2025-09-28T13:50:50,061 Created temporary directory: /tmp/pip-ephem-wheel-cache-sru7subn 2025-09-28T13:50:50,063 Created temporary directory: /tmp/pip-build-tracker-75w7y3cy 2025-09-28T13:50:50,064 Initialized build tracking at /tmp/pip-build-tracker-75w7y3cy 2025-09-28T13:50:50,064 Created build tracker: /tmp/pip-build-tracker-75w7y3cy 2025-09-28T13:50:50,065 Entered build tracker: /tmp/pip-build-tracker-75w7y3cy 2025-09-28T13:50:50,065 Created temporary directory: /tmp/pip-wheel-jcgnrcau 2025-09-28T13:50:50,069 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-09-28T13:50:50,071 Created temporary directory: /tmp/pip-ephem-wheel-cache-_0_qo1kv 2025-09-28T13:50:50,095 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-28T13:50:50,098 2 location(s) to search for versions of fhir-fast-parser: 2025-09-28T13:50:50,098 * https://pypi.org/simple/fhir-fast-parser/ 2025-09-28T13:50:50,098 * https://www.piwheels.org/simple/fhir-fast-parser/ 2025-09-28T13:50:50,099 Fetching project page and analyzing links: https://pypi.org/simple/fhir-fast-parser/ 2025-09-28T13:50:50,100 Getting page https://pypi.org/simple/fhir-fast-parser/ 2025-09-28T13:50:50,102 Found index url https://pypi.org/simple 2025-09-28T13:50:50,311 Fetched page https://pypi.org/simple/fhir-fast-parser/ as application/vnd.pypi.simple.v1+json 2025-09-28T13:50:50,312 Skipping link: No binaries permitted for fhir-fast-parser: https://files.pythonhosted.org/packages/89/9a/3a2b908f5f3b596c50d5cc791908a97040d6c4816a397a814f94296d8978/fhir_fast_parser-0.1.0-cp313-cp313-macosx_15_0_arm64.whl (from https://pypi.org/simple/fhir-fast-parser/) (requires-python:>=3.8) 2025-09-28T13:50:50,313 Found link https://files.pythonhosted.org/packages/25/60/00d92655b94de54e6060f8e40be3a9f04bdd4890f0a96637ad9e066fe346/fhir_fast_parser-0.1.0.tar.gz (from https://pypi.org/simple/fhir-fast-parser/) (requires-python:>=3.8), version: 0.1.0 2025-09-28T13:50:50,314 Fetching project page and analyzing links: https://www.piwheels.org/simple/fhir-fast-parser/ 2025-09-28T13:50:50,315 Getting page https://www.piwheels.org/simple/fhir-fast-parser/ 2025-09-28T13:50:50,316 Found index url https://www.piwheels.org/simple 2025-09-28T13:50:50,470 Fetched page https://www.piwheels.org/simple/fhir-fast-parser/ as text/html 2025-09-28T13:50:50,471 Skipping link: not a file: https://www.piwheels.org/simple/fhir-fast-parser/ 2025-09-28T13:50:50,472 Skipping link: not a file: https://pypi.org/simple/fhir-fast-parser/ 2025-09-28T13:50:50,491 Given no hashes to check 1 links for project 'fhir-fast-parser': discarding no candidates 2025-09-28T13:50:50,509 Collecting fhir-fast-parser==0.1.0 2025-09-28T13:50:50,511 Created temporary directory: /tmp/pip-unpack-bcqo6ny8 2025-09-28T13:50:50,645 Downloading fhir_fast_parser-0.1.0.tar.gz (220 kB) 2025-09-28T13:50:51,037 Added fhir-fast-parser==0.1.0 from https://files.pythonhosted.org/packages/25/60/00d92655b94de54e6060f8e40be3a9f04bdd4890f0a96637ad9e066fe346/fhir_fast_parser-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-75w7y3cy' 2025-09-28T13:50:51,044 Created temporary directory: /tmp/pip-build-env-ai_6ulei 2025-09-28T13:50:51,049 Installing build dependencies: started 2025-09-28T13:50:51,050 Running command pip subprocess to install build dependencies 2025-09-28T13:50:52,172 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-09-28T13:50:52,783 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-09-28T13:50:52,806 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-09-28T13:50:54,593 Collecting setuptools>=61.0 2025-09-28T13:50:54,698 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-09-28T13:50:55,185 Collecting wheel 2025-09-28T13:50:55,201 Using cached https://www.piwheels.org/simple/wheel/wheel-0.45.1-py3-none-any.whl (72 kB) 2025-09-28T13:50:58,239 Installing collected packages: wheel, setuptools 2025-09-28T13:50:58,483 Creating /tmp/pip-build-env-ai_6ulei/overlay/local/bin 2025-09-28T13:50:58,485 changing mode of /tmp/pip-build-env-ai_6ulei/overlay/local/bin/wheel to 755 2025-09-28T13:51:02,221 Successfully installed setuptools-80.9.0 wheel-0.45.1 2025-09-28T13:51:02,493 Installing build dependencies: finished with status 'done' 2025-09-28T13:51:02,500 Getting requirements to build wheel: started 2025-09-28T13:51:02,501 Running command Getting requirements to build wheel 2025-09-28T13:51:03,102 /tmp/pip-build-env-ai_6ulei/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-09-28T13:51:03,102 !! 2025-09-28T13:51:03,103 ******************************************************************************** 2025-09-28T13:51:03,104 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-09-28T13:51:03,105 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-09-28T13:51:03,106 or your builds will no longer be supported. 2025-09-28T13:51:03,107 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-28T13:51:03,107 ******************************************************************************** 2025-09-28T13:51:03,108 !! 2025-09-28T13:51:03,109 corresp(dist, value, root_dir) 2025-09-28T13:51:03,199 pkg-config not available or cJSON not found: No module named 'pkgconfig' 2025-09-28T13:51:03,199 Using fallback paths for cJSON 2025-09-28T13:51:03,200 Building with 3 C extensions 2025-09-28T13:51:03,200 running egg_info 2025-09-28T13:51:03,206 writing src/fhir_fast_parser.egg-info/PKG-INFO 2025-09-28T13:51:03,217 writing dependency_links to src/fhir_fast_parser.egg-info/dependency_links.txt 2025-09-28T13:51:03,224 writing requirements to src/fhir_fast_parser.egg-info/requires.txt 2025-09-28T13:51:03,226 writing top-level names to src/fhir_fast_parser.egg-info/top_level.txt 2025-09-28T13:51:03,261 reading manifest file 'src/fhir_fast_parser.egg-info/SOURCES.txt' 2025-09-28T13:51:03,275 reading manifest template 'MANIFEST.in' 2025-09-28T13:51:03,358 warning: no files found matching '*.json' under directory 'examples' 2025-09-28T13:51:03,359 adding license file 'LICENSE' 2025-09-28T13:51:03,369 writing manifest file 'src/fhir_fast_parser.egg-info/SOURCES.txt' 2025-09-28T13:51:03,467 Getting requirements to build wheel: finished with status 'done' 2025-09-28T13:51:03,470 Created temporary directory: /tmp/pip-modern-metadata-hovst3hd 2025-09-28T13:51:03,472 Preparing metadata (pyproject.toml): started 2025-09-28T13:51:03,473 Running command Preparing metadata (pyproject.toml) 2025-09-28T13:51:04,048 /tmp/pip-build-env-ai_6ulei/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-09-28T13:51:04,048 !! 2025-09-28T13:51:04,050 ******************************************************************************** 2025-09-28T13:51:04,050 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-09-28T13:51:04,052 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-09-28T13:51:04,052 or your builds will no longer be supported. 2025-09-28T13:51:04,053 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-28T13:51:04,054 ******************************************************************************** 2025-09-28T13:51:04,055 !! 2025-09-28T13:51:04,055 corresp(dist, value, root_dir) 2025-09-28T13:51:04,144 pkg-config not available or cJSON not found: No module named 'pkgconfig' 2025-09-28T13:51:04,144 Using fallback paths for cJSON 2025-09-28T13:51:04,145 Building with 3 C extensions 2025-09-28T13:51:04,146 running dist_info 2025-09-28T13:51:04,156 creating /tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser.egg-info 2025-09-28T13:51:04,157 writing /tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser.egg-info/PKG-INFO 2025-09-28T13:51:04,169 writing dependency_links to /tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser.egg-info/dependency_links.txt 2025-09-28T13:51:04,176 writing requirements to /tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser.egg-info/requires.txt 2025-09-28T13:51:04,177 writing top-level names to /tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser.egg-info/top_level.txt 2025-09-28T13:51:04,178 writing manifest file '/tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser.egg-info/SOURCES.txt' 2025-09-28T13:51:04,211 reading manifest file '/tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser.egg-info/SOURCES.txt' 2025-09-28T13:51:04,213 reading manifest template 'MANIFEST.in' 2025-09-28T13:51:04,299 warning: no files found matching '*.json' under directory 'examples' 2025-09-28T13:51:04,300 adding license file 'LICENSE' 2025-09-28T13:51:04,308 writing manifest file '/tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser.egg-info/SOURCES.txt' 2025-09-28T13:51:04,309 creating '/tmp/pip-modern-metadata-hovst3hd/fhir_fast_parser-0.1.0.dist-info' 2025-09-28T13:51:04,434 Preparing metadata (pyproject.toml): finished with status 'done' 2025-09-28T13:51:04,440 Source in /tmp/pip-wheel-jcgnrcau/fhir-fast-parser_56de1e8ef42b473eaa5622cd3cd4f529 has version 0.1.0, which satisfies requirement fhir-fast-parser==0.1.0 from https://files.pythonhosted.org/packages/25/60/00d92655b94de54e6060f8e40be3a9f04bdd4890f0a96637ad9e066fe346/fhir_fast_parser-0.1.0.tar.gz 2025-09-28T13:51:04,441 Removed fhir-fast-parser==0.1.0 from https://files.pythonhosted.org/packages/25/60/00d92655b94de54e6060f8e40be3a9f04bdd4890f0a96637ad9e066fe346/fhir_fast_parser-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-75w7y3cy' 2025-09-28T13:51:04,449 Created temporary directory: /tmp/pip-unpack-pyh4pfei 2025-09-28T13:51:04,450 Building wheels for collected packages: fhir-fast-parser 2025-09-28T13:51:04,455 Created temporary directory: /tmp/pip-wheel-wv7wwws1 2025-09-28T13:51:04,455 Destination directory: /tmp/pip-wheel-wv7wwws1 2025-09-28T13:51:04,458 Building wheel for fhir-fast-parser (pyproject.toml): started 2025-09-28T13:51:04,459 Running command Building wheel for fhir-fast-parser (pyproject.toml) 2025-09-28T13:51:05,016 /tmp/pip-build-env-ai_6ulei/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-09-28T13:51:05,016 !! 2025-09-28T13:51:05,017 ******************************************************************************** 2025-09-28T13:51:05,018 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-09-28T13:51:05,019 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-09-28T13:51:05,020 or your builds will no longer be supported. 2025-09-28T13:51:05,021 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-09-28T13:51:05,022 ******************************************************************************** 2025-09-28T13:51:05,023 !! 2025-09-28T13:51:05,023 corresp(dist, value, root_dir) 2025-09-28T13:51:05,097 pkg-config not available or cJSON not found: No module named 'pkgconfig' 2025-09-28T13:51:05,097 Using fallback paths for cJSON 2025-09-28T13:51:05,098 Building with 3 C extensions 2025-09-28T13:51:05,098 running bdist_wheel 2025-09-28T13:51:05,117 running build 2025-09-28T13:51:05,117 running build_py 2025-09-28T13:51:05,124 creating build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,127 copying src/fast_fhir/fhir_financial_c.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,129 copying src/fast_fhir/fhir_clinical_c.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,131 copying src/fast_fhir/all_resources.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,134 copying src/fast_fhir/fhir_medication_c.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,136 copying src/fast_fhir/terminology.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,138 copying src/fast_fhir/fhir_specialized_c.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,140 copying src/fast_fhir/foundation.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,142 copying src/fast_fhir/datatypes.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,145 copying src/fast_fhir/__init__.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,147 copying src/fast_fhir/fhir_datatypes_c.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,149 copying src/fast_fhir/fhir_parser_c.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,151 copying src/fast_fhir/fhir_foundation_c.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,153 copying src/fast_fhir/fast_parser.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,155 copying src/fast_fhir/fhir_workflow_c.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,157 copying src/fast_fhir/parser.py -> build/lib.linux-armv7l-cpython-311/fast_fhir 2025-09-28T13:51:05,160 creating build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,161 copying src/fast_fhir/resources/base.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,163 copying src/fast_fhir/resources/observation.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,166 copying src/fast_fhir/resources/service_request.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,168 copying src/fast_fhir/resources/risk_assessment.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,171 copying src/fast_fhir/resources/related_person.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,173 copying src/fast_fhir/resources/healthcare_service.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,175 copying src/fast_fhir/resources/list_resource.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,177 copying src/fast_fhir/resources/encounter_history.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,180 copying src/fast_fhir/resources/transport.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,182 copying src/fast_fhir/resources/slot.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,184 copying src/fast_fhir/resources/location.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,187 copying src/fast_fhir/resources/nutrition_order.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,189 copying src/fast_fhir/resources/encounter.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,191 copying src/fast_fhir/resources/task.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,194 copying src/fast_fhir/resources/flag.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,196 copying src/fast_fhir/resources/appointment_response.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,198 copying src/fast_fhir/resources/nutrition_product.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,200 copying src/fast_fhir/resources/device_metric.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,202 copying src/fast_fhir/resources/patient.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,204 copying src/fast_fhir/resources/verification_result.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,206 copying src/fast_fhir/resources/__init__.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,208 copying src/fast_fhir/resources/organization.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,210 copying src/fast_fhir/resources/appointment.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,212 copying src/fast_fhir/resources/device.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,214 copying src/fast_fhir/resources/group.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,216 copying src/fast_fhir/resources/practitioner.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,218 copying src/fast_fhir/resources/schedule.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,220 copying src/fast_fhir/resources/substance.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,222 copying src/fast_fhir/resources/endpoint.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,225 copying src/fast_fhir/resources/organization_affiliation.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,227 copying src/fast_fhir/resources/library.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,229 copying src/fast_fhir/resources/goal.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,231 copying src/fast_fhir/resources/care_plan.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,234 copying src/fast_fhir/resources/biologically_derived_product.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,236 copying src/fast_fhir/resources/vision_prescription.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,238 copying src/fast_fhir/resources/person.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,240 copying src/fast_fhir/resources/medication.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,242 copying src/fast_fhir/resources/episode_of_care.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,244 copying src/fast_fhir/resources/care_team.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,247 copying src/fast_fhir/resources/practitioner_role.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/resources 2025-09-28T13:51:05,249 creating build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,251 copying src/fast_fhir/deserializers/deserializers.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,254 copying src/fast_fhir/deserializers/pydantic_foundation.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,256 copying src/fast_fhir/deserializers/foundation_deserializers.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,259 copying src/fast_fhir/deserializers/pydantic_entities.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,262 copying src/fast_fhir/deserializers/__init__.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,264 copying src/fast_fhir/deserializers/pydantic_models.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,266 copying src/fast_fhir/deserializers/entities_deserializers.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,269 copying src/fast_fhir/deserializers/pydantic_care_provision.py -> build/lib.linux-armv7l-cpython-311/fast_fhir/deserializers 2025-09-28T13:51:05,271 running egg_info 2025-09-28T13:51:05,282 writing src/fhir_fast_parser.egg-info/PKG-INFO 2025-09-28T13:51:05,293 writing dependency_links to src/fhir_fast_parser.egg-info/dependency_links.txt 2025-09-28T13:51:05,299 writing requirements to src/fhir_fast_parser.egg-info/requires.txt 2025-09-28T13:51:05,300 writing top-level names to src/fhir_fast_parser.egg-info/top_level.txt 2025-09-28T13:51:05,317 reading manifest file 'src/fhir_fast_parser.egg-info/SOURCES.txt' 2025-09-28T13:51:05,326 reading manifest template 'MANIFEST.in' 2025-09-28T13:51:05,411 warning: no files found matching '*.json' under directory 'examples' 2025-09-28T13:51:05,412 adding license file 'LICENSE' 2025-09-28T13:51:05,422 writing manifest file 'src/fhir_fast_parser.egg-info/SOURCES.txt' 2025-09-28T13:51:05,425 /tmp/pip-build-env-ai_6ulei/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'fast_fhir.ext' is absent from the `packages` configuration. 2025-09-28T13:51:05,425 !! 2025-09-28T13:51:05,426 ******************************************************************************** 2025-09-28T13:51:05,427 ############################ 2025-09-28T13:51:05,428 # Package would be ignored # 2025-09-28T13:51:05,428 ############################ 2025-09-28T13:51:05,429 Python recognizes 'fast_fhir.ext' as an importable package[^1], 2025-09-28T13:51:05,430 but it is absent from setuptools' `packages` configuration. 2025-09-28T13:51:05,431 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-28T13:51:05,431 package, please make sure that 'fast_fhir.ext' is explicitly added 2025-09-28T13:51:05,432 to the `packages` configuration field. 2025-09-28T13:51:05,433 Alternatively, you can also rely on setuptools' discovery methods 2025-09-28T13:51:05,434 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-28T13:51:05,434 instead of `find_packages(...)`/`find:`). 2025-09-28T13:51:05,436 You can read more about "package discovery" on setuptools documentation page: 2025-09-28T13:51:05,437 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-28T13:51:05,438 If you don't want 'fast_fhir.ext' to be distributed and are 2025-09-28T13:51:05,438 already explicitly excluding 'fast_fhir.ext' via 2025-09-28T13:51:05,439 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-28T13:51:05,439 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-28T13:51:05,440 combination with a more fine grained `package-data` configuration. 2025-09-28T13:51:05,441 You can read more about "package data files" on setuptools documentation page: 2025-09-28T13:51:05,442 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-28T13:51:05,444 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-28T13:51:05,444 even if it does not contain any `.py` files. 2025-09-28T13:51:05,445 On the other hand, currently there is no concept of package data 2025-09-28T13:51:05,446 directory, all directories are treated like packages. 2025-09-28T13:51:05,446 ******************************************************************************** 2025-09-28T13:51:05,447 !! 2025-09-28T13:51:05,447 check.warn(importable) 2025-09-28T13:51:05,448 /tmp/pip-build-env-ai_6ulei/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'fast_fhir.ext.common' is absent from the `packages` configuration. 2025-09-28T13:51:05,448 !! 2025-09-28T13:51:05,449 ******************************************************************************** 2025-09-28T13:51:05,449 ############################ 2025-09-28T13:51:05,450 # Package would be ignored # 2025-09-28T13:51:05,451 ############################ 2025-09-28T13:51:05,451 Python recognizes 'fast_fhir.ext.common' as an importable package[^1], 2025-09-28T13:51:05,451 but it is absent from setuptools' `packages` configuration. 2025-09-28T13:51:05,452 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-28T13:51:05,453 package, please make sure that 'fast_fhir.ext.common' is explicitly added 2025-09-28T13:51:05,453 to the `packages` configuration field. 2025-09-28T13:51:05,454 Alternatively, you can also rely on setuptools' discovery methods 2025-09-28T13:51:05,455 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-28T13:51:05,455 instead of `find_packages(...)`/`find:`). 2025-09-28T13:51:05,456 You can read more about "package discovery" on setuptools documentation page: 2025-09-28T13:51:05,457 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-28T13:51:05,458 If you don't want 'fast_fhir.ext.common' to be distributed and are 2025-09-28T13:51:05,459 already explicitly excluding 'fast_fhir.ext.common' via 2025-09-28T13:51:05,459 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-28T13:51:05,460 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-28T13:51:05,460 combination with a more fine grained `package-data` configuration. 2025-09-28T13:51:05,461 You can read more about "package data files" on setuptools documentation page: 2025-09-28T13:51:05,462 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-28T13:51:05,464 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-28T13:51:05,464 even if it does not contain any `.py` files. 2025-09-28T13:51:05,465 On the other hand, currently there is no concept of package data 2025-09-28T13:51:05,465 directory, all directories are treated like packages. 2025-09-28T13:51:05,466 ******************************************************************************** 2025-09-28T13:51:05,467 !! 2025-09-28T13:51:05,467 check.warn(importable) 2025-09-28T13:51:05,468 /tmp/pip-build-env-ai_6ulei/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'fast_fhir.ext.resources' is absent from the `packages` configuration. 2025-09-28T13:51:05,468 !! 2025-09-28T13:51:05,469 ******************************************************************************** 2025-09-28T13:51:05,470 ############################ 2025-09-28T13:51:05,470 # Package would be ignored # 2025-09-28T13:51:05,471 ############################ 2025-09-28T13:51:05,471 Python recognizes 'fast_fhir.ext.resources' as an importable package[^1], 2025-09-28T13:51:05,472 but it is absent from setuptools' `packages` configuration. 2025-09-28T13:51:05,473 This leads to an ambiguous overall configuration. If you want to distribute this 2025-09-28T13:51:05,474 package, please make sure that 'fast_fhir.ext.resources' is explicitly added 2025-09-28T13:51:05,474 to the `packages` configuration field. 2025-09-28T13:51:05,475 Alternatively, you can also rely on setuptools' discovery methods 2025-09-28T13:51:05,475 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2025-09-28T13:51:05,476 instead of `find_packages(...)`/`find:`). 2025-09-28T13:51:05,477 You can read more about "package discovery" on setuptools documentation page: 2025-09-28T13:51:05,478 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2025-09-28T13:51:05,479 If you don't want 'fast_fhir.ext.resources' to be distributed and are 2025-09-28T13:51:05,479 already explicitly excluding 'fast_fhir.ext.resources' via 2025-09-28T13:51:05,479 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2025-09-28T13:51:05,480 you can try to use `exclude_package_data`, or `include-package-data=False` in 2025-09-28T13:51:05,480 combination with a more fine grained `package-data` configuration. 2025-09-28T13:51:05,481 You can read more about "package data files" on setuptools documentation page: 2025-09-28T13:51:05,482 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2025-09-28T13:51:05,484 [^1]: For Python, any directory (with suitable naming) can be imported, 2025-09-28T13:51:05,484 even if it does not contain any `.py` files. 2025-09-28T13:51:05,484 On the other hand, currently there is no concept of package data 2025-09-28T13:51:05,485 directory, all directories are treated like packages. 2025-09-28T13:51:05,485 ******************************************************************************** 2025-09-28T13:51:05,486 !! 2025-09-28T13:51:05,487 check.warn(importable) 2025-09-28T13:51:05,487 creating build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,488 copying src/fast_fhir/ext/fhir_all_resources.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,488 copying src/fast_fhir/ext/fhir_clinical.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,489 copying src/fast_fhir/ext/fhir_datatypes.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,489 copying src/fast_fhir/ext/fhir_datatypes.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,490 copying src/fast_fhir/ext/fhir_datatypes_python.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,491 copying src/fast_fhir/ext/fhir_financial.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,491 copying src/fast_fhir/ext/fhir_foundation.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,492 copying src/fast_fhir/ext/fhir_foundation.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,492 copying src/fast_fhir/ext/fhir_foundation_python.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,493 copying src/fast_fhir/ext/fhir_medication.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,493 copying src/fast_fhir/ext/fhir_new_resources.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,494 copying src/fast_fhir/ext/fhir_new_resources_python.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,494 copying src/fast_fhir/ext/fhir_parser.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,495 copying src/fast_fhir/ext/fhir_specialized.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,495 copying src/fast_fhir/ext/fhir_workflow.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext 2025-09-28T13:51:05,496 creating build/lib.linux-armv7l-cpython-311/fast_fhir/ext/common 2025-09-28T13:51:05,496 copying src/fast_fhir/ext/common/fhir_common.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/common 2025-09-28T13:51:05,497 copying src/fast_fhir/ext/common/fhir_common.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/common 2025-09-28T13:51:05,500 copying src/fast_fhir/ext/common/fhir_resource_base.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/common 2025-09-28T13:51:05,503 copying src/fast_fhir/ext/common/fhir_resource_base.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/common 2025-09-28T13:51:05,506 creating build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,507 copying src/fast_fhir/ext/resources/fhir_biologically_derived_product.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,509 copying src/fast_fhir/ext/resources/fhir_careplan.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,512 copying src/fast_fhir/ext/resources/fhir_careplan.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,515 copying src/fast_fhir/ext/resources/fhir_careteam.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,517 copying src/fast_fhir/ext/resources/fhir_device_metric.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,520 copying src/fast_fhir/ext/resources/fhir_device_metric.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,523 copying src/fast_fhir/ext/resources/fhir_encounter.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,526 copying src/fast_fhir/ext/resources/fhir_encounter.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,529 copying src/fast_fhir/ext/resources/fhir_goal.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,531 copying src/fast_fhir/ext/resources/fhir_location.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,534 copying src/fast_fhir/ext/resources/fhir_location.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,537 copying src/fast_fhir/ext/resources/fhir_nutritionorder.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,539 copying src/fast_fhir/ext/resources/fhir_observation.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,542 copying src/fast_fhir/ext/resources/fhir_observation.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,545 copying src/fast_fhir/ext/resources/fhir_organization.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,548 copying src/fast_fhir/ext/resources/fhir_organization.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,550 copying src/fast_fhir/ext/resources/fhir_organization_affiliation.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,553 copying src/fast_fhir/ext/resources/fhir_organization_affiliation.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,555 copying src/fast_fhir/ext/resources/fhir_patient.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,559 copying src/fast_fhir/ext/resources/fhir_patient.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,561 copying src/fast_fhir/ext/resources/fhir_practitioner.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,564 copying src/fast_fhir/ext/resources/fhir_practitioner.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,567 copying src/fast_fhir/ext/resources/fhir_practitionerrole.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,569 copying src/fast_fhir/ext/resources/fhir_practitionerrole.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,572 copying src/fast_fhir/ext/resources/fhir_riskassessment.c -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,575 copying src/fast_fhir/ext/resources/fhir_riskassessment.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,578 copying src/fast_fhir/ext/resources/fhir_servicerequest.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,580 copying src/fast_fhir/ext/resources/fhir_visionprescription.h -> build/lib.linux-armv7l-cpython-311/fast_fhir/ext/resources 2025-09-28T13:51:05,586 running build_ext 2025-09-28T13:51:05,593 building 'fast_fhir.fhir_parser_c' extension 2025-09-28T13:51:05,594 creating build/temp.linux-armv7l-cpython-311/src/fast_fhir/ext 2025-09-28T13:51:05,596 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/include -I/usr/include/python3.11 -c src/fast_fhir/ext/fhir_parser.c -o build/temp.linux-armv7l-cpython-311/src/fast_fhir/ext/fhir_parser.o -O3 -std=c99 2025-09-28T13:51:06,082 src/fast_fhir/ext/fhir_parser.c:4:10: fatal error: cjson/cJSON.h: No such file or directory 2025-09-28T13:51:06,082 4 | #include 2025-09-28T13:51:06,083 | ^~~~~~~~~~~~~~~ 2025-09-28T13:51:06,083 compilation terminated. 2025-09-28T13:51:06,088 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2025-09-28T13:51:06,185 ERROR: [present-rich] Building wheel for fhir-fast-parser (pyproject.toml) exited with 1 2025-09-28T13:51:06,198 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/lib/python3/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmp5u7x6y5y[/] 2025-09-28T13:51:06,199 [bold magenta]cwd[/]: /tmp/pip-wheel-jcgnrcau/fhir-fast-parser_56de1e8ef42b473eaa5622cd3cd4f529 2025-09-28T13:51:06,199 Building wheel for fhir-fast-parser (pyproject.toml): finished with status 'error' 2025-09-28T13:51:06,201 ERROR: Failed building wheel for fhir-fast-parser 2025-09-28T13:51:06,204 Failed to build fhir-fast-parser 2025-09-28T13:51:06,205 ERROR: Failed to build one or more wheels 2025-09-28T13:51:06,206 Exception information: 2025-09-28T13:51:06,206 Traceback (most recent call last): 2025-09-28T13:51:06,206 File "/usr/lib/python3/dist-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper 2025-09-28T13:51:06,206 status = run_func(*args) 2025-09-28T13:51:06,206 ^^^^^^^^^^^^^^^ 2025-09-28T13:51:06,206 File "/usr/lib/python3/dist-packages/pip/_internal/cli/req_command.py", line 247, in wrapper 2025-09-28T13:51:06,206 return func(self, options, args) 2025-09-28T13:51:06,206 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2025-09-28T13:51:06,206 File "/usr/lib/python3/dist-packages/pip/_internal/commands/wheel.py", line 201, in run 2025-09-28T13:51:06,206 raise CommandError("Failed to build one or more wheels") 2025-09-28T13:51:06,206 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2025-09-28T13:51:06,210 Removed build tracker: '/tmp/pip-build-tracker-75w7y3cy'