2025-09-17T08:51:11,224 Created temporary directory: /tmp/pip-ephem-wheel-cache-gkay59oj 2025-09-17T08:51:11,226 Created temporary directory: /tmp/pip-build-tracker-l96u04f9 2025-09-17T08:51:11,226 Initialized build tracking at /tmp/pip-build-tracker-l96u04f9 2025-09-17T08:51:11,227 Created build tracker: /tmp/pip-build-tracker-l96u04f9 2025-09-17T08:51:11,227 Entered build tracker: /tmp/pip-build-tracker-l96u04f9 2025-09-17T08:51:11,228 Created temporary directory: /tmp/pip-wheel-ax345lqj 2025-09-17T08:51:11,231 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-09-17T08:51:11,233 Created temporary directory: /tmp/pip-ephem-wheel-cache-wq6qagje 2025-09-17T08:51:11,255 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-17T08:51:11,259 2 location(s) to search for versions of goatools: 2025-09-17T08:51:11,259 * https://pypi.org/simple/goatools/ 2025-09-17T08:51:11,259 * https://www.piwheels.org/simple/goatools/ 2025-09-17T08:51:11,260 Fetching project page and analyzing links: https://pypi.org/simple/goatools/ 2025-09-17T08:51:11,261 Getting page https://pypi.org/simple/goatools/ 2025-09-17T08:51:11,262 Found index url https://pypi.org/simple 2025-09-17T08:51:11,482 Fetched page https://pypi.org/simple/goatools/ as application/vnd.pypi.simple.v1+json 2025-09-17T08:51:11,492 Found link https://files.pythonhosted.org/packages/68/9f/aac469a604a671f2fb8af43abbc9a3baf9f4b89dc121a1069b022a01d33c/goatools-0.4.7.tar.gz (from 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https://files.pythonhosted.org/packages/09/eb/1674d7fd11d703a551590f5d7bcf7649ee4afbd7edd587d33a56b236a6ea/goatools-1.0.15.tar.gz (from https://pypi.org/simple/goatools/), version: 1.0.15 2025-09-17T08:51:11,511 Found link https://files.pythonhosted.org/packages/05/47/9ec1fb82d10a121ce7253ccb20aed7f94a4e3f17e4e78c30bde5f2fe20d3/goatools-1.1.5.tar.gz (from https://pypi.org/simple/goatools/), version: 1.1.5 2025-09-17T08:51:11,511 Found link https://files.pythonhosted.org/packages/d5/b2/01bd60558bfb805d584794f47731998846d7f18e412feb9b8053594ea331/goatools-1.1.6.tar.gz (from https://pypi.org/simple/goatools/), version: 1.1.6 2025-09-17T08:51:11,512 Found link https://files.pythonhosted.org/packages/85/eb/2ce101be2d37028d8727431fb3afd2c19adc57c33236b1e4b9021cba06b7/goatools-1.1.12.tar.gz (from https://pypi.org/simple/goatools/), version: 1.1.12 2025-09-17T08:51:11,513 Found link https://files.pythonhosted.org/packages/e8/8f/b0520563d521c670627b2b636f0480613444c04395eb95a0177269b4fb6b/goatools-1.2.3.tar.gz (from https://pypi.org/simple/goatools/), version: 1.2.3 2025-09-17T08:51:11,513 Skipping link: No binaries permitted for goatools: https://files.pythonhosted.org/packages/26/16/eea88e34534664ccac4be340e1c70763bf1277cbb20aa328a4630ce9daf8/goatools-1.2.4-py3-none-any.whl (from https://pypi.org/simple/goatools/) 2025-09-17T08:51:11,514 Found link https://files.pythonhosted.org/packages/e5/0d/f95ca21e321bf9ef146885548b6d7d6f564e744c2020578575fda9db8d06/goatools-1.2.4.tar.gz (from https://pypi.org/simple/goatools/), version: 1.2.4 2025-09-17T08:51:11,514 Skipping link: No binaries permitted for goatools: https://files.pythonhosted.org/packages/60/6d/3abdbd7b013c86b700c66858f105148a001108715a1ae7efa967594ae2d2/goatools-1.3.1-py3-none-any.whl (from https://pypi.org/simple/goatools/) 2025-09-17T08:51:11,515 Found link 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https://files.pythonhosted.org/packages/58/e8/f9db432e8db90662ac831cd3b9fdbadd5045e9987089fdb85b487ebb9f3c/goatools-1.4.11.tar.gz (from https://pypi.org/simple/goatools/), version: 1.4.11 2025-09-17T08:51:11,523 Skipping link: No binaries permitted for goatools: https://files.pythonhosted.org/packages/bb/10/26a7b67132b9af0473ca4eef38ccc2ca8f4afd37f3ab3c451d5d096a1f32/goatools-1.4.12-py3-none-any.whl (from https://pypi.org/simple/goatools/) 2025-09-17T08:51:11,523 Found link https://files.pythonhosted.org/packages/0c/c5/140ad4b879d9a05d83586887fe795c1286768eb11eedd29be3206fdb8bc5/goatools-1.4.12.tar.gz (from https://pypi.org/simple/goatools/), version: 1.4.12 2025-09-17T08:51:11,524 Skipping link: No binaries permitted for goatools: https://files.pythonhosted.org/packages/eb/8d/9a11534b3a7b597085dbc42959a244dcefda42cd21831e2976c3628d343b/goatools-1.5.1-py3-none-any.whl (from https://pypi.org/simple/goatools/) 2025-09-17T08:51:11,525 Found link https://files.pythonhosted.org/packages/77/b0/ed82496ef08fdd6435a60ae1fd6677bdf5f48f5225d065336b099b22bf49/goatools-1.5.1.tar.gz (from https://pypi.org/simple/goatools/), version: 1.5.1 2025-09-17T08:51:11,525 Skipping link: No binaries permitted for goatools: https://files.pythonhosted.org/packages/c3/0a/f2c3fd69961ea0b9bac796e43a29f283771d20119f09186e7d5f5c8e2ab6/goatools-1.5.2-py3-none-any.whl (from https://pypi.org/simple/goatools/) 2025-09-17T08:51:11,526 Found link https://files.pythonhosted.org/packages/9d/da/4369da7b0aa00ccc59e405dc54fa6ec6f0be92020c8031d247bc50d78ffc/goatools-1.5.2.tar.gz (from https://pypi.org/simple/goatools/), version: 1.5.2 2025-09-17T08:51:11,527 Fetching project page and analyzing links: https://www.piwheels.org/simple/goatools/ 2025-09-17T08:51:11,527 Getting page https://www.piwheels.org/simple/goatools/ 2025-09-17T08:51:11,528 Found index url https://www.piwheels.org/simple 2025-09-17T08:51:11,690 Fetched page https://www.piwheels.org/simple/goatools/ as text/html 2025-09-17T08:51:11,701 Skipping link: No binaries permitted for goatools: https://www.piwheels.org/simple/goatools/goatools-1.5.1-py3-none-any.whl#sha256=549d67bb304ba614e36de4f7abd0facb4e673974d15270d38267f0f3d3174d9d (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,701 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.4.12-py3-none-any.whl#sha256=f38fe6106431f6eb4509787df74288d708ff5c69e9ec8a15680e8e8fdb16c526 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,702 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.4.11-py3-none-any.whl#sha256=7c6896cb18a770b183ad88ac8a808051312c341aa7bac88146c0f591573c3b69 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,703 Skipping link: No binaries permitted for goatools: 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https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,705 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.3.9-py3-none-any.whl#sha256=7cacc37a9aaa13f67d2b87688fe584090c4c2598a5b95184300adaa7bfcfa731 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,706 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.3.1-py3-none-any.whl#sha256=bb32d406a9724b4c31d6d7600179eea619b0677a6e6dc9f8c2a8cfa5bd6f8a52 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,706 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.2.4-py3-none-any.whl#sha256=a07ae3e98a1f144416d7fa34cd0730629a1052489bca6eb3fac589d0cdb53406 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,707 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.2.3-py3-none-any.whl#sha256=55596734be8cf1245358ac7e8b8410d5e8117a7ed27288cac9ee6fcffe99704f (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,708 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.1.12-py3-none-any.whl#sha256=2cc30953c3089cf43d3622cc82935f610343f4d739ab63449f6a5e14a74a7068 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,708 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.1.6-py3-none-any.whl#sha256=3bade5d5a5e498e4dea008e663843795a7efb2b9474fb1e3c63d4af13ff12f99 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,709 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.1.5-py3-none-any.whl#sha256=4f092932e776d1f66c11c93dfaca24d1935758eebaa8388226f84036f89a7989 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,709 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.0.15-py3-none-any.whl#sha256=dd611358658710b2137016ffcc5fd775cc29a3483280c2b675610b0b12dd4505 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,709 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.0.11-py3-none-any.whl#sha256=24a3091ee6f343215b594916b34496b62cdef6098ca36702f2c23b0b82690a05 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,710 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.0.6-py3-none-any.whl#sha256=9a692e573841ce36b8027da30c8eb662055d777d964fef4f987a26ebb02f6746 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,711 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.0.5-py3-none-any.whl#sha256=00bdc590629602bfe94d1887195ae76f8231a5655bbeb6776421db789c07e1f2 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,711 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-1.0.2-py3-none-any.whl#sha256=146a63128162eba0a2f6a8232b542df14ce4d7ea8d8472590f83acc53ae4c779 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,712 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.9.9-py3-none-any.whl#sha256=286e2829a302fa4987e13614764ea0e8d046864fe4802c615a15e462c6198b37 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,713 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.9.7-py3-none-any.whl#sha256=8a39a8a0ab92597c8e9bc938891e1163f23e7676b12b8f1b2fb9b8ff432012ae (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,713 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.9.5-py3-none-any.whl#sha256=5dbb616e95df394c4fb35c214bc0c61b9d0a0b3bd9c45102dc90156c3a3aa34b (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,714 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.8.12-py3-none-any.whl#sha256=ed940c4670c2f05b9f91ece64654ae838d636527b1d36ebdaff3adcd0022a2d7 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,714 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.8.9-py3-none-any.whl#sha256=de274ee9bce6f5316c9dc0f5fd35ceb94935e96f3354579e1eafbb2091dff049 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,715 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.8.4-py3-none-any.whl#sha256=551e54a0686b13d234c6434eafe1ad84abfa311d627273484d93adab903365bb (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,716 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.8.2-py3-none-any.whl#sha256=9e193a9e6d5f3e28caa897fed4d7d067aa9cd38c2c5bef0f7fcac03cbc22a508 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,716 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.7.11-py3-none-any.whl#sha256=b41292373210e0c05517a25de5e11efe8f485a607b4745b3afa5901c1cacb6e6 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,717 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.7.9-py3-none-any.whl#sha256=9eb68d0e39758ccb25cfc3ee719e311d87d70ac16bd5e2509a4ddd67c0eaae96 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,717 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.6.10-py3-none-any.whl#sha256=a96d82e9652a307d6d552babac6b578c86c28075afb21fc6783691431c530ef0 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,718 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.6.5-py3-none-any.whl#sha256=82a6218c5db350d38bd1e8dc3071694dd730141b9cf7e320fa26db1625a61a1a (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,718 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.6.4-py3-none-any.whl#sha256=a3a1b3c0d4cc6b89608026cc465c64aadca21684f6aac8a2c6dbd7311628b303 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,718 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.5.9-py3-none-any.whl#sha256=44aa1c480d762a0cafc6ba81f7698f8e35b26fdf6628b70e58c55bd38ad6a6ce (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,719 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.5.7-py3-none-any.whl#sha256=906fe9febd71c0f21fa9e24adba73b5eb2ca3b741a99b4beac91a47cc04adafc (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,720 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.5.5-py3-none-any.whl#sha256=63dca3b82fad875e114b7acae629067557173d1840e7b7a6394040124d3d271d (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,720 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.5.4-py3-none-any.whl#sha256=9912f59dfb2461143ad78d0d80cc0249a6ee57036a585e9abab5b389d90baa02 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,721 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.5.2-py3-none-any.whl#sha256=565f135baa0065bfacbb475e69a316eebda8f5054a61d19a3794a3f0b9e87a8a (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,722 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.4.12-py3-none-any.whl#sha256=d7dfb70be0c3d29b630d1a72de20e21ffe327a46bfeb546440ecbf287ccce85b (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,722 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.4.11-py3-none-any.whl#sha256=1b3be88f83abdf85ccba25f972c434227df19285d0ef2941ecdd3906c2e884fe (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,723 Skipping link: No binaries permitted for goatools: https://archive1.piwheels.org/simple/goatools/goatools-0.4.7-py3-none-any.whl#sha256=5f6053c64d50dc189971e7197bed72056cb5d64f38bf95dd4b2bb2b65b06b116 (from https://www.piwheels.org/simple/goatools/) 2025-09-17T08:51:11,723 Skipping link: not a file: https://www.piwheels.org/simple/goatools/ 2025-09-17T08:51:11,724 Skipping link: not a file: https://pypi.org/simple/goatools/ 2025-09-17T08:51:11,747 Given no hashes to check 1 links for project 'goatools': discarding no candidates 2025-09-17T08:51:11,765 Collecting goatools==1.5.2 2025-09-17T08:51:11,768 Created temporary directory: /tmp/pip-unpack-docgvpc0 2025-09-17T08:51:12,084 Downloading goatools-1.5.2.tar.gz (15.1 MB) 2025-09-17T08:51:17,787 Added goatools==1.5.2 from https://files.pythonhosted.org/packages/9d/da/4369da7b0aa00ccc59e405dc54fa6ec6f0be92020c8031d247bc50d78ffc/goatools-1.5.2.tar.gz to build tracker '/tmp/pip-build-tracker-l96u04f9' 2025-09-17T08:51:17,794 Created temporary directory: /tmp/pip-build-env-ics145u9 2025-09-17T08:51:17,798 Installing build dependencies: started 2025-09-17T08:51:17,799 Running command pip subprocess to install build dependencies 2025-09-17T08:51:18,927 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-09-17T08:51:19,481 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-09-17T08:51:19,504 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-17T08:51:21,234 Collecting setuptools 2025-09-17T08:51:21,383 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-09-17T08:51:21,784 Collecting setuptools_scm[toml] 2025-09-17T08:51:21,801 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.0-py3-none-any.whl (62 kB) 2025-09-17T08:51:21,878 Collecting setuptools_scm_git_archive 2025-09-17T08:51:21,892 Downloading https://www.piwheels.org/simple/setuptools-scm-git-archive/setuptools_scm_git_archive-1.4.1-py2.py3-none-any.whl (3.3 kB) 2025-09-17T08:51:22,114 Collecting wheel 2025-09-17T08:51:22,130 Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB) 2025-09-17T08:51:22,316 Collecting packaging>=20 2025-09-17T08:51:22,332 Using cached https://www.piwheels.org/simple/packaging/packaging-25.0-py3-none-any.whl (66 kB) 2025-09-17T08:51:25,405 Installing collected packages: setuptools_scm_git_archive, wheel, setuptools, packaging, setuptools_scm 2025-09-17T08:51:25,667 Creating /tmp/pip-build-env-ics145u9/overlay/local/bin 2025-09-17T08:51:25,669 changing mode of /tmp/pip-build-env-ics145u9/overlay/local/bin/wheel to 755 2025-09-17T08:51:29,849 changing mode of /tmp/pip-build-env-ics145u9/overlay/local/bin/setuptools-scm to 755 2025-09-17T08:51:29,885 Successfully installed packaging-25.0 setuptools-80.9.0 setuptools_scm-9.2.0 setuptools_scm_git_archive-1.4.1 wheel-0.45.1 2025-09-17T08:51:30,169 Installing build dependencies: finished with status 'done' 2025-09-17T08:51:30,175 Getting requirements to build wheel: started 2025-09-17T08:51:30,177 Running command Getting requirements to build wheel 2025-09-17T08:51:30,719 /tmp/pip-build-env-ics145u9/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-17T08:51:30,720 !! 2025-09-17T08:51:30,721 ******************************************************************************** 2025-09-17T08:51:30,721 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-17T08:51:30,723 License :: OSI Approved :: BSD License 2025-09-17T08:51:30,724 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-17T08:51:30,725 ******************************************************************************** 2025-09-17T08:51:30,726 !! 2025-09-17T08:51:30,726 self._finalize_license_expression() 2025-09-17T08:51:30,855 running egg_info 2025-09-17T08:51:30,866 writing goatools.egg-info/PKG-INFO 2025-09-17T08:51:30,870 writing dependency_links to goatools.egg-info/dependency_links.txt 2025-09-17T08:51:30,872 writing requirements to goatools.egg-info/requires.txt 2025-09-17T08:51:30,873 writing top-level names to goatools.egg-info/top_level.txt 2025-09-17T08:51:30,969 listing git files failed - pretending there aren't any 2025-09-17T08:51:30,974 reading manifest file 'goatools.egg-info/SOURCES.txt' 2025-09-17T08:51:30,985 reading manifest template 'MANIFEST.in' 2025-09-17T08:51:30,987 warning: no previously-included files matching '*' found under directory '.github' 2025-09-17T08:51:30,988 warning: no previously-included files matching '*' found under directory 'data' 2025-09-17T08:51:30,988 warning: no previously-included files matching '*' found under directory 'doc' 2025-09-17T08:51:30,989 warning: no previously-included files matching '*' found under directory 'notebooks' 2025-09-17T08:51:30,990 warning: no previously-included files matching '*' found under directory 'sphinx' 2025-09-17T08:51:30,991 warning: no previously-included files matching '*' found under directory 'tests' 2025-09-17T08:51:30,992 warning: no previously-included files found matching '.*' 2025-09-17T08:51:30,992 adding license file 'LICENSE' 2025-09-17T08:51:31,001 writing manifest file 'goatools.egg-info/SOURCES.txt' 2025-09-17T08:51:31,093 Getting requirements to build wheel: finished with status 'done' 2025-09-17T08:51:31,096 Created temporary directory: /tmp/pip-modern-metadata-drou3g4m 2025-09-17T08:51:31,099 Preparing metadata (pyproject.toml): started 2025-09-17T08:51:31,100 Running command Preparing metadata (pyproject.toml) 2025-09-17T08:51:31,703 /tmp/pip-build-env-ics145u9/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-17T08:51:31,703 !! 2025-09-17T08:51:31,704 ******************************************************************************** 2025-09-17T08:51:31,705 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-17T08:51:31,706 License :: OSI Approved :: BSD License 2025-09-17T08:51:31,707 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-17T08:51:31,707 ******************************************************************************** 2025-09-17T08:51:31,708 !! 2025-09-17T08:51:31,709 self._finalize_license_expression() 2025-09-17T08:51:31,732 running dist_info 2025-09-17T08:51:31,750 creating /tmp/pip-modern-metadata-drou3g4m/goatools.egg-info 2025-09-17T08:51:31,752 writing /tmp/pip-modern-metadata-drou3g4m/goatools.egg-info/PKG-INFO 2025-09-17T08:51:31,755 writing dependency_links to /tmp/pip-modern-metadata-drou3g4m/goatools.egg-info/dependency_links.txt 2025-09-17T08:51:31,757 writing requirements to /tmp/pip-modern-metadata-drou3g4m/goatools.egg-info/requires.txt 2025-09-17T08:51:31,758 writing top-level names to /tmp/pip-modern-metadata-drou3g4m/goatools.egg-info/top_level.txt 2025-09-17T08:51:31,760 writing manifest file '/tmp/pip-modern-metadata-drou3g4m/goatools.egg-info/SOURCES.txt' 2025-09-17T08:51:31,843 listing git files failed - pretending there aren't any 2025-09-17T08:51:31,847 reading manifest file '/tmp/pip-modern-metadata-drou3g4m/goatools.egg-info/SOURCES.txt' 2025-09-17T08:51:31,849 reading manifest template 'MANIFEST.in' 2025-09-17T08:51:31,850 warning: no previously-included files matching '*' found under directory '.github' 2025-09-17T08:51:31,851 warning: no previously-included files matching '*' found under directory 'data' 2025-09-17T08:51:31,852 warning: no previously-included files matching '*' found under directory 'doc' 2025-09-17T08:51:31,853 warning: no previously-included files matching '*' found under directory 'notebooks' 2025-09-17T08:51:31,853 warning: no previously-included files matching '*' found under directory 'sphinx' 2025-09-17T08:51:31,854 warning: no previously-included files matching '*' found under directory 'tests' 2025-09-17T08:51:31,855 warning: no previously-included files found matching '.*' 2025-09-17T08:51:31,855 adding license file 'LICENSE' 2025-09-17T08:51:31,862 writing manifest file '/tmp/pip-modern-metadata-drou3g4m/goatools.egg-info/SOURCES.txt' 2025-09-17T08:51:31,863 creating '/tmp/pip-modern-metadata-drou3g4m/goatools-1.5.2.dist-info' 2025-09-17T08:51:31,997 Preparing metadata (pyproject.toml): finished with status 'done' 2025-09-17T08:51:32,002 Source in /tmp/pip-wheel-ax345lqj/goatools_159ec8aed9664dd995ab94f98151088a has version 1.5.2, which satisfies requirement goatools==1.5.2 from https://files.pythonhosted.org/packages/9d/da/4369da7b0aa00ccc59e405dc54fa6ec6f0be92020c8031d247bc50d78ffc/goatools-1.5.2.tar.gz 2025-09-17T08:51:32,003 Removed goatools==1.5.2 from https://files.pythonhosted.org/packages/9d/da/4369da7b0aa00ccc59e405dc54fa6ec6f0be92020c8031d247bc50d78ffc/goatools-1.5.2.tar.gz from build tracker '/tmp/pip-build-tracker-l96u04f9' 2025-09-17T08:51:32,009 Created temporary directory: /tmp/pip-unpack-my8l6l3g 2025-09-17T08:51:32,009 Building wheels for collected packages: goatools 2025-09-17T08:51:32,013 Created temporary directory: /tmp/pip-wheel-c_rleo4x 2025-09-17T08:51:32,014 Destination directory: /tmp/pip-wheel-c_rleo4x 2025-09-17T08:51:32,016 Building wheel for goatools (pyproject.toml): started 2025-09-17T08:51:32,017 Running command Building wheel for goatools (pyproject.toml) 2025-09-17T08:51:32,615 /tmp/pip-build-env-ics145u9/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-17T08:51:32,616 !! 2025-09-17T08:51:32,617 ******************************************************************************** 2025-09-17T08:51:32,617 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-17T08:51:32,618 License :: OSI Approved :: BSD License 2025-09-17T08:51:32,620 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-17T08:51:32,620 ******************************************************************************** 2025-09-17T08:51:32,621 !! 2025-09-17T08:51:32,622 self._finalize_license_expression() 2025-09-17T08:51:32,650 running bdist_wheel 2025-09-17T08:51:32,687 running build 2025-09-17T08:51:32,687 running build_py 2025-09-17T08:51:32,699 creating build/lib/goatools 2025-09-17T08:51:32,701 copying goatools/wr_tbl_class.py -> build/lib/goatools 2025-09-17T08:51:32,703 copying goatools/godag_small.py -> build/lib/goatools 2025-09-17T08:51:32,705 copying goatools/multiple_testing.py -> build/lib/goatools 2025-09-17T08:51:32,708 copying goatools/wr_tbl.py -> build/lib/goatools 2025-09-17T08:51:32,710 copying goatools/version.py -> build/lib/goatools 2025-09-17T08:51:32,712 copying goatools/statsdescribe.py -> build/lib/goatools 2025-09-17T08:51:32,713 copying goatools/go_enrichment.py -> build/lib/goatools 2025-09-17T08:51:32,716 copying goatools/go_search.py -> build/lib/goatools 2025-09-17T08:51:32,718 copying goatools/__init__.py -> build/lib/goatools 2025-09-17T08:51:32,720 copying goatools/ratio.py -> build/lib/goatools 2025-09-17T08:51:32,722 copying goatools/obo_parser.py -> build/lib/goatools 2025-09-17T08:51:32,724 copying goatools/utils.py -> build/lib/goatools 2025-09-17T08:51:32,726 copying goatools/randseed.py -> build/lib/goatools 2025-09-17T08:51:32,728 copying goatools/mapslim.py -> build/lib/goatools 2025-09-17T08:51:32,730 copying goatools/base.py -> build/lib/goatools 2025-09-17T08:51:32,732 copying goatools/godag_obosm.py -> build/lib/goatools 2025-09-17T08:51:32,734 copying goatools/evidence_codes.py -> build/lib/goatools 2025-09-17T08:51:32,736 copying goatools/godag_plot.py -> build/lib/goatools 2025-09-17T08:51:32,738 copying goatools/pvalcalc.py -> build/lib/goatools 2025-09-17T08:51:32,740 copying goatools/semantic.py -> build/lib/goatools 2025-09-17T08:51:32,742 copying goatools/nt_utils.py -> build/lib/goatools 2025-09-17T08:51:32,745 copying goatools/obo_tasks.py -> build/lib/goatools 2025-09-17T08:51:32,746 copying goatools/associations.py -> build/lib/goatools 2025-09-17T08:51:32,749 creating build/lib/goatools/godag 2025-09-17T08:51:32,750 copying goatools/godag/go_tasks.py -> build/lib/goatools/godag 2025-09-17T08:51:32,752 copying goatools/godag/relationship_combos.py -> build/lib/goatools/godag 2025-09-17T08:51:32,754 copying goatools/godag/__init__.py -> build/lib/goatools/godag 2025-09-17T08:51:32,756 copying goatools/godag/reldepth.py -> build/lib/goatools/godag 2025-09-17T08:51:32,758 copying goatools/godag/prttime.py -> build/lib/goatools/godag 2025-09-17T08:51:32,759 copying goatools/godag/consts.py -> build/lib/goatools/godag 2025-09-17T08:51:32,761 copying goatools/godag/obo_optional_attributes.py -> build/lib/goatools/godag 2025-09-17T08:51:32,763 copying goatools/godag/relationship_str.py -> build/lib/goatools/godag 2025-09-17T08:51:32,765 copying goatools/godag/typedef.py -> build/lib/goatools/godag 2025-09-17T08:51:32,767 copying goatools/godag/prtfncs.py -> build/lib/goatools/godag 2025-09-17T08:51:32,770 creating build/lib/goatools/gosubdag 2025-09-17T08:51:32,771 copying goatools/gosubdag/godag_rcnt.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,773 copying goatools/gosubdag/go_most_specific.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,774 copying goatools/gosubdag/go_tasks.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,777 copying goatools/gosubdag/__init__.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,778 copying goatools/gosubdag/utils.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,780 copying goatools/gosubdag/gosubdag.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,782 copying goatools/gosubdag/godag_rcnt_init.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,784 copying goatools/gosubdag/go_edges.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,787 copying goatools/gosubdag/gosubdag_init.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,789 copying goatools/gosubdag/go_paths.py -> build/lib/goatools/gosubdag 2025-09-17T08:51:32,792 creating build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,793 copying goatools/gosubdag/plot/goea_results.py -> build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,795 copying goatools/gosubdag/plot/go_node.py -> build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,797 copying goatools/gosubdag/plot/plot.py -> build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,800 copying goatools/gosubdag/plot/__init__.py -> build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,802 copying goatools/gosubdag/plot/go_edge.py -> build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,803 copying goatools/gosubdag/plot/go2color.py -> build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,805 copying goatools/gosubdag/plot/go_name_shorten.py -> build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,808 copying goatools/gosubdag/plot/gosubdag_plot.py -> build/lib/goatools/gosubdag/plot 2025-09-17T08:51:32,811 creating build/lib/goatools/gosubdag/rpt 2025-09-17T08:51:32,812 copying goatools/gosubdag/rpt/__init__.py -> build/lib/goatools/gosubdag/rpt 2025-09-17T08:51:32,814 copying goatools/gosubdag/rpt/wr_xlsx.py -> build/lib/goatools/gosubdag/rpt 2025-09-17T08:51:32,816 copying goatools/gosubdag/rpt/write_hierarchy.py -> build/lib/goatools/gosubdag/rpt 2025-09-17T08:51:32,819 creating build/lib/goatools/test_data 2025-09-17T08:51:32,820 copying goatools/test_data/gjoneska_2015_ensmusg2symbol.py -> build/lib/goatools/test_data 2025-09-17T08:51:32,831 copying goatools/test_data/gjoneska_goea_late_decrease.py -> build/lib/goatools/test_data 2025-09-17T08:51:32,925 copying goatools/test_data/gjoneska_goea_late_increase.py -> build/lib/goatools/test_data 2025-09-17T08:51:33,034 copying goatools/test_data/godag_timed.py -> build/lib/goatools/test_data 2025-09-17T08:51:33,036 copying goatools/test_data/gjoneska_goea_consistent_decrease.py -> build/lib/goatools/test_data 2025-09-17T08:51:33,135 copying goatools/test_data/genes_NCBI_9606_ProteinCoding.py -> build/lib/goatools/test_data 2025-09-17T08:51:33,438 copying goatools/test_data/sorter.py -> build/lib/goatools/test_data 2025-09-17T08:51:33,441 copying goatools/test_data/__init__.py -> build/lib/goatools/test_data 2025-09-17T08:51:33,442 copying goatools/test_data/gjoneska_goea_transient_decrease.py -> build/lib/goatools/test_data 2025-09-17T08:51:33,545 copying goatools/test_data/genes_NCBI_10090_All.py -> build/lib/goatools/test_data 2025-09-17T08:51:33,972 copying goatools/test_data/genes_NCBI_10090_ProteinCoding.py -> build/lib/goatools/test_data 2025-09-17T08:51:34,416 copying goatools/test_data/gjoneska_goea_consistent_increase.py -> build/lib/goatools/test_data 2025-09-17T08:51:34,591 copying goatools/test_data/wr_subobo.py -> build/lib/goatools/test_data 2025-09-17T08:51:34,593 copying goatools/test_data/nature3102_goea.py -> build/lib/goatools/test_data 2025-09-17T08:51:34,595 copying goatools/test_data/gjoneska_goea_transient_increase.py -> build/lib/goatools/test_data 2025-09-17T08:51:34,708 copying goatools/test_data/gafs.py -> build/lib/goatools/test_data 2025-09-17T08:51:34,710 copying goatools/test_data/genes_NCBI_9606_All.py -> build/lib/goatools/test_data 2025-09-17T08:51:35,368 copying goatools/test_data/checks.py -> build/lib/goatools/test_data 2025-09-17T08:51:35,372 copying goatools/test_data/genes_NCBI_7227_ProteinCoding.py -> build/lib/goatools/test_data 2025-09-17T08:51:35,489 creating build/lib/goatools/test_data/sections 2025-09-17T08:51:35,490 copying goatools/test_data/sections/__init__.py -> build/lib/goatools/test_data/sections 2025-09-17T08:51:35,492 copying goatools/test_data/sections/gjoneska_pfenning.py -> build/lib/goatools/test_data/sections 2025-09-17T08:51:35,494 copying goatools/test_data/sections/data2018_07_find_enrichment.py -> build/lib/goatools/test_data/sections 2025-09-17T08:51:35,496 copying goatools/test_data/sections/dvk2018_genefamilyclusters.py -> build/lib/goatools/test_data/sections 2025-09-17T08:51:35,499 creating build/lib/goatools/test_data/cli 2025-09-17T08:51:35,501 copying goatools/test_data/cli/find_enrichment_dflts.py -> build/lib/goatools/test_data/cli 2025-09-17T08:51:35,503 copying goatools/test_data/cli/__init__.py -> build/lib/goatools/test_data/cli 2025-09-17T08:51:35,505 creating build/lib/goatools/cli 2025-09-17T08:51:35,506 copying goatools/cli/grouped.py -> build/lib/goatools/cli 2025-09-17T08:51:35,508 copying goatools/cli/ncbi_gene_results_to_python.py -> build/lib/goatools/cli 2025-09-17T08:51:35,510 copying goatools/cli/__init__.py -> build/lib/goatools/cli 2025-09-17T08:51:35,512 copying goatools/cli/gos_get.py -> build/lib/goatools/cli 2025-09-17T08:51:35,514 copying goatools/cli/wr_sections.py -> build/lib/goatools/cli 2025-09-17T08:51:35,517 copying goatools/cli/compare_gos.py -> build/lib/goatools/cli 2025-09-17T08:51:35,519 copying goatools/cli/wr_hierarchy.py -> build/lib/goatools/cli 2025-09-17T08:51:35,522 copying goatools/cli/find_enrichment.py -> build/lib/goatools/cli 2025-09-17T08:51:35,524 copying goatools/cli/docopt_parse.py -> build/lib/goatools/cli 2025-09-17T08:51:35,526 copying goatools/cli/gosubdag_plot.py -> build/lib/goatools/cli 2025-09-17T08:51:35,529 copying goatools/cli/prt_terms.py -> build/lib/goatools/cli 2025-09-17T08:51:35,531 creating build/lib/goatools/rpt 2025-09-17T08:51:35,532 copying goatools/rpt/nts_xfrm.py -> build/lib/goatools/rpt 2025-09-17T08:51:35,534 copying goatools/rpt/__init__.py -> build/lib/goatools/rpt 2025-09-17T08:51:35,536 copying goatools/rpt/write_hierarchy_base.py -> build/lib/goatools/rpt 2025-09-17T08:51:35,538 copying goatools/rpt/prtfmt.py -> build/lib/goatools/rpt 2025-09-17T08:51:35,540 copying goatools/rpt/goea_nt_xfrm.py -> build/lib/goatools/rpt 2025-09-17T08:51:35,544 copying goatools/rpt/rpt_lev_depth.py -> build/lib/goatools/rpt 2025-09-17T08:51:35,547 creating build/lib/goatools/anno 2025-09-17T08:51:35,548 copying goatools/anno/genetogo_reader.py -> build/lib/goatools/anno 2025-09-17T08:51:35,551 copying goatools/anno/gpad_reader.py -> build/lib/goatools/anno 2025-09-17T08:51:35,554 copying goatools/anno/idtogos_reader.py -> build/lib/goatools/anno 2025-09-17T08:51:35,555 copying goatools/anno/__init__.py -> build/lib/goatools/anno 2025-09-17T08:51:35,557 copying goatools/anno/dnld_ebi_goa.py -> build/lib/goatools/anno 2025-09-17T08:51:35,559 copying goatools/anno/annoreader_base.py -> build/lib/goatools/anno 2025-09-17T08:51:35,562 copying goatools/anno/gaf_reader.py -> build/lib/goatools/anno 2025-09-17T08:51:35,565 copying goatools/anno/factory.py -> build/lib/goatools/anno 2025-09-17T08:51:35,567 copying goatools/anno/update_association.py -> build/lib/goatools/anno 2025-09-17T08:51:35,569 copying goatools/anno/broad_gos.py -> build/lib/goatools/anno 2025-09-17T08:51:35,572 copying goatools/anno/eco2group.py -> build/lib/goatools/anno 2025-09-17T08:51:35,575 copying goatools/anno/opts.py -> build/lib/goatools/anno 2025-09-17T08:51:35,578 creating build/lib/goatools/anno/init 2025-09-17T08:51:35,580 copying goatools/anno/init/reader_gpad.py -> build/lib/goatools/anno/init 2025-09-17T08:51:35,583 copying goatools/anno/init/__init__.py -> build/lib/goatools/anno/init 2025-09-17T08:51:35,585 copying goatools/anno/init/utils.py -> build/lib/goatools/anno/init 2025-09-17T08:51:35,587 copying goatools/anno/init/reader_idtogos.py -> build/lib/goatools/anno/init 2025-09-17T08:51:35,590 copying goatools/anno/init/reader_gaf.py -> build/lib/goatools/anno/init 2025-09-17T08:51:35,593 copying goatools/anno/init/reader_genetogo.py -> build/lib/goatools/anno/init 2025-09-17T08:51:35,596 creating build/lib/goatools/anno/extensions 2025-09-17T08:51:35,597 copying goatools/anno/extensions/__init__.py -> build/lib/goatools/anno/extensions 2025-09-17T08:51:35,600 copying goatools/anno/extensions/extension.py -> build/lib/goatools/anno/extensions 2025-09-17T08:51:35,602 copying goatools/anno/extensions/factory.py -> build/lib/goatools/anno/extensions 2025-09-17T08:51:35,604 copying goatools/anno/extensions/extensions.py -> build/lib/goatools/anno/extensions 2025-09-17T08:51:35,607 creating build/lib/goatools/goea 2025-09-17T08:51:35,608 copying goatools/goea/__init__.py -> build/lib/goatools/goea 2025-09-17T08:51:35,610 copying goatools/goea/go_enrichment_ns.py -> build/lib/goatools/goea 2025-09-17T08:51:35,613 creating build/lib/goatools/grouper 2025-09-17T08:51:35,615 copying goatools/grouper/grprobj.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,617 copying goatools/grouper/plotobj.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,620 copying goatools/grouper/sorter_gos.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,626 copying goatools/grouper/wrxlsx.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,630 copying goatools/grouper/read_goids.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,636 copying goatools/grouper/sorter.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,644 copying goatools/grouper/__init__.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,650 copying goatools/grouper/aart_geneproducts_all.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,655 copying goatools/grouper/grprobj_init.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,659 copying goatools/grouper/utils.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,661 copying goatools/grouper/grprdflts.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,664 copying goatools/grouper/wr_sections.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,667 copying goatools/grouper/hdrgos.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,669 copying goatools/grouper/aart_geneproducts_one.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,673 copying goatools/grouper/grprplt.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,678 copying goatools/grouper/sorter_nts.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,683 copying goatools/grouper/colors.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,686 copying goatools/grouper/tasks.py -> build/lib/goatools/grouper 2025-09-17T08:51:35,690 creating build/lib/goatools/parsers 2025-09-17T08:51:35,691 copying goatools/parsers/david_chart.py -> build/lib/goatools/parsers 2025-09-17T08:51:35,694 copying goatools/parsers/__init__.py -> build/lib/goatools/parsers 2025-09-17T08:51:35,696 copying goatools/parsers/ncbi_gene_file_reader.py -> build/lib/goatools/parsers 2025-09-17T08:51:35,699 creating build/lib/goatools/semsim 2025-09-17T08:51:35,700 copying goatools/semsim/__init__.py -> build/lib/goatools/semsim 2025-09-17T08:51:35,703 creating build/lib/goatools/semsim/termwise 2025-09-17T08:51:35,704 copying goatools/semsim/termwise/__init__.py -> build/lib/goatools/semsim/termwise 2025-09-17T08:51:35,707 copying goatools/semsim/termwise/wang.py -> build/lib/goatools/semsim/termwise 2025-09-17T08:51:35,709 copying goatools/semsim/termwise/dag_a.py -> build/lib/goatools/semsim/termwise 2025-09-17T08:51:35,711 running egg_info 2025-09-17T08:51:35,726 writing goatools.egg-info/PKG-INFO 2025-09-17T08:51:35,729 writing dependency_links to goatools.egg-info/dependency_links.txt 2025-09-17T08:51:35,731 writing requirements to goatools.egg-info/requires.txt 2025-09-17T08:51:35,732 writing top-level names to goatools.egg-info/top_level.txt 2025-09-17T08:51:35,786 listing git files failed - pretending there aren't any 2025-09-17T08:51:35,791 reading manifest file 'goatools.egg-info/SOURCES.txt' 2025-09-17T08:51:35,801 reading manifest template 'MANIFEST.in' 2025-09-17T08:51:35,803 warning: no previously-included files matching '*' found under directory '.github' 2025-09-17T08:51:35,804 warning: no previously-included files matching '*' found under directory 'data' 2025-09-17T08:51:35,805 warning: no previously-included files matching '*' found under directory 'doc' 2025-09-17T08:51:35,807 warning: no previously-included files matching '*' found under directory 'notebooks' 2025-09-17T08:51:35,808 warning: no previously-included files matching '*' found under directory 'sphinx' 2025-09-17T08:51:35,809 warning: no previously-included files matching '*' found under directory 'tests' 2025-09-17T08:51:35,810 warning: no previously-included files found matching '.*' 2025-09-17T08:51:35,811 adding license file 'LICENSE' 2025-09-17T08:51:35,820 writing manifest file 'goatools.egg-info/SOURCES.txt' 2025-09-17T08:51:35,825 /tmp/pip-build-env-ics145u9/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'goatools.test_data.nbt_3102' is absent from the `packages` configuration. 2025-09-17T08:51:35,825 !! 2025-09-17T08:51:35,826 ******************************************************************************** 2025-09-17T08:51:35,827 ############################ 2025-09-17T08:51:35,827 # Package would be ignored # 2025-09-17T08:51:35,828 ############################ 2025-09-17T08:51:35,828 Python recognizes 'goatools.test_data.nbt_3102' as an importable package[^1], 2025-09-17T08:51:35,829 but it is absent from setuptools' `packages` configuration. 2025-09-17T08:51:35,830 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-17T08:51:35,831 package, please make sure that 'goatools.test_data.nbt_3102' is explicitly added 2025-09-17T08:51:35,831 to the `packages` configuration field. 2025-09-17T08:51:35,832 Alternatively, you can also rely on setuptools' discovery methods 2025-09-17T08:51:35,833 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-17T08:51:35,833 instead of `find_packages(...)`/`find:`). 2025-09-17T08:51:35,834 You can read more about "package discovery" on setuptools documentation page: 2025-09-17T08:51:35,835 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-17T08:51:35,836 If you don't want 'goatools.test_data.nbt_3102' to be distributed and are 2025-09-17T08:51:35,836 already explicitly excluding 'goatools.test_data.nbt_3102' via 2025-09-17T08:51:35,836 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-17T08:51:35,837 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-17T08:51:35,837 combination with a more fine grained `package-data` configuration. 2025-09-17T08:51:35,838 You can read more about "package data files" on setuptools documentation page: 2025-09-17T08:51:35,839 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-17T08:51:35,840 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-17T08:51:35,841 even if it does not contain any `.py` files. 2025-09-17T08:51:35,841 On the other hand, currently there is no concept of package data 2025-09-17T08:51:35,841 directory, all directories are treated like packages. 2025-09-17T08:51:35,842 ******************************************************************************** 2025-09-17T08:51:35,843 !! 2025-09-17T08:51:35,843 check.warn(importable) 2025-09-17T08:51:35,848 copying goatools/.gitignore -> build/lib/goatools 2025-09-17T08:51:35,851 creating build/lib/goatools/test_data/nbt_3102 2025-09-17T08:51:35,852 copying goatools/test_data/nbt_3102/README.md -> build/lib/goatools/test_data/nbt_3102 2025-09-17T08:51:35,855 copying goatools/test_data/nbt_3102/__init__.py -> build/lib/goatools/test_data/nbt_3102 2025-09-17T08:51:35,857 copying goatools/test_data/nbt_3102/nbt.3102-S4.xlsx -> build/lib/goatools/test_data/nbt_3102 2025-09-17T08:51:35,861 copying goatools/test_data/nbt_3102/nbt.3102-S4_GeneIDs.xlsx -> build/lib/goatools/test_data/nbt_3102 2025-09-17T08:51:35,864 copying goatools/test_data/nbt_3102/nbt.3102-S6.xlsx -> build/lib/goatools/test_data/nbt_3102 2025-09-17T08:51:35,867 copying goatools/test_data/nbt_3102/nbt3102_GO_word_genes.txt -> build/lib/goatools/test_data/nbt_3102 2025-09-17T08:51:35,870 copying goatools/test_data/nbt_3102/symbol2geneid.py -> build/lib/goatools/test_data/nbt_3102 2025-09-17T08:51:35,883 running build_scripts 2025-09-17T08:51:35,884 creating build/scripts-3.11 2025-09-17T08:51:35,885 copying and adjusting scripts/wr_sections.py -> build/scripts-3.11 2025-09-17T08:51:35,887 copying and adjusting scripts/prt_terms.py -> build/scripts-3.11 2025-09-17T08:51:35,889 copying and adjusting scripts/go_plot.py -> build/scripts-3.11 2025-09-17T08:51:35,891 copying and adjusting scripts/compare_gos.py -> build/scripts-3.11 2025-09-17T08:51:35,893 copying and adjusting scripts/wr_hier.py -> build/scripts-3.11 2025-09-17T08:51:35,895 copying and adjusting scripts/map_to_slim.py -> build/scripts-3.11 2025-09-17T08:51:35,897 copying and adjusting scripts/ncbi_gene_results_to_python.py -> build/scripts-3.11 2025-09-17T08:51:35,899 copying and adjusting scripts/plot_go_term.py -> build/scripts-3.11 2025-09-17T08:51:35,901 copying scripts/fetch_associations.py -> build/scripts-3.11 2025-09-17T08:51:35,903 copying and adjusting scripts/find_enrichment.py -> build/scripts-3.11 2025-09-17T08:51:35,905 changing mode of build/scripts-3.11/wr_sections.py from 644 to 755 2025-09-17T08:51:35,906 changing mode of build/scripts-3.11/prt_terms.py from 644 to 755 2025-09-17T08:51:35,907 changing mode of build/scripts-3.11/go_plot.py from 644 to 755 2025-09-17T08:51:35,907 changing mode of build/scripts-3.11/compare_gos.py from 644 to 755 2025-09-17T08:51:35,908 changing mode of build/scripts-3.11/wr_hier.py from 644 to 755 2025-09-17T08:51:35,909 changing mode of build/scripts-3.11/map_to_slim.py from 644 to 755 2025-09-17T08:51:35,909 changing mode of build/scripts-3.11/ncbi_gene_results_to_python.py from 644 to 755 2025-09-17T08:51:35,910 changing mode of build/scripts-3.11/plot_go_term.py from 644 to 755 2025-09-17T08:51:35,911 changing mode of build/scripts-3.11/find_enrichment.py from 644 to 755 2025-09-17T08:51:35,929 installing to build/bdist.linux-armv7l/wheel 2025-09-17T08:51:35,930 running install 2025-09-17T08:51:35,955 running install_lib 2025-09-17T08:51:35,965 creating build/bdist.linux-armv7l/wheel 2025-09-17T08:51:35,968 creating build/bdist.linux-armv7l/wheel/goatools 2025-09-17T08:51:35,970 copying build/lib/goatools/wr_tbl_class.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:35,973 creating build/bdist.linux-armv7l/wheel/goatools/grouper 2025-09-17T08:51:35,974 copying build/lib/goatools/grouper/grprobj.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,977 copying build/lib/goatools/grouper/plotobj.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,980 copying build/lib/goatools/grouper/sorter_gos.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,982 copying build/lib/goatools/grouper/wrxlsx.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,984 copying build/lib/goatools/grouper/read_goids.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,987 copying build/lib/goatools/grouper/sorter.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,989 copying build/lib/goatools/grouper/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,991 copying build/lib/goatools/grouper/aart_geneproducts_all.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,994 copying build/lib/goatools/grouper/grprobj_init.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,996 copying build/lib/goatools/grouper/utils.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:35,998 copying build/lib/goatools/grouper/grprdflts.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:36,000 copying build/lib/goatools/grouper/wr_sections.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:36,003 copying build/lib/goatools/grouper/hdrgos.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:36,005 copying build/lib/goatools/grouper/aart_geneproducts_one.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:36,007 copying build/lib/goatools/grouper/grprplt.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:36,009 copying build/lib/goatools/grouper/sorter_nts.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:36,011 copying build/lib/goatools/grouper/colors.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:36,014 copying build/lib/goatools/grouper/tasks.py -> build/bdist.linux-armv7l/wheel/./goatools/grouper 2025-09-17T08:51:36,015 copying build/lib/goatools/godag_small.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,018 creating build/bdist.linux-armv7l/wheel/goatools/parsers 2025-09-17T08:51:36,019 copying build/lib/goatools/parsers/david_chart.py -> build/bdist.linux-armv7l/wheel/./goatools/parsers 2025-09-17T08:51:36,021 copying build/lib/goatools/parsers/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/parsers 2025-09-17T08:51:36,023 copying build/lib/goatools/parsers/ncbi_gene_file_reader.py -> build/bdist.linux-armv7l/wheel/./goatools/parsers 2025-09-17T08:51:36,025 copying build/lib/goatools/multiple_testing.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,028 creating build/bdist.linux-armv7l/wheel/goatools/rpt 2025-09-17T08:51:36,029 copying build/lib/goatools/rpt/nts_xfrm.py -> build/bdist.linux-armv7l/wheel/./goatools/rpt 2025-09-17T08:51:36,031 copying build/lib/goatools/rpt/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/rpt 2025-09-17T08:51:36,033 copying build/lib/goatools/rpt/write_hierarchy_base.py -> build/bdist.linux-armv7l/wheel/./goatools/rpt 2025-09-17T08:51:36,034 copying build/lib/goatools/rpt/prtfmt.py -> build/bdist.linux-armv7l/wheel/./goatools/rpt 2025-09-17T08:51:36,036 copying build/lib/goatools/rpt/goea_nt_xfrm.py -> build/bdist.linux-armv7l/wheel/./goatools/rpt 2025-09-17T08:51:36,038 copying build/lib/goatools/rpt/rpt_lev_depth.py -> build/bdist.linux-armv7l/wheel/./goatools/rpt 2025-09-17T08:51:36,040 copying build/lib/goatools/wr_tbl.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,043 copying build/lib/goatools/version.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,045 creating build/bdist.linux-armv7l/wheel/goatools/goea 2025-09-17T08:51:36,046 copying build/lib/goatools/goea/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/goea 2025-09-17T08:51:36,047 copying build/lib/goatools/goea/go_enrichment_ns.py -> build/bdist.linux-armv7l/wheel/./goatools/goea 2025-09-17T08:51:36,049 copying build/lib/goatools/statsdescribe.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,051 copying build/lib/goatools/go_enrichment.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,054 creating build/bdist.linux-armv7l/wheel/goatools/semsim 2025-09-17T08:51:36,055 copying build/lib/goatools/semsim/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/semsim 2025-09-17T08:51:36,058 creating build/bdist.linux-armv7l/wheel/goatools/semsim/termwise 2025-09-17T08:51:36,059 copying build/lib/goatools/semsim/termwise/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/semsim/termwise 2025-09-17T08:51:36,061 copying build/lib/goatools/semsim/termwise/wang.py -> build/bdist.linux-armv7l/wheel/./goatools/semsim/termwise 2025-09-17T08:51:36,063 copying build/lib/goatools/semsim/termwise/dag_a.py -> build/bdist.linux-armv7l/wheel/./goatools/semsim/termwise 2025-09-17T08:51:36,066 copying build/lib/goatools/go_search.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,068 copying build/lib/goatools/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,070 copying build/lib/goatools/ratio.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,072 copying build/lib/goatools/obo_parser.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,075 copying build/lib/goatools/utils.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,078 copying build/lib/goatools/randseed.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:36,080 creating build/bdist.linux-armv7l/wheel/goatools/test_data 2025-09-17T08:51:36,082 copying build/lib/goatools/test_data/gjoneska_2015_ensmusg2symbol.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,095 copying build/lib/goatools/test_data/gjoneska_goea_late_decrease.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,200 copying build/lib/goatools/test_data/gjoneska_goea_late_increase.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,328 copying build/lib/goatools/test_data/godag_timed.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,330 copying build/lib/goatools/test_data/gjoneska_goea_consistent_decrease.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,477 copying build/lib/goatools/test_data/genes_NCBI_9606_ProteinCoding.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,652 creating build/bdist.linux-armv7l/wheel/goatools/test_data/sections 2025-09-17T08:51:36,653 copying build/lib/goatools/test_data/sections/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data/sections 2025-09-17T08:51:36,654 copying build/lib/goatools/test_data/sections/gjoneska_pfenning.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data/sections 2025-09-17T08:51:36,657 copying build/lib/goatools/test_data/sections/data2018_07_find_enrichment.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data/sections 2025-09-17T08:51:36,659 copying build/lib/goatools/test_data/sections/dvk2018_genefamilyclusters.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data/sections 2025-09-17T08:51:36,662 copying build/lib/goatools/test_data/sorter.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,664 copying build/lib/goatools/test_data/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,667 creating build/bdist.linux-armv7l/wheel/goatools/test_data/nbt_3102 2025-09-17T08:51:36,669 copying build/lib/goatools/test_data/nbt_3102/symbol2geneid.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data/nbt_3102 2025-09-17T08:51:36,672 copying build/lib/goatools/test_data/nbt_3102/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data/nbt_3102 2025-09-17T08:51:36,674 copying build/lib/goatools/test_data/nbt_3102/nbt.3102-S6.xlsx -> build/bdist.linux-armv7l/wheel/./goatools/test_data/nbt_3102 2025-09-17T08:51:36,677 copying build/lib/goatools/test_data/nbt_3102/README.md -> build/bdist.linux-armv7l/wheel/./goatools/test_data/nbt_3102 2025-09-17T08:51:36,679 copying build/lib/goatools/test_data/nbt_3102/nbt.3102-S4_GeneIDs.xlsx -> build/bdist.linux-armv7l/wheel/./goatools/test_data/nbt_3102 2025-09-17T08:51:36,682 copying build/lib/goatools/test_data/nbt_3102/nbt.3102-S4.xlsx -> build/bdist.linux-armv7l/wheel/./goatools/test_data/nbt_3102 2025-09-17T08:51:36,685 copying build/lib/goatools/test_data/nbt_3102/nbt3102_GO_word_genes.txt -> build/bdist.linux-armv7l/wheel/./goatools/test_data/nbt_3102 2025-09-17T08:51:36,688 copying build/lib/goatools/test_data/gjoneska_goea_transient_decrease.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,782 copying build/lib/goatools/test_data/genes_NCBI_10090_All.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:36,944 creating build/bdist.linux-armv7l/wheel/goatools/test_data/cli 2025-09-17T08:51:36,945 copying build/lib/goatools/test_data/cli/find_enrichment_dflts.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data/cli 2025-09-17T08:51:36,947 copying build/lib/goatools/test_data/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data/cli 2025-09-17T08:51:36,948 copying build/lib/goatools/test_data/genes_NCBI_10090_ProteinCoding.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:37,182 copying build/lib/goatools/test_data/gjoneska_goea_consistent_increase.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:37,273 copying build/lib/goatools/test_data/wr_subobo.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:37,275 copying build/lib/goatools/test_data/nature3102_goea.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:37,278 copying build/lib/goatools/test_data/gjoneska_goea_transient_increase.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:37,354 copying build/lib/goatools/test_data/gafs.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:37,356 copying build/lib/goatools/test_data/genes_NCBI_9606_All.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:38,141 copying build/lib/goatools/test_data/checks.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:38,143 copying build/lib/goatools/test_data/genes_NCBI_7227_ProteinCoding.py -> build/bdist.linux-armv7l/wheel/./goatools/test_data 2025-09-17T08:51:38,261 copying build/lib/goatools/mapslim.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,264 creating build/bdist.linux-armv7l/wheel/goatools/godag 2025-09-17T08:51:38,265 copying build/lib/goatools/godag/go_tasks.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,268 copying build/lib/goatools/godag/relationship_combos.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,270 copying build/lib/goatools/godag/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,271 copying build/lib/goatools/godag/reldepth.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,273 copying build/lib/goatools/godag/prttime.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,275 copying build/lib/goatools/godag/consts.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,277 copying build/lib/goatools/godag/obo_optional_attributes.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,279 copying build/lib/goatools/godag/relationship_str.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,281 copying build/lib/goatools/godag/typedef.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,283 copying build/lib/goatools/godag/prtfncs.py -> build/bdist.linux-armv7l/wheel/./goatools/godag 2025-09-17T08:51:38,284 copying build/lib/goatools/base.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,287 creating build/bdist.linux-armv7l/wheel/goatools/anno 2025-09-17T08:51:38,288 copying build/lib/goatools/anno/genetogo_reader.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,290 copying build/lib/goatools/anno/gpad_reader.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,292 copying build/lib/goatools/anno/idtogos_reader.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,294 copying build/lib/goatools/anno/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,296 creating build/bdist.linux-armv7l/wheel/goatools/anno/extensions 2025-09-17T08:51:38,297 copying build/lib/goatools/anno/extensions/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/extensions 2025-09-17T08:51:38,299 copying build/lib/goatools/anno/extensions/extension.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/extensions 2025-09-17T08:51:38,301 copying build/lib/goatools/anno/extensions/factory.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/extensions 2025-09-17T08:51:38,302 copying build/lib/goatools/anno/extensions/extensions.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/extensions 2025-09-17T08:51:38,304 copying build/lib/goatools/anno/dnld_ebi_goa.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,306 copying build/lib/goatools/anno/annoreader_base.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,308 copying build/lib/goatools/anno/gaf_reader.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,310 copying build/lib/goatools/anno/factory.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,312 copying build/lib/goatools/anno/update_association.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,315 creating build/bdist.linux-armv7l/wheel/goatools/anno/init 2025-09-17T08:51:38,316 copying build/lib/goatools/anno/init/reader_gpad.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/init 2025-09-17T08:51:38,318 copying build/lib/goatools/anno/init/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/init 2025-09-17T08:51:38,320 copying build/lib/goatools/anno/init/utils.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/init 2025-09-17T08:51:38,322 copying build/lib/goatools/anno/init/reader_idtogos.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/init 2025-09-17T08:51:38,325 copying build/lib/goatools/anno/init/reader_gaf.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/init 2025-09-17T08:51:38,327 copying build/lib/goatools/anno/init/reader_genetogo.py -> build/bdist.linux-armv7l/wheel/./goatools/anno/init 2025-09-17T08:51:38,330 copying build/lib/goatools/anno/broad_gos.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,332 copying build/lib/goatools/anno/eco2group.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,335 copying build/lib/goatools/anno/opts.py -> build/bdist.linux-armv7l/wheel/./goatools/anno 2025-09-17T08:51:38,337 copying build/lib/goatools/godag_obosm.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,339 creating build/bdist.linux-armv7l/wheel/goatools/cli 2025-09-17T08:51:38,340 copying build/lib/goatools/cli/grouped.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,342 copying build/lib/goatools/cli/ncbi_gene_results_to_python.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,344 copying build/lib/goatools/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,345 copying build/lib/goatools/cli/gos_get.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,347 copying build/lib/goatools/cli/wr_sections.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,349 copying build/lib/goatools/cli/compare_gos.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,352 copying build/lib/goatools/cli/wr_hierarchy.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,354 copying build/lib/goatools/cli/find_enrichment.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,356 copying build/lib/goatools/cli/docopt_parse.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,358 copying build/lib/goatools/cli/gosubdag_plot.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,360 copying build/lib/goatools/cli/prt_terms.py -> build/bdist.linux-armv7l/wheel/./goatools/cli 2025-09-17T08:51:38,362 copying build/lib/goatools/evidence_codes.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,364 copying build/lib/goatools/godag_plot.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,367 creating build/bdist.linux-armv7l/wheel/goatools/gosubdag 2025-09-17T08:51:38,368 copying build/lib/goatools/gosubdag/godag_rcnt.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,370 creating build/bdist.linux-armv7l/wheel/goatools/gosubdag/rpt 2025-09-17T08:51:38,371 copying build/lib/goatools/gosubdag/rpt/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/rpt 2025-09-17T08:51:38,373 copying build/lib/goatools/gosubdag/rpt/wr_xlsx.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/rpt 2025-09-17T08:51:38,375 copying build/lib/goatools/gosubdag/rpt/write_hierarchy.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/rpt 2025-09-17T08:51:38,377 copying build/lib/goatools/gosubdag/go_most_specific.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,379 copying build/lib/goatools/gosubdag/go_tasks.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,381 copying build/lib/goatools/gosubdag/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,383 copying build/lib/goatools/gosubdag/utils.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,385 copying build/lib/goatools/gosubdag/gosubdag.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,387 copying build/lib/goatools/gosubdag/godag_rcnt_init.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,389 copying build/lib/goatools/gosubdag/go_edges.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,391 copying build/lib/goatools/gosubdag/gosubdag_init.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,394 creating build/bdist.linux-armv7l/wheel/goatools/gosubdag/plot 2025-09-17T08:51:38,395 copying build/lib/goatools/gosubdag/plot/goea_results.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/plot 2025-09-17T08:51:38,397 copying build/lib/goatools/gosubdag/plot/go_node.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/plot 2025-09-17T08:51:38,400 copying build/lib/goatools/gosubdag/plot/plot.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/plot 2025-09-17T08:51:38,401 copying build/lib/goatools/gosubdag/plot/__init__.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/plot 2025-09-17T08:51:38,403 copying build/lib/goatools/gosubdag/plot/go_edge.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/plot 2025-09-17T08:51:38,405 copying build/lib/goatools/gosubdag/plot/go2color.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/plot 2025-09-17T08:51:38,407 copying build/lib/goatools/gosubdag/plot/go_name_shorten.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/plot 2025-09-17T08:51:38,409 copying build/lib/goatools/gosubdag/plot/gosubdag_plot.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag/plot 2025-09-17T08:51:38,411 copying build/lib/goatools/gosubdag/go_paths.py -> build/bdist.linux-armv7l/wheel/./goatools/gosubdag 2025-09-17T08:51:38,413 copying build/lib/goatools/pvalcalc.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,415 copying build/lib/goatools/semantic.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,417 copying build/lib/goatools/nt_utils.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,419 copying build/lib/goatools/obo_tasks.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,420 copying build/lib/goatools/associations.py -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,422 copying build/lib/goatools/.gitignore -> build/bdist.linux-armv7l/wheel/./goatools 2025-09-17T08:51:38,424 running install_egg_info 2025-09-17T08:51:38,436 Copying goatools.egg-info to build/bdist.linux-armv7l/wheel/./goatools-1.5.2-py3.11.egg-info 2025-09-17T08:51:38,446 running install_scripts 2025-09-17T08:51:38,447 creating build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,448 copying build/scripts-3.11/ncbi_gene_results_to_python.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,450 copying build/scripts-3.11/wr_hier.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,452 copying build/scripts-3.11/map_to_slim.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,453 copying build/scripts-3.11/wr_sections.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,455 copying build/scripts-3.11/fetch_associations.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,457 copying build/scripts-3.11/compare_gos.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,459 copying build/scripts-3.11/find_enrichment.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,461 copying build/scripts-3.11/plot_go_term.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,463 copying build/scripts-3.11/prt_terms.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,464 copying build/scripts-3.11/go_plot.py -> build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts 2025-09-17T08:51:38,466 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/ncbi_gene_results_to_python.py to 755 2025-09-17T08:51:38,467 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/wr_hier.py to 755 2025-09-17T08:51:38,467 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/map_to_slim.py to 755 2025-09-17T08:51:38,468 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/wr_sections.py to 755 2025-09-17T08:51:38,468 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/fetch_associations.py to 755 2025-09-17T08:51:38,469 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/compare_gos.py to 755 2025-09-17T08:51:38,470 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/find_enrichment.py to 755 2025-09-17T08:51:38,470 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/plot_go_term.py to 755 2025-09-17T08:51:38,471 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/prt_terms.py to 755 2025-09-17T08:51:38,471 changing mode of build/bdist.linux-armv7l/wheel/goatools-1.5.2.data/scripts/go_plot.py to 755 2025-09-17T08:51:38,480 creating build/bdist.linux-armv7l/wheel/goatools-1.5.2.dist-info/WHEEL 2025-09-17T08:51:38,482 creating '/tmp/pip-wheel-c_rleo4x/.tmp-012bpo72/goatools-1.5.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-17T08:51:38,485 adding 'goatools/.gitignore' 2025-09-17T08:51:38,486 adding 'goatools/__init__.py' 2025-09-17T08:51:38,488 adding 'goatools/associations.py' 2025-09-17T08:51:38,490 adding 'goatools/base.py' 2025-09-17T08:51:38,492 adding 'goatools/evidence_codes.py' 2025-09-17T08:51:38,495 adding 'goatools/go_enrichment.py' 2025-09-17T08:51:38,497 adding 'goatools/go_search.py' 2025-09-17T08:51:38,499 adding 'goatools/godag_obosm.py' 2025-09-17T08:51:38,500 adding 'goatools/godag_plot.py' 2025-09-17T08:51:38,502 adding 'goatools/godag_small.py' 2025-09-17T08:51:38,503 adding 'goatools/mapslim.py' 2025-09-17T08:51:38,505 adding 'goatools/multiple_testing.py' 2025-09-17T08:51:38,506 adding 'goatools/nt_utils.py' 2025-09-17T08:51:38,509 adding 'goatools/obo_parser.py' 2025-09-17T08:51:38,510 adding 'goatools/obo_tasks.py' 2025-09-17T08:51:38,512 adding 'goatools/pvalcalc.py' 2025-09-17T08:51:38,513 adding 'goatools/randseed.py' 2025-09-17T08:51:38,514 adding 'goatools/ratio.py' 2025-09-17T08:51:38,516 adding 'goatools/semantic.py' 2025-09-17T08:51:38,517 adding 'goatools/statsdescribe.py' 2025-09-17T08:51:38,519 adding 'goatools/utils.py' 2025-09-17T08:51:38,520 adding 'goatools/version.py' 2025-09-17T08:51:38,522 adding 'goatools/wr_tbl.py' 2025-09-17T08:51:38,524 adding 'goatools/wr_tbl_class.py' 2025-09-17T08:51:38,526 adding 'goatools/anno/__init__.py' 2025-09-17T08:51:38,528 adding 'goatools/anno/annoreader_base.py' 2025-09-17T08:51:38,530 adding 'goatools/anno/broad_gos.py' 2025-09-17T08:51:38,532 adding 'goatools/anno/dnld_ebi_goa.py' 2025-09-17T08:51:38,535 adding 'goatools/anno/eco2group.py' 2025-09-17T08:51:38,536 adding 'goatools/anno/factory.py' 2025-09-17T08:51:38,538 adding 'goatools/anno/gaf_reader.py' 2025-09-17T08:51:38,539 adding 'goatools/anno/genetogo_reader.py' 2025-09-17T08:51:38,541 adding 'goatools/anno/gpad_reader.py' 2025-09-17T08:51:38,542 adding 'goatools/anno/idtogos_reader.py' 2025-09-17T08:51:38,544 adding 'goatools/anno/opts.py' 2025-09-17T08:51:38,545 adding 'goatools/anno/update_association.py' 2025-09-17T08:51:38,547 adding 'goatools/anno/extensions/__init__.py' 2025-09-17T08:51:38,548 adding 'goatools/anno/extensions/extension.py' 2025-09-17T08:51:38,549 adding 'goatools/anno/extensions/extensions.py' 2025-09-17T08:51:38,551 adding 'goatools/anno/extensions/factory.py' 2025-09-17T08:51:38,552 adding 'goatools/anno/init/__init__.py' 2025-09-17T08:51:38,555 adding 'goatools/anno/init/reader_gaf.py' 2025-09-17T08:51:38,557 adding 'goatools/anno/init/reader_genetogo.py' 2025-09-17T08:51:38,559 adding 'goatools/anno/init/reader_gpad.py' 2025-09-17T08:51:38,560 adding 'goatools/anno/init/reader_idtogos.py' 2025-09-17T08:51:38,561 adding 'goatools/anno/init/utils.py' 2025-09-17T08:51:38,563 adding 'goatools/cli/__init__.py' 2025-09-17T08:51:38,565 adding 'goatools/cli/compare_gos.py' 2025-09-17T08:51:38,567 adding 'goatools/cli/docopt_parse.py' 2025-09-17T08:51:38,570 adding 'goatools/cli/find_enrichment.py' 2025-09-17T08:51:38,572 adding 'goatools/cli/gos_get.py' 2025-09-17T08:51:38,575 adding 'goatools/cli/gosubdag_plot.py' 2025-09-17T08:51:38,576 adding 'goatools/cli/grouped.py' 2025-09-17T08:51:38,578 adding 'goatools/cli/ncbi_gene_results_to_python.py' 2025-09-17T08:51:38,579 adding 'goatools/cli/prt_terms.py' 2025-09-17T08:51:38,581 adding 'goatools/cli/wr_hierarchy.py' 2025-09-17T08:51:38,582 adding 'goatools/cli/wr_sections.py' 2025-09-17T08:51:38,584 adding 'goatools/godag/__init__.py' 2025-09-17T08:51:38,585 adding 'goatools/godag/consts.py' 2025-09-17T08:51:38,587 adding 'goatools/godag/go_tasks.py' 2025-09-17T08:51:38,588 adding 'goatools/godag/obo_optional_attributes.py' 2025-09-17T08:51:38,590 adding 'goatools/godag/prtfncs.py' 2025-09-17T08:51:38,591 adding 'goatools/godag/prttime.py' 2025-09-17T08:51:38,592 adding 'goatools/godag/relationship_combos.py' 2025-09-17T08:51:38,594 adding 'goatools/godag/relationship_str.py' 2025-09-17T08:51:38,595 adding 'goatools/godag/reldepth.py' 2025-09-17T08:51:38,596 adding 'goatools/godag/typedef.py' 2025-09-17T08:51:38,598 adding 'goatools/goea/__init__.py' 2025-09-17T08:51:38,599 adding 'goatools/goea/go_enrichment_ns.py' 2025-09-17T08:51:38,601 adding 'goatools/gosubdag/__init__.py' 2025-09-17T08:51:38,603 adding 'goatools/gosubdag/go_edges.py' 2025-09-17T08:51:38,604 adding 'goatools/gosubdag/go_most_specific.py' 2025-09-17T08:51:38,605 adding 'goatools/gosubdag/go_paths.py' 2025-09-17T08:51:38,607 adding 'goatools/gosubdag/go_tasks.py' 2025-09-17T08:51:38,608 adding 'goatools/gosubdag/godag_rcnt.py' 2025-09-17T08:51:38,610 adding 'goatools/gosubdag/godag_rcnt_init.py' 2025-09-17T08:51:38,611 adding 'goatools/gosubdag/gosubdag.py' 2025-09-17T08:51:38,613 adding 'goatools/gosubdag/gosubdag_init.py' 2025-09-17T08:51:38,614 adding 'goatools/gosubdag/utils.py' 2025-09-17T08:51:38,616 adding 'goatools/gosubdag/plot/__init__.py' 2025-09-17T08:51:38,618 adding 'goatools/gosubdag/plot/go2color.py' 2025-09-17T08:51:38,619 adding 'goatools/gosubdag/plot/go_edge.py' 2025-09-17T08:51:38,621 adding 'goatools/gosubdag/plot/go_name_shorten.py' 2025-09-17T08:51:38,622 adding 'goatools/gosubdag/plot/go_node.py' 2025-09-17T08:51:38,624 adding 'goatools/gosubdag/plot/goea_results.py' 2025-09-17T08:51:38,626 adding 'goatools/gosubdag/plot/gosubdag_plot.py' 2025-09-17T08:51:38,627 adding 'goatools/gosubdag/plot/plot.py' 2025-09-17T08:51:38,629 adding 'goatools/gosubdag/rpt/__init__.py' 2025-09-17T08:51:38,631 adding 'goatools/gosubdag/rpt/wr_xlsx.py' 2025-09-17T08:51:38,633 adding 'goatools/gosubdag/rpt/write_hierarchy.py' 2025-09-17T08:51:38,634 adding 'goatools/grouper/__init__.py' 2025-09-17T08:51:38,636 adding 'goatools/grouper/aart_geneproducts_all.py' 2025-09-17T08:51:38,638 adding 'goatools/grouper/aart_geneproducts_one.py' 2025-09-17T08:51:38,639 adding 'goatools/grouper/colors.py' 2025-09-17T08:51:38,641 adding 'goatools/grouper/grprdflts.py' 2025-09-17T08:51:38,643 adding 'goatools/grouper/grprobj.py' 2025-09-17T08:51:38,645 adding 'goatools/grouper/grprobj_init.py' 2025-09-17T08:51:38,646 adding 'goatools/grouper/grprplt.py' 2025-09-17T08:51:38,648 adding 'goatools/grouper/hdrgos.py' 2025-09-17T08:51:38,650 adding 'goatools/grouper/plotobj.py' 2025-09-17T08:51:38,652 adding 'goatools/grouper/read_goids.py' 2025-09-17T08:51:38,653 adding 'goatools/grouper/sorter.py' 2025-09-17T08:51:38,655 adding 'goatools/grouper/sorter_gos.py' 2025-09-17T08:51:38,656 adding 'goatools/grouper/sorter_nts.py' 2025-09-17T08:51:38,658 adding 'goatools/grouper/tasks.py' 2025-09-17T08:51:38,659 adding 'goatools/grouper/utils.py' 2025-09-17T08:51:38,660 adding 'goatools/grouper/wr_sections.py' 2025-09-17T08:51:38,662 adding 'goatools/grouper/wrxlsx.py' 2025-09-17T08:51:38,664 adding 'goatools/parsers/__init__.py' 2025-09-17T08:51:38,665 adding 'goatools/parsers/david_chart.py' 2025-09-17T08:51:38,667 adding 'goatools/parsers/ncbi_gene_file_reader.py' 2025-09-17T08:51:38,669 adding 'goatools/rpt/__init__.py' 2025-09-17T08:51:38,671 adding 'goatools/rpt/goea_nt_xfrm.py' 2025-09-17T08:51:38,672 adding 'goatools/rpt/nts_xfrm.py' 2025-09-17T08:51:38,673 adding 'goatools/rpt/prtfmt.py' 2025-09-17T08:51:38,675 adding 'goatools/rpt/rpt_lev_depth.py' 2025-09-17T08:51:38,676 adding 'goatools/rpt/write_hierarchy_base.py' 2025-09-17T08:51:38,678 adding 'goatools/semsim/__init__.py' 2025-09-17T08:51:38,679 adding 'goatools/semsim/termwise/__init__.py' 2025-09-17T08:51:38,681 adding 'goatools/semsim/termwise/dag_a.py' 2025-09-17T08:51:38,682 adding 'goatools/semsim/termwise/wang.py' 2025-09-17T08:51:38,684 adding 'goatools/test_data/__init__.py' 2025-09-17T08:51:38,685 adding 'goatools/test_data/checks.py' 2025-09-17T08:51:38,686 adding 'goatools/test_data/gafs.py' 2025-09-17T08:51:39,454 adding 'goatools/test_data/genes_NCBI_10090_All.py' 2025-09-17T08:51:40,600 adding 'goatools/test_data/genes_NCBI_10090_ProteinCoding.py' 2025-09-17T08:51:41,256 adding 'goatools/test_data/genes_NCBI_7227_ProteinCoding.py' 2025-09-17T08:51:43,050 adding 'goatools/test_data/genes_NCBI_9606_All.py' 2025-09-17T08:51:44,078 adding 'goatools/test_data/genes_NCBI_9606_ProteinCoding.py' 2025-09-17T08:51:44,201 adding 'goatools/test_data/gjoneska_2015_ensmusg2symbol.py' 2025-09-17T08:51:44,569 adding 'goatools/test_data/gjoneska_goea_consistent_decrease.py' 2025-09-17T08:51:44,963 adding 'goatools/test_data/gjoneska_goea_consistent_increase.py' 2025-09-17T08:51:45,385 adding 'goatools/test_data/gjoneska_goea_late_decrease.py' 2025-09-17T08:51:45,863 adding 'goatools/test_data/gjoneska_goea_late_increase.py' 2025-09-17T08:51:46,122 adding 'goatools/test_data/gjoneska_goea_transient_decrease.py' 2025-09-17T08:51:46,443 adding 'goatools/test_data/gjoneska_goea_transient_increase.py' 2025-09-17T08:51:46,475 adding 'goatools/test_data/godag_timed.py' 2025-09-17T08:51:46,477 adding 'goatools/test_data/nature3102_goea.py' 2025-09-17T08:51:46,479 adding 'goatools/test_data/sorter.py' 2025-09-17T08:51:46,480 adding 'goatools/test_data/wr_subobo.py' 2025-09-17T08:51:46,482 adding 'goatools/test_data/cli/__init__.py' 2025-09-17T08:51:46,483 adding 'goatools/test_data/cli/find_enrichment_dflts.py' 2025-09-17T08:51:46,485 adding 'goatools/test_data/nbt_3102/README.md' 2025-09-17T08:51:46,486 adding 'goatools/test_data/nbt_3102/__init__.py' 2025-09-17T08:51:46,491 adding 'goatools/test_data/nbt_3102/nbt.3102-S4.xlsx' 2025-09-17T08:51:46,494 adding 'goatools/test_data/nbt_3102/nbt.3102-S4_GeneIDs.xlsx' 2025-09-17T08:51:46,498 adding 'goatools/test_data/nbt_3102/nbt.3102-S6.xlsx' 2025-09-17T08:51:46,500 adding 'goatools/test_data/nbt_3102/nbt3102_GO_word_genes.txt' 2025-09-17T08:51:46,502 adding 'goatools/test_data/nbt_3102/symbol2geneid.py' 2025-09-17T08:51:46,504 adding 'goatools/test_data/sections/__init__.py' 2025-09-17T08:51:46,506 adding 'goatools/test_data/sections/data2018_07_find_enrichment.py' 2025-09-17T08:51:46,509 adding 'goatools/test_data/sections/dvk2018_genefamilyclusters.py' 2025-09-17T08:51:46,511 adding 'goatools/test_data/sections/gjoneska_pfenning.py' 2025-09-17T08:51:46,513 adding 'goatools-1.5.2.data/scripts/compare_gos.py' 2025-09-17T08:51:46,514 adding 'goatools-1.5.2.data/scripts/fetch_associations.py' 2025-09-17T08:51:46,516 adding 'goatools-1.5.2.data/scripts/find_enrichment.py' 2025-09-17T08:51:46,517 adding 'goatools-1.5.2.data/scripts/go_plot.py' 2025-09-17T08:51:46,518 adding 'goatools-1.5.2.data/scripts/map_to_slim.py' 2025-09-17T08:51:46,520 adding 'goatools-1.5.2.data/scripts/ncbi_gene_results_to_python.py' 2025-09-17T08:51:46,521 adding 'goatools-1.5.2.data/scripts/plot_go_term.py' 2025-09-17T08:51:46,522 adding 'goatools-1.5.2.data/scripts/prt_terms.py' 2025-09-17T08:51:46,523 adding 'goatools-1.5.2.data/scripts/wr_hier.py' 2025-09-17T08:51:46,525 adding 'goatools-1.5.2.data/scripts/wr_sections.py' 2025-09-17T08:51:46,527 adding 'goatools-1.5.2.dist-info/licenses/LICENSE' 2025-09-17T08:51:46,529 adding 'goatools-1.5.2.dist-info/METADATA' 2025-09-17T08:51:46,530 adding 'goatools-1.5.2.dist-info/WHEEL' 2025-09-17T08:51:46,531 adding 'goatools-1.5.2.dist-info/top_level.txt' 2025-09-17T08:51:46,534 adding 'goatools-1.5.2.dist-info/RECORD' 2025-09-17T08:51:46,702 removing build/bdist.linux-armv7l/wheel 2025-09-17T08:51:46,989 Building wheel for goatools (pyproject.toml): finished with status 'done' 2025-09-17T08:51:47,316 Created wheel for goatools: filename=goatools-1.5.2-py3-none-any.whl size=15764780 sha256=b089e8091842d5e4225c3dae2874d138b69633746178b4d016a834feaaa6271a 2025-09-17T08:51:47,317 Stored in directory: /tmp/pip-ephem-wheel-cache-wq6qagje/wheels/6a/6f/73/fc65fd474e5943eacaa5141b628d657d09e38a4095de513527 2025-09-17T08:51:47,339 Successfully built goatools 2025-09-17T08:51:47,799 Removed build tracker: '/tmp/pip-build-tracker-l96u04f9'