2025-10-03T14:20:54,412 Created temporary directory: /tmp/pip-ephem-wheel-cache-eckj620x
2025-10-03T14:20:54,418 Created temporary directory: /tmp/pip-build-tracker-ofiat3t_
2025-10-03T14:20:54,419 Initialized build tracking at /tmp/pip-build-tracker-ofiat3t_
2025-10-03T14:20:54,421 Created build tracker: /tmp/pip-build-tracker-ofiat3t_
2025-10-03T14:20:54,422 Entered build tracker: /tmp/pip-build-tracker-ofiat3t_
2025-10-03T14:20:54,425 Created temporary directory: /tmp/pip-wheel-5vmvwwp9
2025-10-03T14:20:54,428 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-10-03T14:20:54,432 Created temporary directory: /tmp/pip-ephem-wheel-cache-tos_wywv
2025-10-03T14:20:54,481 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-10-03T14:20:54,485 2 location(s) to search for versions of finemo:
2025-10-03T14:20:54,485 * https://pypi.org/simple/finemo/
2025-10-03T14:20:54,485 * https://www.piwheels.org/simple/finemo/
2025-10-03T14:20:54,485 Fetching project page and analyzing links: https://pypi.org/simple/finemo/
2025-10-03T14:20:54,486 Getting page https://pypi.org/simple/finemo/
2025-10-03T14:20:54,488 Found index url https://pypi.org/simple
2025-10-03T14:20:54,704 Fetched page https://pypi.org/simple/finemo/ as application/vnd.pypi.simple.v1+json
2025-10-03T14:20:54,706   Skipping link: No binaries permitted for finemo: https://files.pythonhosted.org/packages/76/54/8c84fe23f26b1161eb8a7e6a1a70ab3412f15780d2ddf05dfb5b75d76d2a/finemo-0.40-py3-none-any.whl (from https://pypi.org/simple/finemo/)
2025-10-03T14:20:54,707   Found link https://files.pythonhosted.org/packages/e2/96/cbc16176871e3006b2e963d62c46619dd7ac6708a8c6458045c86dcfcf69/finemo-0.40.tar.gz (from https://pypi.org/simple/finemo/), version: 0.40
2025-10-03T14:20:54,707   Skipping link: No binaries permitted for finemo: https://files.pythonhosted.org/packages/eb/a6/bb0c4ee46b6db6c13e457904eda7068f21f8e23fc23f9a6c5aadd36b0b0b/finemo-0.41-py3-none-any.whl (from https://pypi.org/simple/finemo/)
2025-10-03T14:20:54,708   Found link https://files.pythonhosted.org/packages/dc/a1/d0eaf4e2530ecc9018d6d901a5903db22ef16bf00bc7a91e3f768c16501d/finemo-0.41.tar.gz (from https://pypi.org/simple/finemo/), version: 0.41
2025-10-03T14:20:54,709 Fetching project page and analyzing links: https://www.piwheels.org/simple/finemo/
2025-10-03T14:20:54,709 Getting page https://www.piwheels.org/simple/finemo/
2025-10-03T14:20:54,710 Found index url https://www.piwheels.org/simple
2025-10-03T14:20:55,105 Fetched page https://www.piwheels.org/simple/finemo/ as text/html
2025-10-03T14:20:55,107   Skipping link: No binaries permitted for finemo: https://www.piwheels.org/simple/finemo/finemo-0.40-py3-none-any.whl#sha256=39ec047264306920b12e47f55ca8843ae9e3d7bfa50a2666f19f662f3280586e (from https://www.piwheels.org/simple/finemo/)
2025-10-03T14:20:55,108 Skipping link: not a file: https://www.piwheels.org/simple/finemo/
2025-10-03T14:20:55,110 Skipping link: not a file: https://pypi.org/simple/finemo/
2025-10-03T14:20:55,133 Given no hashes to check 1 links for project 'finemo': discarding no candidates
2025-10-03T14:20:55,155 Collecting finemo==0.41
2025-10-03T14:20:55,163   Created temporary directory: /tmp/pip-unpack-lis8yht1
2025-10-03T14:20:55,384   Downloading finemo-0.41.tar.gz (85 kB)
2025-10-03T14:20:55,835   Added finemo==0.41 from https://files.pythonhosted.org/packages/dc/a1/d0eaf4e2530ecc9018d6d901a5903db22ef16bf00bc7a91e3f768c16501d/finemo-0.41.tar.gz to build tracker '/tmp/pip-build-tracker-ofiat3t_'
2025-10-03T14:20:55,844   Created temporary directory: /tmp/pip-build-env-d4kat33d
2025-10-03T14:20:55,857   Installing build dependencies: started
2025-10-03T14:20:55,861   Running command pip subprocess to install build dependencies
2025-10-03T14:20:57,045   Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11)
2025-10-03T14:20:57,616   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2025-10-03T14:20:57,639   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2025-10-03T14:20:59,347   Collecting setuptools
2025-10-03T14:20:59,459     Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB)
2025-10-03T14:20:59,832   Collecting setuptools-scm
2025-10-03T14:20:59,848     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-9.2.0-py3-none-any.whl (62 kB)
2025-10-03T14:21:00,035   Collecting packaging>=20
2025-10-03T14:21:00,054     Using cached https://www.piwheels.org/simple/packaging/packaging-25.0-py3-none-any.whl (66 kB)
2025-10-03T14:21:03,115   Installing collected packages: setuptools, packaging, setuptools-scm
2025-10-03T14:21:07,330     Creating /tmp/pip-build-env-d4kat33d/overlay/local/bin
2025-10-03T14:21:07,332     changing mode of /tmp/pip-build-env-d4kat33d/overlay/local/bin/setuptools-scm to 755
2025-10-03T14:21:07,384   Successfully installed packaging-25.0 setuptools-80.9.0 setuptools-scm-9.2.0
2025-10-03T14:21:07,679   Installing build dependencies: finished with status 'done'
2025-10-03T14:21:07,704   Getting requirements to build wheel: started
2025-10-03T14:21:07,707   Running command Getting requirements to build wheel
2025-10-03T14:21:08,408   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2025-10-03T14:21:08,438   /tmp/pip-build-env-d4kat33d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-10-03T14:21:08,439   !!

2025-10-03T14:21:08,440           ********************************************************************************
2025-10-03T14:21:08,441           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-10-03T14:21:08,442           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-10-03T14:21:08,443           or your builds will no longer be supported.

2025-10-03T14:21:08,444           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-10-03T14:21:08,445           ********************************************************************************

2025-10-03T14:21:08,446   !!
2025-10-03T14:21:08,446     corresp(dist, value, root_dir)
2025-10-03T14:21:08,539   running egg_info
2025-10-03T14:21:08,548   writing src/finemo.egg-info/PKG-INFO
2025-10-03T14:21:08,552   writing dependency_links to src/finemo.egg-info/dependency_links.txt
2025-10-03T14:21:08,554   writing entry points to src/finemo.egg-info/entry_points.txt
2025-10-03T14:21:08,556   writing requirements to src/finemo.egg-info/requires.txt
2025-10-03T14:21:08,557   writing top-level names to src/finemo.egg-info/top_level.txt
2025-10-03T14:21:08,608   listing git files failed - pretending there aren't any
2025-10-03T14:21:08,616   reading manifest file 'src/finemo.egg-info/SOURCES.txt'
2025-10-03T14:21:08,620   adding license file 'LICENSE'
2025-10-03T14:21:08,623   writing manifest file 'src/finemo.egg-info/SOURCES.txt'
2025-10-03T14:21:08,729   Getting requirements to build wheel: finished with status 'done'
2025-10-03T14:21:08,732   Created temporary directory: /tmp/pip-modern-metadata-ir8bv5vu
2025-10-03T14:21:08,735   Preparing metadata (pyproject.toml): started
2025-10-03T14:21:08,736   Running command Preparing metadata (pyproject.toml)
2025-10-03T14:21:09,335   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2025-10-03T14:21:09,361   /tmp/pip-build-env-d4kat33d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-10-03T14:21:09,361   !!

2025-10-03T14:21:09,362           ********************************************************************************
2025-10-03T14:21:09,363           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-10-03T14:21:09,364           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-10-03T14:21:09,364           or your builds will no longer be supported.

2025-10-03T14:21:09,365           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-10-03T14:21:09,365           ********************************************************************************

2025-10-03T14:21:09,366   !!
2025-10-03T14:21:09,367     corresp(dist, value, root_dir)
2025-10-03T14:21:09,458   running dist_info
2025-10-03T14:21:09,473   creating /tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info
2025-10-03T14:21:09,474   writing /tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info/PKG-INFO
2025-10-03T14:21:09,478   writing dependency_links to /tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info/dependency_links.txt
2025-10-03T14:21:09,480   writing entry points to /tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info/entry_points.txt
2025-10-03T14:21:09,482   writing requirements to /tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info/requires.txt
2025-10-03T14:21:09,483   writing top-level names to /tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info/top_level.txt
2025-10-03T14:21:09,484   writing manifest file '/tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info/SOURCES.txt'
2025-10-03T14:21:09,530   listing git files failed - pretending there aren't any
2025-10-03T14:21:09,537   reading manifest file '/tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info/SOURCES.txt'
2025-10-03T14:21:09,539   adding license file 'LICENSE'
2025-10-03T14:21:09,542   writing manifest file '/tmp/pip-modern-metadata-ir8bv5vu/finemo.egg-info/SOURCES.txt'
2025-10-03T14:21:09,543   creating '/tmp/pip-modern-metadata-ir8bv5vu/finemo-0.41.dist-info'
2025-10-03T14:21:09,674   Preparing metadata (pyproject.toml): finished with status 'done'
2025-10-03T14:21:09,680   Source in /tmp/pip-wheel-5vmvwwp9/finemo_1707d6fec91847ea868e476c8f1b892b has version 0.41, which satisfies requirement finemo==0.41 from https://files.pythonhosted.org/packages/dc/a1/d0eaf4e2530ecc9018d6d901a5903db22ef16bf00bc7a91e3f768c16501d/finemo-0.41.tar.gz
2025-10-03T14:21:09,681   Removed finemo==0.41 from https://files.pythonhosted.org/packages/dc/a1/d0eaf4e2530ecc9018d6d901a5903db22ef16bf00bc7a91e3f768c16501d/finemo-0.41.tar.gz from build tracker '/tmp/pip-build-tracker-ofiat3t_'
2025-10-03T14:21:09,687 Created temporary directory: /tmp/pip-unpack-nj_4hjj3
2025-10-03T14:21:09,688 Building wheels for collected packages: finemo
2025-10-03T14:21:09,692   Created temporary directory: /tmp/pip-wheel-d3244h1f
2025-10-03T14:21:09,693   Destination directory: /tmp/pip-wheel-d3244h1f
2025-10-03T14:21:09,695   Building wheel for finemo (pyproject.toml): started
2025-10-03T14:21:09,696   Running command Building wheel for finemo (pyproject.toml)
2025-10-03T14:21:10,279   toml section missing PosixPath('pyproject.toml') does not contain a tool.setuptools_scm section
2025-10-03T14:21:10,304   /tmp/pip-build-env-d4kat33d/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated
2025-10-03T14:21:10,305   !!

2025-10-03T14:21:10,306           ********************************************************************************
2025-10-03T14:21:10,307           Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0).

2025-10-03T14:21:10,308           By 2026-Feb-18, you need to update your project and remove deprecated calls
2025-10-03T14:21:10,308           or your builds will no longer be supported.

2025-10-03T14:21:10,309           See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
2025-10-03T14:21:10,310           ********************************************************************************

2025-10-03T14:21:10,310   !!
2025-10-03T14:21:10,311     corresp(dist, value, root_dir)
2025-10-03T14:21:10,387   running bdist_wheel
2025-10-03T14:21:10,412   running build
2025-10-03T14:21:10,413   running build_py
2025-10-03T14:21:10,420   creating build/lib/finemo
2025-10-03T14:21:10,422   copying src/finemo/hitcaller.py -> build/lib/finemo
2025-10-03T14:21:10,425   copying src/finemo/postprocessing.py -> build/lib/finemo
2025-10-03T14:21:10,428   copying src/finemo/main.py -> build/lib/finemo
2025-10-03T14:21:10,430   copying src/finemo/__init__.py -> build/lib/finemo
2025-10-03T14:21:10,432   copying src/finemo/data_io.py -> build/lib/finemo
2025-10-03T14:21:10,435   copying src/finemo/visualization.py -> build/lib/finemo
2025-10-03T14:21:10,438   copying src/finemo/__main__.py -> build/lib/finemo
2025-10-03T14:21:10,440   copying src/finemo/evaluation.py -> build/lib/finemo
2025-10-03T14:21:10,443   creating build/lib/finemo/templates
2025-10-03T14:21:10,443   copying src/finemo/templates/__init__.py -> build/lib/finemo/templates
2025-10-03T14:21:10,445   running egg_info
2025-10-03T14:21:10,458   writing src/finemo.egg-info/PKG-INFO
2025-10-03T14:21:10,462   writing dependency_links to src/finemo.egg-info/dependency_links.txt
2025-10-03T14:21:10,463   writing entry points to src/finemo.egg-info/entry_points.txt
2025-10-03T14:21:10,465   writing requirements to src/finemo.egg-info/requires.txt
2025-10-03T14:21:10,466   writing top-level names to src/finemo.egg-info/top_level.txt
2025-10-03T14:21:10,499   listing git files failed - pretending there aren't any
2025-10-03T14:21:10,505   reading manifest file 'src/finemo.egg-info/SOURCES.txt'
2025-10-03T14:21:10,509   adding license file 'LICENSE'
2025-10-03T14:21:10,512   writing manifest file 'src/finemo.egg-info/SOURCES.txt'
2025-10-03T14:21:10,515   copying src/finemo/templates/report.html -> build/lib/finemo/templates
2025-10-03T14:21:10,532   installing to build/bdist.linux-armv7l/wheel
2025-10-03T14:21:10,532   running install
2025-10-03T14:21:10,555   running install_lib
2025-10-03T14:21:10,563   creating build/bdist.linux-armv7l/wheel
2025-10-03T14:21:10,565   creating build/bdist.linux-armv7l/wheel/finemo
2025-10-03T14:21:10,566   copying build/lib/finemo/hitcaller.py -> build/bdist.linux-armv7l/wheel/./finemo
2025-10-03T14:21:10,569   copying build/lib/finemo/postprocessing.py -> build/bdist.linux-armv7l/wheel/./finemo
2025-10-03T14:21:10,571   copying build/lib/finemo/main.py -> build/bdist.linux-armv7l/wheel/./finemo
2025-10-03T14:21:10,575   creating build/bdist.linux-armv7l/wheel/finemo/templates
2025-10-03T14:21:10,576   copying build/lib/finemo/templates/__init__.py -> build/bdist.linux-armv7l/wheel/./finemo/templates
2025-10-03T14:21:10,577   copying build/lib/finemo/templates/report.html -> build/bdist.linux-armv7l/wheel/./finemo/templates
2025-10-03T14:21:10,580   copying build/lib/finemo/__init__.py -> build/bdist.linux-armv7l/wheel/./finemo
2025-10-03T14:21:10,582   copying build/lib/finemo/data_io.py -> build/bdist.linux-armv7l/wheel/./finemo
2025-10-03T14:21:10,584   copying build/lib/finemo/visualization.py -> build/bdist.linux-armv7l/wheel/./finemo
2025-10-03T14:21:10,587   copying build/lib/finemo/__main__.py -> build/bdist.linux-armv7l/wheel/./finemo
2025-10-03T14:21:10,589   copying build/lib/finemo/evaluation.py -> build/bdist.linux-armv7l/wheel/./finemo
2025-10-03T14:21:10,591   running install_egg_info
2025-10-03T14:21:10,598   Copying src/finemo.egg-info to build/bdist.linux-armv7l/wheel/./finemo-0.41-py3.11.egg-info
2025-10-03T14:21:10,610   running install_scripts
2025-10-03T14:21:10,621   creating build/bdist.linux-armv7l/wheel/finemo-0.41.dist-info/WHEEL
2025-10-03T14:21:10,624   creating '/tmp/pip-wheel-d3244h1f/.tmp-71eaklt2/finemo-0.41-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2025-10-03T14:21:10,626   adding 'finemo/__init__.py'
2025-10-03T14:21:10,627   adding 'finemo/__main__.py'
2025-10-03T14:21:10,633   adding 'finemo/data_io.py'
2025-10-03T14:21:10,636   adding 'finemo/evaluation.py'
2025-10-03T14:21:10,640   adding 'finemo/hitcaller.py'
2025-10-03T14:21:10,644   adding 'finemo/main.py'
2025-10-03T14:21:10,647   adding 'finemo/postprocessing.py'
2025-10-03T14:21:10,650   adding 'finemo/visualization.py'
2025-10-03T14:21:10,652   adding 'finemo/templates/__init__.py'
2025-10-03T14:21:10,654   adding 'finemo/templates/report.html'
2025-10-03T14:21:10,657   adding 'finemo-0.41.dist-info/licenses/LICENSE'
2025-10-03T14:21:10,659   adding 'finemo-0.41.dist-info/METADATA'
2025-10-03T14:21:10,660   adding 'finemo-0.41.dist-info/WHEEL'
2025-10-03T14:21:10,661   adding 'finemo-0.41.dist-info/entry_points.txt'
2025-10-03T14:21:10,662   adding 'finemo-0.41.dist-info/top_level.txt'
2025-10-03T14:21:10,663   adding 'finemo-0.41.dist-info/RECORD'
2025-10-03T14:21:10,665   removing build/bdist.linux-armv7l/wheel
2025-10-03T14:21:10,773   Building wheel for finemo (pyproject.toml): finished with status 'done'
2025-10-03T14:21:10,779   Created wheel for finemo: filename=finemo-0.41-py3-none-any.whl size=58612 sha256=20424fdb6b80792a62cfb37d25cbccd3b8d38f085e163506dbf9e73bf354946c
2025-10-03T14:21:10,780   Stored in directory: /tmp/pip-ephem-wheel-cache-tos_wywv/wheels/05/be/e4/04b5702bfee1afc30df6fd02e4ce4980461213fd47c4ba7afc
2025-10-03T14:21:10,793 Successfully built finemo
2025-10-03T14:21:10,798 Removed build tracker: '/tmp/pip-build-tracker-ofiat3t_'