2025-09-16T21:14:15,133 Created temporary directory: /tmp/pip-ephem-wheel-cache-v5_fa7qr 2025-09-16T21:14:15,135 Created temporary directory: /tmp/pip-build-tracker-stavq_rc 2025-09-16T21:14:15,135 Initialized build tracking at /tmp/pip-build-tracker-stavq_rc 2025-09-16T21:14:15,136 Created build tracker: /tmp/pip-build-tracker-stavq_rc 2025-09-16T21:14:15,136 Entered build tracker: /tmp/pip-build-tracker-stavq_rc 2025-09-16T21:14:15,137 Created temporary directory: /tmp/pip-wheel-6bha9vzt 2025-09-16T21:14:15,140 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-09-16T21:14:15,142 Created temporary directory: /tmp/pip-ephem-wheel-cache-g3zu6k0k 2025-09-16T21:14:15,163 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-16T21:14:15,167 2 location(s) to search for versions of em-map-utils: 2025-09-16T21:14:15,167 * https://pypi.org/simple/em-map-utils/ 2025-09-16T21:14:15,167 * https://www.piwheels.org/simple/em-map-utils/ 2025-09-16T21:14:15,168 Fetching project page and analyzing links: https://pypi.org/simple/em-map-utils/ 2025-09-16T21:14:15,168 Getting page https://pypi.org/simple/em-map-utils/ 2025-09-16T21:14:15,170 Found index url https://pypi.org/simple 2025-09-16T21:14:15,392 Fetched page https://pypi.org/simple/em-map-utils/ as application/vnd.pypi.simple.v1+json 2025-09-16T21:14:15,393 Found link https://files.pythonhosted.org/packages/42/f1/eff45b58b2de6c53ef67a7cc199fbc57386dbf17647ab19dd7f14a85c66d/em-map-utils-0.0.1.tar.gz (from https://pypi.org/simple/em-map-utils/), version: 0.0.1 2025-09-16T21:14:15,394 Found link https://files.pythonhosted.org/packages/c0/3e/e00d1d957b02d90907216fb660c7a478899708a136608ebaad9664d7298d/em_map_utils-0.0.2.tar.gz (from https://pypi.org/simple/em-map-utils/), version: 0.0.2 2025-09-16T21:14:15,395 Fetching project page and analyzing links: https://www.piwheels.org/simple/em-map-utils/ 2025-09-16T21:14:15,396 Getting page https://www.piwheels.org/simple/em-map-utils/ 2025-09-16T21:14:15,397 Found index url https://www.piwheels.org/simple 2025-09-16T21:14:15,562 Fetched page https://www.piwheels.org/simple/em-map-utils/ as text/html 2025-09-16T21:14:15,563 Skipping link: No binaries permitted for em-map-utils: https://www.piwheels.org/simple/em-map-utils/em_map_utils-0.0.1-py3-none-any.whl#sha256=9b152cb62d91b370b8c57dd83c32e1a402a1d19f2711e7c622938e5a7c30f208 (from https://www.piwheels.org/simple/em-map-utils/) 2025-09-16T21:14:15,564 Skipping link: not a file: https://www.piwheels.org/simple/em-map-utils/ 2025-09-16T21:14:15,565 Skipping link: not a file: https://pypi.org/simple/em-map-utils/ 2025-09-16T21:14:15,584 Given no hashes to check 1 links for project 'em-map-utils': discarding no candidates 2025-09-16T21:14:15,601 Collecting em-map-utils==0.0.2 2025-09-16T21:14:15,604 Created temporary directory: /tmp/pip-unpack-2rx9_qq5 2025-09-16T21:14:15,822 Downloading em_map_utils-0.0.2.tar.gz (30 kB) 2025-09-16T21:14:15,906 Added em-map-utils==0.0.2 from https://files.pythonhosted.org/packages/c0/3e/e00d1d957b02d90907216fb660c7a478899708a136608ebaad9664d7298d/em_map_utils-0.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-stavq_rc' 2025-09-16T21:14:15,907 Running setup.py (path:/tmp/pip-wheel-6bha9vzt/em-map-utils_3c1ee83f72b64c44a747b50008f95703/setup.py) egg_info for package em-map-utils 2025-09-16T21:14:15,908 Created temporary directory: /tmp/pip-pip-egg-info-t7izpn7q 2025-09-16T21:14:15,909 Preparing metadata (setup.py): started 2025-09-16T21:14:15,910 Running command python setup.py egg_info 2025-09-16T21:14:16,813 running egg_info 2025-09-16T21:14:16,842 creating /tmp/pip-pip-egg-info-t7izpn7q/em_map_utils.egg-info 2025-09-16T21:14:16,843 writing /tmp/pip-pip-egg-info-t7izpn7q/em_map_utils.egg-info/PKG-INFO 2025-09-16T21:14:16,846 writing dependency_links to /tmp/pip-pip-egg-info-t7izpn7q/em_map_utils.egg-info/dependency_links.txt 2025-09-16T21:14:16,849 writing top-level names to /tmp/pip-pip-egg-info-t7izpn7q/em_map_utils.egg-info/top_level.txt 2025-09-16T21:14:16,850 writing manifest file '/tmp/pip-pip-egg-info-t7izpn7q/em_map_utils.egg-info/SOURCES.txt' 2025-09-16T21:14:16,936 reading manifest file '/tmp/pip-pip-egg-info-t7izpn7q/em_map_utils.egg-info/SOURCES.txt' 2025-09-16T21:14:16,938 reading manifest template 'MANIFEST.in' 2025-09-16T21:14:16,939 warning: no files found matching '*.py' under directory 'em-map-utils' 2025-09-16T21:14:16,940 adding license file 'LICENSE' 2025-09-16T21:14:16,942 writing manifest file '/tmp/pip-pip-egg-info-t7izpn7q/em_map_utils.egg-info/SOURCES.txt' 2025-09-16T21:14:17,050 Preparing metadata (setup.py): finished with status 'done' 2025-09-16T21:14:17,054 Source in /tmp/pip-wheel-6bha9vzt/em-map-utils_3c1ee83f72b64c44a747b50008f95703 has version 0.0.2, which satisfies requirement em-map-utils==0.0.2 from https://files.pythonhosted.org/packages/c0/3e/e00d1d957b02d90907216fb660c7a478899708a136608ebaad9664d7298d/em_map_utils-0.0.2.tar.gz 2025-09-16T21:14:17,054 Removed em-map-utils==0.0.2 from https://files.pythonhosted.org/packages/c0/3e/e00d1d957b02d90907216fb660c7a478899708a136608ebaad9664d7298d/em_map_utils-0.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-stavq_rc' 2025-09-16T21:14:17,059 Created temporary directory: /tmp/pip-unpack-nw1fs4cp 2025-09-16T21:14:17,059 Building wheels for collected packages: em-map-utils 2025-09-16T21:14:17,064 Created temporary directory: /tmp/pip-wheel-1vkxtfgf 2025-09-16T21:14:17,064 Building wheel for em-map-utils (setup.py): started 2025-09-16T21:14:17,066 Destination directory: /tmp/pip-wheel-1vkxtfgf 2025-09-16T21:14:17,066 Running command python setup.py bdist_wheel 2025-09-16T21:14:17,893 running bdist_wheel 2025-09-16T21:14:18,026 running build 2025-09-16T21:14:18,027 running build_py 2025-09-16T21:14:18,057 creating build/lib/em_map_utils 2025-09-16T21:14:18,059 copying em_map_utils/filled_cuboid.py -> build/lib/em_map_utils 2025-09-16T21:14:18,062 copying em_map_utils/farm_function.py -> build/lib/em_map_utils 2025-09-16T21:14:18,064 copying em_map_utils/map_line_projections.py -> build/lib/em_map_utils 2025-09-16T21:14:18,066 copying em_map_utils/util.py -> build/lib/em_map_utils 2025-09-16T21:14:18,068 copying em_map_utils/map_rotate.py -> build/lib/em_map_utils 2025-09-16T21:14:18,070 copying em_map_utils/filled_sphere.py -> build/lib/em_map_utils 2025-09-16T21:14:18,072 copying em_map_utils/filled_cylinder.py -> build/lib/em_map_utils 2025-09-16T21:14:18,074 copying em_map_utils/structure_size_and_shape.py -> build/lib/em_map_utils 2025-09-16T21:14:18,076 copying em_map_utils/map_threshold.py -> build/lib/em_map_utils 2025-09-16T21:14:18,079 copying em_map_utils/__init__.py -> build/lib/em_map_utils 2025-09-16T21:14:18,081 copying em_map_utils/map_covariance.py -> build/lib/em_map_utils 2025-09-16T21:14:18,083 copying em_map_utils/download_emdb.py -> build/lib/em_map_utils 2025-09-16T21:14:18,086 creating build/lib/em_map_utils/demos 2025-09-16T21:14:18,087 copying em_map_utils/demos/demo_filled_sphere.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,089 copying em_map_utils/demos/demo_filled_cylinder.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,091 copying em_map_utils/demos/demo_filled_cuboid.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,093 copying em_map_utils/demos/demo_map_rotate.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,095 copying em_map_utils/demos/demo_map_covariance.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,097 copying em_map_utils/demos/__init__.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,099 copying em_map_utils/demos/demo_map_line_projections.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,101 copying em_map_utils/demos/ortho_surface_views.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,103 copying em_map_utils/demos/demo_farm_function.py -> build/lib/em_map_utils/demos 2025-09-16T21:14:18,134 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-16T21:14:18,134 !! 2025-09-16T21:14:18,135 ******************************************************************************** 2025-09-16T21:14:18,136 Please avoid running ``setup.py`` directly. 2025-09-16T21:14:18,136 Instead, use pypa/build, pypa/installer or other 2025-09-16T21:14:18,137 standards-based tools. 2025-09-16T21:14:18,138 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-16T21:14:18,138 or your builds will no longer be supported. 2025-09-16T21:14:18,139 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-16T21:14:18,139 ******************************************************************************** 2025-09-16T21:14:18,140 !! 2025-09-16T21:14:18,141 self.initialize_options() 2025-09-16T21:14:18,161 installing to build/bdist.linux-armv7l/wheel 2025-09-16T21:14:18,161 running install 2025-09-16T21:14:18,184 running install_lib 2025-09-16T21:14:18,211 creating build/bdist.linux-armv7l/wheel 2025-09-16T21:14:18,213 creating build/bdist.linux-armv7l/wheel/em_map_utils 2025-09-16T21:14:18,214 copying build/lib/em_map_utils/filled_cuboid.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,216 copying build/lib/em_map_utils/farm_function.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,218 copying build/lib/em_map_utils/map_line_projections.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,220 copying build/lib/em_map_utils/util.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,222 copying build/lib/em_map_utils/map_rotate.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,224 copying build/lib/em_map_utils/filled_sphere.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,226 copying build/lib/em_map_utils/filled_cylinder.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,228 copying build/lib/em_map_utils/structure_size_and_shape.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,231 copying build/lib/em_map_utils/map_threshold.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,233 copying build/lib/em_map_utils/__init__.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,235 copying build/lib/em_map_utils/map_covariance.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,238 creating build/bdist.linux-armv7l/wheel/em_map_utils/demos 2025-09-16T21:14:18,239 copying build/lib/em_map_utils/demos/demo_filled_sphere.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,241 copying build/lib/em_map_utils/demos/demo_filled_cylinder.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,243 copying build/lib/em_map_utils/demos/demo_filled_cuboid.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,245 copying build/lib/em_map_utils/demos/demo_map_rotate.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,247 copying build/lib/em_map_utils/demos/demo_map_covariance.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,249 copying build/lib/em_map_utils/demos/__init__.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,251 copying build/lib/em_map_utils/demos/demo_map_line_projections.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,253 copying build/lib/em_map_utils/demos/ortho_surface_views.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,255 copying build/lib/em_map_utils/demos/demo_farm_function.py -> build/bdist.linux-armv7l/wheel/./em_map_utils/demos 2025-09-16T21:14:18,257 copying build/lib/em_map_utils/download_emdb.py -> build/bdist.linux-armv7l/wheel/./em_map_utils 2025-09-16T21:14:18,259 running install_egg_info 2025-09-16T21:14:18,293 running egg_info 2025-09-16T21:14:18,320 writing em_map_utils.egg-info/PKG-INFO 2025-09-16T21:14:18,323 writing dependency_links to em_map_utils.egg-info/dependency_links.txt 2025-09-16T21:14:18,325 writing top-level names to em_map_utils.egg-info/top_level.txt 2025-09-16T21:14:18,355 reading manifest file 'em_map_utils.egg-info/SOURCES.txt' 2025-09-16T21:14:18,358 reading manifest template 'MANIFEST.in' 2025-09-16T21:14:18,359 warning: no files found matching '*.py' under directory 'em-map-utils' 2025-09-16T21:14:18,360 adding license file 'LICENSE' 2025-09-16T21:14:18,363 writing manifest file 'em_map_utils.egg-info/SOURCES.txt' 2025-09-16T21:14:18,364 Copying em_map_utils.egg-info to build/bdist.linux-armv7l/wheel/./em_map_utils-0.0.2-py3.11.egg-info 2025-09-16T21:14:18,371 running install_scripts 2025-09-16T21:14:18,382 creating build/bdist.linux-armv7l/wheel/em_map_utils-0.0.2.dist-info/WHEEL 2025-09-16T21:14:18,384 creating '/tmp/pip-wheel-1vkxtfgf/em_map_utils-0.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-16T21:14:18,386 adding 'em_map_utils/__init__.py' 2025-09-16T21:14:18,388 adding 'em_map_utils/download_emdb.py' 2025-09-16T21:14:18,390 adding 'em_map_utils/farm_function.py' 2025-09-16T21:14:18,392 adding 'em_map_utils/filled_cuboid.py' 2025-09-16T21:14:18,393 adding 'em_map_utils/filled_cylinder.py' 2025-09-16T21:14:18,395 adding 'em_map_utils/filled_sphere.py' 2025-09-16T21:14:18,397 adding 'em_map_utils/map_covariance.py' 2025-09-16T21:14:18,398 adding 'em_map_utils/map_line_projections.py' 2025-09-16T21:14:18,400 adding 'em_map_utils/map_rotate.py' 2025-09-16T21:14:18,402 adding 'em_map_utils/map_threshold.py' 2025-09-16T21:14:18,404 adding 'em_map_utils/structure_size_and_shape.py' 2025-09-16T21:14:18,405 adding 'em_map_utils/util.py' 2025-09-16T21:14:18,407 adding 'em_map_utils/demos/__init__.py' 2025-09-16T21:14:18,408 adding 'em_map_utils/demos/demo_farm_function.py' 2025-09-16T21:14:18,409 adding 'em_map_utils/demos/demo_filled_cuboid.py' 2025-09-16T21:14:18,411 adding 'em_map_utils/demos/demo_filled_cylinder.py' 2025-09-16T21:14:18,412 adding 'em_map_utils/demos/demo_filled_sphere.py' 2025-09-16T21:14:18,413 adding 'em_map_utils/demos/demo_map_covariance.py' 2025-09-16T21:14:18,415 adding 'em_map_utils/demos/demo_map_line_projections.py' 2025-09-16T21:14:18,416 adding 'em_map_utils/demos/demo_map_rotate.py' 2025-09-16T21:14:18,417 adding 'em_map_utils/demos/ortho_surface_views.py' 2025-09-16T21:14:18,421 adding 'em_map_utils-0.0.2.dist-info/licenses/LICENSE' 2025-09-16T21:14:18,422 adding 'em_map_utils-0.0.2.dist-info/METADATA' 2025-09-16T21:14:18,423 adding 'em_map_utils-0.0.2.dist-info/WHEEL' 2025-09-16T21:14:18,424 adding 'em_map_utils-0.0.2.dist-info/top_level.txt' 2025-09-16T21:14:18,425 adding 'em_map_utils-0.0.2.dist-info/RECORD' 2025-09-16T21:14:18,427 removing build/bdist.linux-armv7l/wheel 2025-09-16T21:14:18,543 Building wheel for em-map-utils (setup.py): finished with status 'done' 2025-09-16T21:14:18,546 Created wheel for em-map-utils: filename=em_map_utils-0.0.2-py3-none-any.whl size=42982 sha256=ecf32fa6855e6f6b416655f375faa7a832de46b8a2c48308a09d36b2b4764a77 2025-09-16T21:14:18,547 Stored in directory: /tmp/pip-ephem-wheel-cache-g3zu6k0k/wheels/6a/60/39/cfd8f03908520c99cbf3a44cb9d99cae1eded69af8a832c6cb 2025-09-16T21:14:18,558 Successfully built em-map-utils 2025-09-16T21:14:18,563 Removed build tracker: '/tmp/pip-build-tracker-stavq_rc'