section) 2025-09-13T00:54:12,774 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-13T00:54:12,774 !! 2025-09-13T00:54:12,774 ******************************************************************************** 2025-09-13T00:54:12,774 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-13T00:54:12,775 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-09-13T00:54:12,775 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-13T00:54:12,775 ******************************************************************************** 2025-09-13T00:54:12,775 !! 2025-09-13T00:54:12,776 self._finalize_license_expression() 2025-09-13T00:54:12,859 running egg_info 2025-09-13T00:54:12,946 creating /tmp/pip-pip-egg-info-gzegt9ie/SELDOMpy.egg-info 2025-09-13T00:54:12,947 writing /tmp/pip-pip-egg-info-gzegt9ie/SELDOMpy.egg-info/PKG-INFO 2025-09-13T00:54:12,948 writing dependency_links to /tmp/pip-pip-egg-info-gzegt9ie/SELDOMpy.egg-info/dependency_links.txt 2025-09-13T00:54:12,949 writing requirements to /tmp/pip-pip-egg-info-gzegt9ie/SELDOMpy.egg-info/requires.txt 2025-09-13T00:54:12,949 writing top-level names to /tmp/pip-pip-egg-info-gzegt9ie/SELDOMpy.egg-info/top_level.txt 2025-09-13T00:54:12,950 writing manifest file '/tmp/pip-pip-egg-info-gzegt9ie/SELDOMpy.egg-info/SOURCES.txt' 2025-09-13T00:54:13,299 reading manifest file '/tmp/pip-pip-egg-info-gzegt9ie/SELDOMpy.egg-info/SOURCES.txt' 2025-09-13T00:54:13,299 reading manifest template 'MANIFEST.in' 2025-09-13T00:54:13,304 adding license file 'LICENSE.txt' 2025-09-13T00:54:13,309 writing manifest file '/tmp/pip-pip-egg-info-gzegt9ie/SELDOMpy.egg-info/SOURCES.txt' 2025-09-13T00:54:13,467 Preparing metadata (setup.py): finished with status 'done' 2025-09-13T00:54:13,472 Source in /tmp/pip-wheel-xe7w_dwp/seldompy_57a6628934cf4b5187c4dbf73288252f has version 1.0, which satisfies requirement seldompy==1.0 from https://files.pythonhosted.org/packages/ed/8c/d56a9dc40587ae6bfce50954f024f71864d3fe9604d0c4200cc5704f5688/SELDOMpy-1.0.tar.gz 2025-09-13T00:54:13,472 Removed seldompy==1.0 from https://files.pythonhosted.org/packages/ed/8c/d56a9dc40587ae6bfce50954f024f71864d3fe9604d0c4200cc5704f5688/SELDOMpy-1.0.tar.gz from build tracker '/tmp/pip-build-tracker-pbebjcrz' 2025-09-13T00:54:13,478 Created temporary directory: /tmp/pip-unpack-2fb4qnws 2025-09-13T00:54:13,479 Created temporary directory: /tmp/pip-unpack-szgytllp 2025-09-13T00:54:13,479 Building wheels for collected packages: seldompy 2025-09-13T00:54:13,481 Created temporary directory: /tmp/pip-wheel-8_r9iwn5 2025-09-13T00:54:13,481 DEPRECATION: Building 'seldompy' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'seldompy'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-13T00:54:13,483 Building wheel for seldompy (setup.py): started 2025-09-13T00:54:13,484 Destination directory: /tmp/pip-wheel-8_r9iwn5 2025-09-13T00:54:13,484 Running command python setup.py bdist_wheel 2025-09-13T00:54:14,389 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-13T00:54:14,389 !! 2025-09-13T00:54:14,389 ******************************************************************************** 2025-09-13T00:54:14,390 Usage of dash-separated 'description-file' will not be supported in future 2025-09-13T00:54:14,390 versions. Please use the underscore name 'description_file' instead. 2025-09-13T00:54:14,390 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-13T00:54:14,390 or your builds will no longer be supported. 2025-09-13T00:54:14,390 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-13T00:54:14,391 ******************************************************************************** 2025-09-13T00:54:14,391 !! 2025-09-13T00:54:14,391 opt = self._enforce_underscore(opt, section) 2025-09-13T00:54:14,944 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-13T00:54:14,944 !! 2025-09-13T00:54:14,944 ******************************************************************************** 2025-09-13T00:54:14,944 Usage of dash-separated 'description-file' will not be supported in future 2025-09-13T00:54:14,944 versions. Please use the underscore name 'description_file' instead. 2025-09-13T00:54:14,944 (Affected: SELDOMpy). 2025-09-13T00:54:14,945 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-13T00:54:14,945 or your builds will no longer be supported. 2025-09-13T00:54:14,945 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-13T00:54:14,945 ******************************************************************************** 2025-09-13T00:54:14,945 !! 2025-09-13T00:54:14,945 opt = self._enforce_underscore(opt, section) 2025-09-13T00:54:14,947 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-13T00:54:14,947 !! 2025-09-13T00:54:14,947 ******************************************************************************** 2025-09-13T00:54:14,947 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-13T00:54:14,948 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-09-13T00:54:14,948 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-13T00:54:14,948 ******************************************************************************** 2025-09-13T00:54:14,948 !! 2025-09-13T00:54:14,948 self._finalize_license_expression() 2025-09-13T00:54:14,950 running bdist_wheel 2025-09-13T00:54:15,442 running build 2025-09-13T00:54:15,443 running build_py 2025-09-13T00:54:15,544 creating build/lib.linux-armv7l-cpython-313/SELDOMpy 2025-09-13T00:54:15,545 copying SELDOMpy/__init__.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy 2025-09-13T00:54:15,547 creating build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,548 copying SELDOMpy/src/__init__.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,549 running egg_info 2025-09-13T00:54:15,645 writing SELDOMpy.egg-info/PKG-INFO 2025-09-13T00:54:15,647 writing dependency_links to SELDOMpy.egg-info/dependency_links.txt 2025-09-13T00:54:15,649 writing requirements to SELDOMpy.egg-info/requires.txt 2025-09-13T00:54:15,649 writing top-level names to SELDOMpy.egg-info/top_level.txt 2025-09-13T00:54:15,749 reading manifest file 'SELDOMpy.egg-info/SOURCES.txt' 2025-09-13T00:54:15,760 reading manifest template 'MANIFEST.in' 2025-09-13T00:54:15,765 adding license file 'LICENSE.txt' 2025-09-13T00:54:15,773 writing manifest file 'SELDOMpy.egg-info/SOURCES.txt' 2025-09-13T00:54:15,775 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'SELDOMpy.examples.MAPK' is absent from the `packages` configuration. 2025-09-13T00:54:15,775 !! 2025-09-13T00:54:15,775 ******************************************************************************** 2025-09-13T00:54:15,775 ############################ 2025-09-13T00:54:15,775 # Package would be ignored # 2025-09-13T00:54:15,776 ############################ 2025-09-13T00:54:15,776 Python recognizes 'SELDOMpy.examples.MAPK' as an importable package[^1], 2025-09-13T00:54:15,776 but it is absent from setuptools' `packages` configuration. 2025-09-13T00:54:15,776 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-13T00:54:15,776 package, please make sure that 'SELDOMpy.examples.MAPK' is explicitly added 2025-09-13T00:54:15,776 to the `packages` configuration field. 2025-09-13T00:54:15,776 Alternatively, you can also rely on setuptools' discovery methods 2025-09-13T00:54:15,776 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-13T00:54:15,777 instead of `find_packages(...)`/`find:`). 2025-09-13T00:54:15,777 You can read more about "package discovery" on setuptools documentation page: 2025-09-13T00:54:15,777 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-13T00:54:15,777 If you don't want 'SELDOMpy.examples.MAPK' to be distributed and are 2025-09-13T00:54:15,777 already explicitly excluding 'SELDOMpy.examples.MAPK' via 2025-09-13T00:54:15,777 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-13T00:54:15,777 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-13T00:54:15,778 combination with a more fine grained `package-data` configuration. 2025-09-13T00:54:15,778 You can read more about "package data files" on setuptools documentation page: 2025-09-13T00:54:15,778 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-13T00:54:15,778 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-13T00:54:15,778 even if it does not contain any `.py` files. 2025-09-13T00:54:15,779 On the other hand, currently there is no concept of package data 2025-09-13T00:54:15,779 directory, all directories are treated like packages. 2025-09-13T00:54:15,779 ******************************************************************************** 2025-09-13T00:54:15,779 !! 2025-09-13T00:54:15,779 check.warn(importable) 2025-09-13T00:54:15,780 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'SELDOMpy.examples.SP' is absent from the `packages` configuration. 2025-09-13T00:54:15,780 !! 2025-09-13T00:54:15,780 ******************************************************************************** 2025-09-13T00:54:15,780 ############################ 2025-09-13T00:54:15,780 # Package would be ignored # 2025-09-13T00:54:15,781 ############################ 2025-09-13T00:54:15,781 Python recognizes 'SELDOMpy.examples.SP' as an importable package[^1], 2025-09-13T00:54:15,781 but it is absent from setuptools' `packages` configuration. 2025-09-13T00:54:15,781 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-13T00:54:15,781 package, please make sure that 'SELDOMpy.examples.SP' is explicitly added 2025-09-13T00:54:15,781 to the `packages` configuration field. 2025-09-13T00:54:15,781 Alternatively, you can also rely on setuptools' discovery methods 2025-09-13T00:54:15,781 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-13T00:54:15,781 instead of `find_packages(...)`/`find:`). 2025-09-13T00:54:15,782 You can read more about "package discovery" on setuptools documentation page: 2025-09-13T00:54:15,782 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-13T00:54:15,782 If you don't want 'SELDOMpy.examples.SP' to be distributed and are 2025-09-13T00:54:15,782 already explicitly excluding 'SELDOMpy.examples.SP' via 2025-09-13T00:54:15,782 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-13T00:54:15,782 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-13T00:54:15,782 combination with a more fine grained `package-data` configuration. 2025-09-13T00:54:15,783 You can read more about "package data files" on setuptools documentation page: 2025-09-13T00:54:15,783 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-13T00:54:15,783 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-13T00:54:15,783 even if it does not contain any `.py` files. 2025-09-13T00:54:15,783 On the other hand, currently there is no concept of package data 2025-09-13T00:54:15,783 directory, all directories are treated like packages. 2025-09-13T00:54:15,784 ******************************************************************************** 2025-09-13T00:54:15,784 !! 2025-09-13T00:54:15,784 check.warn(importable) 2025-09-13T00:54:15,785 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'SELDOMpy.functions' is absent from the `packages` configuration. 2025-09-13T00:54:15,785 !! 2025-09-13T00:54:15,785 ******************************************************************************** 2025-09-13T00:54:15,786 ############################ 2025-09-13T00:54:15,786 # Package would be ignored # 2025-09-13T00:54:15,786 ############################ 2025-09-13T00:54:15,786 Python recognizes 'SELDOMpy.functions' as an importable package[^1], 2025-09-13T00:54:15,786 but it is absent from setuptools' `packages` configuration. 2025-09-13T00:54:15,786 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-13T00:54:15,786 package, please make sure that 'SELDOMpy.functions' is explicitly added 2025-09-13T00:54:15,786 to the `packages` configuration field. 2025-09-13T00:54:15,786 Alternatively, you can also rely on setuptools' discovery methods 2025-09-13T00:54:15,787 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-13T00:54:15,787 instead of `find_packages(...)`/`find:`). 2025-09-13T00:54:15,787 You can read more about "package discovery" on setuptools documentation page: 2025-09-13T00:54:15,787 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-13T00:54:15,787 If you don't want 'SELDOMpy.functions' to be distributed and are 2025-09-13T00:54:15,787 already explicitly excluding 'SELDOMpy.functions' via 2025-09-13T00:54:15,787 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-13T00:54:15,787 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-13T00:54:15,788 combination with a more fine grained `package-data` configuration. 2025-09-13T00:54:15,788 You can read more about "package data files" on setuptools documentation page: 2025-09-13T00:54:15,788 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-13T00:54:15,788 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-13T00:54:15,788 even if it does not contain any `.py` files. 2025-09-13T00:54:15,788 On the other hand, currently there is no concept of package data 2025-09-13T00:54:15,788 directory, all directories are treated like packages. 2025-09-13T00:54:15,788 ******************************************************************************** 2025-09-13T00:54:15,789 !! 2025-09-13T00:54:15,789 check.warn(importable) 2025-09-13T00:54:15,789 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'SELDOMpy.src.include.include_amigo' is absent from the `packages` configuration. 2025-09-13T00:54:15,789 !! 2025-09-13T00:54:15,789 ******************************************************************************** 2025-09-13T00:54:15,789 ############################ 2025-09-13T00:54:15,789 # Package would be ignored # 2025-09-13T00:54:15,789 ############################ 2025-09-13T00:54:15,790 Python recognizes 'SELDOMpy.src.include.include_amigo' as an importable package[^1], 2025-09-13T00:54:15,790 but it is absent from setuptools' `packages` configuration. 2025-09-13T00:54:15,790 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-13T00:54:15,790 package, please make sure that 'SELDOMpy.src.include.include_amigo' is explicitly added 2025-09-13T00:54:15,790 to the `packages` configuration field. 2025-09-13T00:54:15,790 Alternatively, you can also rely on setuptools' discovery methods 2025-09-13T00:54:15,790 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-13T00:54:15,790 instead of `find_packages(...)`/`find:`). 2025-09-13T00:54:15,791 You can read more about "package discovery" on setuptools documentation page: 2025-09-13T00:54:15,791 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-13T00:54:15,791 If you don't want 'SELDOMpy.src.include.include_amigo' to be distributed and are 2025-09-13T00:54:15,791 already explicitly excluding 'SELDOMpy.src.include.include_amigo' via 2025-09-13T00:54:15,791 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-13T00:54:15,791 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-13T00:54:15,791 combination with a more fine grained `package-data` configuration. 2025-09-13T00:54:15,791 You can read more about "package data files" on setuptools documentation page: 2025-09-13T00:54:15,792 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-13T00:54:15,792 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-13T00:54:15,792 even if it does not contain any `.py` files. 2025-09-13T00:54:15,792 On the other hand, currently there is no concept of package data 2025-09-13T00:54:15,792 directory, all directories are treated like packages. 2025-09-13T00:54:15,792 ******************************************************************************** 2025-09-13T00:54:15,792 !! 2025-09-13T00:54:15,793 check.warn(importable) 2025-09-13T00:54:15,793 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'SELDOMpy.src.include.include_cvodes.cvodes' is absent from the `packages` configuration. 2025-09-13T00:54:15,793 !! 2025-09-13T00:54:15,793 ******************************************************************************** 2025-09-13T00:54:15,793 ############################ 2025-09-13T00:54:15,793 # Package would be ignored # 2025-09-13T00:54:15,793 ############################ 2025-09-13T00:54:15,793 Python recognizes 'SELDOMpy.src.include.include_cvodes.cvodes' as an importable package[^1], 2025-09-13T00:54:15,793 but it is absent from setuptools' `packages` configuration. 2025-09-13T00:54:15,794 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-13T00:54:15,794 package, please make sure that 'SELDOMpy.src.include.include_cvodes.cvodes' is explicitly added 2025-09-13T00:54:15,794 to the `packages` configuration field. 2025-09-13T00:54:15,794 Alternatively, you can also rely on setuptools' discovery methods 2025-09-13T00:54:15,794 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-13T00:54:15,794 instead of `find_packages(...)`/`find:`). 2025-09-13T00:54:15,794 You can read more about "package discovery" on setuptools documentation page: 2025-09-13T00:54:15,795 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-13T00:54:15,795 If you don't want 'SELDOMpy.src.include.include_cvodes.cvodes' to be distributed and are 2025-09-13T00:54:15,795 already explicitly excluding 'SELDOMpy.src.include.include_cvodes.cvodes' via 2025-09-13T00:54:15,795 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-13T00:54:15,795 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-13T00:54:15,795 combination with a more fine grained `package-data` configuration. 2025-09-13T00:54:15,796 You can read more about "package data files" on setuptools documentation page: 2025-09-13T00:54:15,796 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-13T00:54:15,796 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-13T00:54:15,796 even if it does not contain any `.py` files. 2025-09-13T00:54:15,796 On the other hand, currently there is no concept of package data 2025-09-13T00:54:15,796 directory, all directories are treated like packages. 2025-09-13T00:54:15,797 ******************************************************************************** 2025-09-13T00:54:15,797 !! 2025-09-13T00:54:15,797 check.warn(importable) 2025-09-13T00:54:15,797 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'SELDOMpy.src.include.include_cvodes.nvector' is absent from the `packages` configuration. 2025-09-13T00:54:15,797 !! 2025-09-13T00:54:15,797 ******************************************************************************** 2025-09-13T00:54:15,797 ############################ 2025-09-13T00:54:15,798 # Package would be ignored # 2025-09-13T00:54:15,798 ############################ 2025-09-13T00:54:15,798 Python recognizes 'SELDOMpy.src.include.include_cvodes.nvector' as an importable package[^1], 2025-09-13T00:54:15,798 but it is absent from setuptools' `packages` configuration. 2025-09-13T00:54:15,798 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-13T00:54:15,798 package, please make sure that 'SELDOMpy.src.include.include_cvodes.nvector' is explicitly added 2025-09-13T00:54:15,798 to the `packages` configuration field. 2025-09-13T00:54:15,799 Alternatively, you can also rely on setuptools' discovery methods 2025-09-13T00:54:15,799 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-13T00:54:15,799 instead of `find_packages(...)`/`find:`). 2025-09-13T00:54:15,799 You can read more about "package discovery" on setuptools documentation page: 2025-09-13T00:54:15,799 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-13T00:54:15,799 If you don't want 'SELDOMpy.src.include.include_cvodes.nvector' to be distributed and are 2025-09-13T00:54:15,799 already explicitly excluding 'SELDOMpy.src.include.include_cvodes.nvector' via 2025-09-13T00:54:15,800 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-13T00:54:15,800 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-13T00:54:15,800 combination with a more fine grained `package-data` configuration. 2025-09-13T00:54:15,800 You can read more about "package data files" on setuptools documentation page: 2025-09-13T00:54:15,800 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-13T00:54:15,800 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-13T00:54:15,801 even if it does not contain any `.py` files. 2025-09-13T00:54:15,801 On the other hand, currently there is no concept of package data 2025-09-13T00:54:15,801 directory, all directories are treated like packages. 2025-09-13T00:54:15,801 ******************************************************************************** 2025-09-13T00:54:15,801 !! 2025-09-13T00:54:15,801 check.warn(importable) 2025-09-13T00:54:15,801 /usr/local/lib/python3.13/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'SELDOMpy.src.include.include_cvodes.sundials' is absent from the `packages` configuration. 2025-09-13T00:54:15,801 !! 2025-09-13T00:54:15,802 ******************************************************************************** 2025-09-13T00:54:15,802 ############################ 2025-09-13T00:54:15,802 # Package would be ignored # 2025-09-13T00:54:15,802 ############################ 2025-09-13T00:54:15,802 Python recognizes 'SELDOMpy.src.include.include_cvodes.sundials' as an importable package[^1], 2025-09-13T00:54:15,802 but it is absent from setuptools' `packages` configuration. 2025-09-13T00:54:15,802 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-13T00:54:15,802 package, please make sure that 'SELDOMpy.src.include.include_cvodes.sundials' is explicitly added 2025-09-13T00:54:15,803 to the `packages` configuration field. 2025-09-13T00:54:15,803 Alternatively, you can also rely on setuptools' discovery methods 2025-09-13T00:54:15,803 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-13T00:54:15,803 instead of `find_packages(...)`/`find:`). 2025-09-13T00:54:15,803 You can read more about "package discovery" on setuptools documentation page: 2025-09-13T00:54:15,803 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-13T00:54:15,803 If you don't want 'SELDOMpy.src.include.include_cvodes.sundials' to be distributed and are 2025-09-13T00:54:15,804 already explicitly excluding 'SELDOMpy.src.include.include_cvodes.sundials' via 2025-09-13T00:54:15,804 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-13T00:54:15,804 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-13T00:54:15,804 combination with a more fine grained `package-data` configuration. 2025-09-13T00:54:15,804 You can read more about "package data files" on setuptools documentation page: 2025-09-13T00:54:15,804 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-13T00:54:15,805 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-13T00:54:15,805 even if it does not contain any `.py` files. 2025-09-13T00:54:15,805 On the other hand, currently there is no concept of package data 2025-09-13T00:54:15,805 directory, all directories are treated like packages. 2025-09-13T00:54:15,805 ******************************************************************************** 2025-09-13T00:54:15,805 !! 2025-09-13T00:54:15,806 check.warn(importable) 2025-09-13T00:54:15,806 creating build/lib.linux-armv7l-cpython-313/SELDOMpy/examples/MAPK 2025-09-13T00:54:15,806 copying SELDOMpy/examples/MAPK/MAPK.xlsx -> build/lib.linux-armv7l-cpython-313/SELDOMpy/examples/MAPK 2025-09-13T00:54:15,806 copying SELDOMpy/examples/MAPK/MAPK_training_and_reduce.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/examples/MAPK 2025-09-13T00:54:15,806 copying SELDOMpy/examples/MAPK/MAPK_training_and_reduce_pyPESTO.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/examples/MAPK 2025-09-13T00:54:15,806 creating build/lib.linux-armv7l-cpython-313/SELDOMpy/examples/SP 2025-09-13T00:54:15,806 copying SELDOMpy/examples/SP/SP.xlsx -> build/lib.linux-armv7l-cpython-313/SELDOMpy/examples/SP 2025-09-13T00:54:15,806 copying SELDOMpy/examples/SP/SP_training_and_reduce.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/examples/SP 2025-09-13T00:54:15,806 copying SELDOMpy/examples/SP/SP_training_and_reduce_pyPESTO.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/examples/SP 2025-09-13T00:54:15,807 creating build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,807 copying SELDOMpy/functions/buildmim.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,807 copying SELDOMpy/functions/extras.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,807 copying SELDOMpy/functions/gen_exps.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,807 copying SELDOMpy/functions/getLBODEmodel.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,807 copying SELDOMpy/functions/getRandomLBODEmodel.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,807 copying SELDOMpy/functions/optimization.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,807 copying SELDOMpy/functions/plot_results.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,807 copying SELDOMpy/functions/reduce_fun.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,808 copying SELDOMpy/functions/simulate_logic_based_ode.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,808 copying SELDOMpy/functions/simulate_logic_based_ode_obs.py -> build/lib.linux-armv7l-cpython-313/SELDOMpy/functions 2025-09-13T00:54:15,808 copying SELDOMpy/src/AMIGO_model.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,809 copying SELDOMpy/src/AMIGO_model_stats.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,810 copying SELDOMpy/src/AMIGO_problem.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,811 copying SELDOMpy/src/CNOStructure.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,811 copying SELDOMpy/src/anODEModel.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,812 copying SELDOMpy/src/cvodea.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,813 copying SELDOMpy/src/cvodea_io.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,814 copying SELDOMpy/src/cvodes.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,816 copying SELDOMpy/src/cvodes_band.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,817 copying SELDOMpy/src/cvodes_bandpre.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,818 copying SELDOMpy/src/cvodes_bandpre_impl.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,818 copying SELDOMpy/src/cvodes_bbdpre.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,819 copying SELDOMpy/src/cvodes_bbdpre_impl.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,820 copying SELDOMpy/src/cvodes_dense.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,821 copying SELDOMpy/src/cvodes_diag.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,822 copying SELDOMpy/src/cvodes_diag_impl.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,823 copying SELDOMpy/src/cvodes_direct.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,823 copying SELDOMpy/src/cvodes_direct_impl.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,824 copying SELDOMpy/src/cvodes_impl.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,825 copying SELDOMpy/src/cvodes_io.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,826 copying SELDOMpy/src/cvodes_spbcgs.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,827 copying SELDOMpy/src/cvodes_spgmr.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,828 copying SELDOMpy/src/cvodes_spils.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,828 copying SELDOMpy/src/cvodes_spils_impl.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,829 copying SELDOMpy/src/cvodes_sptfqmr.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,830 copying SELDOMpy/src/decimal2binary.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,831 copying SELDOMpy/src/dhc.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,831 copying SELDOMpy/src/findStates.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,832 copying SELDOMpy/src/fnvector_serial.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,833 copying SELDOMpy/src/fnvector_serial.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,833 copying SELDOMpy/src/getAdjacencyMatrix.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,834 copying SELDOMpy/src/getNumBits.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,834 copying SELDOMpy/src/getNumInputs.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,835 copying SELDOMpy/src/getStateIndex.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,836 copying SELDOMpy/src/getTruthTables.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,837 copying SELDOMpy/src/get_count_bits.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,837 copying SELDOMpy/src/get_input_index.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,838 copying SELDOMpy/src/get_support_truth_tables.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,839 copying SELDOMpy/src/get_truth_tables_index.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,840 copying SELDOMpy/src/hill_function.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,840 copying SELDOMpy/src/linear_transfer_function.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,841 copying SELDOMpy/src/normHill.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,842 copying SELDOMpy/src/nvector_serial.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,843 copying SELDOMpy/src/printAdjMat.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,844 copying SELDOMpy/src/printInterMat.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,844 copying SELDOMpy/src/printNminiTerms.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,845 copying SELDOMpy/src/printTruthTables.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,846 copying SELDOMpy/src/sim_logic_ode.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,846 copying SELDOMpy/src/simulate_amigo_model.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,847 copying SELDOMpy/src/sundials_band.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,848 copying SELDOMpy/src/sundials_dense.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,848 copying SELDOMpy/src/sundials_direct.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,849 copying SELDOMpy/src/sundials_iterative.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,850 copying SELDOMpy/src/sundials_math.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,851 copying SELDOMpy/src/sundials_nvector.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,852 copying SELDOMpy/src/sundials_spbcgs.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,852 copying SELDOMpy/src/sundials_spgmr.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,853 copying SELDOMpy/src/sundials_sptfqmr.c -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:15,854 creating build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,854 copying SELDOMpy/src/include/include_amigo/AMIGO_hdf5.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,855 copying SELDOMpy/src/include/include_amigo/AMIGO_model.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,856 copying SELDOMpy/src/include/include_amigo/AMIGO_model_stats.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,857 copying SELDOMpy/src/include/include_amigo/AMIGO_problem.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,858 copying SELDOMpy/src/include/include_amigo/amigoJAC.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,858 copying SELDOMpy/src/include/include_amigo/amigoRHS.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,859 copying SELDOMpy/src/include/include_amigo/amigoSensRHS.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,860 copying SELDOMpy/src/include/include_amigo/simulate_amigo_model.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_amigo 2025-09-13T00:54:15,861 creating build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,861 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,863 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_band.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,863 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_bandpre.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,864 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_bbdpre.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,865 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_dense.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,865 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_diag.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,866 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_direct.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,867 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_lapack.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,867 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_spbcgs.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,868 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_spgmr.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,869 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_spils.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,870 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_sptfqmr.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/cvodes 2025-09-13T00:54:15,871 creating build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/nvector 2025-09-13T00:54:15,871 copying SELDOMpy/src/include/include_cvodes/nvector/nvector_serial.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/nvector 2025-09-13T00:54:15,872 creating build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,872 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_band.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,873 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_config.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,874 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_dense.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,875 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_direct.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,875 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_fnvector.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,876 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_iterative.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,877 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_lapack.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,878 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_math.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,878 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_nvector.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,879 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_spbcgs.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,880 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_spgmr.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,881 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_sptfqmr.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,881 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_types.h -> build/lib.linux-armv7l-cpython-313/SELDOMpy/src/include/include_cvodes/sundials 2025-09-13T00:54:15,883 running build_ext 2025-09-13T00:54:16,260 building 'hello' extension 2025-09-13T00:54:16,270 creating build/temp.linux-armv7l-cpython-313/SELDOMpy/src 2025-09-13T00:54:16,275 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/AMIGO_model.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/AMIGO_model.o 2025-09-13T00:54:16,440 SELDOMpy/src/AMIGO_model.c: In function ‘simulate_AMIGO_model’: 2025-09-13T00:54:16,440 SELDOMpy/src/AMIGO_model.c:225:1: warning: control reaches end of non-void function [-Wreturn-type] 2025-09-13T00:54:16,440 225 | }; 2025-09-13T00:54:16,440 | ^ 2025-09-13T00:54:17,095 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/AMIGO_model_stats.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/AMIGO_model_stats.o 2025-09-13T00:54:17,137 SELDOMpy/src/AMIGO_model_stats.c:1:9: warning: #pragma once in main file 2025-09-13T00:54:17,138 1 | #pragma once 2025-09-13T00:54:17,138 | ^~~~ 2025-09-13T00:54:17,211 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/AMIGO_problem.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/AMIGO_problem.o 2025-09-13T00:54:17,365 SELDOMpy/src/AMIGO_problem.c: In function ‘eval_AMIGO_problem_LSQ’: 2025-09-13T00:54:17,365 SELDOMpy/src/AMIGO_problem.c:132: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 2025-09-13T00:54:17,366 132 | #pragma omp parallel num_threads(amigo_problem->nthreads) 2025-09-13T00:54:17,366 SELDOMpy/src/AMIGO_problem.c:134: warning: ignoring ‘#pragma omp for’ [-Wunknown-pragmas] 2025-09-13T00:54:17,366 134 | #pragma omp for schedule(dynamic,1) private(i) 2025-09-13T00:54:17,367 SELDOMpy/src/AMIGO_problem.c:127:13: warning: unused variable ‘counter’ [-Wunused-variable] 2025-09-13T00:54:17,367 127 | int counter=0; 2025-09-13T00:54:17,367 | ^~~~~~~ 2025-09-13T00:54:17,367 SELDOMpy/src/AMIGO_problem.c:126:22: warning: unused variable ‘n_exps’ [-Wunused-variable] 2025-09-13T00:54:17,368 126 | int i, j, k, n_exps, n_times, n_obs; 2025-09-13T00:54:17,368 | ^~~~~~ 2025-09-13T00:54:17,368 SELDOMpy/src/AMIGO_problem.c: In function ‘eval_AMIGO_problem_LLK’: 2025-09-13T00:54:17,368 SELDOMpy/src/AMIGO_problem.c:185: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 2025-09-13T00:54:17,368 185 | #pragma omp parallel num_threads(amigo_problem->nthreads) 2025-09-13T00:54:17,368 SELDOMpy/src/AMIGO_problem.c:187: warning: ignoring ‘#pragma omp for’ [-Wunknown-pragmas] 2025-09-13T00:54:17,368 187 | #pragma omp for schedule(dynamic,1) private(i,flag) 2025-09-13T00:54:17,368 SELDOMpy/src/AMIGO_problem.c:182:13: warning: unused variable ‘counter’ [-Wunused-variable] 2025-09-13T00:54:17,369 182 | int counter=0; 2025-09-13T00:54:17,369 | ^~~~~~~ 2025-09-13T00:54:17,369 SELDOMpy/src/AMIGO_problem.c:181:53: warning: variable ‘flag’ set but not used [-Wunused-but-set-variable] 2025-09-13T00:54:17,369 181 | int i, j, k, n_exps, n_times, n_obs,flag; 2025-09-13T00:54:17,369 | ^~~~ 2025-09-13T00:54:17,369 SELDOMpy/src/AMIGO_problem.c:181:30: warning: unused variable ‘n_exps’ [-Wunused-variable] 2025-09-13T00:54:17,369 181 | int i, j, k, n_exps, n_times, n_obs,flag; 2025-09-13T00:54:17,370 | ^~~~~~ 2025-09-13T00:54:17,884 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/anODEModel.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/anODEModel.o 2025-09-13T00:54:18,032 SELDOMpy/src/anODEModel.c: In function ‘amigoRHS’: 2025-09-13T00:54:18,032 SELDOMpy/src/anODEModel.c:23:9: warning: unused variable ‘countBin’ [-Wunused-variable] 2025-09-13T00:54:18,032 23 | int countBin=0; 2025-09-13T00:54:18,032 | ^~~~~~~~ 2025-09-13T00:54:18,033 SELDOMpy/src/anODEModel.c: In function ‘amigo_Y_at_tcon’: 2025-09-13T00:54:18,034 SELDOMpy/src/anODEModel.c:118:18: warning: unused variable ‘amigo_model’ [-Wunused-variable] 2025-09-13T00:54:18,034 118 | AMIGO_model* amigo_model=(AMIGO_model*)data; 2025-09-13T00:54:18,034 | ^~~~~~~~~~~ 2025-09-13T00:54:18,226 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodea.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodea.o 2025-09-13T00:54:18,402 SELDOMpy/src/cvodea.c: In function ‘CVAhermiteStorePnt’: 2025-09-13T00:54:18,403 SELDOMpy/src/cvodea.c:2461:11: warning: variable ‘retval’ set but not used [-Wunused-but-set-variable] 2025-09-13T00:54:18,404 2461 | int is, retval; 2025-09-13T00:54:18,404 | ^~~~~~ 2025-09-13T00:54:18,417 SELDOMpy/src/cvodea.c: In function ‘CVArhsQ’: 2025-09-13T00:54:18,420 SELDOMpy/src/cvodea.c:2957:7: warning: variable ‘flag’ set but not used [-Wunused-but-set-variable] 2025-09-13T00:54:18,420 2957 | int flag, retval; 2025-09-13T00:54:18,421 | ^~~~ 2025-09-13T00:54:19,120 SELDOMpy/src/cvodea.c: In function ‘CVAhermiteGetY’: 2025-09-13T00:54:19,122 SELDOMpy/src/cvodea.c:2523:13: warning: ‘yS0’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-13T00:54:19,123 2523 | N_Vector *yS0, *ySd0, *yS1, *ySd1; 2025-09-13T00:54:19,123 | ^~~ 2025-09-13T00:54:19,124 SELDOMpy/src/cvodea.c:2523:19: warning: ‘ySd0’ may be used uninitialized [-Wmaybe-uninitialized] 2025-09-13T00:54:19,125 2523 | N_Vector *yS0, *ySd0, *yS1, *ySd1; 2025-09-13T00:54:19,125 | ^~~~ 2025-09-13T00:54:21,400 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodea_io.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodea_io.o 2025-09-13T00:54:22,000 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes.o 2025-09-13T00:54:22,220 SELDOMpy/src/cvodes.c: In function ‘cvHin’: 2025-09-13T00:54:22,223 SELDOMpy/src/cvodes.c:4328:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2025-09-13T00:54:22,223 4328 | if (count1 <= 2) 2025-09-13T00:54:22,224 | ^~ 2025-09-13T00:54:22,226 SELDOMpy/src/cvodes.c:4330:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2025-09-13T00:54:22,227 4330 | if (retval == QRHSFUNC_RECVR) return(CV_REPTD_QRHSFUNC_ERR); 2025-09-13T00:54:22,227 | ^~ 2025-09-13T00:54:22,592 SELDOMpy/src/cvodes.c: In function ‘cvQuadSensRhs1InternalDQ’: 2025-09-13T00:54:22,601 SELDOMpy/src/cvodes.c:8850:20: warning: variable ‘rDeltap’ set but not used [-Wunused-but-set-variable] 2025-09-13T00:54:22,601 8850 | realtype Deltap, rDeltap; 2025-09-13T00:54:22,602 | ^~~~~~~ 2025-09-13T00:54:31,810 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_band.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_band.o 2025-09-13T00:54:32,189 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_bandpre.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_bandpre.o 2025-09-13T00:54:32,705 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_bbdpre.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_bbdpre.o 2025-09-13T00:54:33,342 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_dense.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_dense.o 2025-09-13T00:54:33,668 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_diag.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_diag.o 2025-09-13T00:54:34,093 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_direct.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_direct.o 2025-09-13T00:54:34,755 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_io.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_io.o 2025-09-13T00:54:36,113 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_spbcgs.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_spbcgs.o 2025-09-13T00:54:36,539 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_spgmr.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_spgmr.o 2025-09-13T00:54:36,967 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_spils.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_spils.o 2025-09-13T00:54:37,777 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/cvodes_sptfqmr.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/cvodes_sptfqmr.o 2025-09-13T00:54:38,225 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/decimal2binary.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/decimal2binary.o 2025-09-13T00:54:38,372 arm-linux-gnueabihf-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.13/dist-packages/numpy/_core/include -I/usr/include/python3.13 -c SELDOMpy/src/dhc.c -o build/temp.linux-armv7l-cpython-313/SELDOMpy/src/dhc.o 2025-09-13T00:54:38,501 SELDOMpy/src/dhc.c: In function ‘dhc’: 2025-09-13T00:54:38,501 SELDOMpy/src/dhc.c:102:11: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 2025-09-13T00:54:38,501 102 | for(i=0; iamigo_model_stats->error_flag=NULL; 2025-09-13T00:54:45,210 | ^ 2025-09-13T00:54:45,212 SELDOMpy/src/simulate_amigo_model.c: In function ‘set_simulation_stats’: 2025-09-13T00:54:45,213 SELDOMpy/src/simulate_amigo_model.c:302:34: warning: unused variable ‘nps’ [-Wunused-variable] 2025-09-13T00:54:45,213 302 | long int nli, ncfl, npe, nps; 2025-09-13T00:54:45,213 | ^~~ 2025-09-13T00:54:45,213 SELDOMpy/src/simulate_amigo_model.c:302:29: warning: unused variable ‘npe’ [-Wunused-variable] 2025-09-13T00:54:45,213 302 | long int nli, ncfl, npe, nps; 2025-09-13T00:54:45,213 | ^~~ 2025-09-13T00:54:45,213 SELDOMpy/src/simulate_amigo_model.c:302:23: warning: unused variable ‘ncfl’ [-Wunused-variable] 2025-09-13T00:54:45,213 302 | long int nli, ncfl, npe, nps; 2025-09-13T00:54:45,214 | ^~~~ 2025-09-13T00:54:45,214 SELDOMpy/src/simulate_amigo_model.c:302:18: warning: unused variable ‘nli’ [-Wunused-variable] 2025-09-13T00:54:45,214 302 | long int nli, ncfl, npe, nps; 2025-09-13T00:54:45,215 | ^~~ 2025-09-13T00:54:45,227 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-13T00:54:45,449 ERROR: python setup.py bdist_wheel exited with 1 2025-09-13T00:54:45,462 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2025-09-13T00:54:45,462 exec(compile('"'"''"'"''"'"' 2025-09-13T00:54:45,462 # This is -- a caller that pip uses to run setup.py 2025-09-13T00:54:45,462 # 2025-09-13T00:54:45,462 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-13T00:54:45,462 # import from `distutils.core` to work with newer packaging standards. 2025-09-13T00:54:45,462 # - It provides a clear error message when setuptools is not installed. 2025-09-13T00:54:45,462 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-13T00:54:45,462 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-13T00:54:45,462 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-13T00:54:45,462 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-13T00:54:45,462 import os, sys, tokenize, traceback 2025-09-13T00:54:45,462 2025-09-13T00:54:45,462 try: 2025-09-13T00:54:45,462 import setuptools 2025-09-13T00:54:45,462 except ImportError: 2025-09-13T00:54:45,462 print( 2025-09-13T00:54:45,462 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-13T00:54:45,462 "the build environment with exception:", 2025-09-13T00:54:45,462 file=sys.stderr, 2025-09-13T00:54:45,462 ) 2025-09-13T00:54:45,462 traceback.print_exc() 2025-09-13T00:54:45,462 sys.exit(1) 2025-09-13T00:54:45,462 2025-09-13T00:54:45,462 __file__ = %r 2025-09-13T00:54:45,462 sys.argv[0] = __file__ 2025-09-13T00:54:45,462 2025-09-13T00:54:45,462 if os.path.exists(__file__): 2025-09-13T00:54:45,462 filename = __file__ 2025-09-13T00:54:45,462 with tokenize.open(__file__) as f: 2025-09-13T00:54:45,462 setup_py_code = f.read() 2025-09-13T00:54:45,462 else: 2025-09-13T00:54:45,462 filename = "" 2025-09-13T00:54:45,462 setup_py_code = "from setuptools import setup; setup()" 2025-09-13T00:54:45,462 2025-09-13T00:54:45,462 exec(compile(setup_py_code, filename, "exec")) 2025-09-13T00:54:45,462 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-xe7w_dwp/seldompy_57a6628934cf4b5187c4dbf73288252f/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-8_r9iwn5[/] 2025-09-13T00:54:45,462 [bold magenta]cwd[/]: /tmp/pip-wheel-xe7w_dwp/seldompy_57a6628934cf4b5187c4dbf73288252f/ 2025-09-13T00:54:45,462 Building wheel for seldompy (setup.py): finished with status 'error' 2025-09-13T00:54:45,463 ERROR: Failed building wheel for seldompy 2025-09-13T00:54:45,464 Running setup.py clean for seldompy 2025-09-13T00:54:45,465 Running command python setup.py clean 2025-09-13T00:54:46,492 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-13T00:54:46,493 !! 2025-09-13T00:54:46,493 ******************************************************************************** 2025-09-13T00:54:46,493 Usage of dash-separated 'description-file' will not be supported in future 2025-09-13T00:54:46,493 versions. Please use the underscore name 'description_file' instead. 2025-09-13T00:54:46,493 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-13T00:54:46,493 or your builds will no longer be supported. 2025-09-13T00:54:46,494 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-13T00:54:46,494 ******************************************************************************** 2025-09-13T00:54:46,494 !! 2025-09-13T00:54:46,494 opt = self._enforce_underscore(opt, section) 2025-09-13T00:54:47,006 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:599: SetuptoolsDeprecationWarning: Invalid dash-separated key 'description-file' in 'metadata' (setup.cfg), please use the underscore name 'description_file' instead. 2025-09-13T00:54:47,006 !! 2025-09-13T00:54:47,006 ******************************************************************************** 2025-09-13T00:54:47,006 Usage of dash-separated 'description-file' will not be supported in future 2025-09-13T00:54:47,007 versions. Please use the underscore name 'description_file' instead. 2025-09-13T00:54:47,007 (Affected: SELDOMpy). 2025-09-13T00:54:47,007 By 2026-Mar-03, you need to update your project and remove deprecated calls 2025-09-13T00:54:47,007 or your builds will no longer be supported. 2025-09-13T00:54:47,007 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2025-09-13T00:54:47,007 ******************************************************************************** 2025-09-13T00:54:47,007 !! 2025-09-13T00:54:47,007 opt = self._enforce_underscore(opt, section) 2025-09-13T00:54:47,009 /usr/local/lib/python3.13/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-13T00:54:47,009 !! 2025-09-13T00:54:47,009 ******************************************************************************** 2025-09-13T00:54:47,009 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-13T00:54:47,009 License :: OSI Approved :: GNU General Public License v3 (GPLv3) 2025-09-13T00:54:47,010 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-13T00:54:47,010 ******************************************************************************** 2025-09-13T00:54:47,010 !! 2025-09-13T00:54:47,010 self._finalize_license_expression() 2025-09-13T00:54:47,096 running clean 2025-09-13T00:54:47,264 removing 'build/temp.linux-armv7l-cpython-313' (and everything under it) 2025-09-13T00:54:47,266 removing 'build/lib.linux-armv7l-cpython-313' (and everything under it) 2025-09-13T00:54:47,271 'build/bdist.linux-armv7l' does not exist -- can't clean it 2025-09-13T00:54:47,271 'build/scripts-3.13' does not exist -- can't clean it 2025-09-13T00:54:47,272 removing 'build' 2025-09-13T00:54:47,431 Failed to build seldompy 2025-09-13T00:54:47,432 ERROR: Failed to build one or more wheels 2025-09-13T00:54:47,433 Exception information: 2025-09-13T00:54:47,433 Traceback (most recent call last): 2025-09-13T00:54:47,433 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-13T00:54:47,433 status = _inner_run() 2025-09-13T00:54:47,433 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-13T00:54:47,433 return self.run(options, args) 2025-09-13T00:54:47,433 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-13T00:54:47,433 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-13T00:54:47,433 return func(self, options, args) 2025-09-13T00:54:47,433 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 180, in run 2025-09-13T00:54:47,433 raise CommandError("Failed to build one or more wheels") 2025-09-13T00:54:47,433 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-13T00:54:47,438 Removed build tracker: '/tmp/pip-build-tracker-pbebjcrz'