2025-09-16T22:01:00,097 Created temporary directory: /tmp/pip-ephem-wheel-cache-xggyt3n4 2025-09-16T22:01:00,099 Created temporary directory: /tmp/pip-build-tracker-h3okzgud 2025-09-16T22:01:00,100 Initialized build tracking at /tmp/pip-build-tracker-h3okzgud 2025-09-16T22:01:00,100 Created build tracker: /tmp/pip-build-tracker-h3okzgud 2025-09-16T22:01:00,101 Entered build tracker: /tmp/pip-build-tracker-h3okzgud 2025-09-16T22:01:00,101 Created temporary directory: /tmp/pip-wheel-uivgfyv9 2025-09-16T22:01:00,104 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-09-16T22:01:00,107 Created temporary directory: /tmp/pip-ephem-wheel-cache-f4i7c0nx 2025-09-16T22:01:00,128 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-16T22:01:00,131 2 location(s) to search for versions of scipion-app: 2025-09-16T22:01:00,131 * https://pypi.org/simple/scipion-app/ 2025-09-16T22:01:00,131 * https://www.piwheels.org/simple/scipion-app/ 2025-09-16T22:01:00,132 Fetching project page and analyzing links: https://pypi.org/simple/scipion-app/ 2025-09-16T22:01:00,133 Getting page https://pypi.org/simple/scipion-app/ 2025-09-16T22:01:00,134 Found index url https://pypi.org/simple 2025-09-16T22:01:00,352 Fetched page https://pypi.org/simple/scipion-app/ as application/vnd.pypi.simple.v1+json 2025-09-16T22:01:00,358 Found link https://files.pythonhosted.org/packages/66/64/85ffad3617ea776896aa24dfcb51d367c193220dd174de03ef85fd6edfb8/scipion-app-3.0.1a1.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.1a1 2025-09-16T22:01:00,359 Found link https://files.pythonhosted.org/packages/f7/0f/1b7c5a73e2dc09c3cda15b2d74cfe148d8dde4d1e2a76f0a78d0a5bdfde2/scipion-app-3.0.1b1.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.1b1 2025-09-16T22:01:00,359 Found link https://files.pythonhosted.org/packages/5e/b0/42badd16859b81e21e22bfac06f3e894670a9e72880f9ec31311b4472044/scipion-app-3.0.1b3.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.1b3 2025-09-16T22:01:00,360 Found link https://files.pythonhosted.org/packages/f8/ff/37eb320a0e119c42601df5d2de4bc774c24f2a4ee75415b8e69bb33f8d48/scipion-app-3.0.1.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.1 2025-09-16T22:01:00,361 Found link https://files.pythonhosted.org/packages/45/3b/71079f1a346fd9851fdb14d3021444183072a03eec00c4ec1ee0c501f2cb/scipion-app-3.0.2.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.2 2025-09-16T22:01:00,362 Found link https://files.pythonhosted.org/packages/80/4f/d2ab1ca12d4121d87a5321a41a25af6ae6d50f470ca61586c7b0041fb0ff/scipion-app-3.0.3.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.3 2025-09-16T22:01:00,363 Found link https://files.pythonhosted.org/packages/71/6f/17dd5727fbd6e9a0279c3c6e3bbc171d085d3c7495232f4dd6fdd623b958/scipion-app-3.0.4.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.4 2025-09-16T22:01:00,363 Found link https://files.pythonhosted.org/packages/e7/65/d24e1ec62290603cbbf2e64cde89e78f64d0db3dffb5f299e3a616e4ac48/scipion-app-3.0.5.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.5 2025-09-16T22:01:00,364 Found link https://files.pythonhosted.org/packages/e3/61/0d3d50cbcc122c410f0ea78af183f6a5031328d2320d88c16f007b06a2dd/scipion-app-3.0.6.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.6 2025-09-16T22:01:00,365 Found link https://files.pythonhosted.org/packages/b1/2d/83fea35f1c153b2320bf539c118e98e0e78bf4efa4af7e1465468a0e4103/scipion-app-3.0.7.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.7 2025-09-16T22:01:00,365 Found link https://files.pythonhosted.org/packages/1c/69/1d2d3014c317dd46dc7b6f9439f2a973152b073d440ae49357c2ab53b5c6/scipion-app-3.0.8.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.8 2025-09-16T22:01:00,366 Found link https://files.pythonhosted.org/packages/55/e4/0a69330bfd64be774f3f3fbdb42a3198ea8babfeb2e4123a1dec92893e92/scipion-app-3.0.9.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.9 2025-09-16T22:01:00,367 Found link https://files.pythonhosted.org/packages/2d/3c/22659cc2ef3cdc69569cc6498bd62f286bf2e4d6ae65e36c8576a2e12b9d/scipion-app-3.0.10.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.10 2025-09-16T22:01:00,368 Found link https://files.pythonhosted.org/packages/29/b7/5f3d413f896049aac24e88a4087abf848e93e2ac5230e50d7abacbe8e072/scipion-app-3.0.11.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.11 2025-09-16T22:01:00,368 Found link https://files.pythonhosted.org/packages/a8/7b/96a6d3d6728d1d632dce62b3c070f1c3d6fafc436a8c62a6d453663d4c37/scipion-app-3.0.12.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.0.12 2025-09-16T22:01:00,369 Found link https://files.pythonhosted.org/packages/e3/bd/23e8be4c45feebff9a472d187934fafb07262ae064a70fcc9417610a920c/scipion-app-3.1.0.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.1.0 2025-09-16T22:01:00,369 Found link https://files.pythonhosted.org/packages/2c/4b/41609aee02e225e41120218241bf127680da8e3098b916d40e64b9f63516/scipion-app-3.3.0.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.3.0 2025-09-16T22:01:00,370 Found link https://files.pythonhosted.org/packages/69/62/3794b41779ed2018c4e8a651411ab46b7b302c81e8d55be0611c50eb3450/scipion-app-3.3.1.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.3.1 2025-09-16T22:01:00,370 Found link https://files.pythonhosted.org/packages/b4/05/11bfa61a38945c7b228df874284613ca8b271bc2e0b1bc32bf713f47562b/scipion_app-3.4.0.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.4.0 2025-09-16T22:01:00,371 Found link https://files.pythonhosted.org/packages/02/54/eddd711c4b07d70e76276b0182fcc283c31faaf916e4f0dfb19700a686e6/scipion_app-3.5.0.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.5.0 2025-09-16T22:01:00,372 Found link https://files.pythonhosted.org/packages/45/0c/5ca11803ad58485b3f5df27c4722b9d410eb3d3f2da6b5389f95871961fb/scipion_app-3.6.0.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.6.0 2025-09-16T22:01:00,372 Found link https://files.pythonhosted.org/packages/f0/d3/9274b56a0aef620bcfae2f34b3b1f82db74c4810022f6f406ea7e5950039/scipion_app-3.6.1.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.6.1 2025-09-16T22:01:00,373 Found link https://files.pythonhosted.org/packages/18/e4/d8d1c4ce10821bbcd5423756116945cd7d1b3fa1dda735c6b4080450848a/scipion_app-3.7.0.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.7.0 2025-09-16T22:01:00,374 Found link https://files.pythonhosted.org/packages/9c/9e/8b359d5b203b5570e0d78977d1f04a74cddb466d56dc4eca4908ee69fbe4/scipion_app-3.7.1.tar.gz (from https://pypi.org/simple/scipion-app/), version: 3.7.1 2025-09-16T22:01:00,374 Skipping link: No binaries permitted for scipion-app: https://files.pythonhosted.org/packages/5d/63/2440a39ed0da18a9aa563c77ff750f6462f7025737da4bb4c4714c68d841/scipion_app-3.8.1-py3-none-any.whl (from https://pypi.org/simple/scipion-app/) (requires-python:>=3.8) 2025-09-16T22:01:00,375 Found link https://files.pythonhosted.org/packages/71/5a/9662751a55f3d18d9fd5a2956fbc37a0c611c8a806754dd157af6d772a70/scipion_app-3.8.1.tar.gz (from https://pypi.org/simple/scipion-app/) (requires-python:>=3.8), version: 3.8.1 2025-09-16T22:01:00,376 Skipping link: No binaries permitted for scipion-app: https://files.pythonhosted.org/packages/22/0e/351326ff50f7f163a0c055b46bbfdbce242084e2333b20f706d25d33f184/scipion_app-3.8.2-py3-none-any.whl (from https://pypi.org/simple/scipion-app/) (requires-python:>=3.8) 2025-09-16T22:01:00,377 Found link https://files.pythonhosted.org/packages/69/2b/47fd1da331f46e1e1233bf3c80b8b1f9d11edef7f0e37eb361f4296bada1/scipion_app-3.8.2.tar.gz (from https://pypi.org/simple/scipion-app/) (requires-python:>=3.8), version: 3.8.2 2025-09-16T22:01:00,378 Fetching project page and analyzing links: https://www.piwheels.org/simple/scipion-app/ 2025-09-16T22:01:00,379 Getting page https://www.piwheels.org/simple/scipion-app/ 2025-09-16T22:01:00,380 Found index url https://www.piwheels.org/simple 2025-09-16T22:01:00,544 Fetched page https://www.piwheels.org/simple/scipion-app/ as text/html 2025-09-16T22:01:00,552 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.8.1-py3-none-any.whl#sha256=c45fe9bf907aefc5a46afdb16a99efae669a5673351e0fb948302bba24534e8a (from https://www.piwheels.org/simple/scipion-app/) (requires-python:>=3.8) 2025-09-16T22:01:00,553 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.7.1-py3-none-any.whl#sha256=9cddb34621af7128367f29093e37479e0fe46d25a0cdca193d9630ba8854254f (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,553 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.7.0-py3-none-any.whl#sha256=67424df6a851530457ca5f597031c9dafa50fc3c819aeb496d70adb7631ab71e (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,554 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.6.1-py3-none-any.whl#sha256=35fb13637420325e24f5c2653325f378ad2677c82e7ff5baeb87d6a0af48d0a3 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,554 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.6.0-py3-none-any.whl#sha256=3a90f69d4c74a0356c37ff36563810a258bca51db64723c56529ac4360a11386 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,555 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.5.0-py3-none-any.whl#sha256=b68cf628c77c708c8361a3fba32a927f99ed1036d5bafd290de434a1c658db91 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,555 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.4.0-py3-none-any.whl#sha256=fbd02cdefd8c894b78c93ea2f86de2c1020b566be5825755c9c80e6b32731418 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,556 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.3.1-py3-none-any.whl#sha256=3dd5efb67ab180dbb4758d6f96c24f2cb60a23d23caba312d3594f5563c7cdda (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,556 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.3.0-py3-none-any.whl#sha256=b79f846d333837b2a478602c57389203a27085c9534ba1d39b18f1889942a98d (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,557 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.1.0-py3-none-any.whl#sha256=8f703ac33a45349e1f7142edfa80870c45ccfe3a0a275d78152aad22e9ed7bfc (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,557 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.12-py3-none-any.whl#sha256=e7185ef77a9a954e9107b1f678ebcd022fb5a013c3c396e2fadc68e4b878c439 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,558 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.11-py3-none-any.whl#sha256=9b9af188251b64eb7787d4a1be41b5a9eee7bf0e1e3ad2a9596e388e47b63d15 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,558 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.10-py3-none-any.whl#sha256=46a9b9547ad49180b2ead769963119bbe4e3aa0fb32379576e65ebc2282ce25d (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,559 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.9-py3-none-any.whl#sha256=fe852ea60d385cd53b033ee1e22265abaf048a1b59720dbcbee3ab36e3585bce (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,560 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.8-py3-none-any.whl#sha256=69969a5e1ab31bf8bbabc1f769051baf37a59a5e529ab0de422fc8d19d720751 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,560 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.7-py3-none-any.whl#sha256=a81d61d34e1b48a7135f8d988bd48a528620d635ee76c78fd15b54535f6e6ac3 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,561 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.6-py3-none-any.whl#sha256=fd9fce94dd839ae7029d0b4b2920862c59785841ce9cae311d8a99e090d6154b (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,561 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.5-py3-none-any.whl#sha256=301fb0231114d289a903c857e64a82bdf386094fa94825bbd1cc8afd7b15a9a2 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,562 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.4-py3-none-any.whl#sha256=6aaa84bd97fec9468e59d9a8cbff472313d56fcac717ee644001c8319540df00 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,562 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.3-py3-none-any.whl#sha256=29a1c91db892354bfd7f7502128af3c3f8785fc501297d3745b97416371f6933 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,563 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.2-py3-none-any.whl#sha256=d58307ddee4efa7c1a41ccbcc5e902d768fc27aaba788f6a89fed7194bdb68f2 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,563 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.1-py3-none-any.whl#sha256=a9b97cd9d640b7025e4c5f464b0a5beedad4b185682b963a7aba0f8b050d3309 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,564 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.1b3-py3-none-any.whl#sha256=3996ba8241cbfd05908b7d8af3283902c36c906704c4c76fbe9d66737929b494 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,564 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.1b1-py3-none-any.whl#sha256=8d8631f8ec5104b6456c62221dcd78b38c9bf6349ce7909f608ed9c35f74b660 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,565 Skipping link: No binaries permitted for scipion-app: https://archive1.piwheels.org/simple/scipion-app/scipion_app-3.0.1a1-py3-none-any.whl#sha256=b3dd8385e30cdbf1514d86ed8cf1c2e8877bceded9bc61011ed8ba40f6365224 (from https://www.piwheels.org/simple/scipion-app/) 2025-09-16T22:01:00,566 Skipping link: not a file: https://www.piwheels.org/simple/scipion-app/ 2025-09-16T22:01:00,567 Skipping link: not a file: https://pypi.org/simple/scipion-app/ 2025-09-16T22:01:00,590 Given no hashes to check 1 links for project 'scipion-app': discarding no candidates 2025-09-16T22:01:00,608 Collecting scipion-app==3.8.2 2025-09-16T22:01:00,610 Created temporary directory: /tmp/pip-unpack-7jh2tv4s 2025-09-16T22:01:00,825 Downloading scipion_app-3.8.2.tar.gz (83 kB) 2025-09-16T22:01:00,964 Added scipion-app==3.8.2 from https://files.pythonhosted.org/packages/69/2b/47fd1da331f46e1e1233bf3c80b8b1f9d11edef7f0e37eb361f4296bada1/scipion_app-3.8.2.tar.gz to build tracker '/tmp/pip-build-tracker-h3okzgud' 2025-09-16T22:01:00,970 Created temporary directory: /tmp/pip-build-env-dvcz95dj 2025-09-16T22:01:00,974 Installing build dependencies: started 2025-09-16T22:01:00,976 Running command pip subprocess to install build dependencies 2025-09-16T22:01:02,104 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-09-16T22:01:02,692 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-09-16T22:01:02,715 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-16T22:01:04,482 Collecting setuptools>=42 2025-09-16T22:01:04,573 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-09-16T22:01:04,848 Collecting wheel 2025-09-16T22:01:04,868 Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB) 2025-09-16T22:01:07,927 Installing collected packages: wheel, setuptools 2025-09-16T22:01:08,158 Creating /tmp/pip-build-env-dvcz95dj/overlay/local/bin 2025-09-16T22:01:08,160 changing mode of /tmp/pip-build-env-dvcz95dj/overlay/local/bin/wheel to 755 2025-09-16T22:01:11,780 Successfully installed setuptools-80.9.0 wheel-0.45.1 2025-09-16T22:01:12,050 Installing build dependencies: finished with status 'done' 2025-09-16T22:01:12,057 Getting requirements to build wheel: started 2025-09-16T22:01:12,059 Running command Getting requirements to build wheel 2025-09-16T22:01:12,647 No `packages` or `py_modules` configuration, performing automatic discovery. 2025-09-16T22:01:12,648 `flat-layout` detected -- analysing . 2025-09-16T22:01:12,665 discovered packages -- ['scipion', 'scipion.tests', 'scipion.scripts', 'scipion.install', 'scipion.templates'] 2025-09-16T22:01:12,670 /tmp/pip-build-env-dvcz95dj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-09-16T22:01:12,670 !! 2025-09-16T22:01:12,671 ******************************************************************************** 2025-09-16T22:01:12,672 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-09-16T22:01:12,673 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-09-16T22:01:12,674 or your builds will no longer be supported. 2025-09-16T22:01:12,675 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-16T22:01:12,676 ******************************************************************************** 2025-09-16T22:01:12,677 !! 2025-09-16T22:01:12,677 corresp(dist, value, root_dir) 2025-09-16T22:01:12,764 running egg_info 2025-09-16T22:01:12,771 writing scipion_app.egg-info/PKG-INFO 2025-09-16T22:01:12,775 writing dependency_links to scipion_app.egg-info/dependency_links.txt 2025-09-16T22:01:12,777 writing entry points to scipion_app.egg-info/entry_points.txt 2025-09-16T22:01:12,778 writing requirements to scipion_app.egg-info/requires.txt 2025-09-16T22:01:12,780 writing top-level names to scipion_app.egg-info/top_level.txt 2025-09-16T22:01:12,807 reading manifest file 'scipion_app.egg-info/SOURCES.txt' 2025-09-16T22:01:12,811 reading manifest template 'MANIFEST.in' 2025-09-16T22:01:12,813 warning: no files found matching 'LICENSE' 2025-09-16T22:01:12,814 adding license file 'LICENSE.txt' 2025-09-16T22:01:12,817 writing manifest file 'scipion_app.egg-info/SOURCES.txt' 2025-09-16T22:01:12,914 Getting requirements to build wheel: finished with status 'done' 2025-09-16T22:01:12,917 Created temporary directory: /tmp/pip-modern-metadata-st3xvgyu 2025-09-16T22:01:12,919 Preparing metadata (pyproject.toml): started 2025-09-16T22:01:12,920 Running command Preparing metadata (pyproject.toml) 2025-09-16T22:01:13,477 No `packages` or `py_modules` configuration, performing automatic discovery. 2025-09-16T22:01:13,478 `flat-layout` detected -- analysing . 2025-09-16T22:01:13,494 discovered packages -- ['scipion', 'scipion.tests', 'scipion.scripts', 'scipion.install', 'scipion.templates'] 2025-09-16T22:01:13,498 /tmp/pip-build-env-dvcz95dj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-09-16T22:01:13,499 !! 2025-09-16T22:01:13,500 ******************************************************************************** 2025-09-16T22:01:13,500 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-09-16T22:01:13,501 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-09-16T22:01:13,501 or your builds will no longer be supported. 2025-09-16T22:01:13,502 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-16T22:01:13,503 ******************************************************************************** 2025-09-16T22:01:13,504 !! 2025-09-16T22:01:13,504 corresp(dist, value, root_dir) 2025-09-16T22:01:13,592 running dist_info 2025-09-16T22:01:13,604 creating /tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info 2025-09-16T22:01:13,606 writing /tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info/PKG-INFO 2025-09-16T22:01:13,609 writing dependency_links to /tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info/dependency_links.txt 2025-09-16T22:01:13,611 writing entry points to /tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info/entry_points.txt 2025-09-16T22:01:13,613 writing requirements to /tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info/requires.txt 2025-09-16T22:01:13,614 writing top-level names to /tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info/top_level.txt 2025-09-16T22:01:13,616 writing manifest file '/tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info/SOURCES.txt' 2025-09-16T22:01:13,641 reading manifest file '/tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info/SOURCES.txt' 2025-09-16T22:01:13,644 reading manifest template 'MANIFEST.in' 2025-09-16T22:01:13,646 warning: no files found matching 'LICENSE' 2025-09-16T22:01:13,647 adding license file 'LICENSE.txt' 2025-09-16T22:01:13,651 writing manifest file '/tmp/pip-modern-metadata-st3xvgyu/scipion_app.egg-info/SOURCES.txt' 2025-09-16T22:01:13,652 creating '/tmp/pip-modern-metadata-st3xvgyu/scipion_app-3.8.2.dist-info' 2025-09-16T22:01:13,777 Preparing metadata (pyproject.toml): finished with status 'done' 2025-09-16T22:01:13,781 Source in /tmp/pip-wheel-uivgfyv9/scipion-app_04b9ef30e80148aab40e8284d49c2f3c has version 3.8.2, which satisfies requirement scipion-app==3.8.2 from https://files.pythonhosted.org/packages/69/2b/47fd1da331f46e1e1233bf3c80b8b1f9d11edef7f0e37eb361f4296bada1/scipion_app-3.8.2.tar.gz 2025-09-16T22:01:13,782 Removed scipion-app==3.8.2 from https://files.pythonhosted.org/packages/69/2b/47fd1da331f46e1e1233bf3c80b8b1f9d11edef7f0e37eb361f4296bada1/scipion_app-3.8.2.tar.gz from build tracker '/tmp/pip-build-tracker-h3okzgud' 2025-09-16T22:01:13,787 Created temporary directory: /tmp/pip-unpack-8j8gafvn 2025-09-16T22:01:13,788 Building wheels for collected packages: scipion-app 2025-09-16T22:01:13,793 Created temporary directory: /tmp/pip-wheel-f164wh0g 2025-09-16T22:01:13,793 Destination directory: /tmp/pip-wheel-f164wh0g 2025-09-16T22:01:13,796 Building wheel for scipion-app (pyproject.toml): started 2025-09-16T22:01:13,797 Running command Building wheel for scipion-app (pyproject.toml) 2025-09-16T22:01:14,333 No `packages` or `py_modules` configuration, performing automatic discovery. 2025-09-16T22:01:14,334 `flat-layout` detected -- analysing . 2025-09-16T22:01:14,349 discovered packages -- ['scipion', 'scipion.tests', 'scipion.scripts', 'scipion.install', 'scipion.templates'] 2025-09-16T22:01:14,353 /tmp/pip-build-env-dvcz95dj/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-09-16T22:01:14,354 !! 2025-09-16T22:01:14,355 ******************************************************************************** 2025-09-16T22:01:14,356 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-09-16T22:01:14,357 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-09-16T22:01:14,357 or your builds will no longer be supported. 2025-09-16T22:01:14,358 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-16T22:01:14,359 ******************************************************************************** 2025-09-16T22:01:14,360 !! 2025-09-16T22:01:14,361 corresp(dist, value, root_dir) 2025-09-16T22:01:14,434 running bdist_wheel 2025-09-16T22:01:14,455 running build 2025-09-16T22:01:14,455 running build_py 2025-09-16T22:01:14,462 creating build/lib/scipion 2025-09-16T22:01:14,464 copying scipion/constants.py -> build/lib/scipion 2025-09-16T22:01:14,466 copying scipion/utils.py -> build/lib/scipion 2025-09-16T22:01:14,468 copying scipion/guiplugin.py -> build/lib/scipion 2025-09-16T22:01:14,470 copying scipion/__init__.py -> build/lib/scipion 2025-09-16T22:01:14,471 copying scipion/__main__.py -> build/lib/scipion 2025-09-16T22:01:14,475 creating build/lib/scipion/tests 2025-09-16T22:01:14,476 copying scipion/tests/installation.py -> build/lib/scipion/tests 2025-09-16T22:01:14,478 creating build/lib/scipion/scripts 2025-09-16T22:01:14,479 copying scipion/scripts/fontbrowser.py -> build/lib/scipion/scripts 2025-09-16T22:01:14,482 copying scipion/scripts/config.py -> build/lib/scipion/scripts 2025-09-16T22:01:14,484 copying scipion/scripts/tutorial.py -> build/lib/scipion/scripts 2025-09-16T22:01:14,487 copying scipion/scripts/__init__.py -> build/lib/scipion/scripts 2025-09-16T22:01:14,488 copying scipion/scripts/kickoff.py -> build/lib/scipion/scripts 2025-09-16T22:01:14,492 creating build/lib/scipion/install 2025-09-16T22:01:14,493 copying scipion/install/find_deps.py -> build/lib/scipion/install 2025-09-16T22:01:14,496 copying scipion/install/clean.py -> build/lib/scipion/install 2025-09-16T22:01:14,498 copying scipion/install/install_plugin.py -> build/lib/scipion/install 2025-09-16T22:01:14,500 copying scipion/install/change_rpath.py -> build/lib/scipion/install 2025-09-16T22:01:14,502 copying scipion/install/plugin_funcs.py -> build/lib/scipion/install 2025-09-16T22:01:14,504 copying scipion/install/funcs.py -> build/lib/scipion/install 2025-09-16T22:01:14,507 copying scipion/install/__init__.py -> build/lib/scipion/install 2025-09-16T22:01:14,509 copying scipion/install/plugin_manager.py -> build/lib/scipion/install 2025-09-16T22:01:14,512 copying scipion/install/update_manager.py -> build/lib/scipion/install 2025-09-16T22:01:14,514 copying scipion/install/inspect_plugins.py -> build/lib/scipion/install 2025-09-16T22:01:14,517 running egg_info 2025-09-16T22:01:14,529 writing scipion_app.egg-info/PKG-INFO 2025-09-16T22:01:14,532 writing dependency_links to scipion_app.egg-info/dependency_links.txt 2025-09-16T22:01:14,534 writing entry points to scipion_app.egg-info/entry_points.txt 2025-09-16T22:01:14,536 writing requirements to scipion_app.egg-info/requires.txt 2025-09-16T22:01:14,537 writing top-level names to scipion_app.egg-info/top_level.txt 2025-09-16T22:01:14,551 reading manifest file 'scipion_app.egg-info/SOURCES.txt' 2025-09-16T22:01:14,555 reading manifest template 'MANIFEST.in' 2025-09-16T22:01:14,557 warning: no files found matching 'LICENSE' 2025-09-16T22:01:14,557 adding license file 'LICENSE.txt' 2025-09-16T22:01:14,561 writing manifest file 'scipion_app.egg-info/SOURCES.txt' 2025-09-16T22:01:14,566 creating build/lib/scipion/templates 2025-09-16T22:01:14,567 copying scipion/templates/hosts.template -> build/lib/scipion/templates 2025-09-16T22:01:14,570 copying scipion/templates/protocols.template -> build/lib/scipion/templates 2025-09-16T22:01:14,572 copying scipion/templates/workflow_tutorial_intro.json -> build/lib/scipion/templates 2025-09-16T22:01:14,575 copying scipion/templates/workflow_betagal2.json -> build/lib/scipion/templates 2025-09-16T22:01:14,578 copying scipion/templates/workflow_betagal1.json -> build/lib/scipion/templates 2025-09-16T22:01:14,595 installing to build/bdist.linux-armv7l/wheel 2025-09-16T22:01:14,595 running install 2025-09-16T22:01:14,618 running install_lib 2025-09-16T22:01:14,625 creating build/bdist.linux-armv7l/wheel 2025-09-16T22:01:14,627 creating build/bdist.linux-armv7l/wheel/scipion 2025-09-16T22:01:14,628 copying build/lib/scipion/constants.py -> build/bdist.linux-armv7l/wheel/./scipion 2025-09-16T22:01:14,630 creating build/bdist.linux-armv7l/wheel/scipion/tests 2025-09-16T22:01:14,631 copying build/lib/scipion/tests/installation.py -> build/bdist.linux-armv7l/wheel/./scipion/tests 2025-09-16T22:01:14,633 copying build/lib/scipion/utils.py -> build/bdist.linux-armv7l/wheel/./scipion 2025-09-16T22:01:14,635 creating build/bdist.linux-armv7l/wheel/scipion/scripts 2025-09-16T22:01:14,636 copying build/lib/scipion/scripts/fontbrowser.py -> build/bdist.linux-armv7l/wheel/./scipion/scripts 2025-09-16T22:01:14,638 copying build/lib/scipion/scripts/config.py -> build/bdist.linux-armv7l/wheel/./scipion/scripts 2025-09-16T22:01:14,641 copying build/lib/scipion/scripts/tutorial.py -> build/bdist.linux-armv7l/wheel/./scipion/scripts 2025-09-16T22:01:14,643 copying build/lib/scipion/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/./scipion/scripts 2025-09-16T22:01:14,645 copying build/lib/scipion/scripts/kickoff.py -> build/bdist.linux-armv7l/wheel/./scipion/scripts 2025-09-16T22:01:14,648 creating build/bdist.linux-armv7l/wheel/scipion/install 2025-09-16T22:01:14,649 copying build/lib/scipion/install/find_deps.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,652 copying build/lib/scipion/install/clean.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,653 copying build/lib/scipion/install/install_plugin.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,656 copying build/lib/scipion/install/change_rpath.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,658 copying build/lib/scipion/install/plugin_funcs.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,660 copying build/lib/scipion/install/funcs.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,663 copying build/lib/scipion/install/__init__.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,665 copying build/lib/scipion/install/plugin_manager.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,668 copying build/lib/scipion/install/update_manager.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,670 copying build/lib/scipion/install/inspect_plugins.py -> build/bdist.linux-armv7l/wheel/./scipion/install 2025-09-16T22:01:14,672 copying build/lib/scipion/guiplugin.py -> build/bdist.linux-armv7l/wheel/./scipion 2025-09-16T22:01:14,675 creating build/bdist.linux-armv7l/wheel/scipion/templates 2025-09-16T22:01:14,676 copying build/lib/scipion/templates/workflow_tutorial_intro.json -> build/bdist.linux-armv7l/wheel/./scipion/templates 2025-09-16T22:01:14,678 copying build/lib/scipion/templates/hosts.template -> build/bdist.linux-armv7l/wheel/./scipion/templates 2025-09-16T22:01:14,680 copying build/lib/scipion/templates/workflow_betagal2.json -> build/bdist.linux-armv7l/wheel/./scipion/templates 2025-09-16T22:01:14,682 copying build/lib/scipion/templates/workflow_betagal1.json -> build/bdist.linux-armv7l/wheel/./scipion/templates 2025-09-16T22:01:14,684 copying build/lib/scipion/templates/protocols.template -> build/bdist.linux-armv7l/wheel/./scipion/templates 2025-09-16T22:01:14,685 copying build/lib/scipion/__init__.py -> build/bdist.linux-armv7l/wheel/./scipion 2025-09-16T22:01:14,687 copying build/lib/scipion/__main__.py -> build/bdist.linux-armv7l/wheel/./scipion 2025-09-16T22:01:14,689 running install_egg_info 2025-09-16T22:01:14,695 Copying scipion_app.egg-info to build/bdist.linux-armv7l/wheel/./scipion_app-3.8.2-py3.11.egg-info 2025-09-16T22:01:14,706 running install_scripts 2025-09-16T22:01:14,717 creating build/bdist.linux-armv7l/wheel/scipion_app-3.8.2.dist-info/WHEEL 2025-09-16T22:01:14,720 creating '/tmp/pip-wheel-f164wh0g/.tmp-_319bcld/scipion_app-3.8.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-16T22:01:14,722 adding 'scipion/__init__.py' 2025-09-16T22:01:14,725 adding 'scipion/__main__.py' 2025-09-16T22:01:14,727 adding 'scipion/constants.py' 2025-09-16T22:01:14,728 adding 'scipion/guiplugin.py' 2025-09-16T22:01:14,730 adding 'scipion/utils.py' 2025-09-16T22:01:14,731 adding 'scipion/install/__init__.py' 2025-09-16T22:01:14,733 adding 'scipion/install/change_rpath.py' 2025-09-16T22:01:14,734 adding 'scipion/install/clean.py' 2025-09-16T22:01:14,736 adding 'scipion/install/find_deps.py' 2025-09-16T22:01:14,744 adding 'scipion/install/funcs.py' 2025-09-16T22:01:14,746 adding 'scipion/install/inspect_plugins.py' 2025-09-16T22:01:14,748 adding 'scipion/install/install_plugin.py' 2025-09-16T22:01:14,751 adding 'scipion/install/plugin_funcs.py' 2025-09-16T22:01:14,757 adding 'scipion/install/plugin_manager.py' 2025-09-16T22:01:14,759 adding 'scipion/install/update_manager.py' 2025-09-16T22:01:14,761 adding 'scipion/scripts/__init__.py' 2025-09-16T22:01:14,763 adding 'scipion/scripts/config.py' 2025-09-16T22:01:14,765 adding 'scipion/scripts/fontbrowser.py' 2025-09-16T22:01:14,768 adding 'scipion/scripts/kickoff.py' 2025-09-16T22:01:14,769 adding 'scipion/scripts/tutorial.py' 2025-09-16T22:01:14,771 adding 'scipion/templates/hosts.template' 2025-09-16T22:01:14,773 adding 'scipion/templates/protocols.template' 2025-09-16T22:01:14,774 adding 'scipion/templates/workflow_betagal1.json' 2025-09-16T22:01:14,775 adding 'scipion/templates/workflow_betagal2.json' 2025-09-16T22:01:14,777 adding 'scipion/templates/workflow_tutorial_intro.json' 2025-09-16T22:01:14,779 adding 'scipion/tests/installation.py' 2025-09-16T22:01:14,786 adding 'scipion_app-3.8.2.dist-info/licenses/LICENSE.txt' 2025-09-16T22:01:14,788 adding 'scipion_app-3.8.2.dist-info/METADATA' 2025-09-16T22:01:14,789 adding 'scipion_app-3.8.2.dist-info/WHEEL' 2025-09-16T22:01:14,790 adding 'scipion_app-3.8.2.dist-info/entry_points.txt' 2025-09-16T22:01:14,791 adding 'scipion_app-3.8.2.dist-info/top_level.txt' 2025-09-16T22:01:14,792 adding 'scipion_app-3.8.2.dist-info/RECORD' 2025-09-16T22:01:14,794 removing build/bdist.linux-armv7l/wheel 2025-09-16T22:01:14,901 Building wheel for scipion-app (pyproject.toml): finished with status 'done' 2025-09-16T22:01:14,907 Created wheel for scipion-app: filename=scipion_app-3.8.2-py3-none-any.whl size=92730 sha256=60acbc0a46fe9df6e6486f45e7baa1e5d1d72f92c63acc9f3ad8450bf9b1a3e3 2025-09-16T22:01:14,908 Stored in directory: /tmp/pip-ephem-wheel-cache-f4i7c0nx/wheels/17/13/f6/491d5b786b57acb0026204ffd2c4981ea053e0a24eef377789 2025-09-16T22:01:14,920 Successfully built scipion-app 2025-09-16T22:01:14,926 Removed build tracker: '/tmp/pip-build-tracker-h3okzgud'