2025-09-24T13:26:21,634 Created temporary directory: /tmp/pip-build-tracker-zfo40_sb 2025-09-24T13:26:21,635 Initialized build tracking at /tmp/pip-build-tracker-zfo40_sb 2025-09-24T13:26:21,635 Created build tracker: /tmp/pip-build-tracker-zfo40_sb 2025-09-24T13:26:21,636 Entered build tracker: /tmp/pip-build-tracker-zfo40_sb 2025-09-24T13:26:21,637 Created temporary directory: /tmp/pip-wheel-4vzc2q9a 2025-09-24T13:26:21,641 Created temporary directory: /tmp/pip-ephem-wheel-cache-ydzk5ows 2025-09-24T13:26:21,692 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-24T13:26:21,694 2 location(s) to search for versions of bpnet: 2025-09-24T13:26:21,694 * https://pypi.org/simple/bpnet/ 2025-09-24T13:26:21,694 * https://www.piwheels.org/simple/bpnet/ 2025-09-24T13:26:21,695 Fetching project page and analyzing links: https://pypi.org/simple/bpnet/ 2025-09-24T13:26:21,696 Getting page https://pypi.org/simple/bpnet/ 2025-09-24T13:26:21,698 Found index url https://pypi.org/simple/ 2025-09-24T13:26:21,922 Fetched page https://pypi.org/simple/bpnet/ as application/vnd.pypi.simple.v1+json 2025-09-24T13:26:21,926 Found link https://files.pythonhosted.org/packages/ba/03/8adc2cff22e10c6e89ad545cf9d27f9e984ac5477b75ca9840003f4f185a/bpnet-0.0.1.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.1 2025-09-24T13:26:21,927 Found link https://files.pythonhosted.org/packages/f5/c6/d7abd1b4840ecb6128a0231deed1ff3f4fea58b508913f3ba7d2bfb31afe/bpnet-0.0.2.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.2 2025-09-24T13:26:21,927 Found link https://files.pythonhosted.org/packages/d8/8f/d5e48991dd931828d7163067e39561935c88b7c6cb528ca7445bf1887848/bpnet-0.0.3.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.3 2025-09-24T13:26:21,928 Found link https://files.pythonhosted.org/packages/02/04/240d91c9ebde1232e723887c997761a3e00bfdaa457c5c3af21eaf952e8a/bpnet-0.0.4.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.4 2025-09-24T13:26:21,929 Found link https://files.pythonhosted.org/packages/95/50/f6a4f5df5301f8b97bc4894d56ee753a053b0007a3950c2a7255da7c7462/bpnet-0.0.5.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.5 2025-09-24T13:26:21,929 Found link https://files.pythonhosted.org/packages/7d/79/4d521bdf41212588a28a23d75a5ca8ab1851a7bd094b75125e45259b3444/bpnet-0.0.6.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.6 2025-09-24T13:26:21,930 Found link https://files.pythonhosted.org/packages/f8/8d/77c1880359c12905137cb33e2e108749368f746925cf5b0191968ce11f42/bpnet-0.0.7.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.7 2025-09-24T13:26:21,931 Found link https://files.pythonhosted.org/packages/46/ce/604ba9ac841d6f3fec1907ea91091a7b36805d6bdd9cfa43acc5fa161037/bpnet-0.0.8.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.8 2025-09-24T13:26:21,932 Found link https://files.pythonhosted.org/packages/45/8c/c6c3c549baa9f7168d36eb31f780373d6482f6140247c2ee24b0cd4723da/bpnet-0.0.9.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.9 2025-09-24T13:26:21,933 Found link https://files.pythonhosted.org/packages/1c/09/4d300f74a0ad594f1cbe3a63c8cea55e46cbd7730d4362e44eaba94e40a6/bpnet-0.0.10.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.10 2025-09-24T13:26:21,933 Found link https://files.pythonhosted.org/packages/b7/d3/56f996500eb2808bdcf2ab5026d1e97fa33160643ed83292eb2c748d274a/bpnet-0.0.11.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.11 2025-09-24T13:26:21,934 Found link https://files.pythonhosted.org/packages/38/16/4c0cfc7d99905436f1f90160620a214870d95cc1c150691243936db23986/bpnet-0.0.12.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.12 2025-09-24T13:26:21,935 Found link https://files.pythonhosted.org/packages/f6/ca/cb3abb356c63f60ed2ce905dddefbfd9a4fde336be61319d5cd6c0304787/bpnet-0.0.13.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.13 2025-09-24T13:26:21,935 Found link https://files.pythonhosted.org/packages/c5/39/bf35f2a5636d47e026cd6048cd2a7c35c1af156124bf5695ca26ff2d0ef7/bpnet-0.0.14.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.14 2025-09-24T13:26:21,936 Found link https://files.pythonhosted.org/packages/81/dc/a1686d2293271afb975ec63ae575eba846a0e4c7337a4e8196b80de162d0/bpnet-0.0.15.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.15 2025-09-24T13:26:21,937 Found link https://files.pythonhosted.org/packages/1b/b4/2e0b479186eed56589ed3664193452c12fd2cbb6b17c0740a68dbea9a0d2/bpnet-0.0.16.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.16 2025-09-24T13:26:21,938 Found link https://files.pythonhosted.org/packages/a2/81/32d1c0014100c893c8315bf4d2d30eaf1cc143a50f4ee5f0caac51c92cf6/bpnet-0.0.17.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.17 2025-09-24T13:26:21,938 Found link https://files.pythonhosted.org/packages/0f/14/ef7bc4e2639913afe83230a23577bb558ed8c990420849be042fabaebe9b/bpnet-0.0.18.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.18 2025-09-24T13:26:21,939 Found link https://files.pythonhosted.org/packages/99/d8/add0f43d98b1952922ffb47ee14174962997e76d768ab1922c3734d41a2c/bpnet-0.0.19.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.19 2025-09-24T13:26:21,939 Found link https://files.pythonhosted.org/packages/b7/2d/4803c0bb3c0539085eb9e3841c8a53d2b19fba383bbf6375081842353bae/bpnet-0.0.20.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.20 2025-09-24T13:26:21,940 Found link https://files.pythonhosted.org/packages/9b/fb/a6f86ecc39d45dbe6b8bab824d1d4e893cc28fec125485c066fa2eba6304/bpnet-0.0.21.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.21 2025-09-24T13:26:21,941 Skipping link: No binaries permitted for bpnet: https://files.pythonhosted.org/packages/40/d0/8c96ee34d8316ca850d0a6713a7e0bcf18efc827e1872735cb2c889393e3/bpnet-0.0.22-py3-none-any.whl (from https://pypi.org/simple/bpnet/) 2025-09-24T13:26:21,941 Found link https://files.pythonhosted.org/packages/0b/e4/e7820ec990cba133cd807939d173871ccac21c9a7811897985ee54296bf0/bpnet-0.0.22.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.22 2025-09-24T13:26:21,942 Skipping link: No binaries permitted for bpnet: https://files.pythonhosted.org/packages/6d/0f/6d2a97d10ebe0c67c5cc887d5abef3b62409adb1355ae872357baba41765/bpnet-0.0.23-py3-none-any.whl (from https://pypi.org/simple/bpnet/) 2025-09-24T13:26:21,942 Found link https://files.pythonhosted.org/packages/5b/3b/5a611fbd7aa3460b95c43ceb002a12803dfd0770faf5c078cc333d2fae85/bpnet-0.0.23.tar.gz (from https://pypi.org/simple/bpnet/), version: 0.0.23 2025-09-24T13:26:21,943 Skipping link: No binaries permitted for bpnet: https://files.pythonhosted.org/packages/23/50/4829059e3a47964ce969eabdac44ee0d2367b4381cf41cbf7782a2938e6d/bpnet-2.0.0-py3-none-any.whl (from https://pypi.org/simple/bpnet/) 2025-09-24T13:26:21,944 Found link https://files.pythonhosted.org/packages/fc/d1/879734061a182666ce2a16e1257ac5c2f10c16a42004f8e9e238825caf48/bpnet-2.0.0.tar.gz (from https://pypi.org/simple/bpnet/), version: 2.0.0 2025-09-24T13:26:21,944 Fetching project page and analyzing links: https://www.piwheels.org/simple/bpnet/ 2025-09-24T13:26:21,945 Getting page https://www.piwheels.org/simple/bpnet/ 2025-09-24T13:26:21,947 Found index url https://www.piwheels.org/simple/ 2025-09-24T13:26:22,117 Fetched page https://www.piwheels.org/simple/bpnet/ as text/html 2025-09-24T13:26:22,122 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.23-py3-none-any.whl#sha256=16a3c686145c41939381f13558d11f6967f7530a14d44a97b001af257bcaaf8f (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,123 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.22-py3-none-any.whl#sha256=8ac6ecf6e4b21e5a3d1c2eff7471cc8f084065e815ac79a43046c7e2ab93bed7 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,124 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.21-py3-none-any.whl#sha256=8f51bd14474976e43e0ffc8158c00b2cab5f37cb8fa273f3bb35993705f91928 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,124 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.20-py3-none-any.whl#sha256=74e879ea19c6a0ae2132e27b72d35d074f0c2991f1b79574a24c63e2a514fb7d (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,125 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.19-py3-none-any.whl#sha256=4a680602da2ba30f29edacd3fef9057cc5ca1a56954a864ef46464b832fbdc36 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,126 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.18-py3-none-any.whl#sha256=194e19defad0132f56d4e23dff4ec3ec31876849dd9deddf6545c5746faaf64b (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,126 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.17-py3-none-any.whl#sha256=66d4e1cf0b701485a42a6b2aa536d9ad638c5ab2318308122112e4f00d2a8d20 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,127 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.16-py3-none-any.whl#sha256=bf1f863f0cf529367911ab3b1eec5c7e36539bb481a71a9e068e0a8df4cb2bd6 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,127 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.15-py3-none-any.whl#sha256=baee1fe531c560e661bd63841ac7a0eaa246f5b34015af5e0f33706f0a90f4f8 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,128 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.14-py3-none-any.whl#sha256=53b370fa1daae3873b5bc42881464b16f4ca0dfc66775cd8e993f91c2cf6b106 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,128 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.13-py3-none-any.whl#sha256=c623066b48181d06f0e1125d56a3ca73749047ab88a800154ab72884123e2859 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,128 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.12-py3-none-any.whl#sha256=9a7a3f283d5c7180dd5a9ee0632497d48e75a8d84cc898072660116bf948f2b9 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,129 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.11-py3-none-any.whl#sha256=990c2ccc6eb0e8880b0edaeb614be76daf6844d76097285a7e8a73a6dbb2355c (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,130 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.10-py3-none-any.whl#sha256=f4331b08edd30b368a7235d76b3605e063c28ee44988ebe902479459a231ef34 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,130 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.9-py3-none-any.whl#sha256=65181607c7f851087f482480137613f203a7eb6a63afcd07f740017eafc30bd7 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,131 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.8-py3-none-any.whl#sha256=2aaf11b0d16ed83a658bd06ccb1f484ceebe724fc8bae79d5cb07b7cb8726161 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,132 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.7-py3-none-any.whl#sha256=2a45cce44aabaaffa082a1a8ac80c735eaeee96342ee6e936db9a2cebb994037 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,132 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.6-py3-none-any.whl#sha256=004c05513ef4f8d60db5777cb608e9a296788e42b405f4aa5a14a2f8ad4a7407 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,133 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.5-py3-none-any.whl#sha256=44cf0bc89c9e915912ed87d97a9e2f602ce65d81cb08dbf168b5e102a09e9470 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,133 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.4-py3-none-any.whl#sha256=f03bfd5aac7168dcdb64f789e8e072a75fc7bdc60675c837547df71b0d1342c9 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,134 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.3-py3-none-any.whl#sha256=8ccf11028d126211e1efa9218d0c9c81ab19094506339596c37d1526d994c1d4 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,135 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.2-py3-none-any.whl#sha256=16822bb85dd550a41821fd9fff55919abbd7879f7db812f405c190a8e5ff1e25 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,135 Skipping link: No binaries permitted for bpnet: https://archive1.piwheels.org/simple/bpnet/bpnet-0.0.1-py3-none-any.whl#sha256=95b3e9f90504928bba6eb0770c084597e3ffd68b7278bc09203573b189e113a7 (from https://www.piwheels.org/simple/bpnet/) 2025-09-24T13:26:22,136 Skipping link: not a file: https://www.piwheels.org/simple/bpnet/ 2025-09-24T13:26:22,136 Skipping link: not a file: https://pypi.org/simple/bpnet/ 2025-09-24T13:26:22,157 Given no hashes to check 1 links for project 'bpnet': discarding no candidates 2025-09-24T13:26:22,159 Collecting bpnet==2.0.0 2025-09-24T13:26:22,161 Created temporary directory: /tmp/pip-unpack-al99wrj9 2025-09-24T13:26:22,379 Downloading bpnet-2.0.0.tar.gz (83 kB) 2025-09-24T13:26:22,544 Added bpnet==2.0.0 from https://files.pythonhosted.org/packages/fc/d1/879734061a182666ce2a16e1257ac5c2f10c16a42004f8e9e238825caf48/bpnet-2.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-zfo40_sb' 2025-09-24T13:26:22,547 Running setup.py (path:/tmp/pip-wheel-4vzc2q9a/bpnet_3c286803040c431883dbde4d081f8b39/setup.py) egg_info for package bpnet 2025-09-24T13:26:22,548 Created temporary directory: /tmp/pip-pip-egg-info-7aaf_vfx 2025-09-24T13:26:22,549 Preparing metadata (setup.py): started 2025-09-24T13:26:22,550 Running command python setup.py egg_info 2025-09-24T13:26:23,156 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-24T13:26:23,156 warnings.warn(msg) 2025-09-24T13:26:23,157 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-09-24T13:26:23,157 warnings.warn(msg) 2025-09-24T13:26:23,494 running egg_info 2025-09-24T13:26:23,521 creating /tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info 2025-09-24T13:26:23,521 writing /tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info/PKG-INFO 2025-09-24T13:26:23,526 writing dependency_links to /tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info/dependency_links.txt 2025-09-24T13:26:23,528 writing entry points to /tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info/entry_points.txt 2025-09-24T13:26:23,530 writing requirements to /tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info/requires.txt 2025-09-24T13:26:23,531 writing top-level names to /tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info/top_level.txt 2025-09-24T13:26:23,532 writing manifest file '/tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info/SOURCES.txt' 2025-09-24T13:26:23,624 reading manifest file '/tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info/SOURCES.txt' 2025-09-24T13:26:23,626 adding license file 'LICENSE' 2025-09-24T13:26:23,629 writing manifest file '/tmp/pip-pip-egg-info-7aaf_vfx/bpnet.egg-info/SOURCES.txt' 2025-09-24T13:26:23,735 Preparing metadata (setup.py): finished with status 'done' 2025-09-24T13:26:23,738 Source in /tmp/pip-wheel-4vzc2q9a/bpnet_3c286803040c431883dbde4d081f8b39 has version 2.0.0, which satisfies requirement bpnet==2.0.0 from https://files.pythonhosted.org/packages/fc/d1/879734061a182666ce2a16e1257ac5c2f10c16a42004f8e9e238825caf48/bpnet-2.0.0.tar.gz 2025-09-24T13:26:23,739 Removed bpnet==2.0.0 from https://files.pythonhosted.org/packages/fc/d1/879734061a182666ce2a16e1257ac5c2f10c16a42004f8e9e238825caf48/bpnet-2.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-zfo40_sb' 2025-09-24T13:26:23,747 Created temporary directory: /tmp/pip-unpack-wfo2n4ja 2025-09-24T13:26:23,748 Created temporary directory: /tmp/pip-unpack-ni55tb8x 2025-09-24T13:26:23,749 Building wheels for collected packages: bpnet 2025-09-24T13:26:23,752 Created temporary directory: /tmp/pip-wheel-5apohsc6 2025-09-24T13:26:23,753 DEPRECATION: Building 'bpnet' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'bpnet'. Discussion can be found at https://github.com/pypa/pip/issues/6334 2025-09-24T13:26:23,754 Building wheel for bpnet (setup.py): started 2025-09-24T13:26:23,755 Destination directory: /tmp/pip-wheel-5apohsc6 2025-09-24T13:26:23,756 Running command python setup.py bdist_wheel 2025-09-24T13:26:24,297 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' 2025-09-24T13:26:24,297 warnings.warn(msg) 2025-09-24T13:26:24,298 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' 2025-09-24T13:26:24,298 warnings.warn(msg) 2025-09-24T13:26:24,593 running bdist_wheel 2025-09-24T13:26:24,730 running build 2025-09-24T13:26:24,730 running build_py 2025-09-24T13:26:24,761 creating build/lib/bpnet 2025-09-24T13:26:24,763 copying bpnet/__init__.py -> build/lib/bpnet 2025-09-24T13:26:24,765 creating build/lib/test 2025-09-24T13:26:24,766 copying test/__init__.py -> build/lib/test 2025-09-24T13:26:24,768 copying test/test_sequtils.py -> build/lib/test 2025-09-24T13:26:24,771 copying test/test_generators.py -> build/lib/test 2025-09-24T13:26:24,774 creating build/lib/bpnet/generators 2025-09-24T13:26:24,775 copying bpnet/generators/__init__.py -> build/lib/bpnet/generators 2025-09-24T13:26:24,777 copying bpnet/generators/sequtils.py -> build/lib/bpnet/generators 2025-09-24T13:26:24,780 copying bpnet/generators/generators.py -> build/lib/bpnet/generators 2025-09-24T13:26:24,784 creating build/lib/bpnet/utils 2025-09-24T13:26:24,785 copying bpnet/utils/__init__.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,787 copying bpnet/utils/shaputils.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,789 copying bpnet/utils/mean_shap.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,791 copying bpnet/utils/exceptionhandler.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,793 copying bpnet/utils/importance_hdf5_to_bigwig.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,795 copying bpnet/utils/bigwig_helper.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,797 copying bpnet/utils/logger.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,799 copying bpnet/utils/misc.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,801 copying bpnet/utils/counts_loss_weight.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,803 copying bpnet/utils/datetime_custom.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,805 copying bpnet/utils/mean_predictions.py -> build/lib/bpnet/utils 2025-09-24T13:26:24,807 creating build/lib/bpnet/model 2025-09-24T13:26:24,808 copying bpnet/model/__init__.py -> build/lib/bpnet/model 2025-09-24T13:26:24,810 copying bpnet/model/custommodel.py -> build/lib/bpnet/model 2025-09-24T13:26:24,813 copying bpnet/model/losses.py -> build/lib/bpnet/model 2025-09-24T13:26:24,815 copying bpnet/model/bpnetdefaults.py -> build/lib/bpnet/model 2025-09-24T13:26:24,817 copying bpnet/model/arch.py -> build/lib/bpnet/model 2025-09-24T13:26:24,820 creating build/lib/bpnet/train 2025-09-24T13:26:24,821 copying bpnet/train/__init__.py -> build/lib/bpnet/train 2025-09-24T13:26:24,823 copying bpnet/train/training.py -> build/lib/bpnet/train 2025-09-24T13:26:24,827 creating build/lib/bpnet/cli 2025-09-24T13:26:24,828 copying bpnet/cli/shap_scores.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,830 copying bpnet/cli/__init__.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,832 copying bpnet/cli/argparsers.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,835 copying bpnet/cli/outliers.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,837 copying bpnet/cli/predict.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,840 copying bpnet/cli/bpnettrainer.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,842 copying bpnet/cli/counts_loss_weight.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,845 copying bpnet/cli/motif_discovery.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,847 copying bpnet/cli/embeddings.py -> build/lib/bpnet/cli 2025-09-24T13:26:24,851 creating build/lib/bpnet/cli/gc 2025-09-24T13:26:24,852 copying bpnet/cli/gc/__init__.py -> build/lib/bpnet/cli/gc 2025-09-24T13:26:24,853 copying bpnet/cli/gc/get_gc_matched_negatives.py -> build/lib/bpnet/cli/gc 2025-09-24T13:26:24,856 copying bpnet/cli/gc/get_genomewide_gc_bins.py -> build/lib/bpnet/cli/gc 2025-09-24T13:26:24,858 copying bpnet/cli/gc/get_gc_background.py -> build/lib/bpnet/cli/gc 2025-09-24T13:26:24,860 copying bpnet/cli/gc/get_foreground_gc_content.py -> build/lib/bpnet/cli/gc 2025-09-24T13:26:24,862 running egg_info 2025-09-24T13:26:24,889 writing bpnet.egg-info/PKG-INFO 2025-09-24T13:26:24,893 writing dependency_links to bpnet.egg-info/dependency_links.txt 2025-09-24T13:26:24,895 writing entry points to bpnet.egg-info/entry_points.txt 2025-09-24T13:26:24,897 writing requirements to bpnet.egg-info/requires.txt 2025-09-24T13:26:24,899 writing top-level names to bpnet.egg-info/top_level.txt 2025-09-24T13:26:24,936 reading manifest file 'bpnet.egg-info/SOURCES.txt' 2025-09-24T13:26:24,941 adding license file 'LICENSE' 2025-09-24T13:26:24,945 writing manifest file 'bpnet.egg-info/SOURCES.txt' 2025-09-24T13:26:24,980 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2025-09-24T13:26:24,981 !! 2025-09-24T13:26:24,982 ******************************************************************************** 2025-09-24T13:26:24,983 Please avoid running ``setup.py`` directly. 2025-09-24T13:26:24,983 Instead, use pypa/build, pypa/installer or other 2025-09-24T13:26:24,984 standards-based tools. 2025-09-24T13:26:24,985 By 2025-Oct-31, you need to update your project and remove deprecated calls 2025-09-24T13:26:24,986 or your builds will no longer be supported. 2025-09-24T13:26:24,987 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2025-09-24T13:26:24,988 ******************************************************************************** 2025-09-24T13:26:24,989 !! 2025-09-24T13:26:24,989 self.initialize_options() 2025-09-24T13:26:25,009 installing to build/bdist.linux-armv7l/wheel 2025-09-24T13:26:25,009 running install 2025-09-24T13:26:25,033 running install_lib 2025-09-24T13:26:25,060 creating build/bdist.linux-armv7l/wheel 2025-09-24T13:26:25,062 creating build/bdist.linux-armv7l/wheel/bpnet 2025-09-24T13:26:25,064 copying build/lib/bpnet/__init__.py -> build/bdist.linux-armv7l/wheel/./bpnet 2025-09-24T13:26:25,066 creating build/bdist.linux-armv7l/wheel/bpnet/generators 2025-09-24T13:26:25,067 copying build/lib/bpnet/generators/__init__.py -> build/bdist.linux-armv7l/wheel/./bpnet/generators 2025-09-24T13:26:25,069 copying build/lib/bpnet/generators/sequtils.py -> build/bdist.linux-armv7l/wheel/./bpnet/generators 2025-09-24T13:26:25,072 copying build/lib/bpnet/generators/generators.py -> build/bdist.linux-armv7l/wheel/./bpnet/generators 2025-09-24T13:26:25,076 creating build/bdist.linux-armv7l/wheel/bpnet/utils 2025-09-24T13:26:25,077 copying build/lib/bpnet/utils/__init__.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,079 copying build/lib/bpnet/utils/shaputils.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,081 copying build/lib/bpnet/utils/mean_shap.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,083 copying build/lib/bpnet/utils/exceptionhandler.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,085 copying build/lib/bpnet/utils/importance_hdf5_to_bigwig.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,087 copying build/lib/bpnet/utils/bigwig_helper.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,089 copying build/lib/bpnet/utils/logger.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,091 copying build/lib/bpnet/utils/misc.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,092 copying build/lib/bpnet/utils/counts_loss_weight.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,094 copying build/lib/bpnet/utils/datetime_custom.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,096 copying build/lib/bpnet/utils/mean_predictions.py -> build/bdist.linux-armv7l/wheel/./bpnet/utils 2025-09-24T13:26:25,099 creating build/bdist.linux-armv7l/wheel/bpnet/model 2025-09-24T13:26:25,100 copying build/lib/bpnet/model/__init__.py -> build/bdist.linux-armv7l/wheel/./bpnet/model 2025-09-24T13:26:25,102 copying build/lib/bpnet/model/custommodel.py -> build/bdist.linux-armv7l/wheel/./bpnet/model 2025-09-24T13:26:25,104 copying build/lib/bpnet/model/losses.py -> build/bdist.linux-armv7l/wheel/./bpnet/model 2025-09-24T13:26:25,106 copying build/lib/bpnet/model/bpnetdefaults.py -> build/bdist.linux-armv7l/wheel/./bpnet/model 2025-09-24T13:26:25,108 copying build/lib/bpnet/model/arch.py -> build/bdist.linux-armv7l/wheel/./bpnet/model 2025-09-24T13:26:25,111 creating build/bdist.linux-armv7l/wheel/bpnet/train 2025-09-24T13:26:25,113 copying build/lib/bpnet/train/__init__.py -> build/bdist.linux-armv7l/wheel/./bpnet/train 2025-09-24T13:26:25,114 copying build/lib/bpnet/train/training.py -> build/bdist.linux-armv7l/wheel/./bpnet/train 2025-09-24T13:26:25,118 creating build/bdist.linux-armv7l/wheel/bpnet/cli 2025-09-24T13:26:25,119 copying build/lib/bpnet/cli/shap_scores.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,122 copying build/lib/bpnet/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,124 copying build/lib/bpnet/cli/argparsers.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,126 copying build/lib/bpnet/cli/outliers.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,129 copying build/lib/bpnet/cli/predict.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,132 creating build/bdist.linux-armv7l/wheel/bpnet/cli/gc 2025-09-24T13:26:25,133 copying build/lib/bpnet/cli/gc/__init__.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli/gc 2025-09-24T13:26:25,135 copying build/lib/bpnet/cli/gc/get_gc_matched_negatives.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli/gc 2025-09-24T13:26:25,137 copying build/lib/bpnet/cli/gc/get_genomewide_gc_bins.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli/gc 2025-09-24T13:26:25,139 copying build/lib/bpnet/cli/gc/get_gc_background.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli/gc 2025-09-24T13:26:25,141 copying build/lib/bpnet/cli/gc/get_foreground_gc_content.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli/gc 2025-09-24T13:26:25,143 copying build/lib/bpnet/cli/bpnettrainer.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,145 copying build/lib/bpnet/cli/counts_loss_weight.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,148 copying build/lib/bpnet/cli/motif_discovery.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,150 copying build/lib/bpnet/cli/embeddings.py -> build/bdist.linux-armv7l/wheel/./bpnet/cli 2025-09-24T13:26:25,153 creating build/bdist.linux-armv7l/wheel/test 2025-09-24T13:26:25,154 copying build/lib/test/__init__.py -> build/bdist.linux-armv7l/wheel/./test 2025-09-24T13:26:25,156 copying build/lib/test/test_sequtils.py -> build/bdist.linux-armv7l/wheel/./test 2025-09-24T13:26:25,158 copying build/lib/test/test_generators.py -> build/bdist.linux-armv7l/wheel/./test 2025-09-24T13:26:25,160 running install_egg_info 2025-09-24T13:26:25,198 Copying bpnet.egg-info to build/bdist.linux-armv7l/wheel/./bpnet-2.0.0-py3.11.egg-info 2025-09-24T13:26:25,212 running install_scripts 2025-09-24T13:26:25,225 creating build/bdist.linux-armv7l/wheel/bpnet-2.0.0.dist-info/WHEEL 2025-09-24T13:26:25,227 creating '/tmp/pip-wheel-5apohsc6/bpnet-2.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-09-24T13:26:25,230 adding 'bpnet/__init__.py' 2025-09-24T13:26:25,231 adding 'bpnet/cli/__init__.py' 2025-09-24T13:26:25,234 adding 'bpnet/cli/argparsers.py' 2025-09-24T13:26:25,236 adding 'bpnet/cli/bpnettrainer.py' 2025-09-24T13:26:25,238 adding 'bpnet/cli/counts_loss_weight.py' 2025-09-24T13:26:25,240 adding 'bpnet/cli/embeddings.py' 2025-09-24T13:26:25,242 adding 'bpnet/cli/motif_discovery.py' 2025-09-24T13:26:25,244 adding 'bpnet/cli/outliers.py' 2025-09-24T13:26:25,248 adding 'bpnet/cli/predict.py' 2025-09-24T13:26:25,251 adding 'bpnet/cli/shap_scores.py' 2025-09-24T13:26:25,252 adding 'bpnet/cli/gc/__init__.py' 2025-09-24T13:26:25,253 adding 'bpnet/cli/gc/get_foreground_gc_content.py' 2025-09-24T13:26:25,255 adding 'bpnet/cli/gc/get_gc_background.py' 2025-09-24T13:26:25,256 adding 'bpnet/cli/gc/get_gc_matched_negatives.py' 2025-09-24T13:26:25,258 adding 'bpnet/cli/gc/get_genomewide_gc_bins.py' 2025-09-24T13:26:25,259 adding 'bpnet/generators/__init__.py' 2025-09-24T13:26:25,265 adding 'bpnet/generators/generators.py' 2025-09-24T13:26:25,268 adding 'bpnet/generators/sequtils.py' 2025-09-24T13:26:25,269 adding 'bpnet/model/__init__.py' 2025-09-24T13:26:25,273 adding 'bpnet/model/arch.py' 2025-09-24T13:26:25,274 adding 'bpnet/model/bpnetdefaults.py' 2025-09-24T13:26:25,276 adding 'bpnet/model/custommodel.py' 2025-09-24T13:26:25,277 adding 'bpnet/model/losses.py' 2025-09-24T13:26:25,278 adding 'bpnet/train/__init__.py' 2025-09-24T13:26:25,282 adding 'bpnet/train/training.py' 2025-09-24T13:26:25,283 adding 'bpnet/utils/__init__.py' 2025-09-24T13:26:25,285 adding 'bpnet/utils/bigwig_helper.py' 2025-09-24T13:26:25,286 adding 'bpnet/utils/counts_loss_weight.py' 2025-09-24T13:26:25,287 adding 'bpnet/utils/datetime_custom.py' 2025-09-24T13:26:25,289 adding 'bpnet/utils/exceptionhandler.py' 2025-09-24T13:26:25,290 adding 'bpnet/utils/importance_hdf5_to_bigwig.py' 2025-09-24T13:26:25,291 adding 'bpnet/utils/logger.py' 2025-09-24T13:26:25,293 adding 'bpnet/utils/mean_predictions.py' 2025-09-24T13:26:25,294 adding 'bpnet/utils/mean_shap.py' 2025-09-24T13:26:25,296 adding 'bpnet/utils/misc.py' 2025-09-24T13:26:25,297 adding 'bpnet/utils/shaputils.py' 2025-09-24T13:26:25,300 adding 'bpnet-2.0.0.dist-info/licenses/LICENSE' 2025-09-24T13:26:25,302 adding 'test/__init__.py' 2025-09-24T13:26:25,304 adding 'test/test_generators.py' 2025-09-24T13:26:25,305 adding 'test/test_sequtils.py' 2025-09-24T13:26:25,306 adding 'bpnet-2.0.0.dist-info/METADATA' 2025-09-24T13:26:25,307 adding 'bpnet-2.0.0.dist-info/WHEEL' 2025-09-24T13:26:25,308 adding 'bpnet-2.0.0.dist-info/entry_points.txt' 2025-09-24T13:26:25,309 adding 'bpnet-2.0.0.dist-info/top_level.txt' 2025-09-24T13:26:25,311 adding 'bpnet-2.0.0.dist-info/RECORD' 2025-09-24T13:26:25,313 removing build/bdist.linux-armv7l/wheel 2025-09-24T13:26:25,434 Building wheel for bpnet (setup.py): finished with status 'done' 2025-09-24T13:26:25,438 Created wheel for bpnet: filename=bpnet-2.0.0-py3-none-any.whl size=92880 sha256=23dd80d6ca130e8edaff34c7695873a36ebec4b4dee99dc32f5f4d0b715d47f2 2025-09-24T13:26:25,439 Stored in directory: /tmp/pip-ephem-wheel-cache-ydzk5ows/wheels/63/ef/68/e2eabee34ee15a9dbdcc93975387bccc378a690d21e6a7dbd6 2025-09-24T13:26:25,452 Successfully built bpnet 2025-09-24T13:26:25,457 Removed build tracker: '/tmp/pip-build-tracker-zfo40_sb'