2025-10-10T06:02:15,786 Created temporary directory: /tmp/pip-ephem-wheel-cache-9v_zjdju 2025-10-10T06:02:15,788 Created temporary directory: /tmp/pip-build-tracker-6thkycqn 2025-10-10T06:02:15,789 Initialized build tracking at /tmp/pip-build-tracker-6thkycqn 2025-10-10T06:02:15,789 Created build tracker: /tmp/pip-build-tracker-6thkycqn 2025-10-10T06:02:15,790 Entered build tracker: /tmp/pip-build-tracker-6thkycqn 2025-10-10T06:02:15,791 Created temporary directory: /tmp/pip-wheel-peda1ur5 2025-10-10T06:02:15,795 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-10-10T06:02:15,797 Created temporary directory: /tmp/pip-ephem-wheel-cache-ckynwmj7 2025-10-10T06:02:15,821 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-10T06:02:15,825 2 location(s) to search for versions of pytom-match-pick: 2025-10-10T06:02:15,825 * https://pypi.org/simple/pytom-match-pick/ 2025-10-10T06:02:15,825 * https://www.piwheels.org/simple/pytom-match-pick/ 2025-10-10T06:02:15,826 Fetching project page and analyzing links: https://pypi.org/simple/pytom-match-pick/ 2025-10-10T06:02:15,827 Getting page https://pypi.org/simple/pytom-match-pick/ 2025-10-10T06:02:15,828 Found index url https://pypi.org/simple 2025-10-10T06:02:16,060 Fetched page https://pypi.org/simple/pytom-match-pick/ as application/vnd.pypi.simple.v1+json 2025-10-10T06:02:16,068 Found link https://files.pythonhosted.org/packages/0b/50/a6e8fdbb4f4be7d7279346ce8fb6bf21d49cff13ea2d715e11b3d24def87/pytom-match-pick-0.4.3.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9), version: 0.4.3 2025-10-10T06:02:16,068 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/d6/23/65b9b159bb7ce397543c9a6c83cf588b155c1cd5118358a83a0dddbd9e3a/pytom_match_pick-0.4.3-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,069 Found link https://files.pythonhosted.org/packages/a9/98/b37b5169d6578a229cad35fd4a5ee9d7d7cfca67c0b0ad051f6e0679b325/pytom-match-pick-0.5.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9), version: 0.5.0 2025-10-10T06:02:16,070 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/77/6b/be3e904b90ef18f7d278bf93f342204825ebf626297fff0120b90c285def/pytom_match_pick-0.5.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,071 Found link https://files.pythonhosted.org/packages/27/c2/bf63df003e0bc960ae914788abdbfdc50b7f801dbe0bebb1236e0fd2a71c/pytom-match-pick-0.6.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9), version: 0.6.0 2025-10-10T06:02:16,072 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/cd/a4/9d13299f41e923277c5261898b88f793393f75e512d58509fc185a824828/pytom_match_pick-0.6.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,073 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/b3/14/7cf120f1678587bde0a854121312a9d4ca1eec5def50edff56eefeff2d42/pytom_match_pick-0.7.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,074 Found link https://files.pythonhosted.org/packages/0d/13/75f2a190e7434d5cc1b193139ed4e818a81d7a68b1388da188b248e0aa58/pytom_match_pick-0.7.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9), version: 0.7.0 2025-10-10T06:02:16,074 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/47/41/02ad9fdfbf3dfeb1530031e448fba60b28c13f15aa5663a138c138f8bac2/pytom_match_pick-0.7.1-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,076 Found link https://files.pythonhosted.org/packages/0d/a4/250695551905248a2ce2bf7a76cd69bfbe2ed80fee05e62ab13b5de941bd/pytom_match_pick-0.7.1.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9), version: 0.7.1 2025-10-10T06:02:16,076 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/bb/de/51e9eb2d055f6b70a6ea099a59cfa586f6d17de28674f78d949e1fd4225e/pytom_match_pick-0.7.2-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,077 Found link https://files.pythonhosted.org/packages/36/9c/9f0a11730f0229e5020ae05ee38e8be530f7deae3e09958e742c3d4b130b/pytom_match_pick-0.7.2.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.9), version: 0.7.2 2025-10-10T06:02:16,078 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/8e/e6/cfca08f6da41747f052f5ed80ef9251d8819a40c16607c59b408c39308aa/pytom_match_pick-0.7.8-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,079 Found link https://files.pythonhosted.org/packages/dc/22/f37ede1560078567bab299973ffdb47dca195964f00bf51d738171580f90/pytom_match_pick-0.7.8.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.7.8 2025-10-10T06:02:16,080 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/7d/2c/ba4cf9c7d54dfa35619f9e69502ac6254cbd222089e0ca2168327ef5a0bd/pytom_match_pick-0.7.9-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,081 Found link https://files.pythonhosted.org/packages/c4/be/0c5d387b4a3abf34944d46e033e4e989e7dc337570738822d3520ff21379/pytom_match_pick-0.7.9.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.7.9 2025-10-10T06:02:16,081 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/93/1b/b42104dde349464c6e9fa413a3694aff98e957d782184d75c3eeb2f0a66f/pytom_match_pick-0.7.10-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,082 Found link https://files.pythonhosted.org/packages/29/65/a35d7764ed9f9605592005751dd1c7749f815f3f009c71c59eaac9a5f409/pytom_match_pick-0.7.10.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.7.10 2025-10-10T06:02:16,083 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/69/22/3c32fb46f689ee65dc64fc1eb9f39d14b28785224236ff758857a9ef1806/pytom_match_pick-0.7.11-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,084 Found link https://files.pythonhosted.org/packages/2e/f2/b23ed374e4256b1cabad9a5914bf5e4fdca8d0a3a7431867cda12b897621/pytom_match_pick-0.7.11.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.7.11 2025-10-10T06:02:16,085 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/7e/d5/adec8d12669829ef37648569d5f6997a2ea3ab1ff3e525bf7fe83b291cee/pytom_match_pick-0.8.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,086 Found link https://files.pythonhosted.org/packages/1e/b4/47edffa0d3c98612b5090be821c4a672a9e217ac47318615941301329965/pytom_match_pick-0.8.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.8.0 2025-10-10T06:02:16,087 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/95/f9/1cd133200aec75733b9091373ffa0570f42637dcf477fd545cc0848d8371/pytom_match_pick-0.9.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,088 Found link https://files.pythonhosted.org/packages/36/eb/10652a1e5c9d66922231978831c351bf21a0f815c0a4798fc41b48b970a1/pytom_match_pick-0.9.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.10), version: 0.9.0 2025-10-10T06:02:16,089 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/ef/7d/f5eb0e6da88b7a73bea9e410cb8c798cfab7272a586f3c83fe6c661b9b2d/pytom_match_pick-0.10.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2025-10-10T06:02:16,090 Found link https://files.pythonhosted.org/packages/7a/21/ffe14c7369dcb3e4b6a3528d87a7db848184e7847ade39f04b0e318b5c45/pytom_match_pick-0.10.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.10.0 2025-10-10T06:02:16,091 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/06/60/6b7173e6087bd5ba2e96e1b0d33fef499e15393c7c386d4324af8a51b6a9/pytom_match_pick-0.11.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2025-10-10T06:02:16,092 Found link https://files.pythonhosted.org/packages/9a/b1/c2fec81e88d8f1b71b25e4b0a099bee6ddf369de023eb5bec375857d872d/pytom_match_pick-0.11.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.11.0 2025-10-10T06:02:16,092 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/0d/f7/11c1363049661abcd70765e29eb667e54f027271dd2e4cb1d289cb1d60a4/pytom_match_pick-0.11.1-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2025-10-10T06:02:16,093 Found link https://files.pythonhosted.org/packages/80/db/6d062fb6fb8652bd11d22fda1d5d2f98deb2a0b66eb65ae9abf4d1678164/pytom_match_pick-0.11.1.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.11.1 2025-10-10T06:02:16,094 Skipping link: No binaries permitted for pytom-match-pick: https://files.pythonhosted.org/packages/d1/20/8a7a63294877a5cf0711a4098b1ebc712dccccf0ec2a58e74df4f3b8b9a3/pytom_match_pick-0.12.0-py3-none-any.whl (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2025-10-10T06:02:16,095 Found link https://files.pythonhosted.org/packages/88/5a/3ace00117d1b748bbd1a01824ed639fc7e139b26123f42f983b9973b8eb3/pytom_match_pick-0.12.0.tar.gz (from https://pypi.org/simple/pytom-match-pick/) (requires-python:>=3.11), version: 0.12.0 2025-10-10T06:02:16,096 Fetching project page and analyzing links: https://www.piwheels.org/simple/pytom-match-pick/ 2025-10-10T06:02:16,097 Getting page https://www.piwheels.org/simple/pytom-match-pick/ 2025-10-10T06:02:16,099 Found index url https://www.piwheels.org/simple 2025-10-10T06:02:16,295 Fetched page https://www.piwheels.org/simple/pytom-match-pick/ as text/html 2025-10-10T06:02:16,300 Skipping link: No binaries permitted for pytom-match-pick: https://www.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.11.1-py3-none-any.whl#sha256=9ea3ce41a376085ea1395999ed7ea2a93ecabdf5fa1de70b2d0ff9b9a545df3b (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2025-10-10T06:02:16,301 Skipping link: No binaries permitted for pytom-match-pick: https://www.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.11.0-py3-none-any.whl#sha256=69ee84d80e42e7007e4b77f690fecdf9f8367bc21076bba7525160b5f93240e6 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2025-10-10T06:02:16,302 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.10.0-py3-none-any.whl#sha256=f2024a5c58429dc3720fce8c6b77a2fe70b87172a93e37424645189bd4a7b9f4 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.11) 2025-10-10T06:02:16,303 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.9.0-py3-none-any.whl#sha256=d43a4f2de828aa00b8f286422fa98e91f58a3d73963f9b00005496a0b3bdbe61 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,303 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.8.0-py3-none-any.whl#sha256=f5a77bb5f3196d3e9cc4106b2420679870b3c7a9af90981292cb60ac3fdd174b (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,304 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.11-py3-none-any.whl#sha256=fcb7aae2a3c96808d8ee28280ce461c4a775cd7964fb773eaca9b4af86a83143 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,305 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.10-py3-none-any.whl#sha256=1183393d6aed62cde728d37b90414042b27ba82dd790df84f6979e3365e08fe8 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,305 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.9-py3-none-any.whl#sha256=639e02b69aeec2003b13859cca7e0507b6caf80c313d7c42f91b442c3ce4b309 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,306 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.8-py3-none-any.whl#sha256=9a98212565828f7fca31fcd28d027d1fcb33254fee47991168ab354d240e22b6 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.10) 2025-10-10T06:02:16,306 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.2-py3-none-any.whl#sha256=3db888a58c6dd08f07f4c785bd0f06910b7dfd23843b96a96e90a53597fe9b81 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,307 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.1-py3-none-any.whl#sha256=2d8c4573029bbf0c16a1bb6d747c8131ac8e8c2f6f87ae7c94ff5f5271a43a16 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,308 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.7.0-py3-none-any.whl#sha256=a252bdbc4e0df9a4417b30e3a0f8a1d894feb7ce0f106717dd019fbfff9eed43 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,309 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.6.0-py3-none-any.whl#sha256=e37348bec06b4b7a2f06b2904dba5cfc3485a84dfbfb73a61ab9c49dbe60aa08 (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,309 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.5.0-py3-none-any.whl#sha256=929ad4bcee62521a0e83bc99688468940d4a6fcf362c71a9c8d14320e0f1ba0c (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,310 Skipping link: No binaries permitted for pytom-match-pick: https://archive1.piwheels.org/simple/pytom-match-pick/pytom_match_pick-0.4.3-py3-none-any.whl#sha256=69aeea6091ab5fb0f7e1a58bfe86631c6c71e95d296b7e55b12701cc1fd02e7a (from https://www.piwheels.org/simple/pytom-match-pick/) (requires-python:>=3.9) 2025-10-10T06:02:16,311 Skipping link: not a file: https://www.piwheels.org/simple/pytom-match-pick/ 2025-10-10T06:02:16,311 Skipping link: not a file: https://pypi.org/simple/pytom-match-pick/ 2025-10-10T06:02:16,335 Given no hashes to check 1 links for project 'pytom-match-pick': discarding no candidates 2025-10-10T06:02:16,354 Collecting pytom-match-pick==0.12.0 2025-10-10T06:02:16,356 Created temporary directory: /tmp/pip-unpack-heb2ny8z 2025-10-10T06:02:16,510 Downloading pytom_match_pick-0.12.0.tar.gz (101 kB) 2025-10-10T06:02:16,686 Added pytom-match-pick==0.12.0 from https://files.pythonhosted.org/packages/88/5a/3ace00117d1b748bbd1a01824ed639fc7e139b26123f42f983b9973b8eb3/pytom_match_pick-0.12.0.tar.gz to build tracker '/tmp/pip-build-tracker-6thkycqn' 2025-10-10T06:02:16,692 Created temporary directory: /tmp/pip-build-env-_f3uyueg 2025-10-10T06:02:16,696 Installing build dependencies: started 2025-10-10T06:02:16,698 Running command pip subprocess to install build dependencies 2025-10-10T06:02:17,922 Using pip 23.0.1 from /usr/lib/python3/dist-packages/pip (python 3.11) 2025-10-10T06:02:18,595 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2025-10-10T06:02:18,619 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2025-10-10T06:02:20,528 Collecting setuptools 2025-10-10T06:02:20,626 Using cached https://www.piwheels.org/simple/setuptools/setuptools-80.9.0-py3-none-any.whl (1.2 MB) 2025-10-10T06:02:24,023 Installing collected packages: setuptools 2025-10-10T06:02:27,867 Successfully installed setuptools-80.9.0 2025-10-10T06:02:28,180 Installing build dependencies: finished with status 'done' 2025-10-10T06:02:28,187 Getting requirements to build wheel: started 2025-10-10T06:02:28,188 Running command Getting requirements to build wheel 2025-10-10T06:02:28,859 `pytom_tm.entry_points:estimate_roc [plotting]` - using extras for entry points is not recommended 2025-10-10T06:02:28,865 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-10-10T06:02:28,865 !! 2025-10-10T06:02:28,867 ******************************************************************************** 2025-10-10T06:02:28,867 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-10-10T06:02:28,869 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-10-10T06:02:28,869 or your builds will no longer be supported. 2025-10-10T06:02:28,871 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:28,871 ******************************************************************************** 2025-10-10T06:02:28,872 !! 2025-10-10T06:02:28,873 corresp(dist, value, root_dir) 2025-10-10T06:02:28,969 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-10T06:02:28,970 !! 2025-10-10T06:02:28,971 ******************************************************************************** 2025-10-10T06:02:28,972 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-10T06:02:28,973 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2025-10-10T06:02:28,975 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:28,975 ******************************************************************************** 2025-10-10T06:02:28,977 !! 2025-10-10T06:02:28,977 dist._finalize_license_expression() 2025-10-10T06:02:28,978 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-10T06:02:28,979 !! 2025-10-10T06:02:28,980 ******************************************************************************** 2025-10-10T06:02:28,980 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-10T06:02:28,981 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2025-10-10T06:02:28,982 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:28,983 ******************************************************************************** 2025-10-10T06:02:28,984 !! 2025-10-10T06:02:28,984 self._finalize_license_expression() 2025-10-10T06:02:28,985 running egg_info 2025-10-10T06:02:28,992 writing src/pytom_match_pick.egg-info/PKG-INFO 2025-10-10T06:02:29,001 writing dependency_links to src/pytom_match_pick.egg-info/dependency_links.txt 2025-10-10T06:02:29,004 writing entry points to src/pytom_match_pick.egg-info/entry_points.txt 2025-10-10T06:02:29,008 writing requirements to src/pytom_match_pick.egg-info/requires.txt 2025-10-10T06:02:29,010 writing top-level names to src/pytom_match_pick.egg-info/top_level.txt 2025-10-10T06:02:29,036 reading manifest file 'src/pytom_match_pick.egg-info/SOURCES.txt' 2025-10-10T06:02:29,040 reading manifest template 'MANIFEST.in' 2025-10-10T06:02:29,041 adding license file 'LICENSE' 2025-10-10T06:02:29,046 writing manifest file 'src/pytom_match_pick.egg-info/SOURCES.txt' 2025-10-10T06:02:29,157 Getting requirements to build wheel: finished with status 'done' 2025-10-10T06:02:29,160 Created temporary directory: /tmp/pip-modern-metadata-x9is7_wc 2025-10-10T06:02:29,163 Preparing metadata (pyproject.toml): started 2025-10-10T06:02:29,164 Running command Preparing metadata (pyproject.toml) 2025-10-10T06:02:29,796 `pytom_tm.entry_points:estimate_roc [plotting]` - using extras for entry points is not recommended 2025-10-10T06:02:29,802 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-10-10T06:02:29,803 !! 2025-10-10T06:02:29,804 ******************************************************************************** 2025-10-10T06:02:29,804 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-10-10T06:02:29,805 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-10-10T06:02:29,806 or your builds will no longer be supported. 2025-10-10T06:02:29,807 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:29,808 ******************************************************************************** 2025-10-10T06:02:29,809 !! 2025-10-10T06:02:29,809 corresp(dist, value, root_dir) 2025-10-10T06:02:29,902 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-10T06:02:29,903 !! 2025-10-10T06:02:29,904 ******************************************************************************** 2025-10-10T06:02:29,905 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-10T06:02:29,906 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2025-10-10T06:02:29,909 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:29,910 ******************************************************************************** 2025-10-10T06:02:29,912 !! 2025-10-10T06:02:29,912 dist._finalize_license_expression() 2025-10-10T06:02:29,913 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-10T06:02:29,913 !! 2025-10-10T06:02:29,914 ******************************************************************************** 2025-10-10T06:02:29,915 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-10T06:02:29,916 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2025-10-10T06:02:29,917 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:29,918 ******************************************************************************** 2025-10-10T06:02:29,919 !! 2025-10-10T06:02:29,919 self._finalize_license_expression() 2025-10-10T06:02:29,920 running dist_info 2025-10-10T06:02:29,934 creating /tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info 2025-10-10T06:02:29,935 writing /tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info/PKG-INFO 2025-10-10T06:02:29,945 writing dependency_links to /tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info/dependency_links.txt 2025-10-10T06:02:29,947 writing entry points to /tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info/entry_points.txt 2025-10-10T06:02:29,951 writing requirements to /tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info/requires.txt 2025-10-10T06:02:29,953 writing top-level names to /tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info/top_level.txt 2025-10-10T06:02:29,954 writing manifest file '/tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info/SOURCES.txt' 2025-10-10T06:02:29,978 reading manifest file '/tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info/SOURCES.txt' 2025-10-10T06:02:29,980 reading manifest template 'MANIFEST.in' 2025-10-10T06:02:29,981 adding license file 'LICENSE' 2025-10-10T06:02:29,986 writing manifest file '/tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick.egg-info/SOURCES.txt' 2025-10-10T06:02:29,987 creating '/tmp/pip-modern-metadata-x9is7_wc/pytom_match_pick-0.12.0.dist-info' 2025-10-10T06:02:30,139 Preparing metadata (pyproject.toml): finished with status 'done' 2025-10-10T06:02:30,148 Source in /tmp/pip-wheel-peda1ur5/pytom-match-pick_b02d66eb1c854571a54fd633ce3adeb7 has version 0.12.0, which satisfies requirement pytom-match-pick==0.12.0 from https://files.pythonhosted.org/packages/88/5a/3ace00117d1b748bbd1a01824ed639fc7e139b26123f42f983b9973b8eb3/pytom_match_pick-0.12.0.tar.gz 2025-10-10T06:02:30,149 Removed pytom-match-pick==0.12.0 from https://files.pythonhosted.org/packages/88/5a/3ace00117d1b748bbd1a01824ed639fc7e139b26123f42f983b9973b8eb3/pytom_match_pick-0.12.0.tar.gz from build tracker '/tmp/pip-build-tracker-6thkycqn' 2025-10-10T06:02:30,163 Created temporary directory: /tmp/pip-unpack-6c7apqyk 2025-10-10T06:02:30,163 Building wheels for collected packages: pytom-match-pick 2025-10-10T06:02:30,168 Created temporary directory: /tmp/pip-wheel-c29q57e_ 2025-10-10T06:02:30,169 Destination directory: /tmp/pip-wheel-c29q57e_ 2025-10-10T06:02:30,171 Building wheel for pytom-match-pick (pyproject.toml): started 2025-10-10T06:02:30,172 Running command Building wheel for pytom-match-pick (pyproject.toml) 2025-10-10T06:02:30,790 `pytom_tm.entry_points:estimate_roc [plotting]` - using extras for entry points is not recommended 2025-10-10T06:02:30,797 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated 2025-10-10T06:02:30,797 !! 2025-10-10T06:02:30,799 ******************************************************************************** 2025-10-10T06:02:30,800 Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). 2025-10-10T06:02:30,801 By 2026-Feb-18, you need to update your project and remove deprecated calls 2025-10-10T06:02:30,802 or your builds will no longer be supported. 2025-10-10T06:02:30,803 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:30,803 ******************************************************************************** 2025-10-10T06:02:30,804 !! 2025-10-10T06:02:30,805 corresp(dist, value, root_dir) 2025-10-10T06:02:30,894 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-10T06:02:30,895 !! 2025-10-10T06:02:30,896 ******************************************************************************** 2025-10-10T06:02:30,897 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-10T06:02:30,898 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2025-10-10T06:02:30,899 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:30,899 ******************************************************************************** 2025-10-10T06:02:30,900 !! 2025-10-10T06:02:30,901 dist._finalize_license_expression() 2025-10-10T06:02:30,901 /tmp/pip-build-env-_f3uyueg/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. 2025-10-10T06:02:30,902 !! 2025-10-10T06:02:30,903 ******************************************************************************** 2025-10-10T06:02:30,904 Please consider removing the following classifiers in favor of a SPDX license expression: 2025-10-10T06:02:30,905 License :: OSI Approved :: GNU General Public License v2 (GPLv2) 2025-10-10T06:02:30,906 See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. 2025-10-10T06:02:30,907 ******************************************************************************** 2025-10-10T06:02:30,908 !! 2025-10-10T06:02:30,909 self._finalize_license_expression() 2025-10-10T06:02:30,909 running bdist_wheel 2025-10-10T06:02:30,931 running build 2025-10-10T06:02:30,931 running build_py 2025-10-10T06:02:30,939 creating build/lib/pytom_tm 2025-10-10T06:02:30,942 copying src/pytom_tm/tmjob.py -> build/lib/pytom_tm 2025-10-10T06:02:30,945 copying src/pytom_tm/json.py -> build/lib/pytom_tm 2025-10-10T06:02:30,947 copying src/pytom_tm/merge_stars.py -> build/lib/pytom_tm 2025-10-10T06:02:30,949 copying src/pytom_tm/entry_points.py -> build/lib/pytom_tm 2025-10-10T06:02:30,952 copying src/pytom_tm/template.py -> build/lib/pytom_tm 2025-10-10T06:02:30,955 copying src/pytom_tm/matching.py -> build/lib/pytom_tm 2025-10-10T06:02:30,957 copying src/pytom_tm/plotting.py -> build/lib/pytom_tm 2025-10-10T06:02:30,960 copying src/pytom_tm/correlation.py -> build/lib/pytom_tm 2025-10-10T06:02:30,962 copying src/pytom_tm/extract.py -> build/lib/pytom_tm 2025-10-10T06:02:30,966 copying src/pytom_tm/dataclass.py -> build/lib/pytom_tm 2025-10-10T06:02:30,969 copying src/pytom_tm/__init__.py -> build/lib/pytom_tm 2025-10-10T06:02:30,971 copying src/pytom_tm/angles.py -> build/lib/pytom_tm 2025-10-10T06:02:30,974 copying src/pytom_tm/weights.py -> build/lib/pytom_tm 2025-10-10T06:02:30,977 copying src/pytom_tm/mask.py -> build/lib/pytom_tm 2025-10-10T06:02:30,979 copying src/pytom_tm/utils.py -> build/lib/pytom_tm 2025-10-10T06:02:30,981 copying src/pytom_tm/io.py -> build/lib/pytom_tm 2025-10-10T06:02:30,984 copying src/pytom_tm/parallel.py -> build/lib/pytom_tm 2025-10-10T06:02:30,987 running egg_info 2025-10-10T06:02:31,001 writing src/pytom_match_pick.egg-info/PKG-INFO 2025-10-10T06:02:31,009 writing dependency_links to src/pytom_match_pick.egg-info/dependency_links.txt 2025-10-10T06:02:31,011 writing entry points to src/pytom_match_pick.egg-info/entry_points.txt 2025-10-10T06:02:31,014 writing requirements to src/pytom_match_pick.egg-info/requires.txt 2025-10-10T06:02:31,015 writing top-level names to src/pytom_match_pick.egg-info/top_level.txt 2025-10-10T06:02:31,027 reading manifest file 'src/pytom_match_pick.egg-info/SOURCES.txt' 2025-10-10T06:02:31,031 reading manifest template 'MANIFEST.in' 2025-10-10T06:02:31,032 adding license file 'LICENSE' 2025-10-10T06:02:31,037 writing manifest file 'src/pytom_match_pick.egg-info/SOURCES.txt' 2025-10-10T06:02:31,054 installing to build/bdist.linux-armv7l/wheel 2025-10-10T06:02:31,055 running install 2025-10-10T06:02:31,083 running install_lib 2025-10-10T06:02:31,090 creating build/bdist.linux-armv7l/wheel 2025-10-10T06:02:31,093 creating build/bdist.linux-armv7l/wheel/pytom_tm 2025-10-10T06:02:31,095 copying build/lib/pytom_tm/tmjob.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,101 copying build/lib/pytom_tm/json.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,106 copying build/lib/pytom_tm/merge_stars.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,111 copying build/lib/pytom_tm/entry_points.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,124 copying build/lib/pytom_tm/template.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,133 copying build/lib/pytom_tm/matching.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,139 copying build/lib/pytom_tm/plotting.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,146 copying build/lib/pytom_tm/correlation.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,158 copying build/lib/pytom_tm/extract.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,170 copying build/lib/pytom_tm/dataclass.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,184 copying build/lib/pytom_tm/__init__.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,194 copying build/lib/pytom_tm/angles.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,198 copying build/lib/pytom_tm/weights.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,201 copying build/lib/pytom_tm/mask.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,203 copying build/lib/pytom_tm/utils.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,205 copying build/lib/pytom_tm/io.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,208 copying build/lib/pytom_tm/parallel.py -> build/bdist.linux-armv7l/wheel/./pytom_tm 2025-10-10T06:02:31,210 running install_egg_info 2025-10-10T06:02:31,217 Copying src/pytom_match_pick.egg-info to build/bdist.linux-armv7l/wheel/./pytom_match_pick-0.12.0-py3.11.egg-info 2025-10-10T06:02:31,231 running install_scripts 2025-10-10T06:02:31,246 creating build/bdist.linux-armv7l/wheel/pytom_match_pick-0.12.0.dist-info/WHEEL 2025-10-10T06:02:31,249 creating '/tmp/pip-wheel-c29q57e_/.tmp-qamogkz1/pytom_match_pick-0.12.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2025-10-10T06:02:31,255 adding 'pytom_match_pick-0.12.0.dist-info/licenses/LICENSE' 2025-10-10T06:02:31,257 adding 'pytom_tm/__init__.py' 2025-10-10T06:02:31,259 adding 'pytom_tm/angles.py' 2025-10-10T06:02:31,261 adding 'pytom_tm/correlation.py' 2025-10-10T06:02:31,263 adding 'pytom_tm/dataclass.py' 2025-10-10T06:02:31,268 adding 'pytom_tm/entry_points.py' 2025-10-10T06:02:31,271 adding 'pytom_tm/extract.py' 2025-10-10T06:02:31,275 adding 'pytom_tm/io.py' 2025-10-10T06:02:31,276 adding 'pytom_tm/json.py' 2025-10-10T06:02:31,278 adding 'pytom_tm/mask.py' 2025-10-10T06:02:31,281 adding 'pytom_tm/matching.py' 2025-10-10T06:02:31,283 adding 'pytom_tm/merge_stars.py' 2025-10-10T06:02:31,284 adding 'pytom_tm/parallel.py' 2025-10-10T06:02:31,287 adding 'pytom_tm/plotting.py' 2025-10-10T06:02:31,289 adding 'pytom_tm/template.py' 2025-10-10T06:02:31,295 adding 'pytom_tm/tmjob.py' 2025-10-10T06:02:31,296 adding 'pytom_tm/utils.py' 2025-10-10T06:02:31,300 adding 'pytom_tm/weights.py' 2025-10-10T06:02:31,305 adding 'pytom_match_pick-0.12.0.dist-info/METADATA' 2025-10-10T06:02:31,307 adding 'pytom_match_pick-0.12.0.dist-info/WHEEL' 2025-10-10T06:02:31,308 adding 'pytom_match_pick-0.12.0.dist-info/entry_points.txt' 2025-10-10T06:02:31,309 adding 'pytom_match_pick-0.12.0.dist-info/top_level.txt' 2025-10-10T06:02:31,310 adding 'pytom_match_pick-0.12.0.dist-info/RECORD' 2025-10-10T06:02:31,312 removing build/bdist.linux-armv7l/wheel 2025-10-10T06:02:31,440 Building wheel for pytom-match-pick (pyproject.toml): finished with status 'done' 2025-10-10T06:02:31,446 Created wheel for pytom-match-pick: filename=pytom_match_pick-0.12.0-py3-none-any.whl size=79330 sha256=493a8f47e01e5997ece45c04f911aefb36978a88016bd5318000f8f6427b8a35 2025-10-10T06:02:31,448 Stored in directory: /tmp/pip-ephem-wheel-cache-ckynwmj7/wheels/8e/0a/14/634de98cd044e54271d5bda4cd04a769bc0815f5cf22eefe56 2025-10-10T06:02:31,474 Successfully built pytom-match-pick 2025-10-10T06:02:31,479 Removed build tracker: '/tmp/pip-build-tracker-6thkycqn'