2025-09-16T07:03:16,195 Created temporary directory: /tmp/pip-build-tracker-mrbscbkd 2025-09-16T07:03:16,196 Initialized build tracking at /tmp/pip-build-tracker-mrbscbkd 2025-09-16T07:03:16,196 Created build tracker: /tmp/pip-build-tracker-mrbscbkd 2025-09-16T07:03:16,196 Entered build tracker: /tmp/pip-build-tracker-mrbscbkd 2025-09-16T07:03:16,197 Created temporary directory: /tmp/pip-wheel-wljsegq1 2025-09-16T07:03:16,201 Created temporary directory: /tmp/pip-ephem-wheel-cache-s_p3c1vn 2025-09-16T07:03:16,263 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-16T07:03:16,266 2 location(s) to search for versions of scipion-chem-protox: 2025-09-16T07:03:16,266 * https://pypi.org/simple/scipion-chem-protox/ 2025-09-16T07:03:16,266 * https://www.piwheels.org/simple/scipion-chem-protox/ 2025-09-16T07:03:16,267 Fetching project page and analyzing links: https://pypi.org/simple/scipion-chem-protox/ 2025-09-16T07:03:16,267 Getting page https://pypi.org/simple/scipion-chem-protox/ 2025-09-16T07:03:16,269 Found index url https://pypi.org/simple/ 2025-09-16T07:03:16,345 Fetched page https://pypi.org/simple/scipion-chem-protox/ as application/vnd.pypi.simple.v1+json 2025-09-16T07:03:16,346 Found link https://files.pythonhosted.org/packages/2f/5b/4ec2a869763c3e6e9bdb23b5965e0973169f4dce40a5e4a1346284bfc468/scipion_chem_protox-0.1.tar.gz (from https://pypi.org/simple/scipion-chem-protox/), version: 0.1 2025-09-16T07:03:16,346 Fetching project page and analyzing links: https://www.piwheels.org/simple/scipion-chem-protox/ 2025-09-16T07:03:16,347 Getting page https://www.piwheels.org/simple/scipion-chem-protox/ 2025-09-16T07:03:16,348 Found index url https://www.piwheels.org/simple/ 2025-09-16T07:03:16,439 Fetched page https://www.piwheels.org/simple/scipion-chem-protox/ as text/html 2025-09-16T07:03:16,440 Skipping link: not a file: https://www.piwheels.org/simple/scipion-chem-protox/ 2025-09-16T07:03:16,440 Skipping link: not a file: https://pypi.org/simple/scipion-chem-protox/ 2025-09-16T07:03:16,465 Given no hashes to check 1 links for project 'scipion-chem-protox': discarding no candidates 2025-09-16T07:03:16,466 Collecting scipion-chem-protox==0.1 2025-09-16T07:03:16,467 Created temporary directory: /tmp/pip-unpack-lh6_avfd 2025-09-16T07:03:16,533 Downloading scipion_chem_protox-0.1.tar.gz (19 kB) 2025-09-16T07:03:16,562 Added scipion-chem-protox==0.1 from https://files.pythonhosted.org/packages/2f/5b/4ec2a869763c3e6e9bdb23b5965e0973169f4dce40a5e4a1346284bfc468/scipion_chem_protox-0.1.tar.gz to build tracker '/tmp/pip-build-tracker-mrbscbkd' 2025-09-16T07:03:16,563 Running setup.py (path:/tmp/pip-wheel-wljsegq1/scipion-chem-protox_4283e78a9c5b4b40acc430944cfcfa6f/setup.py) egg_info for package scipion-chem-protox 2025-09-16T07:03:16,563 Created temporary directory: /tmp/pip-pip-egg-info-_i7d1sbg 2025-09-16T07:03:16,563 Preparing metadata (setup.py): started 2025-09-16T07:03:16,564 Running command python setup.py egg_info 2025-09-16T07:03:17,121 Traceback (most recent call last): 2025-09-16T07:03:17,122 File "", line 2, in 2025-09-16T07:03:17,123 exec(compile(''' 2025-09-16T07:03:17,123 ~~~~^^^^^^^^^^^^ 2025-09-16T07:03:17,123 # This is -- a caller that pip uses to run setup.py 2025-09-16T07:03:17,123 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,123 ...<32 lines>... 2025-09-16T07:03:17,123 exec(compile(setup_py_code, filename, "exec")) 2025-09-16T07:03:17,124 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,124 ''' % ('/tmp/pip-wheel-wljsegq1/scipion-chem-protox_4283e78a9c5b4b40acc430944cfcfa6f/setup.py',), "", "exec")) 2025-09-16T07:03:17,124 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,124 File "", line 35, in 2025-09-16T07:03:17,124 File "/tmp/pip-wheel-wljsegq1/scipion-chem-protox_4283e78a9c5b4b40acc430944cfcfa6f/setup.py", line 14, in 2025-09-16T07:03:17,125 from protox.constants import PLUGIN_VERSION 2025-09-16T07:03:17,125 File "/tmp/pip-wheel-wljsegq1/scipion-chem-protox_4283e78a9c5b4b40acc430944cfcfa6f/protox/__init__.py", line 30, in 2025-09-16T07:03:17,125 from scipion.install.funcs import InstallHelper 2025-09-16T07:03:17,125 ModuleNotFoundError: No module named 'scipion' 2025-09-16T07:03:17,222 ERROR: python setup.py egg_info exited with 1 2025-09-16T07:03:17,235 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2025-09-16T07:03:17,235 exec(compile('"'"''"'"''"'"' 2025-09-16T07:03:17,235 # This is -- a caller that pip uses to run setup.py 2025-09-16T07:03:17,235 # 2025-09-16T07:03:17,235 # - It imports setuptools before invoking setup.py, to enable projects that directly 2025-09-16T07:03:17,235 # import from `distutils.core` to work with newer packaging standards. 2025-09-16T07:03:17,235 # - It provides a clear error message when setuptools is not installed. 2025-09-16T07:03:17,235 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2025-09-16T07:03:17,235 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2025-09-16T07:03:17,235 # manifest_maker: standard file '"'"'-c'"'"' not found". 2025-09-16T07:03:17,235 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2025-09-16T07:03:17,235 import os, sys, tokenize, traceback 2025-09-16T07:03:17,235 2025-09-16T07:03:17,235 try: 2025-09-16T07:03:17,235 import setuptools 2025-09-16T07:03:17,235 except ImportError: 2025-09-16T07:03:17,235 print( 2025-09-16T07:03:17,235 "ERROR: Can not execute `setup.py` since setuptools failed to import in " 2025-09-16T07:03:17,235 "the build environment with exception:", 2025-09-16T07:03:17,235 file=sys.stderr, 2025-09-16T07:03:17,235 ) 2025-09-16T07:03:17,235 traceback.print_exc() 2025-09-16T07:03:17,235 sys.exit(1) 2025-09-16T07:03:17,235 2025-09-16T07:03:17,235 __file__ = %r 2025-09-16T07:03:17,235 sys.argv[0] = __file__ 2025-09-16T07:03:17,235 2025-09-16T07:03:17,235 if os.path.exists(__file__): 2025-09-16T07:03:17,235 filename = __file__ 2025-09-16T07:03:17,235 with tokenize.open(__file__) as f: 2025-09-16T07:03:17,235 setup_py_code = f.read() 2025-09-16T07:03:17,235 else: 2025-09-16T07:03:17,235 filename = "" 2025-09-16T07:03:17,235 setup_py_code = "from setuptools import setup; setup()" 2025-09-16T07:03:17,235 2025-09-16T07:03:17,235 exec(compile(setup_py_code, filename, "exec")) 2025-09-16T07:03:17,235 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-wljsegq1/scipion-chem-protox_4283e78a9c5b4b40acc430944cfcfa6f/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-_i7d1sbg[/] 2025-09-16T07:03:17,235 [bold magenta]cwd[/]: /tmp/pip-wheel-wljsegq1/scipion-chem-protox_4283e78a9c5b4b40acc430944cfcfa6f/ 2025-09-16T07:03:17,236 Preparing metadata (setup.py): finished with status 'error' 2025-09-16T07:03:17,237 ERROR: metadata generation failed 2025-09-16T07:03:17,243 Exception information: 2025-09-16T07:03:17,243 Traceback (most recent call last): 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 63, in generate_metadata 2025-09-16T07:03:17,243 call_subprocess( 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~^ 2025-09-16T07:03:17,243 args, 2025-09-16T07:03:17,243 ^^^^^ 2025-09-16T07:03:17,243 ...<2 lines>... 2025-09-16T07:03:17,243 spinner=spinner, 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 ) 2025-09-16T07:03:17,243 ^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/utils/subprocess.py", line 209, in call_subprocess 2025-09-16T07:03:17,243 raise error 2025-09-16T07:03:17,243 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2025-09-16T07:03:17,243 2025-09-16T07:03:17,243 The above exception was the direct cause of the following exception: 2025-09-16T07:03:17,243 2025-09-16T07:03:17,243 Traceback (most recent call last): 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 105, in _run_wrapper 2025-09-16T07:03:17,243 status = _inner_run() 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 96, in _inner_run 2025-09-16T07:03:17,243 return self.run(options, args) 2025-09-16T07:03:17,243 ~~~~~~~~^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 68, in wrapper 2025-09-16T07:03:17,243 return func(self, options, args) 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2025-09-16T07:03:17,243 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve 2025-09-16T07:03:17,243 result = self._result = resolver.resolve( 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~^ 2025-09-16T07:03:17,243 collected.requirements, max_rounds=limit_how_complex_resolution_can_be 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 ) 2025-09-16T07:03:17,243 ^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 515, in resolve 2025-09-16T07:03:17,243 state = resolution.resolve(requirements, max_rounds=max_rounds) 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 388, in resolve 2025-09-16T07:03:17,243 self._add_to_criteria(self.state.criteria, r, parent=None) 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/resolvers/resolution.py", line 141, in _add_to_criteria 2025-09-16T07:03:17,243 if not criterion.candidates: 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_vendor/resolvelib/structs.py", line 194, in __bool__ 2025-09-16T07:03:17,243 return bool(self._sequence) 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 163, in __bool__ 2025-09-16T07:03:17,243 self._bool = any(self) 2025-09-16T07:03:17,243 ~~~^^^^^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 147, in 2025-09-16T07:03:17,243 return (c for c in iterator if id(c) not in self._incompatible_ids) 2025-09-16T07:03:17,243 ^^^^^^^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 37, in _iter_built 2025-09-16T07:03:17,243 candidate = func() 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 187, in _make_candidate_from_link 2025-09-16T07:03:17,243 base: Optional[BaseCandidate] = self._make_base_candidate_from_link( 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-16T07:03:17,243 link, template, name, version 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 ) 2025-09-16T07:03:17,243 ^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 233, in _make_base_candidate_from_link 2025-09-16T07:03:17,243 self._link_candidate_cache[link] = LinkCandidate( 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~^ 2025-09-16T07:03:17,243 link, 2025-09-16T07:03:17,243 ^^^^^ 2025-09-16T07:03:17,243 ...<3 lines>... 2025-09-16T07:03:17,243 version=version, 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 ) 2025-09-16T07:03:17,243 ^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 306, in __init__ 2025-09-16T07:03:17,243 super().__init__( 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~^ 2025-09-16T07:03:17,243 link=link, 2025-09-16T07:03:17,243 ^^^^^^^^^^ 2025-09-16T07:03:17,243 ...<4 lines>... 2025-09-16T07:03:17,243 version=version, 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 ) 2025-09-16T07:03:17,243 ^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 159, in __init__ 2025-09-16T07:03:17,243 self.dist = self._prepare() 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 236, in _prepare 2025-09-16T07:03:17,243 dist = self._prepare_distribution() 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 317, in _prepare_distribution 2025-09-16T07:03:17,243 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 532, in prepare_linked_requirement 2025-09-16T07:03:17,243 return self._prepare_linked_requirement(req, parallel_builds) 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 647, in _prepare_linked_requirement 2025-09-16T07:03:17,243 dist = _get_prepared_distribution( 2025-09-16T07:03:17,243 req, 2025-09-16T07:03:17,243 ...<3 lines>... 2025-09-16T07:03:17,243 self.check_build_deps, 2025-09-16T07:03:17,243 ) 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2025-09-16T07:03:17,243 abstract_dist.prepare_distribution_metadata( 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-16T07:03:17,243 finder, build_isolation, check_build_deps 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 ) 2025-09-16T07:03:17,243 ^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/distributions/sdist.py", line 69, in prepare_distribution_metadata 2025-09-16T07:03:17,243 self.req.prepare_metadata() 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~~~~~~~~~~^^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/req/req_install.py", line 581, in prepare_metadata 2025-09-16T07:03:17,243 self.metadata_directory = generate_metadata_legacy( 2025-09-16T07:03:17,243 ~~~~~~~~~~~~~~~~~~~~~~~~^ 2025-09-16T07:03:17,243 build_env=self.build_env, 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 ...<3 lines>... 2025-09-16T07:03:17,243 details=details, 2025-09-16T07:03:17,243 ^^^^^^^^^^^^^^^^ 2025-09-16T07:03:17,243 ) 2025-09-16T07:03:17,243 ^ 2025-09-16T07:03:17,243 File "/usr/lib/python3/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 70, in generate_metadata 2025-09-16T07:03:17,243 raise MetadataGenerationFailed(package_details=details) from error 2025-09-16T07:03:17,243 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2025-09-16T07:03:17,267 Removed scipion-chem-protox==0.1 from https://files.pythonhosted.org/packages/2f/5b/4ec2a869763c3e6e9bdb23b5965e0973169f4dce40a5e4a1346284bfc468/scipion_chem_protox-0.1.tar.gz from build tracker '/tmp/pip-build-tracker-mrbscbkd' 2025-09-16T07:03:17,267 Removed build tracker: '/tmp/pip-build-tracker-mrbscbkd'