2025-09-17T10:29:11,600 Created temporary directory: /tmp/pip-ephem-wheel-cache-e99jam7j 2025-09-17T10:29:11,602 Created temporary directory: /tmp/pip-req-tracker-7z55qdap 2025-09-17T10:29:11,602 Initialized build tracking at /tmp/pip-req-tracker-7z55qdap 2025-09-17T10:29:11,602 Created build tracker: /tmp/pip-req-tracker-7z55qdap 2025-09-17T10:29:11,603 Entered build tracker: /tmp/pip-req-tracker-7z55qdap 2025-09-17T10:29:11,603 Created temporary directory: /tmp/pip-wheel-qzw2jooe 2025-09-17T10:29:11,623 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple, https://www.piwheels.org/simple 2025-09-17T10:29:11,625 2 location(s) to search for versions of cellmaps-coembedding: 2025-09-17T10:29:11,625 * https://pypi.org/simple/cellmaps-coembedding/ 2025-09-17T10:29:11,625 * https://www.piwheels.org/simple/cellmaps-coembedding/ 2025-09-17T10:29:11,625 Fetching project page and analyzing links: https://pypi.org/simple/cellmaps-coembedding/ 2025-09-17T10:29:11,626 Getting page https://pypi.org/simple/cellmaps-coembedding/ 2025-09-17T10:29:11,627 Found index url https://pypi.org/simple 2025-09-17T10:29:11,631 Starting new HTTPS connection (1): pypi.org:443 2025-09-17T10:29:11,748 https://pypi.org:443 "GET /simple/cellmaps-coembedding/ HTTP/1.1" 200 8781 2025-09-17T10:29:11,861 Skipping link: No binaries permitted for cellmaps-coembedding: https://files.pythonhosted.org/packages/5d/69/811a5097966c44debd6b82e9ece13ff5b7b742ead2359144377d569dfee3/cellmaps_coembedding-0.1.0a1-py2.py3-none-any.whl#sha256=3cdfe6f5532aafb7cd965a151af95b3ddd5ba98db509727631c12f175f991f18 (from https://pypi.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,861 Found link https://files.pythonhosted.org/packages/7a/55/b3214299347e127663bfb7972feafb57aa9ee4c28cd3587380e43e59c5db/cellmaps_coembedding-0.1.0a1.tar.gz#sha256=0f2ef60c79d5d7ff220d76dcb50cfdefd6553c2fbb9e92794402f5b27afbbd10 (from https://pypi.org/simple/cellmaps-coembedding/), version: 0.1.0a1 2025-09-17T10:29:11,862 Skipping link: No binaries permitted for cellmaps-coembedding: https://files.pythonhosted.org/packages/b1/d2/60b0dd7c3b018c83aada1665abdb25f9493caa86f4f20f37cb3e036a3845/cellmaps_coembedding-0.1.0a2-py2.py3-none-any.whl#sha256=49375e7250037f1f99e24004bf42391510f63464ef2dacb02ac72a4981f63aea (from https://pypi.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,862 Found link https://files.pythonhosted.org/packages/c7/b1/79fdf2d1310a4978592ae9d6e73bdc15e02e97c5eb2e61d384fbfe90b72c/cellmaps_coembedding-0.1.0a2.tar.gz#sha256=5e93d1981da057da4d9f63e85dcb47bb2ecbca2a3df74dab46a9121e06df3317 (from https://pypi.org/simple/cellmaps-coembedding/), version: 0.1.0a2 2025-09-17T10:29:11,862 Skipping link: No binaries permitted for cellmaps-coembedding: 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Found link https://files.pythonhosted.org/packages/11/7b/a5303f6c6a0db1cbc6425992ea02e701f3537d0a506e7f9669826d4dc7d5/cellmaps_coembedding-0.1.0a4.tar.gz#sha256=2096693b8bd4a5b332efef89f60b52de85c0986a2436d1592e28ca0e2a434931 (from https://pypi.org/simple/cellmaps-coembedding/), version: 0.1.0a4 2025-09-17T10:29:11,864 Skipping link: No binaries permitted for cellmaps-coembedding: https://files.pythonhosted.org/packages/6e/8a/ec7baea22a2399e9694aefc55aff826a8987e21565d431ddf5dc58613a6a/cellmaps_coembedding-0.1.0a5-py2.py3-none-any.whl#sha256=b02ec6c5007ffcd3d6bfc06591d1fd74c56eca45f75529b050bb2bfc4e529760 (from https://pypi.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,864 Found link https://files.pythonhosted.org/packages/43/e7/96c5734d48eb026ead2bf087bb8424fe0f654dfe4a4a95b9679c1a7e054d/cellmaps_coembedding-0.1.0a5.tar.gz#sha256=a7307e9beabac5f5d615cc9a3464186b9449b7b0b93a22b252194d91af0f5265 (from https://pypi.org/simple/cellmaps-coembedding/), version: 0.1.0a5 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Found link https://files.pythonhosted.org/packages/f1/ed/d27b1cd00b5cd59b169d73e55c3ef348fd7a8cfc2c5122e708509425d6a9/cellmaps_coembedding-0.1.0a8.tar.gz#sha256=210ed39b7ce44b87b2ece5819cba7c5be377897eebb427fb388d9a0324167b24 (from https://pypi.org/simple/cellmaps-coembedding/), version: 0.1.0a8 2025-09-17T10:29:11,866 Skipping link: No binaries permitted for cellmaps-coembedding: https://files.pythonhosted.org/packages/ac/02/1647f42d2d9c1ee10e08e2e414eb74868ba5ad2b08264760b01f1cbbd176/cellmaps_coembedding-0.1.0a9-py2.py3-none-any.whl#sha256=1f61ee4773a1fdd1e0510fbb5976c8ef417ad5acacd1520885c1fbfbaf956a87 (from https://pypi.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,866 Found link https://files.pythonhosted.org/packages/f1/6b/9348ab61f860b79047c55b8012207c52181122e1d24b042b90f39b48a57c/cellmaps_coembedding-0.1.0a9.tar.gz#sha256=04d66faf4ebdc58cdda9be8966242a3ab413c9c6d7ef98cb5e0bbc076adf0413 (from https://pypi.org/simple/cellmaps-coembedding/), version: 0.1.0a9 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Found link https://files.pythonhosted.org/packages/e9/a5/50c74324515b917ffb31bf2fcc9be10ae3d6ad968dc43f7516b78e317469/cellmaps_coembedding-0.1.0a13.tar.gz#sha256=b793058c9446374a93c9cf37b1cd68fa49de2810f3d19c6c7d29e3e5a6cf93cb (from https://pypi.org/simple/cellmaps-coembedding/), version: 0.1.0a13 2025-09-17T10:29:11,868 Skipping link: No binaries permitted for cellmaps-coembedding: https://files.pythonhosted.org/packages/b7/91/7d44853060d37cfe80cbc659d3feb045578a9772457950f751a75ab9d690/cellmaps_coembedding-0.1.0-py2.py3-none-any.whl#sha256=959f14c7f831d02b413ac2912c99bd3ebb5a78233dc6a779fed35312c6c1f5a6 (from https://pypi.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,868 Found link https://files.pythonhosted.org/packages/d4/60/acc082e0aa45efe15a2017ee1ebc01f372ab9db4a0f048809c6233cd5992/cellmaps_coembedding-0.1.0.tar.gz#sha256=97fc0412f0053be03bd77d4181dbcb23182d04454353338bd1cb73a5c49b3a21 (from https://pypi.org/simple/cellmaps-coembedding/), version: 0.1.0 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https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-1.2.0-py2.py3-none-any.whl#sha256=ed17a21b7d530c02130710bc116758451a6251304ffd645d7b43c1bc00e4071d (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,967 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-1.2.0a1-py2.py3-none-any.whl#sha256=d38922bf6a03025acec7bfcb1e8f2acf15a6e24c81ee23c043474467c3da3eac (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,968 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-1.1.0-py2.py3-none-any.whl#sha256=73270be8afc450948570a306eed187bd0b49fb474dd449dbfe6f8b2663485533 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,968 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-1.1.0a1-py2.py3-none-any.whl#sha256=974e833478b96113998fdd8be926336c5a1f97406adbfec5dc4049e0605dead2 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,968 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-1.0.0-py2.py3-none-any.whl#sha256=f721adadf01c86ad19d333539a0f65f3c5689d28b1714342778c806c6c1c7659 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,968 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-1.0.0a1-py2.py3-none-any.whl#sha256=7b52234a16c34a5d7564f72f7ff481ff192558b6a9a3e02b959f3a8b53eea0a0 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,969 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.4.0-py2.py3-none-any.whl#sha256=276840d25101623b6cfef576faa493427c3240db01c8d9336457a2b0b1d55cdb (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,969 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.4.0a1-py2.py3-none-any.whl#sha256=2c4daf73f3e422bafaa8030b65f88e6ed4c1e72a78eb03acb893e170006e777a (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,969 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.3.1-py2.py3-none-any.whl#sha256=45352f0f24b848f78e4ccf473cfa888b33d9f2e5b55c92ed0b8125f73da2091a (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,969 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.3.1a1-py2.py3-none-any.whl#sha256=a725bc31429bd4795e8b33e0a0c49aaf715c75a810aa87dbe5198e09731dfa85 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,969 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.3.0-py2.py3-none-any.whl#sha256=17f04ed02689f0b342f8045065e217b22851c82865c5215f7092fc0853e4da46 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,970 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.3.0a1-py2.py3-none-any.whl#sha256=f06cd14ccbdeca94209388682b8ea039aaf2f50914fa2ad277cb86079bf41a62 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,970 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.2.0-py2.py3-none-any.whl#sha256=bc8e3a1ecd8b78bfd64602275ee5dce57882b3377e6da6f10dfaa7be75634968 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,970 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.2.0a1-py2.py3-none-any.whl#sha256=97d3a4a15eeeedfd1b9b1a72deb56784d63679ce8c0f189ec5eca8ec896e1477 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,970 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0-py2.py3-none-any.whl#sha256=c722faf2a10b339174b558ee9256550230ee23d929d3e96dd5c6bf4ac180285e (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,970 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a13-py2.py3-none-any.whl#sha256=99042806c8f5f366e844fe4e2ea9edbaa1c895b1508c282fe357bf9d4db5088e (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,971 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a12-py2.py3-none-any.whl#sha256=aab7de61e7f49eb8a19c18624827a93eddd031801f125ff72d3af846ca2db4ee (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,971 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a10-py2.py3-none-any.whl#sha256=f57159f98b24c98b9a2145f4f4ecc4e492a22c530793aaae2f40455f151bf19e (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,971 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a9-py2.py3-none-any.whl#sha256=5850df1de18394e8d2ea5556fd32da584bfe79c7e997f5665473dc273412f7f0 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,971 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a8-py2.py3-none-any.whl#sha256=9cc960bcc4c52505e87c8114be7d7339000195e5d4858303bcceea70ca41c996 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,972 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a7-py2.py3-none-any.whl#sha256=26b5c16dd7b24dca3bed62847c53e53b661265289a06c5624833429783a9a0cd (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,972 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a6-py2.py3-none-any.whl#sha256=da10e7d509e2ebb1c8ea9b58403842638b5dfb1ffd8c8077d91c83f059f4d5fe (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,972 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a5-py2.py3-none-any.whl#sha256=dced0740ae987befccd49f1acb1f52b9c6d53d60080f32c4a461edfd9a653366 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,972 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a4-py2.py3-none-any.whl#sha256=0d28be5d9c66202f6a59b48834df68207a92d53126aaf36b7ccf8be5160ab3ef (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,972 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a3-py2.py3-none-any.whl#sha256=35281f5edf535a1c575f7ee49df1200286182e9a5421ca82f4bac297a15fc977 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,973 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a2-py2.py3-none-any.whl#sha256=621cf6b3e45281d3ae938b3fc32817e00990efac39205f0006c1a8e3848908c3 (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:11,973 Skipping link: No binaries permitted for cellmaps-coembedding: https://archive1.piwheels.org/simple/cellmaps-coembedding/cellmaps_coembedding-0.1.0a1-py2.py3-none-any.whl#sha256=fed0938e921026749bf03b154e86b6504a9fc075d356a55e1edaf0faa9c8af7d (from https://www.piwheels.org/simple/cellmaps-coembedding/) 2025-09-17T10:29:12,010 Given no hashes to check 1 links for project 'cellmaps-coembedding': discarding no candidates 2025-09-17T10:29:12,068 Collecting cellmaps-coembedding==1.2.1a1 2025-09-17T10:29:12,069 Created temporary directory: /tmp/pip-unpack-ldeutch9 2025-09-17T10:29:12,073 Starting new HTTPS connection (1): files.pythonhosted.org:443 2025-09-17T10:29:12,107 https://files.pythonhosted.org:443 "GET /packages/e1/54/d98116c0ba8271390dfc804d2a4dadc45be11537ac73a8fd5d8ec8e0a306/cellmaps_coembedding-1.2.1a1.tar.gz HTTP/1.1" 200 227201 2025-09-17T10:29:12,108 Downloading cellmaps_coembedding-1.2.1a1.tar.gz (227 kB) 2025-09-17T10:29:13,275 Added cellmaps-coembedding==1.2.1a1 from https://files.pythonhosted.org/packages/e1/54/d98116c0ba8271390dfc804d2a4dadc45be11537ac73a8fd5d8ec8e0a306/cellmaps_coembedding-1.2.1a1.tar.gz#sha256=7819122b17870b9573395a14e1bcc41aefbc96162248b337ee41fcb98651a7d8 to build tracker '/tmp/pip-req-tracker-7z55qdap' 2025-09-17T10:29:13,276 Running setup.py (path:/tmp/pip-wheel-qzw2jooe/cellmaps-coembedding_c9e4367c1f2a4b5eaa611304af512502/setup.py) egg_info for package cellmaps-coembedding 2025-09-17T10:29:13,276 Created temporary directory: /tmp/pip-pip-egg-info-prww46fe 2025-09-17T10:29:13,277 Running command python setup.py egg_info 2025-09-17T10:29:14,374 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-17T10:29:14,375 !! 2025-09-17T10:29:14,375 ******************************************************************************** 2025-09-17T10:29:14,375 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-17T10:29:14,376 License :: OSI Approved :: MIT License 2025-09-17T10:29:14,376 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-17T10:29:14,377 ******************************************************************************** 2025-09-17T10:29:14,377 !! 2025-09-17T10:29:14,378 self._finalize_license_expression() 2025-09-17T10:29:14,403 running egg_info 2025-09-17T10:29:14,430 creating /tmp/pip-pip-egg-info-prww46fe/cellmaps_coembedding.egg-info 2025-09-17T10:29:14,431 writing /tmp/pip-pip-egg-info-prww46fe/cellmaps_coembedding.egg-info/PKG-INFO 2025-09-17T10:29:14,435 writing dependency_links to /tmp/pip-pip-egg-info-prww46fe/cellmaps_coembedding.egg-info/dependency_links.txt 2025-09-17T10:29:14,438 writing requirements to /tmp/pip-pip-egg-info-prww46fe/cellmaps_coembedding.egg-info/requires.txt 2025-09-17T10:29:14,439 writing top-level names to /tmp/pip-pip-egg-info-prww46fe/cellmaps_coembedding.egg-info/top_level.txt 2025-09-17T10:29:14,440 writing manifest file '/tmp/pip-pip-egg-info-prww46fe/cellmaps_coembedding.egg-info/SOURCES.txt' 2025-09-17T10:29:14,556 reading manifest file '/tmp/pip-pip-egg-info-prww46fe/cellmaps_coembedding.egg-info/SOURCES.txt' 2025-09-17T10:29:14,558 reading manifest template 'MANIFEST.in' 2025-09-17T10:29:14,564 warning: no previously-included files matching '__pycache__' found under directory '*' 2025-09-17T10:29:14,564 warning: no previously-included files matching '*.py[co]' found under directory '*' 2025-09-17T10:29:14,603 warning: no files found matching '*.jpg' under directory 'docs' 2025-09-17T10:29:14,622 warning: no files found matching '*.gif' under directory 'docs' 2025-09-17T10:29:14,622 adding license file 'LICENSE' 2025-09-17T10:29:14,622 adding license file 'AUTHORS.rst' 2025-09-17T10:29:14,627 writing manifest file '/tmp/pip-pip-egg-info-prww46fe/cellmaps_coembedding.egg-info/SOURCES.txt' 2025-09-17T10:29:14,720 Source in /tmp/pip-wheel-qzw2jooe/cellmaps-coembedding_c9e4367c1f2a4b5eaa611304af512502 has version 1.2.1a1, which satisfies requirement cellmaps-coembedding==1.2.1a1 from https://files.pythonhosted.org/packages/e1/54/d98116c0ba8271390dfc804d2a4dadc45be11537ac73a8fd5d8ec8e0a306/cellmaps_coembedding-1.2.1a1.tar.gz#sha256=7819122b17870b9573395a14e1bcc41aefbc96162248b337ee41fcb98651a7d8 2025-09-17T10:29:14,721 Removed cellmaps-coembedding==1.2.1a1 from https://files.pythonhosted.org/packages/e1/54/d98116c0ba8271390dfc804d2a4dadc45be11537ac73a8fd5d8ec8e0a306/cellmaps_coembedding-1.2.1a1.tar.gz#sha256=7819122b17870b9573395a14e1bcc41aefbc96162248b337ee41fcb98651a7d8 from build tracker '/tmp/pip-req-tracker-7z55qdap' 2025-09-17T10:29:14,726 Created temporary directory: /tmp/pip-unpack-uutsyrs4 2025-09-17T10:29:14,726 Building wheels for collected packages: cellmaps-coembedding 2025-09-17T10:29:14,731 Created temporary directory: /tmp/pip-wheel-zs2w3gy_ 2025-09-17T10:29:14,731 Building wheel for cellmaps-coembedding (setup.py): started 2025-09-17T10:29:14,732 Destination directory: /tmp/pip-wheel-zs2w3gy_ 2025-09-17T10:29:14,732 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-qzw2jooe/cellmaps-coembedding_c9e4367c1f2a4b5eaa611304af512502/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-qzw2jooe/cellmaps-coembedding_c9e4367c1f2a4b5eaa611304af512502/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-zs2w3gy_ 2025-09-17T10:29:15,603 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-09-17T10:29:15,604 !! 2025-09-17T10:29:15,604 ******************************************************************************** 2025-09-17T10:29:15,604 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-09-17T10:29:15,605 License :: OSI Approved :: MIT License 2025-09-17T10:29:15,605 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-17T10:29:15,605 ******************************************************************************** 2025-09-17T10:29:15,606 !! 2025-09-17T10:29:15,606 self._finalize_license_expression() 2025-09-17T10:29:15,606 running bdist_wheel 2025-09-17T10:29:15,685 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:135: SetuptoolsDeprecationWarning: bdist_wheel.universal is deprecated 2025-09-17T10:29:15,685 !! 2025-09-17T10:29:15,685 ******************************************************************************** 2025-09-17T10:29:15,686 With Python 2.7 end-of-life, support for building universal wheels 2025-09-17T10:29:15,686 (i.e., wheels that support both Python 2 and Python 3) 2025-09-17T10:29:15,686 is being obviated. 2025-09-17T10:29:15,686 Please discontinue using this option, or if you still need it, 2025-09-17T10:29:15,687 file an issue with pypa/setuptools describing your use case. 2025-09-17T10:29:15,687 This deprecation is overdue, please update your project and remove deprecated 2025-09-17T10:29:15,688 calls to avoid build errors in the future. 2025-09-17T10:29:15,688 ******************************************************************************** 2025-09-17T10:29:15,688 !! 2025-09-17T10:29:15,689 self.finalize_options() 2025-09-17T10:29:15,956 running build 2025-09-17T10:29:15,956 running build_py 2025-09-17T10:29:15,986 creating build/lib/cellmaps_coembedding 2025-09-17T10:29:15,988 copying cellmaps_coembedding/runner.py -> build/lib/cellmaps_coembedding 2025-09-17T10:29:15,995 copying cellmaps_coembedding/exceptions.py -> build/lib/cellmaps_coembedding 2025-09-17T10:29:15,999 copying cellmaps_coembedding/cellmaps_coembeddingcmd.py -> build/lib/cellmaps_coembedding 2025-09-17T10:29:16,002 copying cellmaps_coembedding/utils.py -> build/lib/cellmaps_coembedding 2025-09-17T10:29:16,005 copying cellmaps_coembedding/__init__.py -> build/lib/cellmaps_coembedding 2025-09-17T10:29:16,007 creating build/lib/cellmaps_coembedding/protein_gps 2025-09-17T10:29:16,008 copying cellmaps_coembedding/protein_gps/__init__.py -> build/lib/cellmaps_coembedding/protein_gps 2025-09-17T10:29:16,011 copying cellmaps_coembedding/protein_gps/architecture.py -> build/lib/cellmaps_coembedding/protein_gps 2025-09-17T10:29:16,014 creating build/lib/cellmaps_coembedding/muse_sc 2025-09-17T10:29:16,015 copying cellmaps_coembedding/muse_sc/triplet_loss.py -> build/lib/cellmaps_coembedding/muse_sc 2025-09-17T10:29:16,018 copying cellmaps_coembedding/muse_sc/df_utils.py -> build/lib/cellmaps_coembedding/muse_sc 2025-09-17T10:29:16,020 copying cellmaps_coembedding/muse_sc/__init__.py -> build/lib/cellmaps_coembedding/muse_sc 2025-09-17T10:29:16,023 copying cellmaps_coembedding/muse_sc/file_utils.py -> build/lib/cellmaps_coembedding/muse_sc 2025-09-17T10:29:16,026 copying cellmaps_coembedding/muse_sc/architecture.py -> build/lib/cellmaps_coembedding/muse_sc 2025-09-17T10:29:16,028 running egg_info 2025-09-17T10:29:16,056 writing cellmaps_coembedding.egg-info/PKG-INFO 2025-09-17T10:29:16,060 writing dependency_links to cellmaps_coembedding.egg-info/dependency_links.txt 2025-09-17T10:29:16,062 writing requirements to cellmaps_coembedding.egg-info/requires.txt 2025-09-17T10:29:16,063 writing top-level names to cellmaps_coembedding.egg-info/top_level.txt 2025-09-17T10:29:16,096 reading manifest file 'cellmaps_coembedding.egg-info/SOURCES.txt' 2025-09-17T10:29:16,101 reading manifest template 'MANIFEST.in' 2025-09-17T10:29:16,107 warning: no previously-included files matching '__pycache__' found under directory '*' 2025-09-17T10:29:16,108 warning: no previously-included files matching '*.py[co]' found under directory '*' 2025-09-17T10:29:16,142 warning: no files found matching '*.jpg' under directory 'docs' 2025-09-17T10:29:16,166 warning: no files found matching '*.gif' under directory 'docs' 2025-09-17T10:29:16,166 adding license file 'LICENSE' 2025-09-17T10:29:16,166 adding license file 'AUTHORS.rst' 2025-09-17T10:29:16,172 writing manifest file 'cellmaps_coembedding.egg-info/SOURCES.txt' 2025-09-17T10:29:16,177 copying cellmaps_coembedding/corum_M.tsv -> build/lib/cellmaps_coembedding 2025-09-17T10:29:17,104 copying cellmaps_coembedding/readme_outputs.txt -> build/lib/cellmaps_coembedding 2025-09-17T10:29:17,108 running build_scripts 2025-09-17T10:29:17,108 creating build/scripts-3.9 2025-09-17T10:29:17,109 copying and adjusting cellmaps_coembedding/cellmaps_coembeddingcmd.py -> build/scripts-3.9 2025-09-17T10:29:17,112 changing mode of build/scripts-3.9/cellmaps_coembeddingcmd.py from 644 to 755 2025-09-17T10:29:17,138 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-17T10:29:17,138 !! 2025-09-17T10:29:17,138 ******************************************************************************** 2025-09-17T10:29:17,139 Please avoid running ``setup.py`` directly. 2025-09-17T10:29:17,139 Instead, use pypa/build, pypa/installer or other 2025-09-17T10:29:17,139 standards-based tools. 2025-09-17T10:29:17,139 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-17T10:29:17,139 or your builds will no longer be supported. 2025-09-17T10:29:17,140 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-17T10:29:17,140 ******************************************************************************** 2025-09-17T10:29:17,140 !! 2025-09-17T10:29:17,140 self.initialize_options() 2025-09-17T10:29:17,166 installing to build/bdist.linux-armv7l/wheel 2025-09-17T10:29:17,167 running install 2025-09-17T10:29:17,187 running install_lib 2025-09-17T10:29:17,214 creating build/bdist.linux-armv7l/wheel 2025-09-17T10:29:17,216 creating build/bdist.linux-armv7l/wheel/cellmaps_coembedding 2025-09-17T10:29:17,217 copying build/lib/cellmaps_coembedding/runner.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding 2025-09-17T10:29:17,316 copying build/lib/cellmaps_coembedding/corum_M.tsv -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding 2025-09-17T10:29:18,234 copying build/lib/cellmaps_coembedding/exceptions.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding 2025-09-17T10:29:18,235 copying build/lib/cellmaps_coembedding/readme_outputs.txt -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding 2025-09-17T10:29:18,238 creating build/bdist.linux-armv7l/wheel/cellmaps_coembedding/protein_gps 2025-09-17T10:29:18,239 copying build/lib/cellmaps_coembedding/protein_gps/__init__.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding/protein_gps 2025-09-17T10:29:18,242 copying build/lib/cellmaps_coembedding/protein_gps/architecture.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding/protein_gps 2025-09-17T10:29:18,245 copying build/lib/cellmaps_coembedding/cellmaps_coembeddingcmd.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding 2025-09-17T10:29:18,247 copying build/lib/cellmaps_coembedding/utils.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding 2025-09-17T10:29:18,249 copying build/lib/cellmaps_coembedding/__init__.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding 2025-09-17T10:29:18,251 creating build/bdist.linux-armv7l/wheel/cellmaps_coembedding/muse_sc 2025-09-17T10:29:18,252 copying build/lib/cellmaps_coembedding/muse_sc/triplet_loss.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding/muse_sc 2025-09-17T10:29:18,255 copying build/lib/cellmaps_coembedding/muse_sc/df_utils.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding/muse_sc 2025-09-17T10:29:18,257 copying build/lib/cellmaps_coembedding/muse_sc/__init__.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding/muse_sc 2025-09-17T10:29:18,260 copying build/lib/cellmaps_coembedding/muse_sc/file_utils.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding/muse_sc 2025-09-17T10:29:18,262 copying build/lib/cellmaps_coembedding/muse_sc/architecture.py -> build/bdist.linux-armv7l/wheel/./cellmaps_coembedding/muse_sc 2025-09-17T10:29:18,264 running install_egg_info 2025-09-17T10:29:18,297 Copying cellmaps_coembedding.egg-info to build/bdist.linux-armv7l/wheel/./cellmaps_coembedding-1.2.1a1-py3.9.egg-info 2025-09-17T10:29:18,308 running install_scripts 2025-09-17T10:29:18,310 creating build/bdist.linux-armv7l/wheel/cellmaps_coembedding-1.2.1a1.data/scripts 2025-09-17T10:29:18,311 copying build/scripts-3.9/cellmaps_coembeddingcmd.py -> build/bdist.linux-armv7l/wheel/cellmaps_coembedding-1.2.1a1.data/scripts 2025-09-17T10:29:18,314 changing mode of build/bdist.linux-armv7l/wheel/cellmaps_coembedding-1.2.1a1.data/scripts/cellmaps_coembeddingcmd.py to 755 2025-09-17T10:29:18,328 creating build/bdist.linux-armv7l/wheel/cellmaps_coembedding-1.2.1a1.dist-info/WHEEL 2025-09-17T10:29:18,331 creating '/tmp/pip-wheel-zs2w3gy_/cellmaps_coembedding-1.2.1a1-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-17T10:29:18,333 adding 'cellmaps_coembedding/__init__.py' 2025-09-17T10:29:18,336 adding 'cellmaps_coembedding/cellmaps_coembeddingcmd.py' 2025-09-17T10:29:19,219 adding 'cellmaps_coembedding/corum_M.tsv' 2025-09-17T10:29:19,460 adding 'cellmaps_coembedding/exceptions.py' 2025-09-17T10:29:19,461 adding 'cellmaps_coembedding/readme_outputs.txt' 2025-09-17T10:29:19,465 adding 'cellmaps_coembedding/runner.py' 2025-09-17T10:29:19,468 adding 'cellmaps_coembedding/utils.py' 2025-09-17T10:29:19,471 adding 'cellmaps_coembedding/muse_sc/__init__.py' 2025-09-17T10:29:19,472 adding 'cellmaps_coembedding/muse_sc/architecture.py' 2025-09-17T10:29:19,474 adding 'cellmaps_coembedding/muse_sc/df_utils.py' 2025-09-17T10:29:19,475 adding 'cellmaps_coembedding/muse_sc/file_utils.py' 2025-09-17T10:29:19,476 adding 'cellmaps_coembedding/muse_sc/triplet_loss.py' 2025-09-17T10:29:19,479 adding 'cellmaps_coembedding/protein_gps/__init__.py' 2025-09-17T10:29:19,481 adding 'cellmaps_coembedding/protein_gps/architecture.py' 2025-09-17T10:29:19,484 adding 'cellmaps_coembedding-1.2.1a1.data/scripts/cellmaps_coembeddingcmd.py' 2025-09-17T10:29:19,486 adding 'cellmaps_coembedding-1.2.1a1.dist-info/licenses/AUTHORS.rst' 2025-09-17T10:29:19,487 adding 'cellmaps_coembedding-1.2.1a1.dist-info/licenses/LICENSE' 2025-09-17T10:29:19,489 adding 'cellmaps_coembedding-1.2.1a1.dist-info/METADATA' 2025-09-17T10:29:19,490 adding 'cellmaps_coembedding-1.2.1a1.dist-info/WHEEL' 2025-09-17T10:29:19,491 adding 'cellmaps_coembedding-1.2.1a1.dist-info/top_level.txt' 2025-09-17T10:29:19,492 adding 'cellmaps_coembedding-1.2.1a1.dist-info/RECORD' 2025-09-17T10:29:19,496 removing build/bdist.linux-armv7l/wheel 2025-09-17T10:29:19,602 Building wheel for cellmaps-coembedding (setup.py): finished with status 'done' 2025-09-17T10:29:19,606 Created wheel for cellmaps-coembedding: filename=cellmaps_coembedding-1.2.1a1-py2.py3-none-any.whl size=244424 sha256=bab49b1cd2d127fb370a695cb423af6188ec79fe15208efb970d0935012964b5 2025-09-17T10:29:19,606 Stored in directory: /tmp/pip-ephem-wheel-cache-e99jam7j/wheels/8f/d7/b7/b6f3c0ad17ace2caf3a20fa170bb71b3d4c018b6d3b3d9ffb0 2025-09-17T10:29:19,615 Successfully built cellmaps-coembedding 2025-09-17T10:29:19,624 Removed build tracker: '/tmp/pip-req-tracker-7z55qdap'